chr1	918449	918555	918505	Y	NA	NOC2L,KLHL17,PLEKHN1,HES4,ISG15,AGRN	NA	NA	NA	NA	HES4	14997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	936652	937138	936860	Y	NA	NOC2L,KLHL17,PLEKHN1,HES4,ISG15,AGRN	C1orf170	K562	ChIA-PET	22265404	HES4	3100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	941791	942135	942082	Y	HES4	NOC2L,KLHL17,PLEKHN1,HES4,ISG15,AGRN	ISG15,AGRN	K562,MCF7	ChIA-PET	22265404	ISG15	4668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr1	945769	946034	945890	Y	CCNL2,ATAD3B	PLEKHN1,HES4,ISG15,AGRN,RP11-465B22.3	NA	NA	NA	NA	ISG15	769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	956563	956812	956665	Y	UBE2J2,PUSL1,GLTPD1,DVL1,CPSF3L,C1orf159,AURKAIP1,AURKAIP1,AURKAIP1,ATAD3A,ATAD3A,NOC2L,PLEKHN1,ISG15,AGRN	HES4,ISG15,AGRN,RP11-465B22.3	NA	NA	NA	NA	AGRN	3060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	993498	993878	993664	Y	NA	ISG15,AGRN,RP11-465B22.3,RNF223	NA	NA	NA	NA	RP11-465B22.3	384	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18989917441887
chr1	994198	994452	994303	Y	NA	ISG15,AGRN,RP11-465B22.3,RNF223	NA	NA	NA	NA	RP11-465B22.3	1084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	1004646	1004986	1004766	Y	NA	RP11-465B22.3,RNF223,C1orf159	NA	NA	NA	NA	RNF223	2701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr1	1014834	1015095	1014859	Y	NA	RP11-465B22.3,RNF223,C1orf159	RNF223	MCF7,K562	ChIA-PET	22265404	RNF223	7147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	1060905	1061095	1061000	Y	RNF223	C1orf159	MIR429,MIR200B,MIR200A,ACAP3,SCNN1D,B3GALT6,SDF4,UBE2J2,C1orf159	MCF7,K562	ChIA-PET	22265404	C1orf159	11164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr1	1063914	1064111	1063979	Y	AGRN,VWA1	C1orf159	B3GALT6,SDF4,C1orf159,TNFRSF18,TTLL10,TNFRSF4,LOC254099,ACAP3,UBE2J2,SCNN1D,PLEKHN1,C1orf170,AGRN,ISG15,RNF223	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	C1orf159	14173	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.76799392675197
chr1	1173386	1173736	1173661	Y	PLEKHN1	SDF4,B3GALT6,UBE2J2	NA	NA	NA	NA	B3GALT6	7757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr1	1283060	1283625	1283139	Y	NA	PUSL1,ACAP3,CPSF3L,GLTPD1,TAS1R3,DVL1,MXRA8,AURKAIP1,CCNL2,RP4-758J18.2	NA	NA	NA	NA	DVL1	330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.568162523820028
chr1	1295535	1296332	1296026	Y	MIB2,CCNL2,C1orf70,ACAP3,MXRA8	CPSF3L,GLTPD1,TAS1R3,DVL1,MXRA8,AURKAIP1,CCNL2,RP4-758J18.2,MRPL20	NA	NA	NA	NA	MXRA8	378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr1	1343359	1343768	1343546	Y	NA	MXRA8,AURKAIP1,CCNL2,RP4-758J18.2,MRPL20,RP4-758J18.7,ANKRD65,TMEM88B,VWA1,ATAD3C	NA	NA	NA	NA	MRPL20	2666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr1	1368471	1368786	1368620	Y	RNF223,DVL1,NADK,LOC441869,TMEM88B,VWA1	CCNL2,RP4-758J18.2,MRPL20,RP4-758J18.7,ANKRD65,TMEM88B,VWA1,ATAD3C,ATAD3B	NA	NA	NA	NA	VWA1	230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.909846435344802
chr1	1708824	1709349	1708980	Y	NA	SLC35E2,NADK	NA	NA	NA	NA	NADK	547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	1744250	1744609	1744432	Y	NA	NADK	NA	NA	NA	NA	NADK	34354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	1793829	1793862	1793845	Y	CDK11B,CDK11A	GNB1	NA	NA	NA	NA	GNB1	26633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	1803114	1803303	1803274	Y	NA	GNB1,TMEM52	NADK	IMR90	Hi-C	24141950	GNB1	17192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	1814762	1815124	1815035	Y	SKI,C1orf86,MIB2	GNB1,TMEM52	NA	NA	NA	NA	GNB1	5371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	1840449	1840835	1840668	Y	SKI,ATAD3B,C1orf70,MIB2,MIB2,PRKCZ,GABRD	GNB1,TMEM52	NA	NA	NA	NA	TMEM52	7877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.329524472220747
chr1	1978731	1978937	1978887	Y	NADK,PRKCZ	NA	NA	NA	NA	NA	TMEM52	130019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.567339880827444
chr1	2135885	2136186	2135927	Y	NA	C1orf86	NA	NA	NA	NA	C1orf86	5973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	2140151	2140337	2140252	Y	C1orf86	C1orf86	NA	NA	NA	NA	C1orf86	1822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	2172142	2172385	2172270	Y	NADK,GNB1,TNFRSF14,PANK4,SKI	C1orf86	NA	NA	NA	NA	C1orf86	29983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	2245775	2246116	2245876	Y	NA	NA	NA	NA	NA	NA	MORN1	75030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	2246556	2246763	2246722	Y	SKI	NA	NA	NA	NA	NA	MORN1	74383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	2477415	2477971	2477660	Y	NA	PANK4,HES5,TNFRSF14,RP3-395M20.8,FAM213B	NA	NA	NA	NA	TNFRSF14	7107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.31883939982634
chr1	2509702	2510198	2509855	Y	SKI,TNFRSF14	TNFRSF14,RP3-395M20.8,FAM213B	NA	NA	NA	NA	FAM213B	5732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr1	2574343	2574764	2574705	Y	MORN1,PANK4,ACTRT2,MMEL1	NA	NA	NA	NA	NA	FAM213B	58413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.933513590035821
chr1	3086923	3087330	3087113	Y	PRDM16	NA	NA	NA	NA	NA	PRDM16	103191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	3136013	3136207	3136056	Y	ARHGEF16,PRDM16	NA	NA	NA	NA	NA	PRDM16	152281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.714268868812676
chr1	3229711	3230157	3229865	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	138833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	3231111	3231335	3231228	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	137655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	3232812	3232866	3232839	Y	PRDM16	NA	NA	NA	NA	NA	ARHGEF16	136124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	3237165	3237518	3237290	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	131472	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.4549638622843
chr1	3243464	3243615	3243540	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	125375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285641344161008
chr1	3251760	3252019	3251890	Y	NA	NA	NA	NA	NA	NA	ARHGEF16	116971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.556494710688274
chr1	3267475	3267612	3267544	Y	PRDM16	NA	NA	NA	NA	NA	ARHGEF16	101378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	3373716	3374006	3373818	Y	NA	ARHGEF16	NA	NA	NA	NA	ARHGEF16	4726	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.1916056045382
chr1	3374928	3375314	3374967	Y	NA	ARHGEF16	NA	NA	NA	NA	ARHGEF16	5938	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.93030363850752
chr1	3377166	3377446	3377320	Y	NA	ARHGEF16	NA	NA	NA	NA	ARHGEF16	8176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	3398864	3399114	3399029	Y	NA	ARHGEF16	NA	NA	NA	NA	ARHGEF16	29874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	3817648	3818071	3817969	Y	LRRC47	CEP104,DFFB,C1orf174	NA	NA	NA	NA	C1orf174	2791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.798744041354617
chr1	4327537	4327841	4327648	Y	NA	NA	NA	NA	NA	NA	C1orf174	512680	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.76972951137065
chr1	5957166	5957512	5957348	Y	KCNAB2,KCNAB2,CHD5	NA	NA	NA	NA	NA	KCNAB2	92014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	6230950	6231173	6231057	Y	PLEKHG5,KCNAB2,KCNAB2,CHD5	RNF207,RPL22	NA	NA	NA	NA	RNF207	32362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	6341896	6342142	6342067	Y	GPR153,ACOT7	ICMT,GPR153	NA	NA	NA	NA	GPR153	22861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	6661008	6661639	6661311	Y	ZBTB48,KLHL21	NOL9,TAS1R1,ZBTB48,PHF13,KLHL21,THAP3	NA	NA	NA	NA	PHF13	10106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr1	6709089	6709221	6709155	Y	NA	PHF13,KLHL21,THAP3	NA	NA	NA	NA	THAP3	26163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	6760819	6760983	6760901	Y	NA	DNAJC11	NA	NA	NA	NA	DNAJC11	835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	6943772	6944262	6943813	Y	NA	NA	NA	NA	NA	NA	CAMTA1	100388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	7313313	7313451	7313382	Y	NA	RNU1-8P	NA	NA	NA	NA	RNU1-8P	35893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	7764543	7764931	7764717	Y	PER3	NA	NA	NA	NA	NA	VAMP3	64398	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.01903264744927
chr1	7813654	7813829	7813742	Y	NA	VAMP3,PER3	NA	NA	NA	NA	VAMP3	15500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	7843556	7843653	7843585	Y	PER3	VAMP3,PER3	NA	NA	NA	NA	PER3	1176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	8054249	8054565	8054423	Y	NA	PARK7,ERRFI1,RP11-431K24.1	NA	NA	NA	NA	ERRFI1	29803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	8070132	8070398	8070299	Y	PER3,SLC45A1,ERRFI1	ERRFI1,RP11-431K24.1	NA	NA	NA	NA	ERRFI1	13970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr1	8076289	8076986	8076888	Y	NA	ERRFI1,RP11-431K24.1	NA	NA	NA	NA	ERRFI1	7382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	8121436	8121582	8121497	Y	ERRFI1	ERRFI1,RP11-431K24.1	RERE,ERRFI1,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	36638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8137301	8137521	8137361	Y	NA	NA	ERRFI1,PARK7,TNFRSF9,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	52503	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.50447608286831
chr1	8154517	8154933	8154754	Y	VAMP3	NA	ERRFI1,RERE,PARK7,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	69719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	8156648	8157003	8156918	Y	VAMP3	NA	ERRFI1,RERE,SLC45A1,PARK7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	71850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	8157417	8157780	8157543	Y	NA	NA	ERRFI1,RERE,SLC45A1,PARK7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-431K24.1	72619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.364036797050936
chr1	8181009	8181247	8181098	Y	NA	NA	ERRFI1,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	83410	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.17938553270721
chr1	8187563	8187834	8187771	Y	VAMP3,TNFRSF9	NA	ERRFI1,SLC45A1,RERE	IMR90	Hi-C	24141950	RNU1-7P	76823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	8198088	8198334	8198235	Y	NA	NA	ERRFI1,SLC45A1,RERE,PARK7	IMR90	Hi-C	24141950	RNU1-7P	66323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	8214748	8215059	8214907	Y	ERRFI1	RNU1-7P	ERRFI1,SLC45A1,PARK7	IMR90	Hi-C	24141950	RNU1-7P	49598	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18152244486466
chr1	8215795	8215905	8215839	Y	NA	RNU1-7P	ERRFI1,SLC45A1,PARK7	IMR90	Hi-C	24141950	RNU1-7P	48752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.656911520676853
chr1	8229904	8230047	8229996	Y	NA	RNU1-7P	ERRFI1,SLC45A1	IMR90	Hi-C	24141950	RNU1-7P	34610	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.49871604709862
chr1	8230370	8230423	8230397	Y	ERRFI1	RNU1-7P	ERRFI1,SLC45A1	IMR90	Hi-C	24141950	RNU1-7P	34234	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.329524472220747
chr1	8250099	8250155	8250127	Y	NA	RNU1-7P	ERRFI1,PARK7,RERE,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	14502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	8254637	8254907	8254798	Y	NA	RNU1-7P	ERRFI1,PARK7,RERE,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	9750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	8257762	8258040	8257906	Y	NA	RNU1-7P	ERRFI1,RERE,PARK7,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	6617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr1	8262223	8262541	8262360	Y	ERRFI1	RNU1-7P	ERRFI1,PARK7,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	2116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.528553220075173
chr1	8263853	8264184	8264019	Y	NA	RNU1-7P	ERRFI1,PARK7,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	473	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8272041	8272390	8272277	Y	NA	RNU1-7P	ERRFI1,PARK7,SLC45A1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	7384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.325741762470937
chr1	8300045	8300389	8300198	Y	NA	RNU1-7P	PARK7,ERRFI1,RERE	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	35388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.16500804919651
chr1	8319137	8319616	8319397	Y	NA	NA	PARK7,ERRFI1,RERE,SLC45A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU1-7P	54480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	8487656	8487917	8487791	Y	RERE	NA	NA	NA	NA	NA	SLC45A1	111770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	8686491	8686867	8686745	Y	RERE	NA	NA	NA	NA	NA	RERE	188835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	8721734	8722143	8721896	Y	NA	NA	NA	NA	NA	NA	RERE	153559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8724042	8724475	8724233	Y	NA	NA	NA	NA	NA	NA	RERE	151227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8762126	8762475	8762428	Y	NA	NA	NA	NA	NA	NA	RERE	113227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219244721223146
chr1	8810273	8810466	8810370	Y	NA	NA	NA	NA	NA	NA	RERE	65236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8849339	8849636	8849462	Y	NA	RERE	NA	NA	NA	NA	RERE	26066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8858188	8858497	8858477	Y	NA	RERE	NA	NA	NA	NA	RERE	17205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	8933581	8933925	8933847	Y	NA	ENO1-IT1,ENO1	NA	NA	NA	NA	ENO1-IT1	2141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	8953388	8953557	8953428	Y	NA	ENO1-IT1,ENO1	NA	NA	NA	NA	ENO1	16080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	9222919	9223181	9223073	Y	SPSB1	GPR157,RP3-510D11.2	SLC2A7,SLC25A33,MIR34A,GPR157	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP3-510D11.2	17082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169773499683666
chr1	9223692	9223875	9223840	Y	NA	GPR157,RP3-510D11.2	SLC2A7,SLC25A33,MIR34A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP3-510D11.2	16388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	9223907	9224260	9224149	Y	SPSB1	GPR157,RP3-510D11.2	SLC2A7,SLC25A33,MIR34A	IMR90	Hi-C	24141950	RP3-510D11.2	16003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	9241165	9241560	9241362	Y	NA	RP3-510D11.2	SLC2A7,SLC25A33,GPR157,MIR34A,H6PD,SPSB1,TMEM201	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP3-510D11.2	902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr1	9293549	9293739	9293591	Y	H6PD	H6PD	NA	NA	NA	NA	H6PD	715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.740072935661136
chr1	9488839	9489227	9489154	Y	NA	NA	SPSB1,SLC25A33,H6PD,MIR34A,GPR157	IMR90	Hi-C	24141950	RP13-392I16.1	72303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.489275444757828
chr1	9535183	9535425	9535306	Y	NA	RP13-392I16.1	SPSB1,H6PD,SLC25A33,TMEM201	IMR90	Hi-C	24141950	RP13-392I16.1	26105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	9889535	9889880	9889709	Y	KIF1B	CLSTN1	NA	NA	NA	NA	CLSTN1	6951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr1	9960528	9960713	9960585	Y	NA	CTNNBIP1,LZIC,NMNAT1	NA	NA	NA	NA	CTNNBIP1	7681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr1	10269964	10270260	10269995	Y	RBP7,PGD,KIF1B	KIF1B	NA	NA	NA	NA	KIF1B	1101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	10359215	10359483	10359349	Y	NA	NA	NA	NA	NA	NA	KIF1B	90352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	10496880	10497075	10496978	Y	KIF1B	PGD,APITD1,APITD1-CORT,PEX14,DFFA	NA	NA	NA	NA	APITD1,APITD1-CORT	8721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	10559059	10559458	10559098	Y	NA	PEX14,DFFA	NA	NA	NA	NA	DFFA	28476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	10745709	10746041	10745880	Y	NA	NA	NA	NA	NA	NA	CASZ1	108666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr1	10997518	10997835	10997575	Y	CASZ1	NA	NA	NA	NA	NA	TARDBP	72579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	11040299	11040592	11040356	Y	NA	TARDBP	NA	NA	NA	NA	TARDBP	29822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	11122928	11123178	11122962	Y	NA	MASP2,SRM,EXOSC10	NA	NA	NA	NA	SRM	4847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	11415566	11415939	11415808	Y	NA	NA	FBXO2,FBXO44,UBIAD1	IMR90	Hi-C	24141950	UBIAD1	84303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	11559549	11559947	11559917	Y	NA	PTCHD2	NA	NA	NA	NA	PTCHD2	22326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	11798209	11798600	11798405	Y	FBXO6,AGTRAP,TNFRSF8,TNFRSF1B,MFN2,MTHFR,CLCN6	MAD2L2,AGTRAP	NA	NA	NA	NA	AGTRAP	4068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	11942925	11943217	11943160	Y	NPPB,MFN2	NPPB,RNU5E-1,KIAA2013,PLOD1	CLCN6,MTHFR,NPPB,NPPA,MFN2,PLOD1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNU5E-1	22992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	11968510	11969143	11969021	Y	MTHFR,CLCN6,VPS13D,MIIP	RNU5E-1,KIAA2013,PLOD1	NA	NA	NA	NA	RNU5E-1	2301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	11990003	11990329	11990105	Y	PLOD1	RNU5E-1,KIAA2013,PLOD1,MFN2	NA	NA	NA	NA	PLOD1	1933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr1	12050736	12051137	12050880	Y	NPPA,NPPB,MFN2	MFN2,MIIP	NA	NA	NA	NA	MFN2	12498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr1	12126084	12126429	12126131	Y	MIIP,TNFRSF8	MIIP	NA	NA	NA	NA	MIIP	48561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	12217829	12218258	12218109	Y	NA	NA	NA	NA	NA	NA	VPS13D	69866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	12238984	12239461	12239321	Y	AGTRAP,MTHFR,CLCN6,TNFRSF8,TNFRSF1B,VPS13D	VPS13D	VPS13D	IMR90	Hi-C	24141950	VPS13D	48663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	12240401	12240902	12240499	Y	AGTRAP,MTHFR,CLCN6,TNFRSF8,TNFRSF1B	VPS13D	VPS13D	IMR90	Hi-C	24141950	VPS13D	47222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	12485613	12485784	12485698	Y	PRAMEF1,AADACL4	NA	NA	NA	NA	NA	DHRS3	189953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	12589452	12589763	12589585	Y	NA	NA	NA	NA	NA	NA	DHRS3	85974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.289915168475891
chr1	12600525	12600853	12600637	Y	DHRS3	NA	DHRS3,VPS13D	K562	ChIA-PET	22265404	DHRS3	74884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	12614115	12614248	12614183	Y	NA	NA	NA	NA	NA	NA	DHRS3	61489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr1	12674513	12674729	12674684	Y	NA	DHRS3	NA	NA	NA	NA	DHRS3	1008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.553534643931049
chr1	12675687	12675874	12675779	Y	VPS13D	NA	NA	NA	NA	NA	DHRS3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	15240254	15240560	15240408	Y	NA	NA	NA	NA	NA	NA	TMEM51	236468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	15266491	15266726	15266609	Y	NA	NA	NA	NA	NA	NA	TMEM51	210302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.225324440875159
chr1	15335392	15335732	15335561	Y	NA	NA	NA	NA	NA	NA	TMEM51	141296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	15416988	15417263	15417153	Y	NA	NA	NA	NA	NA	NA	TMEM51	59765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	15499033	15499473	15499185	Y	NA	TMEM51	NA	NA	NA	NA	TMEM51	22005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	15519488	15519688	15519655	Y	NA	TMEM51	NA	NA	NA	NA	TMEM51	42460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.32821020305589
chr1	15587806	15588435	15587851	Y	NA	NA	NA	NA	NA	NA	TMEM51	110778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	15697702	15697752	15697727	Y	NA	EFHD2	NA	NA	NA	NA	EFHD2	36639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	15742467	15743324	15742634	Y	TMEM51,TMEM51,SPEN,PLEKHM2,EFHD2,CASP9	EFHD2	NA	NA	NA	NA	EFHD2	8076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	16087189	16087372	16087266	Y	EPHA2,FBLIM1	TMEM82,RP11-169K16.4,FBLIM1	NA	NA	NA	NA	FBLIM1	6087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr1	16158409	16158760	16158690	Y	NA	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.8	5685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	16175691	16176294	16176100	Y	NA	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr1	16176617	16176801	16176705	Y	RSC1A1,C1orf64,SPEN	RP11-169K16.8,SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	3975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	16212759	16213091	16212941	Y	EFHD2,PLEKHM2,ZBTB17,SPEN	SPEN,RP11-169K16.9	NA	NA	NA	NA	RP11-169K16.9	40117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221050616560276
chr1	16227810	16227873	16227842	Y	C1orf64,SPEN	NA	NA	NA	NA	NA	RP11-169K16.9	55168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	16291784	16292062	16291897	Y	CASP9,PLEKHM2,C1orf144,ZBTB17	ZBTB17,C1orf64	SPEN	IMR90	Hi-C	24141950	ZBTB17	8565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	16292565	16293101	16292653	Y	CASP9,PLEKHM2,SPEN,C1orf144,ZBTB17	ZBTB17,C1orf64	SPEN	IMR90	Hi-C	24141950	ZBTB17	7526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	16339360	16339596	16339414	Y	NA	ZBTB17,C1orf64	NA	NA	NA	NA	C1orf64	10629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	16339773	16339933	16339866	Y	CASP9,PLEKHM2,SPEN,ZBTB17	ZBTB17,C1orf64	NA	NA	NA	NA	C1orf64	11042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	16470181	16470602	16470563	Y	NA	RP11-276H7.2,EPHA2	NA	NA	NA	NA	RP11-276H7.2	9104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	16478939	16479163	16479034	Y	FBLIM1,EPHA2	RP11-276H7.2,EPHA2	NA	NA	NA	NA	RP11-276H7.2	543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149888543135257
chr1	16479299	16479465	16479382	Y	FBLIM1,EPHA2	RP11-276H7.2,EPHA2	NA	NA	NA	NA	RP11-276H7.2	241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	16508402	16508642	16508565	Y	FBLIM1	RP11-276H7.2,EPHA2	NA	NA	NA	NA	EPHA2	27820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.180127043650563
chr1	16669074	16669169	16669123	Y	NA	FBXO42	NA	NA	NA	NA	FBXO42	7780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	16670445	16670837	16670642	Y	SPEN,C1orf64,FBXO42	FBXO42	NA	NA	NA	NA	FBXO42	6112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	16696032	16696399	16696223	Y	NA	FBXO42	NA	NA	NA	NA	FBXO42	19083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr1	16825333	16826291	16825792	Y	NA	RNU1-1	SPATA21,NECAP2,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	RNU1-1	12489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.972791365353166
chr1	16826315	16826438	16826391	Y	C1orf64,FAM131C,NBPF1	RNU1-1	NECAP2,SPATA21,CROCCP3,NBPF1,CROCC	IMR90	Hi-C	24141950	RNU1-1	12342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	17023723	17023998	17023841	Y	NA	EIF1AXP1	NA	NA	NA	NA	EIF1AXP1	13173	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03689097838883
chr1	17027024	17027386	17027173	Y	NA	EIF1AXP1	NA	NA	NA	NA	EIF1AXP1	16474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	17229862	17230229	17230053	Y	NA	NA	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MFAP2	75101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	17231253	17231704	17231392	Y	PADI4,PADI2	NA	CROCC,NECAP2,CROCCP3,SPATA21,NBPF1,CROCCP2,MST1P2,ESPNP,MIR3675,ATP13A2,SDHB,PADI2,MFAP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MFAP2	73626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.569476792984886
chr1	17240188	17240783	17240515	Y	NA	NA	CROCC	K562	ChIA-PET	22265404	MFAP2	64547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.461002937324415
chr1	17353741	17353845	17353793	Y	NA	MFAP2,ATP13A2,SDHB	ATP13A2	K562	ChIA-PET	22265404	ATP13A2	17318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	17746173	17746585	17746297	Y	NA	RCC2	NA	NA	NA	NA	RCC2	17635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	17767804	17768710	17768126	Y	NA	RCC2	NA	NA	NA	NA	RCC2	3584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	17896198	17896624	17896362	Y	NA	ARHGEF10L	NA	NA	NA	NA	ARHGEF10L	31868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	17962245	17962730	17962485	Y	PADI4	NA	NA	NA	NA	NA	ARHGEF10L	97915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	18376502	18376814	18376686	Y	NA	NA	ACTL8	IMR90	Hi-C	24141950	ACTL8	296694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	19253034	19253391	19253292	Y	UBR4,IFFO2	ALDH4A1,IFFO2	ALDH4A1	IMR90	Hi-C	24141950	ALDH4A1	25759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	19264079	19264209	19264144	Y	IFFO2	ALDH4A1,IFFO2	ALDH4A1	IMR90	Hi-C	24141950	IFFO2	16971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	19276270	19276542	19276361	Y	AKR7A2	ALDH4A1,IFFO2	NA	NA	NA	NA	IFFO2	4638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	19277155	19277462	19277361	Y	UBR4,IFFO2	ALDH4A1,IFFO2	NA	NA	NA	NA	IFFO2	3718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr1	19283819	19283997	19283911	Y	NA	IFFO2	NA	NA	NA	NA	IFFO2	2639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	19324821	19325090	19324988	Y	TAS1R2,IFFO2	IFFO2	ALDH4A1,IFFO2,UBR4	IMR90	Hi-C	24141950	IFFO2	43641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	19333976	19334220	19334098	Y	NA	NA	UBR4,IFFO2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IFFO2	52796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	19336477	19336714	19336579	Y	NA	NA	UBR4,IFFO2,ALDH4A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IFFO2	55297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr1	19337577	19337942	19337698	Y	NA	NA	UBR4,IFFO2,ALDH4A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IFFO2	56397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.808937487576751
chr1	19699727	19700097	19699843	Y	NA	NA	NA	NA	NA	NA	PQLC2	62907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	19778785	19779174	19779108	Y	NBL1,NBL1,NBL1,NBL1,NBL1	CAPZB	NA	NA	NA	NA	CAPZB	30892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	19803336	19803680	19803404	Y	TMCO4,UBR4	CAPZB,RNU4-28P	NA	NA	NA	NA	CAPZB	6386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	19803913	19804113	19803998	Y	PLA2G2E,TMCO4,UBR4	CAPZB,RNU4-28P	NA	NA	NA	NA	CAPZB	5953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	19926811	19926972	19926927	Y	TMCO4	MINOS1,RPS14P3,NBL1	NA	NA	NA	NA	MINOS1	5334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	20091332	20091506	20091448	Y	PLA2G2A,TMCO4	TMCO4	NA	NA	NA	NA	TMCO4	32932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	20204786	20204981	20204970	Y	OTUD3	OTUD3	NA	NA	NA	NA	OTUD3	2025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	20307927	20308140	20308053	Y	NA	PLA2G2A	NA	NA	NA	NA	PLA2G2A	2995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.695698181429124
chr1	20806851	20807214	20807064	Y	NA	CAMK2N1,MUL1	NA	NA	NA	NA	CAMK2N1	3499	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.01428769648439
chr1	20808010	20808395	20808205	Y	NA	CAMK2N1,MUL1	NA	NA	NA	NA	CAMK2N1	2318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr1	20993397	20993558	20993485	Y	NA	PINK1,DDOST	NA	NA	NA	NA	DDOST	7397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.274464645594328
chr1	21149682	21149798	21149749	Y	CAMK2N1,EIF4G3	HP1BP3	NA	NA	NA	NA	HP1BP3	37866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	21348947	21349299	21348998	Y	CDA,ECE1,ECE1	RP11-487E1.2	NA	NA	NA	NA	RP11-487E1.2	48947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr1	21349725	21349786	21349755	Y	EIF4G3	RP11-487E1.2	NA	NA	NA	NA	RP11-487E1.2	48460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	21401731	21402159	21402110	Y	NA	RP11-487E1.2	NA	NA	NA	NA	RP11-487E1.2	3485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	21428050	21428147	21428101	Y	NA	RP11-487E1.2	NA	NA	NA	NA	RP11-487E1.2	29804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.179144302913216
chr1	21475659	21476054	21476002	Y	EIF4G3,EIF4G3	EIF4G3	NA	NA	NA	NA	EIF4G3	25323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	21476251	21476624	21476546	Y	NA	EIF4G3	NA	NA	NA	NA	EIF4G3	24753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	21611199	21611583	21611510	Y	EIF4G3,ECE1,ALPL,EIF4G3,EIF4G3,ECE1,ECE1	NA	NA	NA	NA	NA	ECE1	58414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	21649091	21649481	21649332	Y	EIF4G3,EIF4G3,ECE1,ECE1,ALPL,ECE1	ECE1	NA	NA	NA	NA	ECE1	20516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	21655798	21656254	21656078	Y	NA	ECE1	NA	NA	NA	NA	ECE1	13743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.254580200653119
chr1	21660622	21661187	21660789	Y	EIF4G3,EIF4G3,EIF4G3,ECE1,ECE1,ALPL,ECE1	ECE1	NA	NA	NA	NA	ECE1	8810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	21724067	21724372	21724186	Y	NA	HS6ST1P1,NBPF3	ECE1,NBPF3,RAP1GAP,ALPL,USP48	IMR90	Hi-C	24141950	HS6ST1P1	28424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	21931612	21931850	21931825	Y	NA	NA	NA	NA	NA	NA	RAP1GAP	61951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	21992948	21993402	21993156	Y	NA	RAP1GAP	NA	NA	NA	NA	RAP1GAP	399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	22066009	22066225	22066117	Y	NA	USP48	RAP1GAP	IMR90	Hi-C	24141950	USP48	41874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	22076024	22076450	22076245	Y	NA	USP48	RAP1GAP	IMR90	Hi-C	24141950	USP48	31649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	22221933	22221950	22221942	Y	NA	RP11-26H16.1,HSPG2	NA	NA	NA	NA	RP11-26H16.1	10641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	22260274	22260656	22260512	Y	HSPG2	RP11-26H16.1,HSPG2	NA	NA	NA	NA	HSPG2	1134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	22266159	22266438	22266333	Y	HSPG2	RP11-26H16.1,HSPG2	NA	NA	NA	NA	HSPG2	4369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	22375194	22375332	22375261	Y	CDC42	LINC00339,CDC42	CDC42	IMR90	Hi-C	24141950	CDC42	1788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr1	22829217	22829453	22829426	Y	NA	NA	NA	NA	NA	NA	ZBTB40	52873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr1	22836447	22836690	22836500	Y	NA	NA	NA	NA	NA	NA	ZBTB40	60103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	23123668	23124069	23123697	Y	NA	NA	NA	NA	NA	NA	EPHB2	88336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	23387479	23387794	23387637	Y	ZNF436	KDM1A	LUZP1	IMR90	Hi-C	24141950	KDM1A	43538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	23448967	23449247	23449107	Y	NA	NA	NA	NA	NA	NA	LUZP1	53054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	23494015	23494642	23494449	Y	NA	LUZP1	NA	NA	NA	NA	LUZP1	7659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	23542417	23542518	23542468	Y	HTR1D	LUZP1	KDM1A,LUZP1	IMR90	Hi-C	24141950	LUZP1	40116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	23669506	23669991	23669712	Y	NA	HNRNPR,C1orf213,ZNF436	NA	NA	NA	NA	HNRNPR	677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr1	23748973	23749126	23749052	Y	NA	TCEA3	NA	NA	NA	NA	TCEA3	107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169773499683666
chr1	23881180	23881765	23881497	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	2520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.969340184030867
chr1	23882500	23882866	23882600	Y	NA	E2F2,ID3	E2F2	IMR90	Hi-C	24141950	ID3	1419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	23888678	23889201	23888997	Y	ID3	E2F2,ID3	NA	NA	NA	NA	ID3	4393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.848215774501297
chr1	23918101	23918449	23918188	Y	SRSF10,CNR2,E2F2	ID3	E2F2,ID3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ID3	33816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr1	24063897	24064210	24064053	Y	PNRC2,RPL11	RPL11,TCEB3,PITHD1	RPL11	IMR90	Hi-C	24141950	TCEB3	3435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	24349340	24349488	24349411	Y	NA	RP11-4M23.7	LYPLA2,SRSF10,MYOM3,PNRC2,SRRM1,HMGCL,IL22RA1,LOC100506963,TCEB3,GALE,FUCA1,CNR2,IL28RA,C1orf201,NIPAL3,RCAN3,RCAN3AS	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-4M23.7	16331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.596595128998203
chr1	24395125	24395214	24395170	Y	MYOM3	NA	NA	NA	NA	NA	RP11-4M23.7	62116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	24477754	24478041	24477856	Y	NA	IL22RA1	IL22RA1	IMR90	Hi-C	24141950	IL22RA1	10143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	24519628	24519970	24519647	Y	GRHL3	NA	MYOM3,IL22RA1,C1orf201,NIPAL3,RCAN3,RCAN3AS,C1orf130	IMR90	Hi-C	24141950	IL22RA1	52017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	24581337	24581604	24581474	Y	NA	NA	MYOM3,GRHL3,C1orf201,RCAN3,NIPAL3,C1orf130	IMR90	Hi-C	24141950	IL22RA1	113726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	24691833	24692082	24691893	Y	PNRC2,GRHL3	NIPAL3	NA	NA	NA	NA	NIPAL3	48202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	24722613	24722643	24722628	Y	NA	NIPAL3	NA	NA	NA	NA	NIPAL3	17641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	24831610	24831804	24831717	Y	NA	RCAN3	NA	NA	NA	NA	RCAN3	4223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	24854734	24855006	24854870	Y	NA	RCAN3	NA	NA	NA	NA	RCAN3	27347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	24856559	24856784	24856672	Y	NA	RCAN3	C1orf130	IMR90	Hi-C	24141950	RCAN3	29172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	24878735	24879052	24878918	Y	NA	NA	NA	NA	NA	NA	RCAN3	51348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr1	25051079	25051208	25051162	Y	NA	CLIC4	RUNX3,CLIC4,SRRM1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CLIC4	18640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.631107453828392
chr1	25237083	25237520	25237460	Y	NA	NA	NA	NA	NA	NA	RUNX3	52092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.186538291730088
chr1	25237596	25238132	25237861	Y	NA	NA	NA	NA	NA	NA	RUNX3	51480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.312759680174326
chr1	25242853	25242883	25242866	Y	NA	RUNX3	NA	NA	NA	NA	RUNX3	46729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	25559638	25560067	25559796	Y	RUNX3,SYF2,C1orf63	SYF2	NA	NA	NA	NA	SYF2	2645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	25566195	25566411	25566257	Y	TMEM57	SYF2	SYF2	MCF7	ChIA-PET	22265404	SYF2	9202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.279230096081484
chr1	25566618	25566670	25566639	Y	NA	SYF2	SYF2	MCF7	ChIA-PET	22265404	SYF2	9625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr1	25823926	25824130	25824028	Y	NA	LDLRAP1	LDLRAP1	IMR90	Hi-C	24141950	LDLRAP1	43941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	25942744	25943208	25942998	Y	EXTL1,MAN1C1	NA	NA	NA	NA	NA	LDLRAP1	74673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	26201699	26201757	26201716	Y	SEPN1	RP1-125I3.2,MIR3917,STMN1	NA	NA	NA	NA	RP1-125I3.2	17595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr1	26490998	26491259	26491133	Y	NA	ZNF593,CNKSR1,RP11-231P20.2	NA	NA	NA	NA	ZNF593	3103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	26677301	26677628	26677413	Y	CATSPER4,ZNF683	CD52,UBXN11,AIM1L	NA	NA	NA	NA	AIM1L	993	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.12087452475849
chr1	26678060	26678317	26678200	Y	CNKSR1,AIM1L	CD52,UBXN11,AIM1L	NA	NA	NA	NA	AIM1L	304	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.01832029100527
chr1	26827232	26827869	26827508	Y	PDIK1L,CEP85,UBXN11,RPS6KA1,GPATCH3,ARID1A	RP3-476K8.4,HMGN2	HMGN2,DHDDS,ARID1A,RPS6KA1,PIGV	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	HMGN2	30291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.797760789010072
chr1	26907862	26908015	26907938	Y	SH3BGRL3,UBXN11	NA	NA	NA	NA	NA	HMGN2	110921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151202812300115
chr1	26946837	26947249	26947076	Y	CATSPER4,UBXN11,UBXN11,PIGV,GPATCH3,ARID1A	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	73275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr1	26947342	26948198	26947481	Y	SH3BGRL3,UBXN11,UBXN11,ZDHHC18,PIGV,GPATCH3,ARID1A,RPS6KA1	NA	RPS6KA1,ARID1A,ZDHHC18,GPATCH3,NR0B2,PIGV,SFN,GPN2,C1orf172,NUDC	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARID1A	72326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.484670092015434
chr1	27021406	27021810	27021509	Y	NA	ARID1A	NA	NA	NA	NA	ARID1A	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	27024638	27025138	27024825	Y	SLC9A1,CEP85,GPN2,GPATCH3,ARID1A,PIGV	ARID1A	NA	NA	NA	NA	ARID1A	4114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr1	27112764	27112917	27112859	Y	WDTC1,SLC9A1,ZNF683,RPS6KA1,ZDHHC18,ARID1A	PIGV,ZDHHC18	NA	NA	NA	NA	PIGV	801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	27160002	27160387	27160288	Y	WDTC1,SLC9A1,RPS6KA1,ARID1A,PIGV,ZDHHC18	PIGV,ZDHHC18,SFN	NA	NA	NA	NA	ZDHHC18	8801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	27165490	27165816	27165600	Y	NA	ZDHHC18,SFN,GPN2	NA	NA	NA	NA	ZDHHC18	14289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	27191386	27191927	27191661	Y	FAM46B,C1orf172,HMGN2,RPS6KA1,SFN,NUDC,GPN2	ZDHHC18,SFN,GPN2,NUDC,GPATCH3,NR0B2	NA	NA	NA	NA	SFN	3753	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.29492184875704
chr1	27321452	27321840	27321632	Y	TMEM222,TRNP1,FAM46B	C1orf172,RP11-344H11.4,TRNP1,FAM46B	NA	NA	NA	NA	TRNP1	3254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr1	27353661	27353962	27353706	Y	TMEM222,MAP3K6,TRNP1	RP11-344H11.4,TRNP1,FAM46B	FAM46B,C1orf172,SLC9A1,WDTC1,WASF2	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM46B	16334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	27527451	27527688	27527509	Y	NA	SLC9A1,WDTC1	WDTC1,SLC9A1,C1orf172	IMR90	Hi-C	24141950	WDTC1	31319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.227952979204874
chr1	27561705	27561803	27561716	Y	NA	WDTC1	NA	NA	NA	NA	WDTC1	2698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	27691785	27692261	27692091	Y	TMEM222,MAP3K6	TMEM222,RP11-4K3__A.5,SYTL1,MAP3K6,GPR3	NA	NA	NA	NA	MAP3K6	402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr1	27775351	27775365	27775358	Y	GPR3	WASF2	NA	NA	NA	NA	WASF2	39304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	27831022	27831314	27831199	Y	NA	WASF2	SYTL1,GPR3,WASF2,AHDC1,FGR	IMR90	Hi-C	24141950	WASF2	16353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.504886065384154
chr1	27848725	27849287	27848935	Y	WDTC1,SYTL1,FAM76A	WASF2	NA	NA	NA	NA	WASF2	34056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	27854575	27854919	27854692	Y	SYTL1,FGR,FGR,FGR,FAM76A,C1orf38	WASF2	NA	NA	NA	NA	WASF2	39906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	27869425	27869556	27869494	Y	NA	NA	NA	NA	NA	NA	WASF2	54756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	27871123	27871471	27871363	Y	NA	NA	NA	NA	NA	NA	WASF2	56454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	27883449	27884140	27883881	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	44802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	27890194	27890387	27890291	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	38555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310622768016884
chr1	27891553	27891803	27891694	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	37139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	27893464	27893671	27893490	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	35271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	27893697	27893957	27893851	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	34985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	27897947	27898332	27898153	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	30610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	27907931	27908052	27907995	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	20890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	27916292	27916674	27916513	Y	XKR8,AHDC1	AHDC1	NA	NA	NA	NA	AHDC1	12268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	27922522	27922947	27922946	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	5995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	27924204	27924421	27924302	Y	XKR8,AHDC1	AHDC1	NA	NA	NA	NA	AHDC1	4521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	27926949	27927449	27927117	Y	NA	AHDC1	NA	NA	NA	NA	AHDC1	1493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	27935491	27936061	27935916	Y	EYA3,SLC9A1,SYTL1,WASF2,XKR8,C1orf38,FGR,FGR,FGR	AHDC1	NA	NA	NA	NA	AHDC1	6549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	27976905	27977430	27977241	Y	EYA3,STX12,C1orf38,FGR,FGR,FGR	AHDC1,IFI6	NA	NA	NA	NA	IFI6	19299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	28098635	28098880	28098690	Y	SESN2,PTAFR,PTAFR,EYA3,FGR,FGR,FGR,STX12	FAM76A,STX12	NA	NA	NA	NA	STX12	941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	28143878	28144081	28143936	Y	NA	STX12,PPP1R8,SCARNA1	NA	NA	NA	NA	PPP1R8	11208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.719856962292417
chr1	28269913	28270209	28270121	Y	SESN2,PTAFR,PTAFR,MED18,EYA3,WASF2,FGR,FGR,FGR,STX12,C1orf38,XKR8	RPA2,SMPDL3B,XKR8	NA	NA	NA	NA	SMPDL3B	10409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	28318645	28318992	28318812	Y	FAM76A	XKR8	NA	NA	NA	NA	XKR8	34672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	28389248	28389585	28389551	Y	NA	EYA3	NA	NA	NA	NA	EYA3	23622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	28431716	28431884	28431798	Y	FGR,FGR,FGR,STX12,C1orf38,SESN2,PTAFR,PTAFR,EYA3	EYA3	PTAFR,EYA3,FAM76A,LOC653566,DNAJC8,ATPIF1,SESN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EYA3	18509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr1	28485616	28486049	28485996	Y	STX12,C1orf38,XKR8,EYA3,SESN2,MED18,PTAFR,PTAFR,DNAJC8	AL353354.1	NA	NA	NA	NA	AL353354.1	39103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	28573636	28574084	28573917	Y	NA	AL353354.1,DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	9954	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.38745355536368
chr1	28576012	28576248	28576109	Y	STX12,C1orf38,EYA3,PTAFR,PTAFR,GMEB1,SESN2,MED18	DNAJC8,ATPIF1,SESN2	NA	NA	NA	NA	SESN2	7790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	28776524	28777127	28776532	Y	NA	NA	NA	NA	NA	NA	RCC1	53328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	28813874	28814267	28814011	Y	EYA3	RCC1,SNHG3,SNORA73B	NA	NA	NA	NA	RCC1	16188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	29137630	29137906	29137764	Y	NA	OPRD1	NA	NA	NA	NA	OPRD1	976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	29214759	29214998	29214903	Y	GMEB1,EPB41	EPB41	NA	NA	NA	NA	EPB41	3156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	29451057	29451462	29451431	Y	TMEM200B,TMEM200B	TMEM200B	NA	NA	NA	NA	TMEM200B	2610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	29503706	29504118	29503928	Y	NA	SRSF4	NA	NA	NA	NA	SRSF4	2381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	29504261	29504387	29504317	Y	YTHDF2,YTHDF2,YTHDF2,EPB41,SRSF4	SRSF4	NA	NA	NA	NA	SRSF4	2112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	29513219	29513546	29513454	Y	NA	SRSF4,MECR,PTPRU	NA	NA	NA	NA	SRSF4	6720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	29517304	29517322	29517313	Y	NA	SRSF4,MECR,PTPRU	NA	NA	NA	NA	SRSF4	10805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	29563709	29564430	29563877	Y	PTPRU	MECR,PTPRU	NA	NA	NA	NA	PTPRU	2681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	29564766	29564995	29564881	Y	NA	MECR,PTPRU	NA	NA	NA	NA	PTPRU	3738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr1	29565515	29565732	29565598	Y	SRSF4,PTPRU	MECR,PTPRU	NA	NA	NA	NA	PTPRU	4487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	29565762	29566055	29565979	Y	SRSF4,PTPRU	MECR,PTPRU	NA	NA	NA	NA	PTPRU	4734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	31218107	31218539	31218451	Y	LAPTM5	LAPTM5	NA	NA	NA	NA	LAPTM5	10128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	31220962	31221590	31221236	Y	NA	LAPTM5	NA	NA	NA	NA	LAPTM5	7077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	31320336	31320627	31320524	Y	NA	NA	SDC3	K562	ChIA-PET	22265404	SDC3	58981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.319170928253851
chr1	31360609	31360977	31360897	Y	NA	SDC3	NA	NA	NA	NA	SDC3	18631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	31430605	31430735	31430670	Y	NA	NA	NA	NA	NA	NA	SDC3	50997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	31537719	31538012	31537814	Y	LAPTM5,PUM1	PUM1	NA	NA	NA	NA	PUM1	881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	31625313	31625543	31625426	Y	NA	NA	SNRNP40,PUM1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	84858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	31627566	31627958	31627874	Y	SDC3,HCRTR1,NKAIN1	NA	SNRNP40,PUM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	82443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.718542693127559
chr1	31628220	31628457	31628359	Y	NA	NA	PUM1,NKAIN1,SERINC2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NKAIN1	81944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr1	31643824	31643962	31643871	Y	NA	NA	NA	NA	NA	NA	NKAIN1	66439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	31737918	31737951	31737935	Y	NA	NKAIN1,SNRNP40,ZCCHC17	NA	NA	NA	NA	NKAIN1	27517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	31976608	31977048	31976952	Y	PUM1	NA	LOC284551	IMR90	Hi-C	24141950	RP11-73M7.1	62126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	32002783	32002833	32002806	Y	NA	RP11-73M7.1,TINAGL1	NA	NA	NA	NA	RP11-73M7.1	36341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	32015159	32015590	32015321	Y	NA	RP11-73M7.1,TINAGL1	FABP3,SERINC2,LOC284551,PEF1,HCRTR1,NKAIN1,TINAGL1	IMR90	Hi-C	24141950	RP11-73M7.1	23584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	32166698	32166999	32166824	Y	COL16A1	COL16A1	NA	NA	NA	NA	COL16A1	921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.459197041987284
chr1	32170830	32171205	32171045	Y	NA	COL16A1	NA	NA	NA	NA	COL16A1	2910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	32180603	32180986	32180867	Y	PEF1,SPOCD1,COL16A1	COL16A1,BAI2	PEF1,COL16A1	IMR90	Hi-C	24141950	COL16A1	12683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.409234194275532
chr1	32253647	32254040	32253861	Y	LCK	BAI2,SPOCD1	NA	NA	NA	NA	BAI2	25153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	32347360	32347436	32347398	Y	NA	NA	NA	NA	NA	NA	PTP4A2	61021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr1	32405536	32405898	32405618	Y	NA	PTP4A2	NA	NA	NA	NA	PTP4A2	2559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	32420307	32420572	32420414	Y	TMEM234,PEF1,PTP4A2,PTP4A2	PTP4A2	KHDRBS1,SPOCD1,PTP4A2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTP4A2	11850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	32715599	32716062	32715681	Y	PTP4A2,BSDC1,LCK,LCK	IQCC,EIF3I,TMEM234,MTMR9LP,FAM167B,LCK,HDAC1	NA	NA	NA	NA	LCK	759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr1	32805161	32805466	32805332	Y	PTP4A2,KHDRBS1,MARCKSL1	HDAC1,MARCKSL1,TSSK3	NA	NA	NA	NA	MARCKSL1	5181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	32966228	32966602	32966575	Y	FAM167B,MARCKSL1,KIAA1522,ZBTB8B,ZBTB8A	ZBTB8B,ZBTB8A	NA	NA	NA	NA	ZBTB8A	36426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr1	33077721	33078012	33077949	Y	FNDC5	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	36492	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.91961805450591
chr1	33082385	33082406	33082394	Y	ZBTB8B,ZBTB8A	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	32098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	33089029	33089046	33089038	Y	NA	ZBTB8OS,RBBP4	NA	NA	NA	NA	ZBTB8OS	25458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	33131314	33131452	33131383	Y	NA	ZBTB8OS,RBBP4	NA	NA	NA	NA	RBBP4	16571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	33182280	33182513	33182368	Y	KIAA1522	NA	SYNC,S100PBP,BSDC1,ZBTB8B,RBBP4,KIAA1522,YARS	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RBBP4	67537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr1	33203093	33203146	33203106	Y	NA	NA	KIAA1522	K562	ChIA-PET	22265404	S100PBP	77222	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.10377820428456
chr1	33225777	33226084	33225890	Y	TMEM54,KIAA1522	NA	NA	NA	NA	NA	S100PBP	54284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	33284832	33285123	33284978	Y	NA	S100PBP,YARS	NA	NA	NA	NA	YARS	3078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	33378487	33378646	33378567	Y	RNF19B	FNDC5,HPCA,TMEM54,RNF19B	NA	NA	NA	NA	TMEM54	13448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	33433896	33434020	33433958	Y	RNF19B	RNF19B	NA	NA	NA	NA	RNF19B	5610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	33446816	33447482	33446950	Y	RNF19B	RNF19B	RNF19B,AK2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNF19B	18530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	33500817	33500865	33500842	Y	NA	AK2,ADC	NA	NA	NA	NA	AK2	43732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	33515825	33516245	33515960	Y	RNF19B	AK2,ADC	AK2,S100PBP,RNF19B,TMEM54,FNDC5,HPCA,ADC	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AK2	28352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	33593963	33594340	33594180	Y	TRIM62	AK2,ADC	NA	NA	NA	NA	ADC	49258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	33596124	33596280	33596183	Y	NA	TRIM62	NA	NA	NA	NA	TRIM62	49380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	33622437	33622835	33622675	Y	PHC2,TRIM62	TRIM62	NA	NA	NA	NA	TRIM62	22825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	33804359	33804743	33804679	Y	RNF19B,TRIM62,PHC2	AL513327.1	NA	NA	NA	NA	AL513327.1	41384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	36397577	36397741	36397665	Y	STK40,SH3D21,EIF2C1,EIF2C3	NA	NA	NA	NA	NA	TEKT2	149935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	36489072	36489418	36489191	Y	NA	NA	COL8A2,TEKT2,ADPRHL2	IMR90	Hi-C	24141950	TEKT2	58258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	36555347	36555633	36555606	Y	STK40,SH3D21,EIF2C1,EIF2C3,ADPRHL2	TEKT2,ADPRHL2	NA	NA	NA	NA	ADPRHL2	2871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr1	36616485	36616868	36616577	Y	STK40,SH3D21,CSF3R,EIF2C4,EIF2C1,EIF2C3,MAP7D1	TRAPPC3,MAP7D1	NA	NA	NA	NA	MAP7D1	2312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	36626561	36626969	36626609	Y	STK40,SH3D21,LSM10,CSF3R,EIF2C4,EIF2C1,EIF2C3,ADPRHL2,MAP7D1,THRAP3	TRAPPC3,MAP7D1	NA	NA	NA	NA	MAP7D1	7381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	36721428	36721771	36721600	Y	NA	THRAP3,SH3D21	NA	NA	NA	NA	THRAP3	33411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	36839449	36839891	36839558	Y	EIF2C1,EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,LSM10,CSF3R	STK40,LSM10	NA	NA	NA	NA	STK40	9606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr1	36840093	36840535	36840445	Y	EIF2C1,EIF2C3,MAP7D1,THRAP3,SH3D21,STK40,LSM10,CSF3R	STK40,LSM10	NA	NA	NA	NA	STK40	8962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.549260819616166
chr1	36853020	36853462	36853143	Y	NA	STK40,LSM10	NA	NA	NA	NA	STK40	3523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	36866636	36866899	36866720	Y	LSM10	STK40,LSM10,OSCP1	NA	NA	NA	NA	LSM10	5143	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.43165739052014
chr1	36952484	36952865	36952715	Y	MAP7D1,THRAP3,SH3D21,STK40,LSM10,CSF3R	OSCP1,MRPS15,CSF3R	NA	NA	NA	NA	CSF3R	5605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr1	37195884	37196007	37195923	Y	OSCP1	NA	GRIK3	IMR90	Hi-C	24141950	CSF3R	249005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	37937293	37937526	37937471	Y	YRDC,MTF1,C1orf122,ZC3H12A	LINC01137,ZC3H12A,MEAF6	NA	NA	NA	NA	LINC01137	486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr1	37942874	37943354	37943027	Y	YRDC,SNIP1,MTF1,ZC3H12A	LINC01137,ZC3H12A,MEAF6	NA	NA	NA	NA	ZC3H12A	4721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	38285621	38285821	38285720	Y	ZC3H12A,MTF1	MANEAL,C1orf122,YRDC,MTF1	NA	NA	NA	NA	YRDC	13764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	38317043	38317898	38317556	Y	ZC3H12A,SNIP1,YRDC,MTF1	C1orf122,YRDC,MTF1	NA	NA	NA	NA	MTF1	5394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	38466019	38466413	38466271	Y	NA	SF3A3,FHL3,UTP11L,RP5-884C9.2	NA	NA	NA	NA	FHL3	2865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.16500804919651
chr1	38513959	38514335	38514147	Y	NA	FHL3,UTP11L,RP5-884C9.2	NA	NA	NA	NA	RP5-884C9.2	2973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	38536566	38536896	38536731	Y	NA	RP5-884C9.2	RRAGC,FHL3,UTP11L	IMR90	Hi-C	24141950	RP5-884C9.2	25580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	38922036	38922121	38922079	Y	NA	NA	NA	NA	NA	NA	RP11-334L9.1	250482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	39508832	39509204	39509012	Y	NA	NDUFS5,MACF1	NA	NA	NA	NA	NDUFS5	18842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	39509536	39509726	39509631	Y	NA	NDUFS5,MACF1	NA	NA	NA	NA	NDUFS5	19546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	39516193	39516422	39516273	Y	NA	NDUFS5,MACF1	NA	NA	NA	NA	NDUFS5	26203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	39598673	39599090	39598722	Y	MACF1	NA	NA	NA	NA	NA	MACF1	53685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	39633654	39634014	39633702	Y	BMP8A	NA	NA	NA	NA	NA	MACF1	88666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	39657786	39658129	39657912	Y	NA	NA	NA	NA	NA	NA	MACF1	112798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	39857791	39857995	39857869	Y	NA	KIAA0754	NA	NA	NA	NA	KIAA0754	16156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr1	39874208	39874673	39874342	Y	KIAA0754	KIAA0754	NA	NA	NA	NA	KIAA0754	57	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.589692766353606
chr1	40331340	40331501	40331388	Y	PABPC4,PPIE,ZMPSTE24,RLF,PPT1,CAP1,BMP8B,TRIT1,MYCL1	TRIT1,RP1-118J21.5	NA	NA	NA	NA	TRIT1	15682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	40561233	40561752	40561648	Y	SMAP2,RLF	NA	NA	NA	NA	NA	PPT1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	40779203	40779606	40779400	Y	NA	COL9A2,SMAP2	NA	NA	NA	NA	COL9A2	1882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	40851431	40851768	40851472	Y	CAP1,RLF,SMAP2,SMAP2,SMAP2,SMAP2	SMAP2	NA	NA	NA	NA	SMAP2	42909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	40954031	40954187	40954167	Y	ZNF684,DEM1	RP11-656D10.3,ZNF684	NA	NA	NA	NA	RP11-656D10.3	18146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	41005233	41005440	41005262	Y	RLF	RP11-656D10.3,ZNF684	NA	NA	NA	NA	ZNF684	10000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	41495531	41495820	41495676	Y	NA	NA	NA	NA	NA	NA	CITED4	169513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	41501440	41501773	41501639	Y	NA	NA	NA	NA	NA	NA	CITED4	175422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	41633074	41633562	41633301	Y	SCMH1,SCMH1,SCMH1	NA	NA	NA	NA	NA	SCMH1	72264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	41650800	41651168	41651109	Y	KCNQ4,SCMH1,SCMH1,SCMH1	NA	NA	NA	NA	NA	SCMH1	54658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	41961925	41962146	41962029	Y	NA	NA	NA	NA	NA	NA	FOXO6	136331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	42774668	42774801	42774679	Y	CCDC30,ZMYND12,RIMKLA,FOXJ3,FOXJ3,FOXJ3	FOXJ3	NA	NA	NA	NA	FOXJ3	24747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr1	43389220	43390772	43390027	Y	NA	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	31758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.226638710040017
chr1	43400932	43401203	43401085	Y	ERMAP,SZT2	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	21327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43405621	43405821	43405630	Y	CCDC30,CCDC23,ERMAP,SZT2,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	16709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr1	43406108	43407009	43406836	Y	YBX1,ERMAP,SZT2	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	15521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	43407355	43407700	43407616	Y	YBX1,ERMAP,SZT2	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1	14830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	43426742	43427095	43427089	Y	CLDN19,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	4022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.535947208892044
chr1	43427522	43427762	43427666	Y	NA	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	4802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280384267501579
chr1	43428386	43429108	43428580	Y	CLDN19,CCDC23,ERMAP,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	5666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.464454118646714
chr1	43429290	43429917	43429491	Y	CCDC23,ERMAP,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	6570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43432863	43433109	43432938	Y	CCDC30,SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	10143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43471435	43471828	43471543	Y	SLC2A1	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	48715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	43471870	43472203	43472037	Y	NA	SLC2A1,SLC2A1-AS1	NA	NA	NA	NA	SLC2A1-AS1	49150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	43475221	43475543	43475382	Y	NA	NA	NA	NA	NA	NA	SLC2A1-AS1	52501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	43524188	43524462	43524346	Y	NA	NA	SLC2A1,FLJ32224,LOC100129924,C1orf50,LEPRE1,ERMAP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC2A1-AS1	101468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43666420	43666443	43666435	Y	NA	WDR65	NA	NA	NA	NA	WDR65	30600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43815718	43816062	43815943	Y	NA	MPL,RP1-92O14.3,CDC20,ELOVL1,MED8,SZT2	NA	NA	NA	NA	RP1-92O14.3	6267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	43884019	43884040	43884030	Y	ST3GAL3,MPL,SZT2	MED8,SZT2	NA	NA	NA	NA	SZT2	30466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	43988888	43989038	43988936	Y	PTPRF	PTPRF	PTPRF	IMR90	Hi-C	24141950	PTPRF	30	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	44011575	44011705	44011627	Y	NA	PTPRF	NA	NA	NA	NA	PTPRF	22717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	44162019	44162313	44162287	Y	NA	KDM4A,ST3GAL3	NA	NA	NA	NA	ST3GAL3	7182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	44419838	44419961	44419903	Y	SLC6A9,RNF220,IPO13	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24	NA	NA	NA	NA	IPO13	9227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	44452990	44453115	44453039	Y	NA	RP11-7O11.3,IPO13,DPH2,ATP6V0B,B4GALT2,CCDC24,SLC6A9	NA	NA	NA	NA	CCDC24	1916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	44495684	44496307	44495779	Y	NA	CCDC24,SLC6A9	B4GALT2	MCF7	ChIA-PET	22265404	SLC6A9	545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr1	44689979	44690114	44690071	Y	NA	DMAP1	NA	NA	NA	NA	DMAP1	12852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	44984751	44985020	44984777	Y	C1orf228,RNF220	NA	NA	NA	NA	NA	RNF220	115885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	45195062	45195154	45195109	Y	RNF220	RNU5F-1,RNU5D-1,KIF2C,RPS8,SNORD55,RPS15AP11	NA	NA	NA	NA	RNU5D-1	220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	45670767	45670868	45670821	Y	PTCH2,ZSWIM5	NA	NA	NA	NA	NA	ZSWIM5	99013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	45746932	45746947	45746939	Y	NA	ZSWIM5	ZSWIM5,UROD,HECTD3	IMR90	Hi-C	24141950	ZSWIM5	22934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	46008399	46008548	46008476	Y	PRDX1,AKR1A1	MMACHC,CCDC163P,PRDX1,AKR1A1,NASP	PRDX1,AKR1A1,NASP,CCDC17	IMR90	Hi-C	24141950	AKR1A1	5667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	46102450	46102810	46102714	Y	NA	RP11-767N6.2,TMEM69,GPBP1L1	NA	NA	NA	NA	RP11-767N6.2	12688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	46111666	46112048	46111975	Y	NA	RP11-767N6.2,TMEM69,GPBP1L1	NA	NA	NA	NA	RP11-767N6.2	3450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.27315037642947
chr1	46268583	46268737	46268651	Y	NA	MAST2	NA	NA	NA	NA	MAST2	17924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	46575103	46575175	46575140	Y	PIK3R3,PIK3R3	NA	NA	NA	NA	NA	TSPAN1	63570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	47718105	47718425	47718265	Y	NA	TAL1	TAL1	IMR90	Hi-C	24141950	TAL1	22213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	47800262	47800514	47800436	Y	NA	STIL,CMPK1	NA	NA	NA	NA	CMPK1	2793	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.15291840900373
chr1	51083951	51084011	51083988	Y	NA	NA	NA	NA	NA	NA	PHBP12	160001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	51102056	51102361	51102067	Y	NA	NA	NA	NA	NA	NA	PHBP12	141651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	51245588	51245972	51245952	Y	NA	PHBP12	NA	NA	NA	NA	PHBP12	1576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr1	51261727	51261870	51261800	Y	NA	PHBP12	NA	NA	NA	NA	PHBP12	17715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	51312022	51312165	51312091	Y	NA	NA	NA	NA	NA	NA	PHBP12	68010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	51415396	51415400	51415398	Y	NA	FAF1,CDKN2C	NA	NA	NA	NA	FAF1	8535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	51442122	51442408	51442227	Y	NA	FAF1,CDKN2C	NA	NA	NA	NA	CDKN2C	17705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	51475745	51476056	51475832	Y	NA	NA	NA	NA	NA	NA	CDKN2C	51328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	51703075	51703494	51703244	Y	OSBPL9	RNF11	NA	NA	NA	NA	RNF11	3132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	51935246	51935592	51935567	Y	NA	RP11-191G24.1,EPS15	NA	NA	NA	NA	RP11-191G24.1	46389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	52088228	52088763	52088412	Y	NA	OSBPL9	NA	NA	NA	NA	OSBPL9	47377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	52173889	52173954	52173921	Y	NA	NA	NA	NA	NA	NA	OSBPL9	133038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206754265098808
chr1	52193179	52193464	52193255	Y	NA	NA	NA	NA	NA	NA	NRD1	149013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	52341008	52341095	52341052	Y	CC2D1B,OSBPL9	NRD1	NA	NA	NA	NA	NRD1	1382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	52507951	52508154	52508101	Y	NA	KTI12,BTF3L4,TXNDC12	NA	NA	NA	NA	KTI12	10463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	52628189	52628583	52628480	Y	NA	ZFYVE9,RP4-800M22.2	NA	NA	NA	NA	RP4-800M22.2	1491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	52885344	52885737	52885540	Y	ZCCHC11	ORC1,PRPF38A	NA	NA	NA	NA	PRPF38A	17108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr1	53168640	53169047	53168726	Y	NA	ZYG11B	SELRC1	MCF7,K562	ChIA-PET	22265404	ZYG11B	21079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr1	53369161	53369511	53369336	Y	SCP2,ECHDC2	ECHDC2,SCP2	NA	NA	NA	NA	ECHDC2	21373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	53385696	53386052	53386029	Y	NA	ECHDC2,SCP2	NA	NA	NA	NA	ECHDC2	4832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr1	53559901	53560045	53560040	Y	NA	NA	NA	NA	NA	NA	CPT2	100056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	53702100	53702340	53702220	Y	NA	CPT2,C1orf123	NA	NA	NA	NA	MAGOH	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	54150852	54151742	54151620	Y	NA	NA	NA	NA	NA	NA	YIPF1	202665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	54260217	54260562	54260390	Y	NA	NA	NA	NA	NA	NA	YIPF1	93845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	54261078	54261111	54261098	Y	NA	NA	NA	NA	NA	NA	YIPF1	93296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	54286238	54286401	54286368	Y	NA	NA	NA	NA	NA	NA	YIPF1	68006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	54441729	54442008	54441915	Y	NA	HSPB11,LRRC42,LDLRAD1	NA	NA	NA	NA	LRRC42	31979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.312759680174326
chr1	54695028	54695502	54695289	Y	NA	MRPL37,CYB5RL	NA	NA	NA	NA	CYB5RL	31319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	54700132	54700688	54700499	Y	NA	CYB5RL	NA	NA	NA	NA	CYB5RL	36423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	54713635	54713793	54713710	Y	YIPF1	CYB5RL	NA	NA	NA	NA	CYB5RL	49926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	54749325	54749366	54749346	Y	NA	NA	CYB5RL,MRPL37	IMR90	Hi-C	24141950	CYB5RL	85616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	54804829	54805209	54805022	Y	NA	NA	NA	NA	NA	NA	SSBP3	71943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	54842500	54842749	54842625	Y	NA	SSBP3	NA	NA	NA	NA	SSBP3	34403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	54873075	54873515	54873406	Y	SSBP3,SSBP3	SSBP3	NA	NA	NA	NA	SSBP3	3637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr1	54953784	54954325	54954090	Y	SSBP3,SSBP3	NA	TCEANC2,SSBP3,CYB5RL,MRPL37,CDCP2,YIPF1,DIO1,TMEM59,HSPB11,HEATR8-TTC4	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACOT11	51605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr1	55327144	55327486	55327453	Y	NA	RP11-67L3.5,DHCR24	NA	NA	NA	NA	RP11-67L3.5	23062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	55431735	55431939	55431831	Y	NA	NA	TMEM61,HEATR8-TTC4,BSND,PCSK9	IMR90	Hi-C	24141950	PCSK9	71282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	55506956	55507037	55506997	Y	NA	PCSK9	NA	NA	NA	NA	PCSK9	3735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	55650535	55650650	55650593	Y	NA	USP24	NA	NA	NA	NA	USP24	28136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	55678785	55679185	55678893	Y	NA	NA	NA	NA	NA	NA	USP24	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	55894779	55895033	55894906	Y	NA	NA	PPAP2B	IMR90	Hi-C	24141950	USP24	215993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	56797894	56798374	56798151	Y	NA	NA	PPAP2B	IMR90	Hi-C	24141950	RP4-710M16.2	80261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr1	56972242	56972492	56972299	Y	NA	NA	NA	NA	NA	NA	RP4-710M16.2	93607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	56974162	56974535	56974381	Y	NA	NA	NA	NA	NA	NA	RP4-710M16.2	95527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr1	56992489	56992799	56992673	Y	NA	NA	NA	NA	NA	NA	RP4-710M16.2	113854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	57024882	57025247	57025166	Y	NA	NA	NA	NA	NA	NA	PPAP2B	83727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	57042744	57043185	57043024	Y	C8B,C8A,C1orf168,PPAP2B	NA	NA	NA	NA	NA	PPAP2B	65789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr1	57043287	57044160	57043621	Y	PRKAA2,PPAP2B	NA	NA	NA	NA	NA	PPAP2B	64814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr1	57376305	57376674	57376418	Y	C8B,C1orf168,C8A	NA	NA	NA	NA	NA	C8B	53139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.161065241701938
chr1	57472428	57472552	57472504	Y	C1orf168,C8A,C8B	C8B	NA	NA	NA	NA	C8B	42615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	57746875	57747249	57747062	Y	C1orf168,C8A,C8B	NA	NA	NA	NA	NA	C8B	317062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	57885160	57885452	57885308	Y	NA	NA	NA	NA	NA	NA	C8B	455347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	57948146	57948309	57948229	Y	NA	NA	NA	NA	NA	NA	C8B	518333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	58317106	58317467	58317287	Y	NA	NA	NA	NA	NA	NA	RPS26P15	202685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	58900423	58900575	58900499	Y	NA	NA	DAB1,CYP2J2,OMA1,FGGY	IMR90	Hi-C	24141950	DAB1	109831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	58969564	58969575	58969570	Y	NA	DAB1,OMA1	NA	NA	NA	NA	DAB1	40831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	59183945	59184311	59184005	Y	NA	MYSM1	FGGY,HOOK1,MIR4711	IMR90	Hi-C	24141950	MYSM1	20181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	59221049	59221462	59221387	Y	NA	JUN,LINC01135	FGGY,HSD52,LOC100131060,JUN,MIR4711	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	JUN	26323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr1	59228706	59229186	59229035	Y	NA	JUN,LINC01135	NA	NA	NA	NA	JUN	18599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr1	59229881	59230252	59230003	Y	NA	JUN,LINC01135	NA	NA	NA	NA	JUN	17533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	59280773	59281281	59281052	Y	FGGY,JUN	JUN,LINC01135	NA	NA	NA	NA	LINC01135	31950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr1	59281510	59281579	59281545	Y	JUN	JUN,LINC01135	NA	NA	NA	NA	LINC01135	32687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	59281873	59282217	59282125	Y	MYSM1,FGGY,JUN	JUN,LINC01135	NA	NA	NA	NA	LINC01135	33050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr1	59350687	59351233	59350859	Y	FGGY	NA	NA	NA	NA	NA	LINC01135	101864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	59369049	59370138	59369602	Y	FGGY	NA	NA	NA	NA	NA	LINC01135	120226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr1	59524373	59524568	59524471	Y	NA	NA	FGGY,MIR4711,LOC100131060,JUN,HSD52	IMR90	Hi-C	24141950	FGGY	235742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	59756067	59756566	59756452	Y	FGGY	FGGY	LOC100131060,HSD52,FGGY	IMR90	Hi-C	24141950	FGGY	3744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	60009140	60009290	60009214	Y	CYP2J2	NA	NA	NA	NA	NA	FGGY	248830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.172733054833692
chr1	60015651	60015887	60015758	Y	FGGY	NA	NA	NA	NA	NA	FGGY	255341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	60099613	60099733	60099673	Y	FGGY	NA	NA	NA	NA	NA	HOOK1	178725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	60157078	60157331	60157204	Y	NA	NA	NA	NA	NA	NA	HOOK1	121127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	60196566	60196799	60196671	Y	NA	NA	NA	NA	NA	NA	HOOK1	81659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr1	61522505	61523042	61522705	Y	NFIA,NFIA,NFIA	NA	INADL,NFIA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP4-668G5.1	88057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	61543611	61543877	61543752	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	RP4-668G5.1	109163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	61549054	61549253	61549232	Y	NA	NA	NA	NA	NA	NA	RP4-668G5.1	114606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	61579491	61579639	61579512	Y	NA	NA	NA	NA	NA	NA	RP4-668G5.1	145043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr1	61583915	61584228	61583999	Y	NA	NA	NA	NA	NA	NA	RP4-668G5.1	149467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr1	61649786	61650305	61649984	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	RP4-668G5.1	215338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.401017562466077
chr1	61707460	61707670	61707565	Y	NA	NA	NA	NA	NA	NA	RP4-668G5.1	273012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	61784447	61784809	61784578	Y	NA	NA	NA	NA	NA	NA	RP4-668G5.1	349999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	61918819	61919182	61919004	Y	NFIA,NFIA,NFIA	NA	NA	NA	NA	NA	TM2D1	269913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr1	62119868	62120084	62119981	Y	NA	NA	TM2D1,INADL	IMR90	Hi-C	24141950	TM2D1	69011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	62726098	62726337	62726314	Y	NA	NA	NA	NA	NA	NA	KANK4	56748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr1	62751605	62751997	62751995	Y	NA	KANK4	NA	NA	NA	NA	KANK4	31088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.323444752568733
chr1	62773248	62773553	62773401	Y	NA	KANK4	NA	NA	NA	NA	KANK4	9532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	63022251	63022602	63022448	Y	NA	ANGPTL3	NA	NA	NA	NA	ANGPTL3	38556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	63151036	63151115	63151076	Y	NA	DOCK7,RP11-230B22.1	NA	NA	NA	NA	DOCK7	854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	64254998	64255371	64255034	Y	ROR1	ROR1	NA	NA	NA	NA	ROR1	17305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	65238542	65238722	65238632	Y	NA	RAVER2	NA	NA	NA	NA	RAVER2	29764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	65381647	65381826	65381744	Y	JAK1	JAK1	NA	NA	NA	NA	JAK1	48361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.448843498020388
chr1	65383044	65383557	65383225	Y	JAK1	JAK1	NA	NA	NA	NA	JAK1	46630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	65398951	65399446	65399123	Y	LEPROT,LEPROT,LEPR,JAK1	JAK1	NA	NA	NA	NA	JAK1	30741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	65421731	65422136	65422135	Y	NA	JAK1	NA	NA	NA	NA	JAK1	8051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	65534990	65535126	65535068	Y	LEPROT,LEPROT,LEPR,JAK1	RP4-535B20.1	AK4,LEPR,JAK1	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	RP4-535B20.1	3570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	65731337	65731853	65731407	Y	DNAJC6	DNAJC6	NA	NA	NA	NA	DNAJC6	19435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	65888047	65888596	65888066	Y	LEPR,LEPROT,LEPR,LEPROT	LEPR,LEPROT	NA	NA	NA	NA	LEPROT	3777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	65891768	65892129	65891951	Y	NA	LEPR,LEPROT	NA	NA	NA	NA	LEPROT	7498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	66537394	66537579	66537468	Y	SGIP1,PDE4B	NA	NA	NA	NA	NA	SGIP1	459487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	66878388	66878620	66878571	Y	PDE4B	NA	PDE4B	IMR90	Hi-C	24141950	SGIP1	118446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	67029191	67029437	67029359	Y	NA	SGIP1	NA	NA	NA	NA	SGIP1	32125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	67374841	67375185	67375111	Y	SGIP1,WDR78	WDR78,MIER1	NA	NA	NA	NA	WDR78	13385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	67460593	67460710	67460683	Y	NA	NA	NA	NA	NA	NA	SLC35D1	57072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr1	67883059	67883215	67883204	Y	NA	SERBP1	NA	NA	NA	NA	SERBP1	10883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	68000341	68000585	68000456	Y	SLC35D1	NA	GNG12,DIRAS3,LOC100289178,GADD45A,WLS	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SERBP1	106243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.500120614896998
chr1	68166463	68166766	68166597	Y	NA	GADD45A	NA	NA	NA	NA	GADD45A	17719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.491572454660032
chr1	68215256	68215932	68215330	Y	NA	NA	NA	NA	NA	NA	GADD45A	66512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	68572958	68573227	68573176	Y	NA	NA	NA	NA	NA	NA	RPS7P4	133511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	68945486	68945782	68945636	Y	NA	DEPDC1	NA	NA	NA	NA	DEPDC1	15122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	68961350	68961555	68961472	Y	NA	DEPDC1	NA	NA	NA	NA	DEPDC1	446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	70691921	70692281	70691982	Y	ANKRD13C,LRRC40,SRSF11	LRRC40,SRSF11,RP4-677H15.4	NA	NA	NA	NA	RP4-677H15.4	7215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	70745994	70746088	70746040	Y	NA	NA	NA	NA	NA	NA	RP4-677H15.4	61288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	70746826	70747040	70746993	Y	ANKRD13C	NA	NA	NA	NA	NA	RP4-677H15.4	62120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	73859450	73859778	73859467	Y	NA	NA	NA	NA	NA	NA	KRT8P21	290975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	75168986	75169131	75169081	Y	NA	TYW3,CRYZ	NA	NA	NA	NA	TYW3	27705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	75182913	75182976	75182918	Y	NA	TYW3,CRYZ	NA	NA	NA	NA	TYW3	13860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr1	75694572	75694736	75694622	Y	NA	NA	NA	NA	NA	NA	SLC44A5	380065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr1	76197113	76197244	76197179	Y	NA	ACADM	NA	NA	NA	NA	ACADM	9077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	76645391	76645540	76645467	Y	NA	NA	NA	NA	NA	NA	SNORD45A	393817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr1	77165935	77166101	77166017	Y	NA	TPI1P1	ST6GALNAC3	IMR90	Hi-C	24141950	TPI1P1	2461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189497846880113
chr1	77595980	77596376	77595997	Y	NA	RP4-706A16.3	NA	NA	NA	NA	RP4-706A16.3	3212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr1	77977128	77977445	77977326	Y	NA	NA	NA	NA	NA	NA	ZZZ3	169659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	78026939	78027232	78027062	Y	FAM73A	NA	NA	NA	NA	NA	ZZZ3	119872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	78132928	78133068	78133059	Y	NA	ZZZ3	NA	NA	NA	NA	ZZZ3	14036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	78196845	78197195	78197020	Y	NA	ZZZ3,USP33,RP4-706L14.2,FAM73A	NA	NA	NA	NA	USP33	26342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	78404062	78404594	78404354	Y	NA	FUBP1,DNAJB4,GIPC2	NA	NA	NA	NA	FUBP1	38200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	78557346	78557710	78557476	Y	NA	NA	NA	NA	NA	NA	GIPC2	114120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.484670092015434
chr1	78703686	78703842	78703764	Y	NEXN	NA	NA	NA	NA	NA	GIPC2	260460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	79215772	79216132	79215819	Y	NA	NA	NA	NA	NA	NA	IFI44	102291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.40709728211809
chr1	79518661	79518859	79518772	Y	NA	NA	NA	NA	NA	NA	IFI44	405180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	81968642	81968976	81968811	Y	NA	NA	NA	NA	NA	NA	ST13P20	216402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	82268420	82269588	82268555	Y	LPHN2	NA	NA	NA	NA	NA	ST13P20	83042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	84284633	84284926	84284781	Y	NA	NA	NA	NA	NA	NA	TTLL7	177907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	84710038	84710507	84710127	Y	NA	NA	NA	NA	NA	NA	PRKACB	168293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.440295337783422
chr1	84971050	84971209	84971115	Y	MCOLN2,GNG5	RPF1,GNG5	NA	NA	NA	NA	GNG5	802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.794310119294973
chr1	85034322	85034489	85034405	Y	CTBS	CTBS	NA	NA	NA	NA	CTBS	3674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	85038681	85038996	85038864	Y	MCOLN2,GNG5,CTBS	CTBS	NA	NA	NA	NA	CTBS	518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr1	85049005	85049203	85049109	Y	NA	CTBS	RPF1,GNG5	IMR90	Hi-C	24141950	CTBS	10842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	85143846	85143980	85143979	Y	SAMD13,SAMD13,DNASE2B,DNASE2B,LPAR3,SSX2IP,SSX2IP	RP11-484D4.3,SSX2IP	NA	NA	NA	NA	SSX2IP	10506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	85643319	85643587	85643547	Y	NA	SYDE2	MIR4423	IMR90	Hi-C	24141950	SYDE2	21142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	85667688	85667915	85667906	Y	NA	SYDE2	NA	NA	NA	NA	SYDE2	2959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	85763626	85763846	85763779	Y	NA	C1orf52,BCL10	NA	NA	NA	NA	BCL10	22853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	85791287	85791404	85791348	Y	NA	NA	NA	NA	NA	NA	BCL10	50514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	85794698	85795078	85794848	Y	CYR61	NA	NA	NA	NA	NA	BCL10	53925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr1	86072885	86073441	86073156	Y	CYR61	DDAH1,CYR61	DDAH1,ZNHIT6,CYR61,COL24A1	IMR90	Hi-C	24141950	CYR61	28441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	86078461	86078819	86078680	Y	DDAH1,CYR61	DDAH1,CYR61	DDAH1,ZNHIT6,CYR61,COL24A1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CYR61	34017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	87171187	87171726	87171422	Y	SH3GLB1	SH3GLB1	NA	NA	NA	NA	SH3GLB1	2928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	87239429	87239698	87239491	Y	NA	NA	HS2ST1,SEP15,SH3GLB1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SH3GLB1	71170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	87240012	87240427	87240202	Y	SH3GLB1	NA	HS2ST1,SEP15,SH3GLB1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SH3GLB1	71753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.780173865578264
chr1	87241358	87241518	87241438	Y	NA	NA	NA	NA	NA	NA	SH3GLB1	73099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	87253936	87254322	87254171	Y	SH3GLB1	NA	SEP15	IMR90	Hi-C	24141950	SH3GLB1	85677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr1	87258759	87259068	87258988	Y	SH3GLB1	NA	NA	NA	NA	NA	SH3GLB1	90500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr1	87355999	87356364	87356182	Y	NA	SEP15,HS2ST1	NA	NA	NA	NA	SEP15	21743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	87691904	87692436	87692089	Y	NA	NA	LOC339524,LMO4	IMR90	Hi-C	24141950	LMO4	99715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	87799623	87799998	87799801	Y	NA	LMO4	NA	NA	NA	NA	LMO4	7472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	87800631	87801610	87800748	Y	NA	LMO4	NA	NA	NA	NA	LMO4	8480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	88289775	88289792	88289784	Y	NA	NA	LMO4	IMR90	Hi-C	24141950	LMO4	497624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	88292387	88292883	88292561	Y	NA	NA	LMO4	IMR90	Hi-C	24141950	LMO4	500236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	89112806	89113177	89112978	Y	NA	PKN2	NA	NA	NA	NA	PKN2	34728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr1	89149109	89149398	89149189	Y	NA	PKN2	NA	NA	NA	NA	PKN2	1204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	89303069	89303193	89303134	Y	GBP4,GBP2,GTF2B	NA	NA	NA	NA	NA	GTF2B	52434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	89358212	89358439	89358316	Y	PKN2,CCBL2	GTF2B	NA	NA	NA	NA	GTF2B	2585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.899001265205634
chr1	89382528	89382593	89382561	Y	NA	GTF2B	NA	NA	NA	NA	GTF2B	26901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	89887466	89887838	89887537	Y	GBP3,GBP1,GBP2,GBP4,GBP5,LRRC8C,LRRC8B	NA	NA	NA	NA	NA	LRRC8B	100557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	89942348	89942369	89942360	Y	NA	LRRC8B	NA	NA	NA	NA	LRRC8B	46026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	90075464	90075685	90075572	Y	NA	LRRC8C	NA	NA	NA	NA	LRRC8C	20946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	90274070	90274340	90274210	Y	NA	LRRC8D	GEMIN8P4,ZNF326,LRRC8D	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LRRC8D	10233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	90309838	90310280	90310072	Y	LRRC8C,ZNF326	LRRC8D	NA	NA	NA	NA	LRRC8D	25265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr1	90319744	90319959	90319950	Y	NA	LRRC8D	NA	NA	NA	NA	LRRC8D	35171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr1	90321378	90321621	90321467	Y	LRRC8C,ZNF326	LRRC8D	NA	NA	NA	NA	LRRC8D	36805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	90372321	90372729	90372378	Y	LRRC8B,LRRC8C,LRRC8D,ZNF326	NA	NA	NA	NA	NA	GEMIN8P4	85151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	90374317	90375036	90374524	Y	LRRC8B,LRRC8B,LRRC8C,LRRC8D,ZNF326	NA	NA	NA	NA	NA	GEMIN8P4	82844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	90376424	90376756	90376561	Y	LRRC8D,LRRC8D,ZNF326	NA	NA	NA	NA	NA	GEMIN8P4	81124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr1	91322848	91323191	91323185	Y	NA	RP4-665J23.1	NA	NA	NA	NA	RP4-665J23.1	7641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	91472225	91472812	91472773	Y	NA	ZNF644	NA	NA	NA	NA	ZNF644	13017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	91478571	91478975	91478771	Y	ZNF644,ZNF644	ZNF644	NA	NA	NA	NA	ZNF644	6854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	91793812	91793887	91793849	Y	NA	NA	NA	NA	NA	NA	HFM1	74539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	91865772	91865792	91865782	Y	NA	HFM1	NA	NA	NA	NA	HFM1	2634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	92164446	92164626	92164554	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	100718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	92183243	92183457	92183382	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	119515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr1	92184014	92184251	92184134	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	120286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr1	92189033	92189061	92189048	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	125305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr1	92196214	92196626	92196448	Y	TGFBR3	NA	HSP90B3P	IMR90	Hi-C	24141950	RP11-91I11.1	132486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	92201825	92202076	92201951	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	138097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	92202579	92202753	92202666	Y	NA	NA	NA	NA	NA	NA	RP11-91I11.1	138851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr1	92218581	92218971	92218958	Y	NA	NA	NA	NA	NA	NA	TGFBR3	150921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr1	92255921	92256250	92256086	Y	NA	NA	NA	NA	NA	NA	TGFBR3	113642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	92295673	92296022	92295848	Y	NA	NA	NA	NA	NA	NA	TGFBR3	73870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	92725087	92725311	92725273	Y	RPAP2,GLMN	RPAP2,GLMN	NA	NA	NA	NA	RPAP2	37211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	92781340	92781526	92781459	Y	TGFBR3,RPAP2	RPAP2,GLMN	NA	NA	NA	NA	GLMN	18796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	92907492	92907607	92907552	Y	NA	GFI1	NA	NA	NA	NA	GFI1	42826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.729719391694239
chr1	93002551	93002867	93002761	Y	RPAP2,GLMN,GFI1	NA	NA	NA	NA	NA	GFI1	52118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	93003662	93004045	93003868	Y	RPAP2,GLMN,RPL5,GFI1	NA	NA	NA	NA	NA	GFI1	53229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	93270252	93270588	93270467	Y	NA	EVI5,RPL5	EVI5	IMR90	Hi-C	24141950	EVI5	14291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	93427945	93428408	93428079	Y	MTF2,DR1,FAM69A	FAM69A	NA	NA	NA	NA	FAM69A	2888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	93694062	93694249	93694102	Y	MTF2,CCDC18	TMED5	NA	NA	NA	NA	TMED5	49777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	93806739	93807078	93807070	Y	NA	DR1,RP4-717I23.3	NA	NA	NA	NA	DR1	2367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr1	93914812	93914954	93914881	Y	FNBP1L	FNBP1L	NA	NA	NA	NA	FNBP1L	3124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	94038553	94038921	94038737	Y	NA	RP5-1033H22.2	NA	NA	NA	NA	RP5-1033H22.2	16835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	94084336	94084510	94084423	Y	NA	RP5-1033H22.2	NA	NA	NA	NA	RP5-1033H22.2	28580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	94125861	94126246	94126059	Y	NA	NA	NA	NA	NA	NA	RP5-1033H22.2	70105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	94127789	94128026	94127840	Y	GCLM,TMED5,DNTTIP2	NA	NA	NA	NA	NA	RP5-1033H22.2	72033	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	94161111	94161471	94161388	Y	GCLM,DNTTIP2	NA	BCAR3	IMR90	Hi-C	24141950	RP5-1033H22.2	105355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	94224546	94224929	94224684	Y	DNTTIP2	NA	MIR760,BCAR3,LOC100129046,FNBP1L	IMR90	Hi-C	24141950	MIR760	85459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr1	94244939	94245309	94245199	Y	ARHGAP29,FNBP1L,BCAR3	NA	BCAR3,MIR760,FNBP1L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MIR760	65079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	94371317	94371601	94371445	Y	NA	DNTTIP2,GCLM	NA	NA	NA	NA	GCLM	1365	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	94429275	94429464	94429371	Y	GCLM	NA	ABCA4,ARHGAP29	IMR90	Hi-C	24141950	GCLM	56309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	94489765	94490012	94489884	Y	NA	NA	NA	NA	NA	NA	ABCA4	94676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	94527681	94527931	94527843	Y	ARHGAP29	NA	NA	NA	NA	NA	ABCA4	56757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	94676840	94677023	94676933	Y	NA	RP11-148B18.1	NA	NA	NA	NA	RP11-148B18.1	34441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	94701813	94701865	94701839	Y	ARHGAP29	RP11-148B18.1,ARHGAP29	NA	NA	NA	NA	RP11-148B18.1	9599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	94712051	94712193	94712123	Y	ARHGAP29	RP11-148B18.1,ARHGAP29	ABCA4,ARHGAP29,ABCD3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-148B18.1	587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	94712395	94712617	94712502	Y	ARHGAP29	RP11-148B18.1,ARHGAP29	ABCA4,ARHGAP29,ABCD3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-148B18.1	931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	94784984	94785158	94785071	Y	NA	ARHGAP29,RP11-148B18.3	ARHGAP29,ABCA4,ABCD3	IMR90	Hi-C	24141950	RP11-148B18.3	11665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	94788386	94788592	94788436	Y	ARHGAP29,F3	ARHGAP29,RP11-148B18.3	ARHGAP29,ABCA4,BCAR3,GCLM	IMR90	Hi-C	24141950	RP11-148B18.3	8231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	94795618	94795987	94795955	Y	NA	RP11-148B18.3	ARHGAP29,ABCA4,ABCD3	IMR90	Hi-C	24141950	RP11-148B18.3	836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	94891778	94892070	94891849	Y	NA	ABCD3	NA	NA	NA	NA	ABCD3	9845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	94937052	94937396	94937225	Y	NA	NA	NA	NA	NA	NA	ABCD3	55119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	95009926	95010072	95010044	Y	F3	F3	F3,SLC44A3	IMR90	Hi-C	24141950	F3	4570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	95179307	95179605	95179478	Y	F3	NA	F3,ABCD3,ALG14	IMR90	Hi-C	24141950	LINC01057	104232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr1	95221261	95221551	95221307	Y	NA	NA	F3,ABCD3	IMR90	Hi-C	24141950	LINC01057	62286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr1	95258204	95258621	95258355	Y	NA	LINC01057,SLC44A3	F3,ABCD3,LOC729970	IMR90	Hi-C	24141950	LINC01057	25216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	95267524	95267667	95267664	Y	NA	LINC01057,SLC44A3	F3,ABCD3,ABCA4,CNN3,LOC729970,ALG14,SLC44A3	IMR90	Hi-C	24141950	LINC01057	16170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	95276451	95276463	95276457	Y	NA	LINC01057,SLC44A3	F3,ABCD3,CNN3,SLC44A3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC01057	7374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	95451299	95451544	95451422	Y	NA	NA	NA	NA	NA	NA	RP4-639F20.1	60177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	95464838	95464926	95464881	Y	NA	NA	NA	NA	NA	NA	ALG14	71575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	95551114	95551338	95551185	Y	NA	ALG14,TMEM56	ALG14,TMEM56-RWDD3,SLC44A3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ALG14	14613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	95593826	95594157	95593992	Y	NA	TMEM56	NA	NA	NA	NA	TMEM56	12932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	97199537	97199912	97199566	Y	NA	PTBP2	NA	NA	NA	NA	PTBP2	14316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	98011760	98012364	98012119	Y	NA	SEC63P1	NA	NA	NA	NA	SEC63P1	2503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.343329197509943
chr1	98070725	98071007	98070866	Y	NA	NA	NA	NA	NA	NA	SEC63P1	61468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	100113534	100114036	100113879	Y	AGL,PALMD	PALMD	NA	NA	NA	NA	PALMD	4035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr1	100138206	100138591	100138311	Y	AGL,AGL,AGL,AGL,PALMD	PALMD	NA	NA	NA	NA	PALMD	28707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	100494312	100494735	100494498	Y	CDC14A,HIAT1	HIAT1	NA	NA	NA	NA	HIAT1	6918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	100678369	100678762	100678562	Y	NA	DBT	NA	NA	NA	NA	DBT	34628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr1	100858865	100858991	100858930	Y	SLC35A3,HIAT1,CDC14A	NA	NA	NA	NA	NA	CDC14A	50281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr1	100859593	100859940	100859621	Y	HIAT1,CDC14A	NA	NA	NA	NA	NA	CDC14A	51009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr1	100905821	100906168	100905941	Y	SLC35A3,HIAT1,CDC14A	NA	NA	NA	NA	NA	CDC14A	97237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	101392986	101393260	101393033	Y	S1PR1,SLC30A7,SLC30A7	EXTL2,SLC30A7	NA	NA	NA	NA	SLC30A7	33354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	101485385	101485713	101485528	Y	NA	RP11-421L21.3,DPH5	NA	NA	NA	NA	RP11-421L21.3	3721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	101486133	101486158	101486151	Y	NA	RP11-421L21.3,DPH5	NA	NA	NA	NA	RP11-421L21.3	3276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	101577594	101578108	101577808	Y	SLC30A7,SLC30A7,S1PR1	NA	SLC30A7,EXTL2	IMR90	Hi-C	24141950	DPH5	87950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	101757305	101757513	101757430	Y	NA	NA	SLC30A7,DPH5	IMR90	Hi-C	24141950	DPH5	267661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	108122481	108123055	108122789	Y	NA	NA	NA	NA	NA	NA	VAV3	382711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	108143362	108143805	108143489	Y	NA	NA	NA	NA	NA	NA	VAV3	361961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	108175822	108176099	108175961	Y	NA	NA	NA	NA	NA	NA	VAV3	329667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	108741685	108742156	108741931	Y	FAM102B	SLC25A24	NA	NA	NA	NA	SLC25A24	214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	109189516	109189718	109189617	Y	TMEM167B,STXBP3,PRPF38B,HENMT1	PRPF38B	NA	NA	NA	NA	PRPF38B	43227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr1	109467804	109468470	109468110	Y	GPSM2,WDR47,SORT1,SORT1,PSRC1,CELSR2,CLCC1	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	35636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr1	109469350	109469540	109469522	Y	NA	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	34566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	109499781	109500180	109500079	Y	NA	AKNAD1,CLCC1	NA	NA	NA	NA	AKNAD1	3926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	109572587	109572654	109572620	Y	NA	WDR47,TAF13	NA	NA	NA	NA	WDR47	10196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	109693905	109693990	109693948	Y	AKNAD1	NA	NA	NA	NA	NA	SCARNA2	53090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	109841804	109842152	109841978	Y	SORT1	PSRC1,MYBPHL	NA	NA	NA	NA	MYBPHL	5511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391155133064253
chr1	109842394	109842833	109842649	Y	NA	PSRC1,MYBPHL	NA	NA	NA	NA	MYBPHL	4830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr1	109981518	109981703	109981616	Y	NA	SORT1,PSMA5,SYPL2,ATXN7L2	CELSR2,SORT1,PSMA5,SYPL2,CYB561D1,MYBPHL,ATXN7L2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PSMA5	14456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	110141142	110141149	110141146	Y	NA	AMPD2	NA	NA	NA	NA	AMPD2	15577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	110333273	110333688	110333592	Y	GNAI3,AMPD2,AMPD2,CSF1	EPS8L3	CSF1,FAM40A,GSTM4,AHCYL1,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EPS8L3	28624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	110334849	110335164	110334977	Y	NA	EPS8L3	CSF1,FAM40A,GSTM4,AHCYL1,EPS8L3,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EPS8L3	30200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.326073290898448
chr1	110335775	110336041	110335953	Y	GSTM2,CSF1	EPS8L3	CSF1,FAM40A,AHCYL1,CYB561D1,GPR61,GNAI3,AMIGO1,GNAT2,AMPD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EPS8L3	31126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	110366477	110366702	110366587	Y	GSTM2,CSF1	NA	CSF1,AHCYL1	IMR90	Hi-C	24141950	EPS8L3	61828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr1	110420039	110420145	110420092	Y	UBL4B	CSF1	CSF1,AHCYL1,EPS8L3,GNAI3,CYB561D1,ATXN7L2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CSF1	30719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr1	110435112	110435421	110435324	Y	SORT1,SORT1	CSF1	CSF1,EPS8L3,SORT1,PSMA5,GSTM3,AHCYL1,GNAI3,GSTM4	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CSF1	15443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	110438276	110438910	110438607	Y	NA	CSF1	CSF1,EPS8L3,SORT1,PSMA5,GSTM3,GNAI3,GSTM4,AHCYL1	IMR90	Hi-C	24141950	CSF1	11954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr1	110476602	110476703	110476653	Y	NA	CSF1,AHCYL1	NA	NA	NA	NA	CSF1	25738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	110502633	110502891	110502762	Y	NA	AHCYL1	CYB561D1,GNAI3,MIR197,AMPD2,GNAT2,GSTM4,GSTM3,EPS8L3,CSF1,AHCYL1	IMR90	Hi-C	24141950	AHCYL1	22417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	110879130	110879445	110879277	Y	CSF1	RBM15,LAMTOR5-AS1	NA	NA	NA	NA	RBM15	2	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	110895542	110895785	110895664	Y	NA	RBM15,LAMTOR5-AS1,SLC16A4	NA	NA	NA	NA	RBM15	16414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	110927812	110928210	110927883	Y	CD53,FAM40A,RBM15	RBM15,LAMTOR5-AS1,SLC16A4	NA	NA	NA	NA	SLC16A4	3494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	111178912	111179243	111179089	Y	RBM15,CD53	NA	KCNA2	K562	ChIA-PET	22265404	SLC16A4	247208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	112050044	112050594	112050328	Y	C1orf183,C1orf183,CEPT1,DRAM2,RAP1A,C1orf162,ADORA3	RAP1A	NA	NA	NA	NA	RAP1A	32246	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	112078528	112078792	112078645	Y	NA	RAP1A,ADORA3	NA	NA	NA	NA	RAP1A	4048	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.43675436943481
chr1	113072370	113072489	113072380	Y	NA	NA	NA	NA	NA	NA	CAPZA1	87306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	113683682	113683919	113683753	Y	NA	RP11-389O22.4	NA	NA	NA	NA	RP11-389O22.4	25697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	113684444	113684648	113684532	Y	NA	RP11-389O22.4	NA	NA	NA	NA	RP11-389O22.4	24968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	113932415	113932748	113932683	Y	NA	MAGI3	NA	NA	NA	NA	MAGI3	1044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr1	114326143	114326379	114326237	Y	HIPK1,HIPK1,HIPK1,AP4B1,PHTF1,RSBN1,PTPN22	PHTF1,RP5-1073O3.2,RSBN1	NA	NA	NA	NA	PHTF1	26032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	114997819	114998047	114997990	Y	NA	NA	NA	NA	NA	NA	TRIM33	53734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr1	115025085	115025405	115025244	Y	BCAS2,TRIM33	TRIM33	NA	NA	NA	NA	TRIM33	26376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	115046601	115046805	115046703	Y	NA	TRIM33	NA	NA	NA	NA	TRIM33	4976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	115052481	115052766	115052572	Y	BCAS2,TRIM33	TRIM33	NA	NA	NA	NA	TRIM33	700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268876552114587
chr1	116370977	116371565	116371162	Y	SLC22A15	NA	NA	NA	NA	NA	SLC22A15	145554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	116694646	116694883	116694753	Y	NA	MAB21L3,RP5-1185H19.2	NA	NA	NA	NA	RP5-1185H19.2	10022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	116918317	116918655	116918398	Y	NA	ATP1A1,ATP1A1OS	NA	NA	NA	NA	ATP1A1	5027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	116918925	116919548	116919274	Y	SLC22A15,ATP1A1,ATP1A1,CD58,ATP1A1	ATP1A1,ATP1A1OS	NA	NA	NA	NA	ATP1A1	5635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	117017908	117018073	117017956	Y	ATP1A1	NA	SLC22A15,ATP1A1,ATP1A1OS	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NAP1L4P1	56641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.446375057435436
chr1	117032033	117032296	117032175	Y	ATP1A1,ATP1A1,CD58	NAP1L4P1	ATP1A1,SLC22A15,MAB21L3,ATP1A1OS,CD58	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	NAP1L4P1	42418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.228284507632385
chr1	117040346	117040781	117040440	Y	ATP1A1,ATP1A1,CD58,ATP1A1	NAP1L4P1	NA	NA	NA	NA	NAP1L4P1	33933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	117047053	117047428	117047164	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1	NA	NA	NA	NA	NAP1L4P1	27286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	117074509	117074935	117074769	Y	NA	CD58	NA	NA	NA	NA	NAP1L4P1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	117080047	117080432	117080232	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	NAP1L4P1	5333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	117081238	117081452	117081381	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	NAP1L4P1	6524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	117082797	117083071	117083005	Y	CD101,ATP1A1,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	NAP1L4P1	8083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	117089417	117089635	117089469	Y	NA	NAP1L4P1,CD58	NA	NA	NA	NA	NAP1L4P1	14703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	117111804	117112156	117112090	Y	TTF2,CD101,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	CD58	143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	117112460	117112738	117112567	Y	TTF2,CD101,ATP1A1,ATP1A1,CD58	NAP1L4P1,CD58	NA	NA	NA	NA	CD58	799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	117256857	117256976	117256917	Y	NA	IGSF3	CD101,TTF2	IMR90	Hi-C	24141950	IGSF3	48482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	117367696	117367920	117367797	Y	NA	NA	NA	NA	NA	NA	FTH1P22	51451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	117610144	117610413	117610279	Y	NA	RP11-27K13.3,TTF2	VTCN1,TRIM45	IMR90	Hi-C	24141950	TTF2	9219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	119401140	119401399	119401296	Y	NA	NA	NA	NA	NA	NA	RP11-418J17.1	279620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	119503304	119503581	119503430	Y	NA	NA	NA	NA	NA	NA	RP11-418J17.1	177438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.689287444956799
chr1	119506251	119506502	119506377	Y	NA	NA	NA	NA	NA	NA	RP11-418J17.1	174517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr1	119668351	119668628	119668490	Y	WARS2	RP11-418J17.1,WARS2	NA	NA	NA	NA	RP11-418J17.1	12391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	119916185	119916369	119916277	Y	NA	RP11-418J17.3	NA	NA	NA	NA	RP11-418J17.3	48259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	120147764	120147961	120147863	Y	HSD3B1	GAPDHP33,ZNF697	NA	NA	NA	NA	GAPDHP33	9962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr1	120180868	120181132	120181082	Y	NBPF7,ZNF697	GAPDHP33,ZNF697,PHGDH	NA	NA	NA	NA	ZNF697	7264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	120188395	120188927	120188667	Y	NA	PHGDH	NA	NA	NA	NA	ZNF697	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	120255895	120256325	120256050	Y	ADAM30	NA	NA	NA	NA	NA	HMGCS2	53203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	120275491	120275880	120275569	Y	ADAM30	HMGCS2	NA	NA	NA	NA	HMGCS2	33648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	120519934	120520272	120520095	Y	NA	NA	NA	NA	NA	NA	NOTCH2	89968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	144009977	144010738	144010098	Y	NA	NA	NA	NA	NA	NA	NBPF8	134070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr1	144533627	144534178	144533764	Y	PDE4DIP	RNU1-59P	PDE4DIP,SEC22B,NOTCH2NL,HIST2H2AB,HIST2H2AC,HIST2H2BE	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNU1-59P	1589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr1	144927217	144927550	144927432	Y	PDE4DIP,SEC22B,PDE4DIP,NOTCH2NL,NBPF10	RNU2-38P	NA	NA	NA	NA	RNU2-38P	15122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr1	145000077	145000849	145000623	Y	NA	NA	NA	NA	NA	NA	RNU2-38P	57405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	145005016	145005394	145005195	Y	NA	NA	NA	NA	NA	NA	RNU2-38P	62344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	145092450	145092883	145092733	Y	SEC22B,PDE4DIP	SEC22B	NBPF9,LOC653513,PDE4DIP,NOTCH2NL,SEC22B,LOC728875,NBPF10	IMR90	Hi-C	24141950	SEC22B	1337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	145113904	145114998	145114671	Y	PDE4DIP,PDE4DIP,SEC22B,NBPF10,NOTCH2NL	SEC22B	NA	NA	NA	NA	SEC22B	19684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	145396760	145397198	145397044	Y	NA	RP11-458D21.1,RNVU1-6,TXNIP	LIX1L,HFE2,ANKRD35,TXNIP,RBM8A,ANKRD34A,PIAS3,POLR3GL,GNRHR2,PEX11B,RNF115	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNVU1-6	16003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr1	145433530	145433648	145433615	Y	PDE4DIP,PDE4DIP,SEC22B,NOTCH2NL,NBPF10	TXNIP,POLR3GL,ANKRD34A,LIX1L	NA	NA	NA	NA	TXNIP	2821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	145437595	145437817	145437681	Y	CD160,TXNIP,POLR3GL,ANKRD34A	TXNIP,POLR3GL,ANKRD34A,LIX1L	NA	NA	NA	NA	TXNIP	1126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	145455122	145455741	145455465	Y	PDE4DIP,PDE4DIP,SEC22B,NOTCH2NL,NBPF10,CD160,TXNIP	TXNIP,POLR3GL,ANKRD34A,LIX1L,RBM8A	NA	NA	NA	NA	POLR3GL	12647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	145640932	145641287	145641091	Y	NBPF10	POLR3C,RNF115	NA	NA	NA	NA	RNF115	31896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	145701524	145701615	145701570	Y	NA	PDZK1	NA	NA	NA	NA	PDZK1	23303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	146694437	146694614	146694526	Y	NA	PDIA3P1,CHD1L,FMO5	NA	NA	NA	NA	CHD1L	17677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	146774989	146775112	146775013	Y	NA	NA	NA	NA	NA	NA	FMO5	62289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	146956714	146956895	146956804	Y	GPR89B	NA	NA	NA	NA	NA	ACP6	183723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	147010961	147011177	147011069	Y	NA	NA	ACP6	IMR90	Hi-C	24141950	ACP6	129441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	147080043	147080251	147080097	Y	PRKAB2,CHD1L,BCL9	NA	NA	NA	NA	NA	ACP6	60367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.385567039584513
chr1	147189197	147189465	147189317	Y	NA	ACP6	ACP6,LOC100289211	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ACP6	48579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	147344950	147345054	147345002	Y	NA	NA	GJA5	IMR90	Hi-C	24141950	GPR89B	53452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	147806841	147807184	147807140	Y	NA	RNU1-122P	NA	NA	NA	NA	RNU1-122P	1955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr1	148000699	148000802	148000795	Y	NA	RNVU1-13	NA	NA	NA	NA	RNVU1-13	8553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr1	149138053	149138113	149138087	Y	NA	PFN1P12	NA	NA	NA	NA	PFN1P12	25398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	149215297	149215704	149215586	Y	NA	RNVU1-17	NA	NA	NA	NA	RNVU1-17	23028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	149816287	149817606	149817166	Y	NA	HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2BC,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB	NA	NA	NA	NA	HIST2H2BC	2733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	149820361	149820952	149820609	Y	NA	HIST2H2BF,HIST2H3D,HIST2H4A,HIST2H3C,HIST2H2AA3,HIST2H2BC,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB	NA	NA	NA	NA	HIST2H2AA4	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	149853331	149853687	149853509	Y	PLEKHO1	HIST2H3C,HIST2H2AA3,HIST2H2BC,HIST2H2AA4,HIST2H3A,HIST2H4B,HIST2H2BE,BOLA1,HIST2H2AB,SV2A,SF3B4	NA	NA	NA	NA	HIST2H2BE	2545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	149978692	149979077	149978971	Y	SV2A,CA14,OTUD7B	OTUD7B	NA	NA	NA	NA	OTUD7B	1548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	149981648	149981889	149981683	Y	ANP32E,OTUD7B	OTUD7B	NA	NA	NA	NA	OTUD7B	1023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	150135231	150135764	150135536	Y	PRPF3,MCL1,PLEKHO1	PLEKHO1	NA	NA	NA	NA	PLEKHO1	15858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.779842337150754
chr1	150185878	150186128	150186012	Y	HIST2H2AC,VPS45,RPRD2,ANP32E	ANP32E,RNU2-17P,CA14	NA	NA	NA	NA	ANP32E	20376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr1	150539630	150541082	150540777	Y	NA	ADAMTSL4,MCL1	NA	NA	NA	NA	MCL1	8984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	150577042	150577503	150577391	Y	CDC42SE1,PLEKHO1,PRPF3,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	22585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.559945892010573
chr1	150585815	150586394	150586132	Y	CDC42SE1,PLEKHO1,ANP32E,PRPF3,FAM63A,FAM63A,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	13694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr1	150592182	150592667	150592572	Y	CDC42SE1,PLEKHO1,ANP32E,PRPF3,FAM63A,CTSS,MCL1	MCL1,ENSA	NA	NA	NA	NA	ENSA	7421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	150800498	150800843	150800671	Y	NA	ARNT	NA	NA	NA	NA	ARNT	46401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	150949569	150950014	150949933	Y	ZNF687,TNFAIP8L2,SELENBP1,RFX5,POGZ,POGZ,PI4KB,PI4KB,CDC42SE1,MCL1,CTSS,ARNT,SETDB1,LASS2,PRUNE,FAM63A,FAM63A,FAM63A	CERS2,ANXA9,FAM63A,PRUNE	NA	NA	NA	NA	ANXA9	2479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chr1	151168916	151169086	151168995	Y	NA	SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	PIP5K1A	491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.337741104030202
chr1	151172142	151172526	151172243	Y	FAM63A,GABPB2,SNX27,POGZ,LYSMD1,LYSMD1,TMOD4	SCNM1,LYSMD1,VPS72,PIP5K1A	NA	NA	NA	NA	PIP5K1A	3717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	151184646	151184728	151184696	Y	NA	LYSMD1,VPS72,PIP5K1A,PSMD4	NA	NA	NA	NA	PIP5K1A	16221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	151255796	151256115	151256047	Y	NA	PSMD4,ZNF687,RP11-126K1.2,PI4KB	NA	NA	NA	NA	RP11-126K1.2	3391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	151344220	151344519	151344431	Y	NA	PI4KB,RP11-126K1.6,RFX5,SELENBP1,PSMB4	NA	NA	NA	NA	SELENBP1	1011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr1	151418157	151418544	151418397	Y	NA	PSMB4,POGZ	NA	NA	NA	NA	POGZ	11397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	151445792	151446161	151446000	Y	C1orf56,RIIAD1,OAZ3	POGZ,CGN	RIIAD1,LOC100132111,TUFT1,CGN,SNX27,POGZ,PI4KB,PSMB4,CELF3,OAZ3,TDRKH,MRPL9,RORC,C2CD4D	IMR90,MCF7,HELA,H1ESC,K562	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	POGZ	15851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	151485676	151485841	151485746	Y	C2CD4D,CGN,TUFT1	CGN,SNORA44,TUFT1	NA	NA	NA	NA	CGN	4690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	151486181	151486300	151486231	Y	SELENBP1,RORC,CGN	CGN,SNORA44,TUFT1	NA	NA	NA	NA	CGN	5195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	151580936	151581099	151580976	Y	NA	SNX27,RP11-404E16.1	RIIAD1,CELF3	IMR90	Hi-C	24141950	SNX27	1442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	151868154	151868386	151868273	Y	NA	THEM4	NA	NA	NA	NA	THEM4	11898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	151960875	151961433	151961102	Y	S100A11,S100A10	S100A10	NA	NA	NA	NA	S100A10	3433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	152006910	152007460	152006991	Y	SNX27,S100A11	S100A10,S100A11	NA	NA	NA	NA	S100A11	10923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	152007615	152008057	152007721	Y	THEM4	S100A10,S100A11	NA	NA	NA	NA	S100A11	10326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	152140379	152140745	152140485	Y	NA	NA	NA	NA	NA	NA	S100A11	121996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	153505144	153505346	153505245	Y	NA	BX470102.3,S100A6,S100A3,S100A4,S100A2	NA	NA	NA	NA	BX470102.3	1065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	153510895	153511054	153510975	Y	NA	BX470102.3,S100A6,S100A3,S100A4,S100A2	NA	NA	NA	NA	S100A6	4175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	153525322	153525412	153525387	Y	PGLYRP3,S100A9,S100A12,S100A7L2,S100A4	BX470102.3,S100A6,S100A3,S100A4,S100A2	S100A4,S100A5	K562	ChIA-PET	22265404	S100A4	4710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.350723186326814
chr1	153526279	153526545	153526389	Y	S100A9,S100A12,S100A8,S100A4,S100A13,CHTOP	BX470102.3,S100A6,S100A3,S100A4,S100A2	S100A4,S100A5	K562	ChIA-PET	22265404	S100A4	5667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	153541018	153541368	153541269	Y	PGLYRP3,S100A7L2,S100A6,S100A2,S100A16,S100A14,S100A13,S100A13,S100A13	BX470102.3,S100A6,S100A3,S100A4,S100A2,S100A16,S100A14	NA	NA	NA	NA	S100A2	2652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr1	153584539	153584862	153584750	Y	NA	S100A2,S100A16,S100A14,S100A1,CHTOP,S100A13,SNAPIN	NA	NA	NA	NA	S100A16	918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	153704694	153704943	153704839	Y	NA	INTS3,SLC27A3	NA	NA	NA	NA	INTS3	6151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr1	153818420	153818667	153818544	Y	NA	NA	NA	NA	NA	NA	SLC27A3	73590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	153824989	153825297	153825210	Y	NA	NA	NA	NA	NA	NA	GATAD2B	68154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	153936554	153936861	153936642	Y	UBAP2L,HAX1,S100A16,SNAPIN,ILF2,JTB,CREB3L4	GATAD2B,DENND4B,CRTC2,CREB3L4,SLC39A1,JTB,RAB13,RPS27,RP11-422P24.9	NA	NA	NA	NA	CREB3L4	1149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	154151566	154151965	154151766	Y	NA	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	13159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	154154606	154155027	154154830	Y	SLC27A3,DENND4B,CRTC2,IL6R,ADAR,ADAR,UBAP2L,UBAP2L,TPM3	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	10097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194263297367269
chr1	154166147	154166533	154166338	Y	NUP210L,TDRD10,CHRNB2,C1orf189	TPM3,UBAP2L,C1orf43	NA	NA	NA	NA	TPM3	1023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	154299137	154299452	154299353	Y	UBAP2L,ATP8B2,IL6R	AQP10,ATP8B2	NA	NA	NA	NA	ATP8B2	3108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	154391539	154392211	154392184	Y	GATAD2B,CRTC2,UBAP2L,ADAR,ADAR,IL6R	IL6R	NA	NA	NA	NA	IL6R	15870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	154392646	154393050	154392862	Y	CRTC2,UBAP2L,C1orf43,UBAP2L,ADAR,IL6R	IL6R	NA	NA	NA	NA	IL6R	16977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	154577703	154577929	154577737	Y	NA	UBE2Q1,CHRNB2,ADAR	NA	NA	NA	NA	ADAR	20546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	154579303	154579782	154579555	Y	UBAP2L,IL6R,SHC1,ADAR,ADAR	UBE2Q1,CHRNB2,ADAR	NA	NA	NA	NA	ADAR	18693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	154728745	154728994	154728977	Y	NA	NA	NA	NA	NA	NA	ADAR	130270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	154760803	154761111	154760957	Y	NA	NA	NA	NA	NA	NA	PMVK	146356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	154899922	154900189	154899933	Y	NA	PMVK,PBXIP1,PYGO2,SHC1	NA	NA	NA	NA	PMVK	7278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	154910155	154910399	154910216	Y	ADAR,PBXIP1,MTX1	PMVK,PBXIP1,PYGO2,SHC1,FLAD1	NA	NA	NA	NA	PMVK	2688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	154972628	154972915	154972668	Y	CLK2,DPM3,DPM3,PYGO2,FLAD1	PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.338563747022786
chr1	154973036	154973200	154973120	Y	CLK2,ADAR,ADAR,PYGO2,CKS1B,ZBTB7B,DCST1	PBXIP1,PYGO2,SHC1,FLAD1,ADAM15	NA	NA	NA	NA	ZBTB7B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr1	154973335	154973935	154973656	Y	ADAR,ADAR,MTX1,SHC1,ZBTB7B	PBXIP1,PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.295994888127905
chr1	154977099	154977253	154977190	Y	ADAR,ADAR,ZBTB7B,DCST1	PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	3972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	154978035	154978657	154978307	Y	ADAR,ADAR,MTX1,SHC1,ZBTB7B,DCST1	PYGO2,SHC1,FLAD1,ZBTB7B,ADAM15	NA	NA	NA	NA	ZBTB7B	4908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	155052148	155052357	155052334	Y	NA	ADAM15,EFNA4,EFNA3,EFNA1	NA	NA	NA	NA	EFNA3	17924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	155064132	155064186	155064153	Y	NA	ADAM15,EFNA4,EFNA3,EFNA1,SLC50A1,DPM3	NA	NA	NA	NA	EFNA3	29908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	155066604	155066635	155066620	Y	NA	ADAM15,EFNA4,EFNA3,EFNA1,SLC50A1,DPM3	DPM3,KRTCAP2,EFNA1,TRIM46,SLC50A1	IMR90	Hi-C	24141950	EFNA1	31301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	155097183	155097419	155097260	Y	NA	EFNA1,SLC50A1,DPM3,KRTCAP2	NA	NA	NA	NA	EFNA1	517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	155098409	155098801	155098460	Y	PKLR,PKLR,EFNA4,EFNA1	EFNA1,SLC50A1,DPM3,KRTCAP2	NA	NA	NA	NA	EFNA1	473	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.432078705973967
chr1	155164183	155164959	155164537	Y	NA	KRTCAP2,MIR92B,MTX1,THBS3,GBAP1,GBA	NA	NA	NA	NA	MIR92B	1215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.152517081464972
chr1	155283531	155283932	155283776	Y	DCST1,EFNA1	HCN3,CLK2,PKLR,FDPS,RUSC1	NA	NA	NA	NA	RUSC1	4755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	155443130	155443303	155443253	Y	NA	NA	NA	NA	NA	NA	ASH1L-AS1	86518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	155496665	155497012	155496914	Y	DCST1,HCN3,YY1AP1,ASH1L	ASH1L-AS1,ASH1L	NA	NA	NA	NA	ASH1L-AS1	32809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	155535083	155535193	155535176	Y	HCN3	ASH1L-AS1,ASH1L,RP11-29H23.6	NA	NA	NA	NA	ASH1L	4485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	155703696	155704096	155703788	Y	NA	DAP3,YY1AP1	NA	NA	NA	NA	YY1AP1	46905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	155904830	155905033	155904931	Y	NA	RIT1,KIAA0907	NA	NA	NA	NA	KIAA0907	2639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	155916072	155916212	155916141	Y	ASH1L,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,SLC25A44,RIT1,KIAA0907,ARHGEF2,ARHGEF2	RIT1,KIAA0907	NA	NA	NA	NA	KIAA0907	13881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	155951073	155951535	155951364	Y	NA	KIAA0907,ARHGEF2,SSR2	KIAA0907	K562	ChIA-PET	22265404	ARHGEF2	23326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	156073854	156074351	156074085	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,LMNA	RAB25,MEX3A,LMNA,SEMA4A	LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LMNA	23490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	156074715	156075305	156075042	Y	YY1AP1,YY1AP1,YY1AP1,YY1AP1,LMNA	RAB25,MEX3A,LMNA,SEMA4A	LMNA,SLC25A44,PMF1-BGLAP,PAQR6,SMG5,C1orf182,CCT3,MEX3A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LMNA	24351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	156089405	156089622	156089466	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,ARHGEF2,LMNA	MEX3A,LMNA,SEMA4A	NA	NA	NA	NA	SEMA4A	25535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	156095033	156095181	156095051	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,GON4L,RIT1,ARHGEF2,ARHGEF2,LMNA	MEX3A,LMNA,SEMA4A	NA	NA	NA	NA	SEMA4A	19976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	156103413	156103690	156103594	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,GON4L,LMNA	SEMA4A	NA	NA	NA	NA	SEMA4A	11467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	156118146	156118395	156118328	Y	MEF2D,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,YY1AP1,RIT1,ARHGEF2,ARHGEF2	SEMA4A,SLC25A44	NA	NA	NA	NA	SEMA4A	2989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	156251648	156251762	156251690	Y	RIT1,KIAA0907,ARHGEF2,LMNA,SLC25A44	BGLAP,SMG5,TMEM79,C1orf85	NA	NA	NA	NA	TMEM79	922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	156426931	156427503	156427197	Y	ARHGEF2,ARHGEF2,LMNA,SLC25A44,PMF1,C1orf182,SH2D2A,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	41117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.312759680174326
chr1	156473111	156473378	156473326	Y	LMNA,C1orf182,RRNAD1	MEF2D	NA	NA	NA	NA	MEF2D	4491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	156474686	156475018	156474923	Y	SLC25A44,PMF1,RRNAD1,MEF2D	MEF2D	NA	NA	NA	NA	MEF2D	6066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr1	156541089	156541488	156541192	Y	NA	IQGAP3,TTC24,APOA1BP,GPATCH4	MEF2D,C1orf61	IMR90	Hi-C	24141950	IQGAP3	693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	156629760	156630406	156629967	Y	PAQR6,PAQR6,C1orf182,CCT3,ISG20L2,GPATCH4,HAPLN2	RP11-284F21.7,NES,CRABP2	NA	NA	NA	NA	RP11-284F21.7	544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.517376521508492
chr1	156631732	156631960	156631846	Y	NA	RP11-284F21.7,NES,CRABP2	NA	NA	NA	NA	RP11-284F21.7	2516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	156632199	156632473	156632320	Y	NA	RP11-284F21.7,NES,CRABP2	NA	NA	NA	NA	RP11-284F21.7	2983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	156634807	156635020	156634939	Y	NES	RP11-284F21.7,NES,CRABP2	NA	NA	NA	NA	RP11-284F21.7	5591	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.12005137015871
chr1	156718467	156719136	156718868	Y	C1orf182,MEF2D,ETV3,ETV3,RRNAD1	CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC,HDGF	NA	NA	NA	NA	PRCC	65	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr1	156719450	156719815	156719708	Y	ETV3,ETV3,RRNAD1	CRABP2,RRNAD1,ISG20L2,MRPL24,PRCC,HDGF	NA	NA	NA	NA	PRCC	1048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.707697522988389
chr1	157076072	157076782	157076408	Y	RRNAD1,ETV3,ETV3	KRT8P45,ETV3	NA	NA	NA	NA	ETV3	29484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	157124774	157125221	157124855	Y	RRNAD1,ETV3,ETV3	ETV3	ETV3,ETV3L	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	ETV3	18508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	158146699	158147069	158146946	Y	NA	ELL2P1	NA	NA	NA	NA	ELL2P1	1154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.763900188096917
chr1	158147244	158147839	158147743	Y	NA	ELL2P1	NA	NA	NA	NA	ELL2P1	1699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.26756228294973
chr1	158942717	158942925	158942799	Y	OR10J1,OR10R2,OR6P1,OR10X1,OR10Z1,OR6K3,OR6N1,OR6N2,FCER1A,PYHIN1	NA	NA	NA	NA	NA	RP11-419N10.5	784035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	158994687	158995148	158994758	Y	OR6P1,OR10X1,OR10Z1,OR6K3,OR6N1,OR6N2,MNDA,IFI16,FCER1A	NA	NA	NA	NA	NA	RP11-419N10.5	731812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	159158093	159158524	159158429	Y	NA	NA	NA	NA	NA	NA	RP11-419N10.5	568436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	159880076	159880706	159880437	Y	FCRL6,DCAF8,TAGLN2	CCDC19,TAGLN2	NA	NA	NA	NA	CCDC19	12123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	159887185	159887340	159887284	Y	NA	CCDC19,TAGLN2	NA	NA	NA	NA	TAGLN2	6182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	160182240	160182579	160182410	Y	NA	PEA15,RP11-574F21.2	NA	NA	NA	NA	PEA15	9113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	160203977	160204039	160204035	Y	NA	PEA15,RP11-574F21.2,DCAF8	NA	NA	NA	NA	RP11-574F21.2	25495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	160510042	160510238	160510216	Y	DCAF8,SLAMF1,CD48,SLAMF6	NA	NA	NA	NA	NA	COPA	198852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	160639828	160639998	160639908	Y	NA	NA	NA	NA	NA	NA	RP11-312J18.5	222772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr1	160807359	160807588	160807459	Y	SLAMF6,CD48,USF1,CD244,ARHGAP30,LY9	NA	NA	NA	NA	NA	RP11-312J18.5	55182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	160982920	160983992	160983766	Y	CD84,CD48,SLAMF7,CD244,NR1I3,FCGR2A,FCER1G,DEDD,DEDD,USF1,ARHGAP30	F11R,USF1	NA	NA	NA	NA	F11R	5146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.365682594643304
chr1	161170260	161170636	161170567	Y	PCP4L1,ADAMTS4,NDUFS2	UFC1,USP21,PPOX,B4GALT3,NDUFS2,ADAMTS4,FCER1G,APOA2,TOMM40L,NR1I3	NA	NA	NA	NA	ADAMTS4	3414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	161170933	161171185	161171002	Y	ADAMTS4,NDUFS2	USP21,PPOX,B4GALT3,NDUFS2,ADAMTS4,FCER1G,APOA2,TOMM40L,NR1I3	NA	NA	NA	NA	ADAMTS4	4087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	161324130	161324422	161324290	Y	NA	MPZ,SDHC	NA	NA	NA	NA	SDHC	42083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	161356382	161356652	161356546	Y	FCRLB,ATF6,FCER1G,FCGR2A	NA	NA	NA	NA	NA	SDHC	74335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	161359666	161360218	161359899	Y	HSPA6,ATF6,ARHGAP30,FCER1G,FCGR2A	NA	NR1I3,APOA2,TOMM40L,SDHC,NDUFS2,ADAMTS4,UFC1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SDHC	77619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.550575088781023
chr1	161360317	161360802	161360606	Y	NA	NA	NR1I3,APOA2,TOMM40L,NDUFS2,ADAMTS4,SDHC,UFC1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	78270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	161369073	161369991	161369486	Y	NA	NA	ADAMTS4,NDUFS2,APOA2,TOMM40L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SDHC	87026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr1	161500608	161500899	161500816	Y	USF1,ARHGAP30,FCER1G,FCGR2A,ATF6,HSPA6,FCGR3B,FCGR3A,FCGR3A	NA	NA	NA	NA	NA	DUSP12	216649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr1	161582212	161582506	161582417	Y	HSPA6,FCGR3A	NA	NA	NA	NA	NA	DUSP12	135042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	161847357	161847565	161847361	Y	NA	NA	NA	NA	NA	NA	ATF6	113273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr1	162539981	162540420	162539994	Y	C1orf226,UHMK1,HSD17B7,UAP1	UAP1	NA	NA	NA	NA	UAP1	10658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	162666168	162666338	162666209	Y	NA	NA	NA	NA	NA	NA	HSD17B7	92154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	165323712	165323885	165323804	Y	NA	NA	NA	NA	NA	NA	RXRG	88548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	165635693	165636148	165635824	Y	NA	MGST3,ALDH9A1	NA	NA	NA	NA	ALDH9A1	29952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	165797615	165798367	165798308	Y	UCK2	UCK2,TMCO1	NA	NA	NA	NA	TMCO1	2623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.460511311152142
chr1	167191021	167191933	167191618	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	2955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr1	167192959	167193266	167193111	Y	NA	POU2F1	NA	NA	NA	NA	POU2F1	4893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	167683554	167683813	167683605	Y	POU2F1,CREG1	MPZL1	NA	NA	NA	NA	MPZL1	4616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	167730247	167730494	167730371	Y	NA	MPZL1	NA	NA	NA	NA	MPZL1	41818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	168149052	168149361	168149233	Y	NA	GPR161,TIPRL,RPL34P1,SFT2D2	NA	NA	NA	NA	TIPRL	2881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr1	168338134	168338331	168338175	Y	NA	NA	NA	NA	NA	NA	TBX19	89856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr1	168355862	168356010	168355936	Y	NA	NA	NA	NA	NA	NA	RP5-968D22.3	106872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	168368318	168368620	168368438	Y	TBX19	NA	NA	NA	NA	NA	RP5-968D22.3	94262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	168382983	168383105	168383068	Y	NA	NA	NA	NA	NA	NA	RP5-968D22.3	79777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	168409627	168409736	168409651	Y	NA	NA	F5	IMR90	Hi-C	24141950	RP5-968D22.3	53146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr1	168483874	168484202	168483927	Y	NA	RP5-968D22.3	C1orf114,BLZF1	IMR90	Hi-C	24141950	RP5-968D22.3	20992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	168489681	168489889	168489789	Y	XCL2,XCL1	RP5-968D22.3	LOC100505918,ATP1B1	IMR90	Hi-C	24141950	RP5-968D22.3	26799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	168504922	168505324	168504954	Y	XCL2,XCL1	RP5-968D22.3,XCL1	NA	NA	NA	NA	XCL1	38387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	169071998	169072131	169072049	Y	C1orf114,ATP1B1	ATP1B1	NA	NA	NA	NA	ATP1B1	804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	169443033	169443373	169443298	Y	NA	SLC19A2,AL021068.1	NA	NA	NA	NA	SLC19A2	9868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	169452813	169453010	169452905	Y	NA	SLC19A2,AL021068.1	NA	NA	NA	NA	SLC19A2	231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	169532682	169533387	169533357	Y	NA	F5	NA	NA	NA	NA	F5	20439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.407919925110675
chr1	169553917	169554291	169554075	Y	BLZF1,SLC19A2,SCYL3,F5	F5	NA	NA	NA	NA	F5	91	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr1	169834996	169835276	169835168	Y	NA	SCYL3	NA	NA	NA	NA	SCYL3	26132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	170042588	170042670	170042627	Y	C1orf112	KIFAP3	NA	NA	NA	NA	KIFAP3	9679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	170630769	170630992	170630884	Y	NA	NA	NA	NA	NA	NA	GORAB	131499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	171473011	171473311	171473138	Y	NA	PRRC2C	NA	NA	NA	NA	PRRC2C	20360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	172418117	172418641	172418353	Y	NA	PIGC	NA	NA	NA	NA	PIGC	6887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.516885406943419
chr1	172445364	172445579	172445472	Y	NA	PIGC	NA	NA	NA	NA	PIGC	34134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	172466564	172466703	172466653	Y	NA	NA	DNM3,DARS2,CENPL,C1orf9,C1orf105,FASLG	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIGC	55334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	172468818	172469289	172468991	Y	NA	NA	DNM3,DARS2,CENPL,C1orf9,C1orf105,FASLG	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIGC	57588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	172606833	172606931	172606882	Y	FASLG,C1orf9	NA	C1orf9,FASLG	IMR90	Hi-C	24141950	PIGC	195603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	173091914	173092434	173092232	Y	NA	NA	TNFSF4,LOC100506023	IMR90	Hi-C	24141950	TNFSF4	82018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	173092552	173092771	173092714	Y	NA	NA	TNFSF4,LOC100506023	IMR90	Hi-C	24141950	TNFSF4	81681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.976574075102978
chr1	173165720	173166046	173165883	Y	NA	TNFSF4	NA	NA	NA	NA	TNFSF4	8406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	173167258	173167319	173167289	Y	NA	TNFSF4	NA	NA	NA	NA	TNFSF4	7133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	173328578	173328674	173328661	Y	NA	NA	NA	NA	NA	NA	PRDX6	115731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	173392092	173392451	173392272	Y	NA	NA	NA	NA	NA	NA	PRDX6	51954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	173398914	173399297	173399234	Y	NA	PRDX6	NA	NA	NA	NA	PRDX6	45108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	173447359	173447668	173447399	Y	PRDX6	PRDX6	NA	NA	NA	NA	PRDX6	2954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr1	173909740	173909938	173909924	Y	RC3H1,ZBTB37	SERPINC1	NA	NA	NA	NA	SERPINC1	25224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	173984193	173984403	173984298	Y	GPR52,ZBTB37,RC3H1	RC3H1,RP11-160H22.3	NA	NA	NA	NA	RC3H1	5032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	174132741	174133010	174132876	Y	NA	RABGAP1L	NA	NA	NA	NA	RABGAP1L	6193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	174365403	174365798	174365601	Y	NA	NA	NA	NA	NA	NA	RABGAP1L	238855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	174788416	174788807	174788447	Y	NA	NA	NA	NA	NA	NA	CACYBP	177493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	175546934	175547327	175547131	Y	NA	NA	NA	NA	NA	NA	RP11-318C24.1	341784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	176079011	176079503	176079162	Y	NA	NA	NA	NA	NA	NA	RFWD2	95126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	176174471	176174980	176174673	Y	RFWD2	NA	NA	NA	NA	NA	RFWD2,RP11-195C7.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	178207948	178208160	178207999	Y	NA	NA	NA	NA	NA	NA	RASAL2	147084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	178231351	178231525	178231428	Y	NA	NA	NA	NA	NA	NA	RASAL2	170487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	178550500	178550885	178550674	Y	RALGPS2	C1orf220	C1orf220,MIR4424,RALGPS2,ANGPTL1,FAM20B	IMR90	Hi-C	24141950	C1orf220	40613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	178575191	178575363	178575289	Y	TOR3A,RALGPS2	NA	RALGPS2,ANGPTL1,FAM20B,C1orf220	IMR90	Hi-C	24141950	C1orf220	65304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	178901109	178901308	178901215	Y	NA	NA	NA	NA	NA	NA	ANGPTL1	62922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	178995927	178996290	178996175	Y	AXDND1,RALGPS2,TOR3A	FAM20B	NA	NA	NA	NA	FAM20B	2988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	179110934	179111289	179111201	Y	AXDND1,SOAT1,TOR3A,ABL2	NA	NA	NA	NA	NA	TOR3A	62422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	179997226	179997609	179997386	Y	TOR1AIP1,CEP350	NA	NA	NA	NA	NA	CEP350	75353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	180250812	180250948	180250921	Y	NA	NA	NA	NA	NA	NA	QSOX1	128843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	180251899	180252130	180252121	Y	NA	NA	NA	NA	NA	NA	QSOX1	129930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	180371123	180371295	180371283	Y	NA	NA	NA	NA	NA	NA	ACBD6	98794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	180389473	180389640	180389557	Y	NA	NA	LHX4,LOC100527964	IMR90	Hi-C	24141950	ACBD6	80449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	180403880	180403893	180403887	Y	NA	NA	NA	NA	NA	NA	ACBD6	66196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	180612177	180612184	180612181	Y	NA	XPR1	NA	NA	NA	NA	XPR1	13037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	180921044	180921090	180921069	Y	NA	NA	NA	NA	NA	NA	STX6	68957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	181068595	181069000	181068732	Y	NA	IER5	NA	NA	NA	NA	IER5	12957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	181074349	181074924	181074645	Y	XPR1,IER5	IER5	NA	NA	NA	NA	IER5	18711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr1	181081690	181081905	181081806	Y	NA	IER5	NA	NA	NA	NA	IER5	26052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	181082184	181082367	181082268	Y	NA	IER5	NA	NA	NA	NA	IER5	26546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	181096103	181096331	181096188	Y	NA	IER5	KIAA1614,IER5,STX6	IMR90	Hi-C	24141950	IER5	40465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	181097947	181098672	181098524	Y	MR1,IER5	IER5	STX6,ACBD6,MR1	IMR90	Hi-C	24141950	IER5	42309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	181104473	181105818	181105427	Y	STX6,MR1,IER5	IER5	STX6,ACBD6,MR1,XPR1,KIAA1614,IER5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IER5	48835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	181998739	181999134	181998891	Y	GLUL,GLUL	NA	ZNF648	MCF7	ChIA-PET	22265404	GLUL	360207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.418273980684771
chr1	182115300	182115596	182115569	Y	RNASEL,GLUL,GLUL	NA	GLUL	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	GLUL	243745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	182248717	182248735	182248728	Y	NA	NA	GLUL	K562	ChIA-PET	22265404	GLUL	110606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21102808941369
chr1	182274457	182274562	182274517	Y	NA	NA	GLUL	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	GLUL	84779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221873259552861
chr1	182585205	182585710	182585424	Y	NA	RNASEL	NA	NA	NA	NA	RNASEL	28814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	182998797	182999044	182998924	Y	NA	LAMC1	NA	NA	NA	NA	LAMC1	8202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr1	183811794	183811833	183811814	Y	NCF2,NCF2	NA	NA	NA	NA	NA	TSEN15	206978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr1	184005350	184005919	184005662	Y	RGL1,GLT25D2	TSEN15	RGL1	IMR90	Hi-C	24141950	TSEN15	12892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr1	184033703	184034036	184033838	Y	NA	TSEN15	NA	NA	NA	NA	TSEN15	14892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	184700299	184700688	184700567	Y	NA	EDEM3	NA	NA	NA	NA	EDEM3	21359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	184724887	184725142	184725036	Y	NA	EDEM3	NA	NA	NA	NA	EDEM3	2840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	185032022	185032401	185032047	Y	SWT1,SWT1,IVNS1ABP,RNF2	RNF2	NA	NA	NA	NA	RNF2	19526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	185109809	185110137	185110116	Y	IVNS1ABP	TRMT1L,SWT1	NA	NA	NA	NA	TRMT1L	14067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	185127324	185127657	185127491	Y	SWT1,SWT1	TRMT1L,SWT1	NA	NA	NA	NA	SWT1	3112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	185250433	185250655	185250484	Y	HMCN1,RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	33806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	185308384	185308771	185308525	Y	FAM129A,RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	NA	NA	NA	NA	IVNS1ABP	23923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	185315008	185315352	185315218	Y	RNF2,SWT1,SWT1,IVNS1ABP	IVNS1ABP	SWT1	IMR90	Hi-C	24141950	IVNS1ABP	30547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	185615541	185615870	185615591	Y	NA	NA	SWT1,LOC100288079,IVNS1ABP	IMR90	Hi-C	24141950	IVNS1ABP	331080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	192216449	192216576	192216513	Y	NA	NA	NA	NA	NA	NA	MIR4426	466737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	192485848	192486563	192486155	Y	RGS2,RGS1	NA	RGS1	IMR90	Hi-C	24141950	MIR4426	196750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	192953303	192953614	192953465	Y	RGS2,CDC73,TROVE2,TROVE2	NA	NA	NA	NA	NA	TROVE2	72938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	193073509	193073815	193073644	Y	NA	TROVE2,UCHL5,GLRX2,CDC73	NA	NA	NA	NA	GLRX2	265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	193080839	193080969	193080896	Y	NA	GLRX2,CDC73	NA	NA	NA	NA	GLRX2	7595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr1	193180704	193180924	193180776	Y	NA	NA	NA	NA	NA	NA	CDC73	91557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	193726401	193726456	193726429	Y	NA	NA	NA	NA	NA	NA	CDC73	637254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	197747792	197747875	197747834	Y	NA	DENND1B	NA	NA	NA	NA	DENND1B	4966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	197964894	197965254	197965077	Y	NA	NA	NA	NA	NA	NA	C1orf53	95117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.249483221738451
chr1	198127475	198127965	198127580	Y	NA	NEK7	NA	NA	NA	NA	NEK7	3382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	198128112	198128944	198128293	Y	PTPRC,DENND1B	NEK7	NA	NA	NA	NA	NEK7	4019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.364036797050936
chr1	198889384	198889935	198889528	Y	PTPRC	NA	NA	NA	NA	NA	RP11-104D3.2	464334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	200341273	200341515	200341438	Y	NA	RP11-532L16.1,ZNF281	NA	NA	NA	NA	ZNF281	35669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr1	200379777	200379959	200379899	Y	NA	ZNF281	NA	NA	NA	NA	ZNF281	2593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	200622357	200622464	200622411	Y	NA	KIF14,DDX59	NA	NA	NA	NA	DDX59	14633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	200783735	200784105	200783920	Y	NA	NA	NA	NA	NA	NA	C1orf106	74071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	200831452	200831819	200831500	Y	NA	C1orf106	NA	NA	NA	NA	C1orf106	26357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	200857233	200857815	200857711	Y	KIF21B	C1orf106	NA	NA	NA	NA	C1orf106	361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.603989117815075
chr1	200862818	200862950	200862864	Y	NA	C1orf106	NA	NA	NA	NA	C1orf106	4642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	200865264	200865418	200865332	Y	C1orf106,C1orf106	C1orf106	NA	NA	NA	NA	C1orf106	7088	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.11479480510648
chr1	200865457	200866265	200866098	Y	TMEM9,IGFN1,C1orf106,C1orf106	C1orf106	NA	NA	NA	NA	C1orf106	7281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3446434666748
chr1	201139670	201140154	201139905	Y	NA	TMEM9,IGFN1	KIF21B,IGFN1,LAD1	IMR90	Hi-C	24141950	TMEM9	968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr1	201472589	201472996	201472808	Y	LMOD1,CSRP1,CSRP1,CSRP1	PHLDA3,RP11-134G8.7,CSRP1	NA	NA	NA	NA	RP11-134G8.7	1373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3446434666748
chr1	201618983	201619286	201619160	Y	NA	NA	NA	NA	NA	NA	CSRP1	142399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	202003884	202004146	202004054	Y	NA	ELF3,RP11-465N4.4	NA	NA	NA	NA	RP11-465N4.4	26403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	202027341	202027750	202027511	Y	NA	RP11-465N4.4	RNPEP,ELF3,NAV1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-465N4.4	49860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	202045307	202045525	202045416	Y	PPP1R12B,ELF3	NA	NA	NA	NA	NA	ARL8A	66344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	202054141	202054434	202054309	Y	NA	NA	ELF3,IPO9,RNPEP,ARL8A,GPR37L1,TIMM17A,LGR6,NAV1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARL8A	57435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr1	202055098	202055409	202055277	Y	ELF3,GPR37L1	NA	ELF3,IPO9,RNPEP,ARL8A,GPR37L1,TIMM17A,LGR6,NAV1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARL8A	56460	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05875223774271
chr1	202217450	202217807	202217629	Y	NA	NA	NA	NA	NA	NA	UBE2T	91301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	202765097	202765528	202765162	Y	NA	RP11-480I12.2,KDM5B,PCAT6	NA	NA	NA	NA	KDM5B	11070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	202823240	202823502	202823372	Y	NA	KDM5B,PCAT6,RP11-480I12.5,RABIF	PPP1R12B,KDM5B,LOC641515,KLHL12,ADIPOR1,LOC148709,RABIF,CYB5R1,TMEM183A,LOC401980,SYT2	IMR90	Hi-C	24141950	RP11-480I12.5	5246	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	202872285	202872308	202872297	Y	NA	RP11-480I12.5,RABIF,HNRNPA1P59,KLHL12	RABIF	MCF7	ChIA-PET	22265404	HNRNPA1P59	6632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	203258547	203259334	203258830	Y	RABIF,KLHL12,BTG2	BTG2	NA	NA	NA	NA	BTG2	13285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	203259429	203259985	203259729	Y	RABIF,KLHL12,ADIPOR1,ADIPOR1,BTG2	BTG2	NA	NA	NA	NA	BTG2	12634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	203296328	203297068	203296686	Y	LAX1,RABIF,TMEM183A,TMEM183B,BTG2	BTG2,FMOD	NA	NA	NA	NA	FMOD	21549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	203481982	203482534	203482093	Y	BTG2,ATP2B4	NA	NA	NA	NA	NA	ATP2B4	111155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	203525711	203525894	203525744	Y	NA	NA	ATP2B4,PRELP,LAX1,ZC3H11A,OPTC,FMOD	IMR90	Hi-C	24141950	ATP2B4	67795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	204043987	204044379	204044133	Y	NA	SOX13	NA	NA	NA	NA	SOX13	3744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	204049581	204049822	204049645	Y	LAX1,PIK3C2B,SOX13	SOX13	NA	NA	NA	NA	SOX13	9338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	204053773	204053963	204053834	Y	NA	SOX13	NA	NA	NA	NA	SOX13	13530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	204238647	204239007	204238820	Y	GOLT1A,PLEKHA6	NA	NA	NA	NA	NA	GOLT1A	57427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	204358316	204358342	204358328	Y	NA	PPP1R15B	NA	NA	NA	NA	PPP1R15B	20577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.419096623677355
chr1	204363456	204363666	204363499	Y	NA	PPP1R15B	NA	NA	NA	NA	PPP1R15B	15253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	204476628	204477018	204476840	Y	NA	PIK3C2B,MDM4	MDM4,PPP1R15B,PIK3C2B	MCF7,K562	ChIA-PET	22265404	MDM4	6493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	204531285	204531644	204531490	Y	MDM4	MDM4	NA	NA	NA	NA	MDM4	47774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	205090261	205090406	205090392	Y	NA	RBBP5	CNTN2	IMR90	Hi-C	24141950	RBBP5	1118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	205173095	205173476	205173227	Y	CNTN2,RBBP5,CDK18	DSTYK,TMCC2	NA	NA	NA	NA	DSTYK	5251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	205179753	205180065	205179802	Y	NA	DSTYK,TMCC2	NA	NA	NA	NA	DSTYK	1026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	205227547	205227721	205227634	Y	TMEM81	DSTYK,TMCC2	NA	NA	NA	NA	TMCC2	32243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	205228000	205228129	205228064	Y	TMEM81,DSTYK,TMCC2	DSTYK,TMCC2	NA	NA	NA	NA	TMCC2	32696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	205262860	205263030	205262955	Y	CNTN2,CDK18	NUAK2	NA	NA	NA	NA	NUAK2	25853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	205263599	205264019	205263855	Y	NA	NUAK2	NA	NA	NA	NA	NUAK2	24864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.490589713922685
chr1	205267691	205267999	205267801	Y	NA	NUAK2	NA	NA	NA	NA	NUAK2	20884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr1	205270500	205270865	205270692	Y	NA	NUAK2,SNRPGP10	NA	NA	NA	NA	NUAK2	18018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.226638710040017
chr1	205288770	205288915	205288818	Y	TMEM81,RBBP5,NUAK2	SNRPGP10	NA	NA	NA	NA	NUAK2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	205410224	205410578	205410325	Y	DSTYK,TMCC2	LEMD1	NA	NA	NA	NA	LEMD1	12504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr1	205415918	205416307	205416148	Y	NA	LEMD1	NA	NA	NA	NA	LEMD1	6775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	205418015	205418182	205418073	Y	NA	LEMD1	NA	NA	NA	NA	LEMD1	4900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	205474556	205474866	205474575	Y	NA	CDK18	NA	NA	NA	NA	CDK18	2833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	205475126	205475451	205475289	Y	NA	CDK18	NA	NA	NA	NA	CDK18	3403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	206272966	206273628	206273277	Y	C1orf186	C1orf186,CTSE	NA	NA	NA	NA	C1orf186	13019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	206608344	206608425	206608385	Y	NA	IKBKE	NA	NA	NA	NA	IKBKE	33366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	206736469	206736632	206736474	Y	NA	RP11-534L20.4,EIF2D	NA	NA	NA	NA	RP11-534L20.4	36221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	206859136	206859493	206859328	Y	IKBKE,RASSF5,RASSF5,MAPKAPK2	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	2847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276601557751769
chr1	206859748	206860259	206859963	Y	IKBKE,RASSF5,FAIM3,FAIM3,MAPKAPK2	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	3459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	206861410	206861458	206861434	Y	NA	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	5121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	206879935	206880172	206880039	Y	NA	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	23646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	206892674	206892943	206892811	Y	NA	MAPKAPK2	NA	NA	NA	NA	MAPKAPK2	36385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	207265739	207265906	207265769	Y	NA	PFKFB2,YOD1,C4BPB,C4BPA	NA	NA	NA	NA	C4BPB	5552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr1	207413364	207413503	207413411	Y	IL19,CD55	NA	CD55	MCF7	ChIA-PET	22265404	CD55	79350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	207997315	207997832	207997786	Y	CR1,CD46	C1orf132	NA	NA	NA	NA	C1orf132	42663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	208021631	208021781	208021738	Y	CR1,CD46,PLXNA2,CD34	C1orf132	CD34	IMR90	Hi-C	24141950	C1orf132	18714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	208136912	208137268	208137107	Y	NA	NA	CD34,LOC148696,MIR29B2,MIR29C,PLXNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	C1orf132	96417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199520374026699
chr1	208335369	208335711	208335518	Y	NA	NA	NA	NA	NA	NA	PLXNA2	79954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	208381145	208381344	208381321	Y	NA	PLXNA2	NA	NA	NA	NA	PLXNA2	34321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	208388887	208389573	208389450	Y	NA	PLXNA2	NA	NA	NA	NA	PLXNA2	26092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	208418631	208418859	208418806	Y	PLXNA2	PLXNA2	NA	NA	NA	NA	PLXNA2	2966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	209827285	209827712	209827546	Y	LOC642587,IRF6,HSD11B1,LAMB3,LAMB3	LAMB3,G0S2	NA	NA	NA	NA	LAMB3	3474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	209978699	209978810	209978755	Y	LAMB3,LAMB3,IRF6	C1orf74,DIEXF	NA	NA	NA	NA	DIEXF	20542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	210812063	210812447	210812256	Y	HHAT,HHAT,KCNH1	NA	NA	NA	NA	NA	RNU5A-8P	266452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	211035320	211035533	211035504	Y	NA	NA	NA	NA	NA	NA	RP11-543B16.1	309286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chr1	211590216	211590571	211590445	Y	NA	LINC00467	NA	NA	NA	NA	LINC00467	36071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	211688648	211688771	211688711	Y	NA	NA	NEK2,RCOR3,TRAF5,LINC00467,RD3,SLC30A1,INTS7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC30A1	61313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr1	211780151	211780642	211780410	Y	NA	SLC30A1	SLC30A1	K562	ChIA-PET	22265404	SLC30A1	30067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.294680618963047
chr1	211950086	211950249	211950170	Y	NA	NA	NA	NA	NA	NA	LPGAT1	51865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	211976591	211977124	211977068	Y	NA	LPGAT1	NA	NA	NA	NA	LPGAT1	24990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	211998326	211998558	211998442	Y	NA	LPGAT1	NA	NA	NA	NA	LPGAT1	3556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	212102475	212102639	212102508	Y	NA	NA	NA	NA	NA	NA	LPGAT1	100361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	212113260	212113497	212113379	Y	NA	NA	NA	NA	NA	NA	INTS7	93387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	212256975	212257253	212257095	Y	DTL,INTS7	RPL21P28	NA	NA	NA	NA	RPL21P28	33604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	212291571	212291809	212291658	Y	PPP2R5A	NA	NA	NA	NA	NA	RPL21P28	68200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	212429433	212429795	212429457	Y	LPGAT1,PPP2R5A,ATF3,PPP2R5A	PPP2R5A	DTL	IMR90	Hi-C	24141950	PPP2R5A	27084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.554026270103322
chr1	212458080	212458253	212458113	Y	INTS7,PPP2R5A,PPP2R5A	PPP2R5A,RP11-384C4.3	NA	NA	NA	NA	PPP2R5A	1201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.335604191872761
chr1	212513330	212513719	212513465	Y	PPP2R5A,PPP2R5A,TMEM206,TMEM206	RP11-384C4.3	NA	NA	NA	NA	RP11-384C4.3	32470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr1	212731490	212732709	212732386	Y	NA	ATF3	ATF3	K562,MCF7	ChIA-PET	22265404	ATF3	3967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr1	212926000	212926318	212926233	Y	NA	NSL1,TATDN3	NA	NA	NA	NA	NSL1	36806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	213545455	213545863	213545754	Y	NA	NA	NA	NA	NA	NA	RPS6KC1	322866	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.60817315510364
chr1	214162828	214163073	214162948	Y	PROX1	PROX1	NA	NA	NA	NA	PROX1	8304	CAGE	HepG2 ENCODE	hg19	FANTOM5	15.1273610850456
chr1	214163432	214163790	214163677	Y	NA	PROX1	NA	NA	NA	NA	PROX1	8908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr1	214612784	214613126	214613017	Y	NA	NA	NA	NA	NA	NA	PTPN14	110666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221050616560276
chr1	214620076	214620672	214620502	Y	NA	NA	NA	NA	NA	NA	PTPN14	103120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	214712809	214712848	214712830	Y	NA	PTPN14	NA	NA	NA	NA	PTPN14	10944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	215741534	215741966	215741880	Y	KCTD3	KCTD3	NA	NA	NA	NA	KCTD3	2799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.240774963756723
chr1	218375582	218375888	218375735	Y	NA	NA	NA	NA	NA	NA	RRP15	80741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	218553747	218554148	218553928	Y	NA	TGFB2	NA	NA	NA	NA	TGFB2	36170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	218758903	218759111	218758977	Y	NA	NA	TGFB2	IMR90	Hi-C	24141950	TGFB2	241326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	219497403	219497406	219497405	Y	NA	NA	TGFB2,LOC728463,RRP15	IMR90	Hi-C	24141950	LYPLAL1	152217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	220093194	220093327	220093261	Y	NA	SLC30A10	NA	NA	NA	NA	SLC30A10	36662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	220189685	220189943	220189814	Y	NA	EPRS	NA	NA	NA	NA	EPRS	28057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	220359525	220359939	220359742	Y	NA	NA	NA	NA	NA	NA	MORF4L1P1	64973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	220399770	220399931	220399853	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	MORF4L1P1	24981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	220427006	220427444	220427299	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	MORF4L1P1	2094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr1	220443411	220443639	220443413	Y	NA	MORF4L1P1,RAB3GAP2	NA	NA	NA	NA	RAB3GAP2	157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	220671702	220671851	220671777	Y	MARK1	NA	MARK1	IMR90	Hi-C	24141950	C1orf115	189336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	220868801	220868862	220868831	Y	C1orf115,MOSC2,MOSC1	C1orf115	NA	NA	NA	NA	C1orf115	7614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr1	221135331	221135824	221135593	Y	HLX	NA	NA	NA	NA	NA	HLX	85632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	221273966	221274169	221274090	Y	HLX	NA	DUSP10,HLX	IMR90	Hi-C	24141950	HLX	224267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	221340978	221341184	221341062	Y	HLX	NA	NA	NA	NA	NA	HLX	291279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	221899063	221899285	221899220	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	14233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	221916049	221916599	221916319	Y	DUSP10,DUSP10	DUSP10	NA	NA	NA	NA	DUSP10	2531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr1	222638782	222639204	222638963	Y	NA	NA	DUSP10,MIA3,AIDA,BROX	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	HHIPL2	80241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.503080170047023
chr1	222814663	222814910	222814786	Y	NA	MIA3	NA	NA	NA	NA	MIA3	25235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	222828361	222828786	222828451	Y	TLR5	MIA3	NA	NA	NA	NA	MIA3	38933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	222829045	222829186	222829145	Y	NA	MIA3	NA	NA	NA	NA	MIA3	39617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	223964690	223965055	223964731	Y	TP53BP2,FBXO28	NA	NA	NA	NA	NA	TP53BP2	66619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	224012866	224013246	224013103	Y	NA	TP53BP2	NA	NA	NA	NA	TP53BP2	18428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	224014874	224015267	224015181	Y	CAPN2,FBXO28,TP53BP2	TP53BP2	NA	NA	NA	NA	TP53BP2	16407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	224024642	224024959	224024902	Y	NA	TP53BP2	NA	NA	NA	NA	TP53BP2	6715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	224032316	224032686	224032418	Y	CAPN2,FBXO28,TP53BP2	TP53BP2	NA	NA	NA	NA	TP53BP2	642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	224180261	224180516	224180350	Y	NA	NA	NA	NA	NA	NA	FBXO28	119273	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.99224583986347
chr1	224458940	224459060	224459002	Y	NA	NA	NA	NA	NA	NA	NVL	57029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	224528791	224528972	224528907	Y	NA	NVL,CNIH4	FBXO28,DEGS1,NVL,CNIH4,WDR26	IMR90	Hi-C	24141950	NVL	12702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	224545542	224546006	224545661	Y	FBXO28,CNIH4	NVL,CNIH4	NA	NA	NA	NA	CNIH4	2990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	224598124	224598418	224598271	Y	WDR26	WDR26	NA	NA	NA	NA	WDR26	24317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	225845408	225845613	225845516	Y	ENAH	ENAH,RP11-145A3.1	NA	NA	NA	NA	ENAH	6564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	225881856	225882162	225882024	Y	ACBD3	ENAH,RP11-145A3.1	ENAH,EPHX1,C1orf55,SRP9	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-145A3.1	4144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	225895377	225895885	225895482	Y	ENAH	RP11-145A3.1	ENAH,TMEM63A,SRP9,EPHX1	IMR90	Hi-C	24141950	RP11-145A3.1	9071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	225934674	225934968	225934833	Y	ENAH	RP11-145A3.1,SRP9	NA	NA	NA	NA	SRP9	28563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	225954708	225954967	225954837	Y	NA	SRP9,EPHX1	ENAH	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SRP9	8564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	226005413	226005573	226005512	Y	NA	SRP9,EPHX1	NA	NA	NA	NA	EPHX1	9619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	226084943	226085104	226084975	Y	LBR,H3F3A,C1orf55,TMEM63A	TMEM63A,LEFTY1,PYCR2	TMEM63A,LEFTY1,PYCR2	K562,MCF7	ChIA-PET	22265404	LEFTY1	11978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	226189681	226190319	226189910	Y	H3F3A,C1orf55	NA	NA	NA	NA	NA	H3F3A	57233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	226222205	226222589	226222509	Y	H3F3A,C1orf55	H3F3A	H3F3A,C1orf55	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	H3F3A	24963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	226263544	226263865	226263697	Y	C1orf55	H3F3A	NA	NA	NA	NA	H3F3A	15992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	226297611	226298113	226297674	Y	NA	NA	ACBD3,C1orf55,H3F3A,LIN9	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	H3F3A	50059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	226315308	226315548	226315420	Y	PARP1	NA	NA	NA	NA	NA	ACBD3	56883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr1	226315631	226315825	226315781	Y	PARP1,LIN9,PYCR2	NA	NA	NA	NA	NA	ACBD3	56606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.556163182260764
chr1	226361229	226361382	226361305	Y	NA	ACBD3,MIXL1	NA	NA	NA	NA	ACBD3	11049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	226430284	226430401	226430343	Y	NA	MIXL1	NA	NA	NA	NA	MIXL1	20965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	226435130	226435332	226435236	Y	PARP1,LIN9,SRP9,PYCR2,H3F3A	MIXL1	NA	NA	NA	NA	MIXL1	25811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr1	226841860	226842030	226841923	Y	ITPKB	NA	NA	NA	NA	NA	C1orf95	107359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	227315962	227315970	227315966	Y	NA	NA	NA	NA	NA	NA	CDC42BPA	188205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	227499470	227499818	227499796	Y	NA	CDC42BPA	NA	NA	NA	NA	CDC42BPA	4357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	227730002	227730151	227730029	Y	NA	ZNF678	WNT9A,ZNF678	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF678	19093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr1	228272073	228272409	228272248	Y	NA	ARF1,C1orf35,MRPL55	NA	NA	NA	NA	ARF1	3712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	228274281	228274680	228274319	Y	NA	ARF1,C1orf35,MRPL55	NA	NA	NA	NA	ARF1	5920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	228338299	228338457	228338378	Y	GJC2	C1orf35,MRPL55,GUK1,GJC2,IBA57	NA	NA	NA	NA	GJC2	2746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr1	228633222	228633907	228633608	Y	TRIM11,TRIM17,HIST3H2A	TRIM11,RP11-245P10.4,TRIM17,RNF187	NA	NA	NA	NA	TRIM17	30660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	228678228	228678435	228678266	Y	NA	RNF187	NA	NA	NA	NA	RNF187	5466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	228688608	228688902	228688729	Y	HIST3H2A	RNF187	NA	NA	NA	NA	RNF187	15846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	228782602	228782886	228782775	Y	NA	NA	NA	NA	NA	NA	RHOU	85938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.423862074164511
chr1	228783266	228783899	228783495	Y	C1orf35,TRIM11,HIST3H2A,RHOU	NA	NA	NA	NA	NA	RHOU	84925	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.2893337552773
chr1	228783962	228784250	228784107	Y	NA	NA	NA	NA	NA	NA	RHOU	84574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	228878269	228878481	228878411	Y	RHOU	RHOU	NA	NA	NA	NA	RHOU	9445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	228961848	228962129	228962045	Y	RHOU	NA	NA	NA	NA	NA	RHOU	93024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	228962635	228963190	228962905	Y	RHOU	NA	NA	NA	NA	NA	RHOU	93811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	228972324	228972426	228972361	Y	RHOU	NA	RHOU,RAB4A	IMR90	Hi-C	24141950	RHOU	103500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.528553220075173
chr1	228973832	228974198	228974019	Y	RHOU	NA	RHOU,RAB4A	IMR90	Hi-C	24141950	RHOU	105008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.435529887296266
chr1	229074291	229074557	229074548	Y	NA	NA	RHOU	IMR90	Hi-C	24141950	RHOU	205467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	229163343	229163424	229163384	Y	NA	NA	RHOU,NUP133	IMR90	Hi-C	24141950	RP5-1061H20.4	241351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	229268905	229269158	229269032	Y	NA	NA	RHOU,NUP133	IMR90	Hi-C	24141950	RP5-1061H20.4	135617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	229339200	229339557	229339342	Y	NA	NA	RHOU,NUP133,RAB4A	IMR90	Hi-C	24141950	RP5-1061H20.4	65218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr1	229357329	229357959	229357668	Y	RAB4A	RP5-1061H20.4,RAB4A	RHOU,C1orf96	IMR90	Hi-C	24141950	RP5-1061H20.4	46816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr1	229409656	229409997	229409713	Y	RAB4A	RP5-1061H20.4,RAB4A	NA	NA	NA	NA	RAB4A	4834	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.32260212166108
chr1	229473732	229474385	229474330	Y	NA	NA	NA	NA	NA	NA	RAB4A	68910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr1	229546837	229547142	229546975	Y	C1orf96,ACTA1	ACTA1	NA	NA	NA	NA	ACTA1	20703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	229601636	229601883	229601761	Y	NA	ACTA1,NUP133,RP4-613A2.1	NA	NA	NA	NA	ACTA1	33791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	229690998	229691240	229691190	Y	ABCB10	NUP133,RP4-613A2.1,ABCB10	NUP133	K562	ChIA-PET	22265404	ABCB10	1202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	229692979	229693368	229693287	Y	NUP133,TAF5L,ABCB10	ABCB10	NA	NA	NA	NA	ABCB10	537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	229825145	229825279	229825212	Y	NA	NA	TAF5L,URB2,GALNT2,PGBD5	IMR90	Hi-C	24141950	URB2	65164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	230061007	230061186	230061097	Y	ACTA1	NA	NA	NA	NA	NA	GALNT2	130350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	230089577	230089803	230089690	Y	NA	NA	NA	NA	NA	NA	GALNT2	101733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	230240540	230240902	230240735	Y	NA	GALNT2	NA	NA	NA	NA	GALNT2	49004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr1	230241590	230241986	230241849	Y	NA	NA	NA	NA	NA	NA	GALNT2	50054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.380801589097357
chr1	230248068	230248475	230248108	Y	NA	NA	NA	NA	NA	NA	GALNT2	56532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	230289705	230290142	230289903	Y	NA	NA	NA	NA	NA	NA	GALNT2	98169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr1	230407650	230408034	230407910	Y	NA	NA	NA	NA	NA	NA	GALNT2	216114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	230561990	230562633	230562303	Y	NA	NA	NA	NA	NA	NA	COG2	213602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	230887462	230887658	230887571	Y	NA	AGT	NA	NA	NA	NA	AGT	39419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	230889321	230889962	230889601	Y	NA	AGT	NA	NA	NA	NA	AGT	41278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr1	231036878	231036937	231036909	Y	NA	C1orf198	NA	NA	NA	NA	C1orf198	33543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	231038131	231038454	231038293	Y	COG2,TTC13,GNPAT,C1orf131	C1orf198	NA	NA	NA	NA	C1orf198	34796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	231083969	231084208	231084171	Y	NA	TTC13,ARV1	NA	NA	NA	NA	TTC13	28413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr1	231347338	231347496	231347363	Y	C1orf124	C1orf131,GNPAT	NA	NA	NA	NA	C1orf131	27437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	231531776	231531955	231531804	Y	NA	EGLN1	NA	NA	NA	NA	EGLN1	26835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr1	232107055	232107371	232107271	Y	NA	NA	NA	NA	NA	NA	DISC1	346494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	232735038	232735290	232735230	Y	NA	NA	TSNAX-DISC1	IMR90	Hi-C	24141950	RNU1-74P	230643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	232765644	232766127	232765957	Y	NA	NA	TSNAX-DISC1,DISC2,SIPA1L2,PCNXL2	IMR90	Hi-C	24141950	RNU1-74P	199806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	234163168	234163347	234163228	Y	SLC35F3	NA	NA	NA	NA	NA	RP5-827C21.2	327405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	234250535	234250574	234250556	Y	NA	NA	NA	NA	NA	NA	RP5-827C21.2	240178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	234548581	234548830	234548706	Y	NA	RP5-827C21.4	NA	NA	NA	NA	RP5-827C21.4	41242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	234639993	234640263	234640100	Y	NA	TARBP1	LOC100506810,RBM34,IRF2BP2,LINC00184,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TARBP1	27144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	234659231	234659760	234659519	Y	IRF2BP2	TARBP1	NA	NA	NA	NA	TARBP1	46382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	234680207	234680593	234680360	Y	NA	NA	LOC100506795,IRF2BP2	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	62678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	234681324	234681701	234681573	Y	NA	NA	LOC100506795,IRF2BP2	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	IRF2BP2	61570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	234728712	234729023	234728867	Y	NA	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	14248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	234736336	234736615	234736485	Y	IRF2BP2	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	6656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.848215262894097
chr1	234737347	234737653	234737498	Y	IRF2BP2	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	5618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr1	234738546	234738834	234738624	Y	IRF2BP2	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	4437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391155133064253
chr1	234746093	234747674	234747395	Y	IRF2BP2	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	2822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.647872245874813
chr1	234748100	234748931	234748566	Y	IRF2BP2	IRF2BP2,LINC00184	NA	NA	NA	NA	IRF2BP2	4829	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.07237687737208
chr1	234749342	234749645	234749570	Y	IRF2BP2	IRF2BP2,LINC00184	LINC00184,LOC100506810,ARID4B	IMR90	Hi-C	24141950	IRF2BP2	6071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.583773144446355
chr1	234752255	234752429	234752320	Y	NA	IRF2BP2,LINC00184	ARID4B,LOC100506795,IRF2BP2,LINC00184,LOC100506810	IMR90	Hi-C	24141950	IRF2BP2	8984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	234754264	234754665	234754337	Y	NA	IRF2BP2,LINC00184	ARID4B,LOC100506795,IRF2BP2,LINC00184,LOC100506810	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00184	8392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr1	234767593	234767925	234767750	Y	TARBP1	IRF2BP2,LINC00184	NA	NA	NA	NA	LINC00184	4536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr1	234812067	234812214	234812141	Y	NA	LINC00184,LINC01132	LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC01132	45575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr1	234852227	234852379	234852265	Y	NA	LINC01132	LOC100506810,TARBP1,LOC100506795,IRF2BP2,LINC00184,TOMM20	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC01132	5410	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.9143528344766
chr1	234857710	234858181	234857899	Y	NA	NA	NA	NA	NA	NA	LINC01132	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr1	234858843	234859287	234859154	Y	NA	LINC01132	NA	NA	NA	NA	LINC01132	1054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.469882114381692
chr1	234887087	234887295	234887193	Y	NA	LINC01132	NA	NA	NA	NA	LINC01132	29298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr1	234904523	234904710	234904671	Y	TARBP1	LINC01132	LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC01132	46734	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.35350316742421
chr1	234908151	234908764	234908277	Y	IRF2BP2	NA	IRF2BP2,LOC100506795,LINC00184,LOC100506810,TOMM20,RBM34	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	LINC01132	50362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr1	235010375	235010572	235010492	Y	ARID4B,ARID4B	NA	IRF2BP2,LOC100506810,LINC00184,TARBP1,TOMM20,RBM34	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	93237	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.10098956821008
chr1	235011316	235011428	235011382	Y	NA	NA	LINC00184,IRF2BP2,LOC100506810,TARBP1,LOC100506795,RBM34	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	92381	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.65649020522303
chr1	235012060	235012373	235012284	Y	IRF2BP2,ARID4B	NA	LINC00184,IRF2BP2,LOC100506810,TARBP1,LOC100506795,RBM34	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	91436	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.26862615573631
chr1	235091073	235091332	235091158	Y	IRF2BP2,ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	12477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr1	235094853	235095190	235094881	Y	RBM34,ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,TARBP1,LINC00184,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	8619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	235096560	235096855	235096619	Y	ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	6954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.547946550451309
chr1	235097868	235098070	235097979	Y	IRF2BP2,ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,TARBP1,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	5739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr1	235106929	235107153	235107059	Y	TARBP1,IRF2BP2,ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	3120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.272327733436886
chr1	235108971	235109355	235109264	Y	NA	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,LOC100506795	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.1	5162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	235110834	235111403	235111103	Y	IRF2BP2,ARID4B,ARID4B	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	3148	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.75165096176657
chr1	235114050	235115068	235114636	Y	IRF2BP2,ARID4B,ARID4B	RP11-443B7.1	IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.316210861496625
chr1	235122652	235122939	235122843	Y	NA	RP11-443B7.1,RP11-443B7.3	IRF2BP2,LOC100506810,LINC00184,LOC100506795,TARBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	8101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr1	235133014	235133422	235133155	Y	NA	RP11-443B7.1,RP11-443B7.3	LINC00184,LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	18463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.312759680174326
chr1	235134086	235134438	235134232	Y	NA	RP11-443B7.1,RP11-443B7.3	LINC00184,LOC100506810,IRF2BP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-443B7.3	19535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	235188116	235188420	235188313	Y	NA	NA	LINC00184,IRF2BP2	IMR90	Hi-C	24141950	RP11-443B7.3	73565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	235242252	235242564	235242410	Y	IRF2BP2,ARID4B,ARID4B	SNORA14B,TOMM20	IRF2BP2	MCF7	ChIA-PET	22265404	SNORA14B	46688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	235242792	235242999	235242934	Y	NA	SNORA14B,TOMM20	IRF2BP2	MCF7	ChIA-PET	22265404	SNORA14B	46253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr1	235246558	235246857	235246620	Y	ARID4B,ARID4B	SNORA14B,TOMM20	IRF2BP2	MCF7,K562	ChIA-PET	22265404	SNORA14B	42395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.262796832462573
chr1	235267591	235267744	235267678	Y	NA	SNORA14B,TOMM20	NA	NA	NA	NA	SNORA14B	21508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr1	235390754	235391125	235391097	Y	NA	NA	NA	NA	NA	NA	RBM34	67982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	235460869	235461278	235461096	Y	RBM34,ARID4B,ARID4B	GGPS1,ARID4B	NA	NA	NA	NA	GGPS1	27387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	235484403	235484795	235484782	Y	NA	GGPS1,ARID4B,TBCE	NA	NA	NA	NA	GGPS1	3870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	235644219	235644255	235644237	Y	NA	B3GALNT2	NA	NA	NA	NA	B3GALNT2	21526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr1	235668656	235669018	235668830	Y	RBM34,ARID4B,ARID4B	B3GALNT2	NA	NA	NA	NA	B3GALNT2	2875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr1	235805098	235806119	235805875	Y	LYST,RBM34,ARID4B,ARID4B	GNG4	NA	NA	NA	NA	GNG4	5935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	236103652	236103741	236103734	Y	NA	NA	LYST,NID1	IMR90	Hi-C	24141950	LYST	58712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	236230188	236230739	236230327	Y	LYST,LGALS8,GPR137B	NID1	NID1	IMR90	Hi-C	24141950	NID1	3726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr1	236431064	236431243	236431072	Y	LGALS8,ERO1LB	ERO1LB	NA	NA	NA	NA	ERO1LB	12076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr1	236658748	236658778	236658775	Y	NA	ENO1P1,LGALS8	NA	NA	NA	NA	ENO1P1	14283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.22565596930267
chr1	237007861	237008154	237008008	Y	NA	NA	NA	NA	NA	NA	MTR	51251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr1	238106545	238106849	238106747	Y	NA	NA	NA	NA	NA	NA	LINC01139	540474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	240306165	240306375	240306208	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	25080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	240306412	240306787	240306695	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	24668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.156459888959544
chr1	240306890	240307603	240307416	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr1	240307621	240308162	240308005	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	23293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr1	240308207	240308537	240308375	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	22918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.224501797882575
chr1	240308546	240308862	240308776	Y	NA	ADH5P3	NA	NA	NA	NA	ADH5P3	22593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr1	240433849	240434175	240434014	Y	NA	NA	NA	NA	NA	NA	ADH5P3	102394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	241670799	241671105	241670973	Y	KMO	FH	NA	NA	NA	NA	FH	9956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	241781298	241781471	241781421	Y	NA	CHML	NA	NA	NA	NA	CHML	15761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr1	241804319	241804678	241804577	Y	NA	CHML,OPN3	NA	NA	NA	NA	CHML	7087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr1	242108255	242108348	242108324	Y	NA	NA	EXO1	IMR90	Hi-C	24141950	EXO1	98986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.191303742217244
chr1	243487001	243487352	243487082	Y	CEP170,SDCCAG8	NA	NA	NA	NA	NA	SDCCAG8	69681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	243853401	243853550	243853530	Y	NA	NA	NA	NA	NA	NA	SDCCAG8	436081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	244094600	244094786	244094718	Y	NA	NA	NA	NA	NA	NA	ADSS	518650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	244210956	244211944	244211575	Y	NA	NA	NA	NA	NA	NA	ADSS	401492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr1	244212276	244213430	244213047	Y	NA	NA	NA	NA	NA	NA	ADSS	400006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr1	244321119	244321249	244321185	Y	NA	NA	SDCCAG8,AKT3,LOC339529,ZNF238	IMR90	Hi-C	24141950	ADSS	292187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	244613820	244614139	244614120	Y	NA	ADSS	NA	NA	NA	NA	ADSS	384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	244763140	244763529	244763408	Y	ADSS,EFCAB2	NA	NA	NA	NA	NA	ADSS	149704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	245255337	245255432	245255385	Y	NA	NA	NA	NA	NA	NA	EFCAB2	124330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr1	245971113	245971386	245971357	Y	NA	NA	NA	NA	NA	NA	SMYD3	697228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr1	246061196	246061440	246061372	Y	NA	NA	NA	NA	NA	NA	SMYD3	607174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr1	246316735	246316955	246316845	Y	NA	NA	NA	NA	NA	NA	SMYD3	351659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	246323685	246324051	246324002	Y	NA	NA	NA	NA	NA	NA	SMYD3	344563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	246432471	246432772	246432681	Y	SMYD3,CNST	NA	NA	NA	NA	NA	SMYD3	235842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	246862505	246862699	246862612	Y	SCCPDH	SCCPDH	NA	NA	NA	NA	SCCPDH	22650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr1	246948292	246948613	246948340	Y	NA	NA	NA	NA	NA	NA	SCCPDH	62943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.191303742217244
chr1	247035132	247035504	247035470	Y	CNST,ZNF669,AHCTF1	NA	NA	NA	NA	NA	AHCTF1	57776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr1	247093396	247093478	247093437	Y	NA	AHCTF1	NA	NA	NA	NA	AHCTF1	116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr1	247206107	247206337	247206222	Y	NA	ZNF695,ZNF670	NA	NA	NA	NA	ZNF670	33776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr1	247295865	247296225	247296038	Y	ZNF695,ZNF670,ZNF669	ZNF669	NA	NA	NA	NA	ZNF669	30191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr1	247297966	247298129	247298007	Y	NA	ZNF669	NA	NA	NA	NA	ZNF669	32292	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr1	247315116	247315371	247315289	Y	OR2G2,OR2G3,ZNF496,ZNF695,ZNF670,ZNF669	ZNF669,MIR3916	NA	NA	NA	NA	MIR3916	47991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr1	247326566	247327229	247326989	Y	NA	MIR3916	NA	NA	NA	NA	MIR3916	36133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr1	247511365	247511433	247511416	Y	NLRP3,NLRP3	ZNF496	ZNF670-ZNF695,AHCTF1,ZNF669,ZNF496	IMR90	Hi-C	24141950	ZNF496	18217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr1	249157308	249157673	249157562	Y	OR14I1,ZNF672,ZNF692,ZNF692	MIR3124,SH3BP5L,ZNF672,ZNF692,PGBD2	NA	NA	NA	NA	ZNF692	5965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.304543048364871
chr10	179287	179666	179475	Y	NA	ZMYND11	NA	NA	NA	NA	ZMYND11	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	431640	432008	431824	Y	TUBB8,ZMYND11,DIP2C	NA	NA	NA	NA	NA	ZMYND11	253235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	516106	516519	516355	Y	ZMYND11,ZMYND11,ZMYND11,ZMYND11,DIP2C	NA	NA	NA	NA	NA	DIP2C	217164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	699938	700531	700398	Y	DIP2C	DIP2C	NA	NA	NA	NA	DIP2C	33152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	916611	916806	916707	Y	NA	NA	NA	NA	NA	NA	LARP4B	58758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	958233	958518	958406	Y	NA	LARP4B	DIP2C,GTPBP4,LARP4B	IMR90	Hi-C	24141950	LARP4B	17046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	2939911	2940338	2940068	Y	NA	NA	LINC00200	IMR90	Hi-C	24141950	PFKP	166187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	3028046	3028193	3028123	Y	NA	NA	LINC00200	IMR90	Hi-C	24141950	PFKP	78332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	3088088	3088382	3088199	Y	NA	PFKP	PFKP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PFKP	18143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	3137708	3138098	3138049	Y	NA	PFKP	NA	NA	NA	NA	PFKP	31183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	3441336	3441600	3441518	Y	NA	NA	LOC338588,LOC100216001,KLF6	IMR90	Hi-C	24141950	PITRM1	228333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	3634689	3634961	3634809	Y	NA	NA	NA	NA	NA	NA	KLF6	190512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	3797195	3797502	3797389	Y	KLF6	KLF6	NA	NA	NA	NA	KLF6	27971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	3848037	3849536	3848891	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	22564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr10	3852273	3852886	3852712	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	26800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr10	3853393	3854169	3853583	Y	KLF6	KLF6	LOC100216001,LOC338588,KLF6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	27920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	3867491	3867713	3867639	Y	NA	KLF6	LOC338588,LOC100216001,KLF6	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KLF6	42018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	3881297	3881662	3881434	Y	NA	NA	KLF6,LOC100216001,LOC338588	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	KLF6	55824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	3893365	3894190	3893886	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	67892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr10	3928866	3929216	3928980	Y	KLF6	NA	LOC100216001,LOC338588,KLF6	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KLF6	103393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.283835448823878
chr10	3932191	3932411	3932301	Y	NA	NA	LOC100216001,LOC338588,KLF6	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF6	106718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr10	3948614	3948936	3948805	Y	NA	NA	LOC100216001,LOC338588,KLF6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KLF6	123141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr10	4705159	4705783	4705486	Y	NA	LINC00704	NA	NA	NA	NA	LINC00704	12563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	4775344	4775645	4775580	Y	NA	NA	LOC338588,LOC100216001,KLF6	MCF7	ChIA-PET	22265404	LINC00704	56998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	4775719	4776039	4775944	Y	NA	NA	LOC338588,LOC100216001	MCF7	ChIA-PET	22265404	LINC00704	57373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	4891874	4892173	4892030	Y	NA	AKR1C1	NA	NA	NA	NA	AKR1C1	40623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	4983862	4984222	4983900	Y	NA	NA	tAKR,AKR1C2,AKR1C3,UCN3,NET1,TUBAL3	IMR90	Hi-C	24141950	AKR1C1	51066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	4989909	4990226	4990068	Y	AKR1C3,AKR1C1	NA	tAKR,AKR1C2,AKR1C3,UCN3,NET1,TUBAL3	IMR90	Hi-C	24141950	AKR1C1	57113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269207568934898
chr10	5105953	5106270	5106114	Y	NA	AKR1C2,AKR1C3	NA	NA	NA	NA	AKR1C3	30407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	5113786	5114179	5114065	Y	AKR1C1,AKR1C2,AKR1C3	AKR1C3	NA	NA	NA	NA	AKR1C3	38240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280384267501579
chr10	5190490	5190854	5190731	Y	NA	AKR1C4	NA	NA	NA	NA	AKR1C4	44571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.262796832462573
chr10	5530637	5531333	5530982	Y	NA	NA	NA	NA	NA	NA	NET1	78123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr10	5535635	5536039	5535950	Y	NA	NA	NA	NA	NA	NA	NET1	83121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr10	5576341	5576485	5576413	Y	NET1,CALML3	NA	NA	NA	NA	NA	RP11-336A10.5	74271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.258854024968001
chr10	5587810	5588190	5587923	Y	NA	NA	NA	NA	NA	NA	RP11-336A10.5	62566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	5588881	5589169	5589084	Y	NET1,CALML3	NA	NA	NA	NA	NA	RP11-336A10.5	61587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	5590010	5590295	5590293	Y	NET1,CALML3	NA	NA	NA	NA	NA	RP11-336A10.5	60461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.250797490903309
chr10	5590507	5590769	5590638	Y	NA	NA	NA	NA	NA	NA	RP11-336A10.5	59987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.711640330482961
chr10	5590959	5591270	5591035	Y	NET1	NA	NA	NA	NA	NA	RP11-336A10.5	59486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.335604191872761
chr10	5596279	5596669	5596478	Y	NA	NA	NET1,ASB13	IMR90	Hi-C	24141950	RP11-336A10.5	54087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr10	5606609	5606845	5606776	Y	NA	RP11-336A10.5	NET1,CALML5	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-336A10.5	43911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	5707430	5707726	5707563	Y	NA	RP11-336A10.7,ASB13,FAM208B	NA	NA	NA	NA	ASB13	872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	5783071	5783414	5783247	Y	NA	NA	GDI2	IMR90	Hi-C	24141950	FAM208B	58270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	6242613	6242903	6242648	Y	IL15RA,PFKFB3,PFKFB3	NA	NA	NA	NA	NA	PFKFB3	57732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr10	6243287	6243821	6243659	Y	PFKFB3,PFKFB3	NA	NA	NA	NA	NA	PFKFB3	58406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr10	6316063	6316267	6316156	Y	NA	NA	LOC399715	IMR90	Hi-C	24141950	PFKFB3	131182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	6333794	6333936	6333889	Y	PFKFB3,PRKCQ	NA	NA	NA	NA	NA	PFKFB3	148913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	6440433	6440653	6440526	Y	IL15RA,PFKFB3,PFKFB3	NA	IL2RA,PFKFB3,LOC399715,FBXO18,RBM17,IL15RA,PRKCQ	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRKCQ	179610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	7583205	7583490	7583242	Y	NA	NA	NA	NA	NA	NA	ITIH5	123471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.450980410177829
chr10	7583796	7584039	7583868	Y	NA	NA	NA	NA	NA	NA	ITIH5	122922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr10	7667725	7668107	7668024	Y	NA	ITIH5	NA	NA	NA	NA	ITIH5	38854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	7709539	7709689	7709614	Y	ITIH5	ITIH5,ITIH2	NA	NA	NA	NA	ITIH5	2578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr10	7743467	7743545	7743506	Y	NA	ITIH5,ITIH2	NA	NA	NA	NA	ITIH2	235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	7998591	7998768	7998645	Y	NA	NA	NA	NA	NA	NA	TAF3	140124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	8662161	8662543	8662250	Y	NA	NA	NA	NA	NA	NA	TAF3	803694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr10	11652835	11653073	11652954	Y	CELF2,USP6NL	USP6NL	NA	NA	NA	NA	USP6NL	1082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	11835953	11836243	11836176	Y	C10orf47	NA	NA	NA	NA	NA	PROSER2-AS1	98456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	11917828	11918087	11917940	Y	C10orf47	PROSER2-AS1	NA	NA	NA	NA	PROSER2-AS1	16612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.554026270103322
chr10	11940492	11940889	11940732	Y	NA	PROSER2-AS1	NA	NA	NA	NA	PROSER2-AS1	5793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	12195131	12195251	12195172	Y	CAMK1D	SEC61A2,CDC123,NUDT5	NA	NA	NA	NA	SEC61A2	25495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	12283843	12284276	12283949	Y	UPF2,UPF2,SEC61A2,CAMK1D	CDC123,NUDT5	NA	NA	NA	NA	NUDT5	47700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	13388296	13388525	13388411	Y	NA	PHYH	NA	NA	NA	NA	SEPHS1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	13390886	13391219	13391148	Y	NA	PHYH,SEPHS1	NA	NA	NA	NA	SEPHS1	2589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	13391797	13392252	13392084	Y	SEPHS1	PHYH,SEPHS1	NA	NA	NA	NA	SEPHS1	3500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.197714478689568
chr10	13807715	13808056	13807951	Y	NA	NA	NA	NA	NA	NA	PRPF18	180788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	14592372	14592822	14592665	Y	NA	NA	NA	NA	NA	NA	FRMD4A	90231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr10	14601403	14601956	14601622	Y	DCLRE1C	NA	NA	NA	NA	NA	FRMD4A	99262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	14624029	14624329	14624184	Y	DCLRE1C	NA	NA	NA	NA	NA	FRMD4A	121888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	14641847	14641963	14641950	Y	NA	NA	NA	NA	NA	NA	FRMD4A	139706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	14955590	14955884	14955736	Y	HSPA14,SUV39H2,SUV39H2,SUV39H2	SUV39H2,DCLRE1C,MEIG1	NA	NA	NA	NA	SUV39H2	36771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	15157630	15158203	15157954	Y	NA	ACBD7,RPP38,C10orf111	NA	NA	NA	NA	C10orf111	20312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	15158719	15159034	15158939	Y	NA	ACBD7,RPP38,C10orf111,NMT2	NA	NA	NA	NA	C10orf111	21401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	15178441	15178844	15178745	Y	NA	ACBD7,RPP38,C10orf111,NMT2	NA	NA	NA	NA	NMT2	29848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr10	15179834	15179919	15179877	Y	NA	RPP38,C10orf111,NMT2	NA	NA	NA	NA	NMT2	28773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	15191044	15191371	15191092	Y	MEIG1,NMT2,C10orf111	NMT2	NA	NA	NA	NA	NMT2	17321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	15386960	15387149	15387011	Y	NMT2	FAM171A1	NA	NA	NA	NA	FAM171A1	23912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr10	16829476	16829735	16829602	Y	TRDMT1	RSU1	NA	NA	NA	NA	RSU1	27792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	17115851	17116065	17115955	Y	VIM	NA	NA	NA	NA	NA	CUBN	53765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	17697506	17697813	17697679	Y	ST8SIA6,STAM	PTPLA,STAM	NA	NA	NA	NA	STAM	13382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	17707752	17708081	17707913	Y	VIM,ST8SIA6,STAM	STAM	NA	NA	NA	NA	STAM	23628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	17755362	17755412	17755398	Y	SLC39A12	NA	NA	NA	NA	NA	STAM	71238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	18860767	18861138	18861132	Y	NA	RP11-499P20.2	NA	NA	NA	NA	RP11-499P20.2	28187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr10	18897565	18897858	18897712	Y	NSUN6,ARL5B	NSUN6,ARL5B-AS1,ARL5B	NA	NA	NA	NA	NSUN6	40693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	19918600	19918708	19918654	Y	NA	NA	NA	NA	NA	NA	PLXDC2	184460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	19927503	19927756	19927630	Y	NA	NA	NA	NA	NA	NA	PLXDC2	175412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	19943656	19943825	19943742	Y	NA	NA	ARL5B,NSUN6	IMR90	Hi-C	24141950	PLXDC2	159343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	20118701	20118910	20118781	Y	NA	PLXDC2	NA	NA	NA	NA	PLXDC2	15533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	20126415	20126499	20126449	Y	NA	PLXDC2	NA	NA	NA	NA	PLXDC2	23247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	20203114	20203263	20203197	Y	NA	NA	NA	NA	NA	NA	PLXDC2	99946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	20388455	20388625	20388609	Y	PLXDC2	NA	NA	NA	NA	NA	PLXDC2	285287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	20446340	20446583	20446461	Y	NA	NA	NA	NA	NA	NA	PLXDC2	343172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	20450242	20450397	20450276	Y	PLXDC2	NA	NA	NA	NA	NA	PLXDC2	347074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	20616910	20617089	20617020	Y	NA	NA	NA	NA	NA	NA	PLXDC2	513742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	21317807	21317920	21317859	Y	C10orf113	NA	NA	NA	NA	NA	MLLT10	503174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	21703520	21703700	21703684	Y	NA	NA	MLLT10	IMR90	Hi-C	24141950	MLLT10	117394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	21716825	21717072	21716945	Y	MLLT10,MLLT10	NA	NA	NA	NA	NA	MLLT10	104022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	21799318	21799715	21799601	Y	C10orf113	MLLT10	NA	NA	NA	NA	MLLT10	21379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	21809167	21809536	21809441	Y	C10orf114,C10orf140	MLLT10	NA	NA	NA	NA	MLLT10	11558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	21816029	21816444	21816223	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	4650	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.70546980059023
chr10	21816987	21817223	21817104	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	3871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	21824374	21824606	21824490	Y	NA	MLLT10	NA	NA	NA	NA	MLLT10	3280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	21991974	21992366	21992143	Y	NA	NA	NA	NA	NA	NA	MLLT10	170880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	22026318	22026683	22026671	Y	EBLN1	NA	NA	NA	NA	NA	RN7SKP37	193389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	22046684	22046874	22046779	Y	NA	NA	NA	NA	NA	NA	RN7SKP37	173198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.349740445589467
chr10	22535914	22536341	22536050	Y	NA	NA	ARMC3,LOC100130992	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	COMMD3	66562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	22628998	22629520	22629110	Y	EBLN1	COMMD3,BMI1	NA	NA	NA	NA	BMI1	20858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	22629825	22629981	22629966	Y	DNAJC1	COMMD3,BMI1	NA	NA	NA	NA	BMI1	21685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	22630393	22630515	22630474	Y	NA	COMMD3,BMI1	NA	NA	NA	NA	BMI1	22253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	22870490	22870524	22870509	Y	NA	NA	NA	NA	NA	NA	PIP4K2A	130960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr10	22886209	22886449	22886322	Y	PIP4K2A	NA	NA	NA	NA	NA	PIP4K2A	115035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	22904639	22904845	22904818	Y	PIP4K2A	NA	NA	NA	NA	NA	PIP4K2A	96639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr10	22907073	22907416	22907362	Y	NA	NA	NA	NA	NA	NA	PIP4K2A	94068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	22961361	22961802	22961720	Y	NA	PIP4K2A	NA	NA	NA	NA	PIP4K2A	39682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	22970665	22970972	22970902	Y	NA	PIP4K2A	NA	NA	NA	NA	PIP4K2A	30512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr10	22972039	22972536	22972328	Y	NA	PIP4K2A	NA	NA	NA	NA	PIP4K2A	28948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.339878016187644
chr10	24498955	24499204	24499146	Y	KIAA1217	NA	NA	NA	NA	NA	ARHGAP21	511393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	24740338	24740618	24740546	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	269979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	24772710	24773084	24772822	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	237513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	24858253	24858468	24858359	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	152129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	24917417	24917574	24917542	Y	NA	NA	NA	NA	NA	NA	ARHGAP21	93023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	24925603	24925785	24925693	Y	ARHGAP21	NA	NA	NA	NA	NA	ARHGAP21	84812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	25348919	25349256	25349121	Y	NA	THNSL1	ARHGAP21,PRTFDC1,ENKUR,THNSL1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	THNSL1	45332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	25357102	25357468	25357353	Y	NA	NA	ARHGAP21	IMR90	Hi-C	24141950	THNSL1	53515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	26719871	26720136	26720034	Y	PDSS1,ABI1,APBB1IP	NA	NA	NA	NA	NA	PDSS1	264452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	26775274	26775560	26775412	Y	APBB1IP,PDSS1,ABI1	NA	NA	NA	NA	NA	PDSS1	209028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	26926445	26926942	26926622	Y	NA	NA	NA	NA	NA	NA	PDSS1	57646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	27026601	27027004	27026841	Y	MASTL,APBB1IP,PDSS1,ABI1	PDSS1	NA	NA	NA	NA	PDSS1	42013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	27032794	27033066	27033024	Y	NA	PDSS1	NA	NA	NA	NA	PDSS1	48206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	27354652	27354729	27354695	Y	NA	ANKRD26	NA	NA	NA	NA	ANKRD26	32692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr10	27531769	27532240	27532024	Y	ABI1,ANKRD26,YME1L1,MASTL,ACBD5	ACBD5	NA	NA	NA	NA	ACBD5	2710	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.63184030979466
chr10	28479939	28480308	28480124	Y	NA	NA	NA	NA	NA	NA	MPP7	141107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	28590569	28590776	28590673	Y	NA	MPP7	MPP7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MPP7	30639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	28957755	28957993	28957831	Y	BAMBI	BAMBI	BAMBI	K562	ChIA-PET	22265404	BAMBI	6278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	29010919	29011116	29010957	Y	NA	BAMBI	LYZL1,BAMBI	IMR90	Hi-C	24141950	BAMBI	46648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	29228333	29228416	29228371	Y	NA	NA	BAMBI,LOC100507605,LYZL1	IMR90	Hi-C	24141950	BAMBI	264062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.384744396591929
chr10	29228763	29229094	29228981	Y	NA	NA	BAMBI,LOC100507605,LYZL1	IMR90	Hi-C	24141950	BAMBI	264492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.788721514208031
chr10	29615988	29616104	29616046	Y	NA	NA	NA	NA	NA	NA	PTCHD3P1	80227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.592812419248394
chr10	29761620	29761743	29761682	Y	NA	NA	NA	NA	NA	NA	PTCHD3P1	65289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	29845158	29845363	29845275	Y	SVIL	NA	NA	NA	NA	NA	PTCHD3P1	148827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	29879091	29879350	29879257	Y	SVIL	NA	NA	NA	NA	NA	SVIL	144360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	29909517	29909915	29909733	Y	NA	NA	NA	NA	NA	NA	SVIL	113795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	29948331	29948643	29948337	Y	NA	NA	NA	NA	NA	NA	SVIL	75067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr10	29970673	29971027	29970896	Y	SVIL	NA	NA	NA	NA	NA	SVIL	52683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	30073207	30073608	30073571	Y	SVIL	SVIL	SVIL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SVIL	49497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	30092989	30093361	30093263	Y	SVIL	NA	SVIL,KIAA1462,MIR604	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SVIL	69279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	30742798	30743130	30743073	Y	NA	MAP3K8	NA	NA	NA	NA	MAP3K8	21932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	30831188	30831972	30831674	Y	MAP3K8,ZNF438,ZNF438	NA	MAP3K8,LOC729668,KIAA1462,LYZL2	IMR90	Hi-C	24141950	MAP3K8	110322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	30876225	30877110	30876753	Y	MAP3K8,ZNF438,ZNF438	NA	LOC729668,MAP3K8	IMR90	Hi-C	24141950	MAP3K8	155359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	32047879	32048374	32048138	Y	ZEB1	NA	ZNF438,ZEB1,ARHGAP12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	167368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	32048872	32049424	32049213	Y	ZEB1,KIF5B	NA	ZNF438,ZEB1,ARHGAP12,LYZL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	166318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434707244303682
chr10	32215994	32216410	32215998	Y	NA	ARHGAP12	NA	NA	NA	NA	ARHGAP12	252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	32218329	32218518	32218508	Y	NA	ARHGAP12	NA	NA	NA	NA	ARHGAP12	2587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285149717988735
chr10	32233498	32233707	32233615	Y	NA	ARHGAP12	ARHGAP12,KIF5B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP12	17756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	32301568	32301771	32301670	Y	NA	KIF5B	NA	NA	NA	NA	KIF5B	41588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	32335843	32336217	32336161	Y	NA	KIF5B	NA	NA	NA	NA	KIF5B	7142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	32611846	32612286	32612204	Y	EPC1	NA	NA	NA	NA	NA	EPC1	53440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	32621222	32621521	32621374	Y	ARHGAP12,CCDC7,C10orf68,EPC1	EPC1	NA	NA	NA	NA	EPC1	44205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr10	32639699	32640002	32639940	Y	NA	EPC1	EPC1,C10orf68	IMR90	Hi-C	24141950	EPC1	25724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	33250851	33251304	33251058	Y	NA	RP11-462L8.1,ITGB1	NA	NA	NA	NA	RP11-462L8.1	5078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	33269452	33269916	33269602	Y	C10orf68	RP11-462L8.1,ITGB1	ITGB1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ITGB1	22804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.497652174312046
chr10	33297744	33297972	33297858	Y	NA	ITGB1	ITGB1,C10orf68,PARD3	IMR90	Hi-C	24141950	ITGB1	5024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	33422989	33423776	33423207	Y	NA	NA	ITGB1	IMR90	Hi-C	24141950	ITGB1	130269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	33537661	33538041	33537751	Y	NA	NA	NA	NA	NA	NA	NRP1	85149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	33541909	33542109	33542065	Y	NA	NA	NA	NA	NA	NA	NRP1	81081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	33797044	33797241	33797114	Y	NA	NA	PARD3	IMR90	Hi-C	24141950	NRP1	173854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	33798158	33798349	33798267	Y	NA	NA	PARD3	IMR90	Hi-C	24141950	NRP1	174968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268876552114587
chr10	34165036	34165196	34165116	Y	NA	NA	PARD3	IMR90	Hi-C	24141950	NRP1	541846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	34307238	34307364	34307297	Y	NA	NA	NRP1,PARD3	IMR90	Hi-C	24141950	RP11-8L18.3	643665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	34569605	34569879	34569742	Y	NA	NA	NA	NA	NA	NA	RP11-8L18.3	381150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	34815006	34815362	34815018	Y	NA	NA	NA	NA	NA	NA	RP11-8L18.3	135667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	34922261	34922558	34922409	Y	PARD3	RP11-8L18.3	NA	NA	NA	NA	RP11-8L18.3	28471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	35028968	35029134	35029048	Y	NA	NA	NA	NA	NA	NA	PARD3	73119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	35059349	35059608	35059479	Y	NA	PARD3	NA	NA	NA	NA	PARD3	42645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	35080769	35081009	35080876	Y	NA	PARD3	NA	NA	NA	NA	PARD3	21244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	35102675	35103059	35102787	Y	NA	PARD3	NA	NA	NA	NA	PARD3	422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr10	35195075	35195256	35195166	Y	NA	SS18L2P1	PARD3	IMR90	Hi-C	24141950	SS18L2P1	32937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	35438214	35438795	35438573	Y	CREM,CREM	CREM	NA	NA	NA	NA	CREM	24495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	38149659	38150080	38149945	Y	ZNF248	RP11-162G10.1,RP11-162G10.5,ZNF248	NA	NA	NA	NA	ZNF248	4625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	38325428	38325718	38325598	Y	ZNF25,ZNF37A	ZNF33A	NA	NA	NA	NA	ZNF33A	27850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	43633157	43633403	43633253	Y	RASGEF1A	CSGALNACT2	NA	NA	NA	NA	CSGALNACT2	1223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.431256062981383
chr10	43872885	43873113	43872972	Y	NA	HNRNPF,RP11-517P14.2	NA	NA	NA	NA	HNRNPF	29501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr10	43905259	43905708	43905446	Y	HNRNPF,HNRNPF,HNRNPF	HNRNPF,RP11-517P14.2	NA	NA	NA	NA	HNRNPF	2645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr10	43913618	43913796	43913710	Y	CSGALNACT2,HNRNPF	HNRNPF,RP11-517P14.2	ZNF487P	K562,MCF7	ChIA-PET	22265404	RP11-517P14.2	390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	43950893	43951349	43951098	Y	NA	HNRNPF,RP11-517P14.2	NA	NA	NA	NA	RP11-517P14.2	36707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.99202459798454
chr10	44100382	44100859	44100681	Y	CSGALNACT2	CAP1P2,ZNF485,ZNF32	NA	NA	NA	NA	ZNF485	527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	44359364	44359693	44359433	Y	NA	NA	NA	NA	NA	NA	HNRNPA3P1	75499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr10	44373947	44374132	44374049	Y	NA	NA	NA	NA	NA	NA	HNRNPA3P1	90082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	45434472	45434743	45434608	Y	OR13A1,ALOX5	RASSF4,C10orf10	NA	NA	NA	NA	RASSF4	18112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	45442892	45443532	45443384	Y	ALOX5	RASSF4,C10orf10	NA	NA	NA	NA	RASSF4	9323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	45459640	45459966	45459787	Y	NA	RASSF4,C10orf10	NA	NA	NA	NA	RASSF4	6785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	45461456	45461865	45461640	Y	OR13A1,ALOX5	RASSF4,C10orf10	NA	NA	NA	NA	RASSF4	8601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	45464299	45464380	45464314	Y	ZNF22,C10orf25	RASSF4,C10orf10	NA	NA	NA	NA	C10orf10	7878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	45470476	45470795	45470517	Y	NA	RASSF4,C10orf10	NA	NA	NA	NA	C10orf10	1463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	45491341	45491670	45491510	Y	C10orf10	RASSF4,C10orf10	NA	NA	NA	NA	C10orf10	19083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	45491838	45491921	45491882	Y	C10orf10	RASSF4,C10orf10	NA	NA	NA	NA	C10orf10	19580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	45868742	45869084	45868822	Y	ANUBL1,OR13A1,ALOX5	NA	NA	NA	NA	NA	MARCH8	219270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	45965771	45965877	45965832	Y	NA	NA	NA	NA	NA	NA	MARCH8	122477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	46053091	46053211	46053151	Y	NA	MARCH8	NA	NA	NA	NA	MARCH8	35143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr10	47092142	47092537	47092340	Y	NA	NA	NA	NA	NA	NA	SYT15	122742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr10	49966592	49966691	49966640	Y	NA	NA	NA	NA	NA	NA	MAPK8	453894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	50571042	50571294	50571254	Y	C10orf128	NA	NA	NA	NA	NA	PGBD3	173792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	50742859	50743547	50743006	Y	NA	PGBD3,ERCC6	NA	NA	NA	NA	PGBD3	1539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	51039519	51039692	51039605	Y	NA	NA	NA	NA	NA	NA	OGDHL	71094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	51045236	51045418	51045327	Y	NA	NA	NA	NA	NA	NA	OGDHL	76811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	51488946	51489392	51489137	Y	NCOA4,NCOA4,NCOA4	RP11-109G10.2	NA	NA	NA	NA	RP11-109G10.2	41180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	51574472	51574922	51574693	Y	FAM21A,NCOA4,NCOA4	RP11-109G10.2,NCOA4	NA	NA	NA	NA	NCOA4	11364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	52153406	52153805	52153735	Y	FAM21A	NA	NA	NA	NA	NA	DYNC1I2P1	130668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr10	52167205	52167434	52167402	Y	NA	NA	NA	NA	NA	NA	DYNC1I2P1	144467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	52329586	52329716	52329651	Y	NA	NA	NA	NA	NA	NA	SGMS1	53207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	52385542	52385659	52385602	Y	NA	SGMS1	NA	NA	NA	NA	SGMS1	2619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr10	52613516	52613853	52613685	Y	A1CF	A1CF	NA	NA	NA	NA	A1CF	29582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr10	54138059	54138390	54138182	Y	DKK1	NA	NA	NA	NA	NA	DKK1	66003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.316210861496625
chr10	54212715	54213183	54212814	Y	NA	NA	LOC100506939,DKK1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	DKK1	140659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	54317967	54318032	54318000	Y	NA	NA	LOC100506939,DKK1	IMR90	Hi-C	24141950	RP11-556E13.1	195137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	54329490	54329893	54329885	Y	NA	NA	LOC100506939,DKK1,PRKG1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-556E13.1	183276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr10	54412187	54412602	54412476	Y	NA	NA	NA	NA	NA	NA	RP11-556E13.1	100567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	54434489	54434618	54434547	Y	NA	NA	NA	NA	NA	NA	RP11-556E13.1	78551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	54438333	54438755	54438445	Y	NA	NA	NA	NA	NA	NA	RP11-556E13.1	74414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	54439258	54439686	54439443	Y	NA	NA	NA	NA	NA	NA	RP11-556E13.1	73483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	54454130	54454506	54454318	Y	NA	NA	NA	NA	NA	NA	RP11-556E13.1	58663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	54466498	54466779	54466584	Y	NA	RP11-556E13.1	NA	NA	NA	NA	RP11-556E13.1	46390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	54471417	54471775	54471523	Y	NA	RP11-556E13.1	NA	NA	NA	NA	RP11-556E13.1	41394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	54506041	54506302	54506141	Y	NA	RP11-556E13.1,MBL2	NA	NA	NA	NA	RP11-556E13.1	6867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr10	54512756	54513128	54512977	Y	NA	RP11-556E13.1,MBL2	NA	NA	NA	NA	RP11-556E13.1	41	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr10	54529752	54530157	54530006	Y	NA	RP11-556E13.1,MBL2	NA	NA	NA	NA	MBL2	292	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	59388391	59388635	59388513	Y	NA	NA	NA	NA	NA	NA	IPMK	637059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	60723596	60723953	60723675	Y	PHYHIPL,PHYHIPL,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	210397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr10	60727421	60727594	60727472	Y	PHYHIPL,PHYHIPL,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	206756	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.42361218939343
chr10	60796573	60796761	60796671	Y	NA	NA	NA	NA	NA	NA	PHYHIPL	137589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	60935384	60935742	60935425	Y	NA	PHYHIPL	NA	NA	NA	NA	PHYHIPL	1034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.657403146849126
chr10	60949726	60949909	60949819	Y	NA	PHYHIPL	NA	NA	NA	NA	PHYHIPL	15376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	61019605	61019954	61019626	Y	PHYHIPL,PHYHIPL,SLC16A9,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	85255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr10	61024836	61025127	61024964	Y	PHYHIPL,PHYHIPL,SLC16A9,FAM13C,FAM13C	NA	NA	NA	NA	NA	PHYHIPL	90486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	61632760	61633170	61633000	Y	NA	CCDC6	NA	NA	NA	NA	CCDC6	31244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	61639238	61639777	61639520	Y	NA	CCDC6	NA	NA	NA	NA	CCDC6	24637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	61645173	61645419	61645305	Y	NA	CCDC6	NA	NA	NA	NA	CCDC6	18995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	61665210	61665415	61665365	Y	NA	CCDC6	NA	NA	NA	NA	CCDC6	796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	61997048	61997297	61997111	Y	NA	NA	NA	NA	NA	NA	CCDC6	332634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	62674070	62674082	62674076	Y	NA	NA	NA	NA	NA	NA	RHOBTB1	85116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	62726963	62727263	62727113	Y	NA	RHOBTB1	NA	NA	NA	NA	RHOBTB1	31935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268384925942314
chr10	63663540	63663817	63663641	Y	ARID5B	ARID5B	NA	NA	NA	NA	ARID5B	4481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr10	63702592	63703184	63702855	Y	ARID5B	ARID5B	NA	NA	NA	NA	ARID5B	43533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	63736420	63736602	63736437	Y	NA	NA	NA	NA	NA	NA	ARID5B	77361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr10	63752119	63752912	63752632	Y	ARID5B	NA	NA	NA	NA	NA	ARID5B	93060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	63779948	63780456	63780395	Y	ARID5B	NA	NA	NA	NA	NA	ARID5B	120889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	63839926	63839992	63839961	Y	NA	NA	NA	NA	NA	NA	ARID5B	180867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	63842469	63842743	63842551	Y	ARID5B	NA	NA	NA	NA	NA	ARID5B	183410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	64004719	64005076	64004899	Y	ARID5B	RTKN2	NA	NA	NA	NA	RTKN2	21390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	64875678	64875783	64875732	Y	NA	NRBF2	ZNF365,ADO,NRBF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NRBF2	15267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	65078745	65079133	65078939	Y	NA	NA	NA	NA	NA	NA	PRELID1P3	105924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	65125268	65125651	65125502	Y	NA	NA	NA	NA	NA	NA	PRELID1P3	59406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	65149197	65149230	65149214	Y	NA	PRELID1P3	NA	NA	NA	NA	PRELID1P3	35827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	65196810	65197156	65196994	Y	NA	PRELID1P3,JMJD1C	NA	NA	NA	NA	PRELID1P3	11753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	65226977	65227255	65227116	Y	NA	PRELID1P3,JMJD1C	NA	NA	NA	NA	JMJD1C	3255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	65231848	65231938	65231929	Y	NA	PRELID1P3,JMJD1C,REEP3	NA	NA	NA	NA	JMJD1C	8126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	65269177	65269730	65269542	Y	NA	JMJD1C,REEP3	REEP3,JMJD1C,LOC84989	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	REEP3	9393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	65282188	65282459	65282345	Y	JMJD1C,JMJD1C	REEP3	NA	NA	NA	NA	REEP3	3065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	65389747	65390882	65390384	Y	NA	NA	NA	NA	NA	NA	REEP3	110624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	65930110	65930546	65930307	Y	NA	NA	NA	NA	NA	NA	RP11-170M17.2	269105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr10	69523880	69524330	69524240	Y	NA	NA	NA	NA	NA	NA	DNAJC12	71594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	69579652	69579872	69579788	Y	DNAJC12	DNAJC12	NA	NA	NA	NA	DNAJC12	16052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	69609160	69609390	69609211	Y	NA	DNAJC12,SIRT1	SIRT1	K562	ChIA-PET	22265404	DNAJC12	13236	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19384198191344
chr10	69658139	69658146	69658142	Y	HNRNPH3,SIRT1,SIRT1	SIRT1	HERC4	IMR90	Hi-C	24141950	SIRT1	15712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	69778500	69778679	69778642	Y	NA	NA	NA	NA	NA	NA	HERC4	54426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	70088080	70088572	70088236	Y	SIRT1,PBLD,HNRNPH3	HNRNPH3,PBLD	NA	NA	NA	NA	HNRNPH3	359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	70735854	70735920	70735884	Y	CCAR1,SUPV3L1,DDX50,DDX21	DDX21,KIAA1279	KIAA1279	IMR90	Hi-C	24141950	KIAA1279	10567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	70815943	70816217	70816018	Y	DDX21,SRGN	NA	KIAA1279,SRGN,DDX21,VPS26A,SUPV3L1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	VPS26A	65051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	70816608	70816807	70816704	Y	SRGN	NA	KIAA1279,SRGN,DDX21,VPS26A,SUPV3L1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	VPS26A	64461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	70817174	70817630	70817194	Y	NA	NA	KIAA1279,SRGN,DDX21,VPS26A,SUPV3L1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	VPS26A	63638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	70821151	70821852	70821361	Y	DDX21,VPS26A,SRGN	NA	KIAA1279,DDX21,SRGN,VPS26A,SUPV3L1	IMR90	Hi-C	24141950	VPS26A	59416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	70825489	70826129	70825820	Y	HK1,VPS26A,SRGN	NA	KIAA1279,DDX21,SRGN,VPS26A	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	VPS26A	55139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	70846057	70846170	70846083	Y	NA	VPS26A	NA	NA	NA	NA	VPS26A	35098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	70884620	70884824	70884718	Y	DDX21,SUPV3L1,SRGN	VPS26A	NA	NA	NA	NA	VPS26A	3352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	70976966	70977432	70977124	Y	DDX21,SRGN,VPS26A	SUPV3L1,HKDC1	NA	NA	NA	NA	HKDC1	627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	71002181	71002454	71002318	Y	NA	HKDC1,HK1	NA	NA	NA	NA	HKDC1	24122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	71109104	71109433	71109270	Y	NA	NA	NA	NA	NA	NA	HK1	81364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	71198445	71198595	71198514	Y	NA	TSPAN15	HKDC1,TSPAN15,C10orf35,HK1,TACR2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSPAN15	10634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	71283312	71283690	71283502	Y	NA	NA	NA	NA	NA	NA	TSPAN15	74083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	71355649	71355822	71355737	Y	NA	C10orf35	HK1,TSPAN15,NEUROG3,COL13A1,HKDC1	IMR90	Hi-C	24141950	C10orf35	32185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr10	71840822	71841222	71841056	Y	NA	H2AFY2,AIFM2	NA	NA	NA	NA	H2AFY2	30270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	71984000	71984297	71984282	Y	NA	PPA1	NA	NA	NA	NA	PPA1	7370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	72082681	72083053	72082867	Y	NA	NA	NA	NA	NA	NA	LRRC20	57329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr10	72124245	72124646	72124446	Y	NA	LRRC20,EIF4EBP2	NA	NA	NA	NA	LRRC20	15736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	72165059	72165574	72165379	Y	NA	LRRC20,EIF4EBP2	NA	NA	NA	NA	EIF4EBP2	2924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	72416244	72416577	72416419	Y	ADAMTS14	ADAMTS14	ADAMTS14,PRF1,KIAA1274,C10orf27,SGPL1,PCBD1	IMR90	Hi-C	24141950	ADAMTS14	13982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	72609400	72609769	72609596	Y	NA	SGPL1,PCBD1	NA	NA	NA	NA	SGPL1	35683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.610891480459672
chr10	73026177	73026397	73026262	Y	UNC5B	NA	NA	NA	NA	NA	SLC29A3	50618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	73103146	73103452	73103170	Y	NA	SLC29A3	NA	NA	NA	NA	SLC29A3	26131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	73124315	73124355	73124335	Y	NA	SLC29A3	NA	NA	NA	NA	SLC29A3	47300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	73398011	73398245	73398040	Y	NA	NA	NA	NA	NA	NA	C10orf54	133010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.378173050767642
chr10	73398541	73398855	73398667	Y	NA	NA	NA	NA	NA	NA	C10orf54	132400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr10	73620184	73620641	73620392	Y	DNAJB12,DDIT4,C10orf54,PSAP	PSAP	PSAP,C10orf54,CDH23,CHST3	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PSAP	11058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr10	73722643	73722971	73722767	Y	NA	CHST3	NA	NA	NA	NA	CHST3	520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr10	73725868	73726411	73726297	Y	C10orf105,CHST3	CHST3	NA	NA	NA	NA	CHST3	3745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	73744363	73744592	73744410	Y	NA	CHST3	NA	NA	NA	NA	CHST3	22240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	73746692	73746892	73746791	Y	C10orf105,CHST3	CHST3	NA	NA	NA	NA	CHST3	24569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr10	73790594	73790943	73790840	Y	NA	NA	NA	NA	NA	NA	SPOCK2	55847	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.38761416471564
chr10	73816879	73817073	73816976	Y	NA	SPOCK2	NA	NA	NA	NA	SPOCK2	29717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr10	73946489	73946835	73946688	Y	NA	RP11-570G20.1,ANAPC16,ASCC1	NA	NA	NA	NA	RP11-570G20.1	864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	73986513	73986881	73986533	Y	C10orf105,C10orf54,CDH23,CDH23	RP11-570G20.1,ANAPC16,ASCC1,DDIT4	NA	NA	NA	NA	ASCC1	11621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	74007983	74008154	74008117	Y	NA	ANAPC16,ASCC1,DDIT4	NA	NA	NA	NA	DDIT4	23524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	74014911	74015029	74015003	Y	NA	ANAPC16,ASCC1,DDIT4	NA	NA	NA	NA	DDIT4	16649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	74020239	74021717	74020385	Y	C10orf54,PSAP,DNAJB12,DDIT4	ANAPC16,ASCC1,DDIT4	DNAJB12	K562	ChIA-PET	22265404	DDIT4	9961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr10	74032298	74032943	74032475	Y	NA	DDIT4	NA	NA	NA	NA	DDIT4	620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr10	74068319	74068595	74068530	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ASCC1,ANAPC16	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	DDIT4	36641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	74076833	74077036	74076912	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	35952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	74078612	74078870	74078849	Y	PSAP,DDIT4,CBARA1,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	34118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	74079380	74080359	74079580	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	32629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.403646100795792
chr10	74080430	74080993	74080646	Y	PSAP,DDIT4,DNAJB12	DDIT4,DNAJB12	DDIT4,ANAPC16	IMR90	Hi-C	24141950	DNAJB12	31995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.436844156461123
chr10	74085147	74085316	74085305	Y	NA	DNAJB12	NA	NA	NA	NA	DNAJB12	27672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	74091361	74091474	74091418	Y	SPOCK2,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	21514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	74091661	74092150	74091920	Y	PSAP,DDIT4,DNAJB12	DNAJB12	NA	NA	NA	NA	DNAJB12	20838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.644421064552514
chr10	74174604	74174793	74174677	Y	NA	NA	NA	NA	NA	NA	DNAJB12	61616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	74289425	74289733	74289722	Y	NA	NA	NA	NA	NA	NA	MICU1	94166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	74385233	74385288	74385261	Y	NA	MICU1,HMGN2P34	NA	NA	NA	NA	MICU1	1334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	74453097	74453245	74453141	Y	CCDC109A	MCU	NA	NA	NA	NA	MCU	3208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	74544491	74544662	74544597	Y	NA	NA	NA	NA	NA	NA	MCU	94602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	74850921	74850988	74850953	Y	ANXA7,ECD	P4HA1,NUDT13	NA	NA	NA	NA	P4HA1	3744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	74925047	74925060	74925055	Y	ANXA7,ECD	FAM149B1,ECD	NA	NA	NA	NA	FAM149B1	864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	74990824	74990933	74990931	Y	NA	DNAJC9,MRPS16,RP11-152N13.5	NA	NA	NA	NA	DNAJC9	15687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	75004761	75005017	75004932	Y	NA	DNAJC9,MRPS16,RP11-152N13.5	NA	NA	NA	NA	DNAJC9	1603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	75179357	75179732	75179545	Y	ZMYND17	ANXA7,RP11-345K20.2	NA	NA	NA	NA	RP11-345K20.2	722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	75221740	75221926	75221833	Y	NA	ANXA7,RP11-345K20.2,RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	31357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	75240023	75240096	75240089	Y	NA	RP11-137L10.6,PPP3CB	NA	NA	NA	NA	RP11-137L10.6	13187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	75361338	75361489	75361457	Y	NA	USP54	USP54,PPP3CB,BMS1P4,SEC24C,SYNPO2L,MYOZ1,CHCHD1,TTC18,C10orf103	IMR90	Hi-C	24141950	USP54	22222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	75386298	75386455	75386385	Y	NA	USP54	NA	NA	NA	NA	USP54	2587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	75666465	75666800	75666554	Y	ANXA7,NDST2	CAMK2G,PLAU	NA	NA	NA	NA	PLAU	135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	75725888	75726135	75726026	Y	NA	VCL	CAMK2G,AP3M1,VCL,NDST2,C10orf55,PLAU,ADK	IMR90	Hi-C	24141950	VCL	29737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	75931649	75931916	75931783	Y	NA	AP3M1,ADK	NA	NA	NA	NA	ADK	22689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	76682814	76683108	76682864	Y	NA	NA	NA	NA	NA	NA	KAT6B	99474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	76997919	76998322	76998050	Y	NA	VDAC2,COMTD1,HMGA1P5	NA	NA	NA	NA	COMTD1	4131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	77155063	77155414	77155221	Y	NA	ZNF503	NA	NA	NA	NA	ZNF503	4250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	77155629	77155954	77155896	Y	ZNF503	ZNF503	NA	NA	NA	NA	ZNF503	3710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	77164585	77164731	77164659	Y	ZNF503	ZNF503	NA	NA	NA	NA	ZNF503	4921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.887001923646368
chr10	77165098	77165501	77165301	Y	C10orf11	ZNF503	NA	NA	NA	NA	ZNF503	5434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr10	77189888	77190112	77189953	Y	NA	ZNF503	NA	NA	NA	NA	ZNF503	30224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	77300831	77301201	77300915	Y	NA	NA	KCNMA1,C10orf11	IMR90	Hi-C	24141950	C10orf11	57797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	77418041	77418318	77418185	Y	C10orf11	NA	C10orf11	IMR90	Hi-C	24141950	C10orf11	59043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	77533067	77533251	77533127	Y	NA	NA	NA	NA	NA	NA	C10orf11	174069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	77533288	77533636	77533475	Y	NA	NA	NA	NA	NA	NA	C10orf11	174290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr10	77548245	77548262	77548254	Y	NA	NA	NA	NA	NA	NA	C10orf11	189247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr10	77664306	77664573	77664408	Y	NA	NA	NA	NA	NA	NA	C10orf11	305308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	77793352	77793789	77793572	Y	C10orf11	NA	NA	NA	NA	NA	C10orf11	434354	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.33321688333704
chr10	78190160	78190348	78190225	Y	NA	NA	NA	NA	NA	NA	C10orf11	831162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	78271231	78271613	78271422	Y	NA	NA	NA	NA	NA	NA	C10orf11	912233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	79470426	79470747	79470598	Y	NA	NA	KCNMA1	IMR90	Hi-C	24141950	DLG5	213631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	79561522	79561805	79561686	Y	NA	NA	NA	NA	NA	NA	DLG5	122573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	79633336	79633510	79633397	Y	NA	NA	NA	NA	NA	NA	DLG5	50868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	79636555	79636603	79636579	Y	NA	DLG5	NA	NA	NA	NA	DLG5	47775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	79685177	79685609	79685373	Y	NA	DLG5	NA	NA	NA	NA	DLG5	799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.809097585321514
chr10	79731077	79731252	79731165	Y	NA	DLG5	NA	NA	NA	NA	DLG5	46699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	80023350	80023581	80023481	Y	NA	NA	NA	NA	NA	NA	RPS24	231832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	80062995	80063366	80063293	Y	NA	NA	ZMIZ1,RPS24,LOC283050,LOC100132987,POLR3A	IMR90	Hi-C	24141950	RPS24	271477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	80303504	80303921	80303741	Y	NA	NA	RPS24,LOC283050,POLR3A,ZMIZ1	IMR90	Hi-C	24141950	RPS24	511986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	80732492	80734123	80733460	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	92669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.913297616667102
chr10	80734291	80734943	80734463	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	91849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	80737664	80737999	80737882	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	88793	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.82643513558944
chr10	80806888	80807057	80806949	Y	NA	ZMIZ1	NA	NA	NA	NA	ZMIZ1	19735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	80830818	80831199	80831077	Y	ZMIZ1	ZMIZ1	NA	NA	NA	NA	ZMIZ1	4026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr10	80897644	80897901	80897807	Y	NA	NA	NA	NA	NA	NA	ZMIZ1	70852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	80911539	80911799	80911619	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	ZMIZ1	84747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	80917330	80917751	80917473	Y	NA	NA	NA	NA	NA	NA	ZMIZ1	90538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr10	80925867	80926207	80926136	Y	NA	NA	NA	NA	NA	NA	ZMIZ1	99075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	80983096	80983503	80983267	Y	NA	NA	NA	NA	NA	NA	PPIF	121722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	80990068	80990387	80990161	Y	NA	NA	NA	NA	NA	NA	PPIF	114838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	81010188	81010619	81010281	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	PPIF	94606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	81048115	81048599	81048253	Y	ZMIZ1,PPIF	NA	NA	NA	NA	NA	PPIF	56626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	81138677	81139093	81139046	Y	NA	PPIF	NA	NA	NA	NA	PPIF	33452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	81956011	81956585	81956252	Y	ANXA11	ANXA11,EIF5AP4	NA	NA	NA	NA	ANXA11	6743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	81962798	81963579	81963388	Y	SH2D4B,ANXA11	EIF5AP4	NA	NA	NA	NA	ANXA11	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	82176099	82176325	82176238	Y	C10orf58	FAM213A,TSPAN14	NA	NA	NA	NA	FAM213A	10514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	82214819	82214901	82214871	Y	TSPAN14	FAM213A,TSPAN14	NA	NA	NA	NA	TSPAN14	2897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr10	82215085	82215437	82215324	Y	TSPAN14,SH2D4B	FAM213A,TSPAN14	NA	NA	NA	NA	TSPAN14	3163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	82224459	82224735	82224582	Y	NA	TSPAN14	NA	NA	NA	NA	TSPAN14	12537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.408411551282948
chr10	82237584	82237869	82237663	Y	TSPAN14	TSPAN14	NA	NA	NA	NA	TSPAN14	25662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr10	82246029	82246351	82246262	Y	TSPAN14	TSPAN14	NA	NA	NA	NA	TSPAN14	34107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	82251425	82251820	82251559	Y	TSPAN14	TSPAN14	NA	NA	NA	NA	TSPAN14	39503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr10	82253401	82253904	82253623	Y	NA	TSPAN14	NA	NA	NA	NA	TSPAN14	41479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	82257950	82258092	82258025	Y	NA	TSPAN14	NA	NA	NA	NA	TSPAN14	46028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	82258642	82258780	82258737	Y	TSPAN14	TSPAN14	NA	NA	NA	NA	TSPAN14	46720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.530359115412304
chr10	82259709	82259999	82259959	Y	NA	TSPAN14	NA	NA	NA	NA	TSPAN14	47787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr10	84418756	84419073	84418915	Y	NA	NA	NA	NA	NA	NA	HMGN2P8	1420112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	86104605	86104727	86104619	Y	NA	NA	NA	NA	NA	NA	RGR	101796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	86152070	86152317	86152175	Y	NA	NA	NA	NA	NA	NA	RGR	149261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	88160011	88160294	88160175	Y	NA	NA	WAPAL	MCF7	ChIA-PET	22265404	WAPAL	119278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.256385584383049
chr10	88160347	88160841	88160714	Y	OPN4,GRID1	NA	WAPAL	MCF7	ChIA-PET	22265404	WAPAL	118731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr10	88470805	88471213	88471023	Y	NA	BMPR1A	NA	NA	NA	NA	BMPR1A	43194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.297149059548
chr10	88517208	88517667	88517486	Y	GLUD1,BMPR1A	BMPR1A	NA	NA	NA	NA	BMPR1A	2801	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19680153706347
chr10	88571811	88572082	88571947	Y	NA	NA	NA	NA	NA	NA	BMPR1A	57404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	88713984	88714363	88714198	Y	SNCG	SNCG	NA	NA	NA	NA	SNCG	2012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	88866849	88867228	88867039	Y	NA	FAM35A,GLUD1	NA	NA	NA	NA	GLUD1	14226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	89519838	89520126	89519981	Y	NA	NA	NA	NA	NA	NA	CFL1P1	55559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr10	89602886	89603081	89603056	Y	NA	CFL1P1,ATAD1,PTEN	NA	NA	NA	NA	ATAD1	3786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr10	91010610	91010883	91010698	Y	NA	RP11-149I23.3,IFIT2	NA	NA	NA	NA	RP11-149I23.3	30639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	91173615	91173677	91173627	Y	NA	IFIT1,LIPA,IFIT5	NA	NA	NA	NA	IFIT5	1272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	92690903	92691268	92691118	Y	NA	ANKRD1	ANKRD1,PCGF5	IMR90	Hi-C	24141950	ANKRD1	11870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr10	92921990	92922253	92922075	Y	HECTD2	NA	ANKRD1,PCGF5,RPP30,NUDT9P1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PCGF5	55655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.370939159695534
chr10	92923893	92924265	92924064	Y	NA	NA	RPP30,NUDT9P1,PCGF5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PCGF5	53643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr10	92974122	92974225	92974155	Y	NA	PCGF5	NA	NA	NA	NA	PCGF5	3683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	93254153	93254526	93254340	Y	NA	NA	NA	NA	NA	NA	HECTD2	86057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	93367671	93367850	93367762	Y	PPP1R3C	PPP1R3C	NA	NA	NA	NA	PPP1R3C	22961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	93647022	93647304	93647153	Y	FGFBP3	FGFBP3,BTAF1	NA	NA	NA	NA	FGFBP3	19936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.161065241701938
chr10	93697836	93698042	93697939	Y	NA	FGFBP3,BTAF1	NA	NA	NA	NA	BTAF1	16310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	94351391	94351691	94351485	Y	CPEB3	IDE,KIF11	NA	NA	NA	NA	KIF11	348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.681561927712418
chr10	94367821	94367909	94367865	Y	CYP26C1,KIF11	IDE,KIF11	NA	NA	NA	NA	KIF11	16778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	94516915	94517155	94517045	Y	HHEX,EXOC6	NA	EXOC6,KIF11,HHEX	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HHEX	70970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr10	95196959	95197603	95197264	Y	NA	MYOF	NA	NA	NA	NA	MYOF	42471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	95205346	95205630	95205524	Y	NA	MYOF,CEP55	NA	NA	NA	NA	MYOF	34444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr10	95218561	95218998	95218660	Y	MYOF	MYOF,CEP55	NA	NA	NA	NA	MYOF	21076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	97026412	97026787	97026670	Y	NA	PDLIM1	NA	NA	NA	NA	PDLIM1	21994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	97038434	97038774	97038645	Y	NA	PDLIM1	NA	NA	NA	NA	PDLIM1	10007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	97048077	97048324	97048201	Y	SORBS1	PDLIM1	NA	NA	NA	NA	PDLIM1	457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	97086948	97086989	97086969	Y	NA	PDLIM1	PDLIM1	IMR90	Hi-C	24141950	PDLIM1	38167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	97089881	97090244	97090218	Y	CYP2C9,CYP2C8,SORBS1,SORBS1	PDLIM1	PDLIM1	IMR90	Hi-C	24141950	PDLIM1	41100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	97148349	97148600	97148588	Y	NA	NA	PDLIM1	IMR90	Hi-C	24141950	PDLIM1	99568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	97218383	97218641	97218563	Y	NA	NA	NA	NA	NA	NA	SORBS1	100530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	97239155	97239567	97239500	Y	SORBS1,SORBS1	NA	NA	NA	NA	NA	SORBS1	79604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	97239836	97240237	97240046	Y	SORBS1	NA	NA	NA	NA	NA	SORBS1	78934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	97268464	97268675	97268582	Y	SORBS1,SORBS1	NA	NA	NA	NA	NA	SORBS1	50496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	97311589	97311866	97311827	Y	NA	SORBS1	NA	NA	NA	NA	SORBS1	7305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	97640254	97640658	97640438	Y	ENTPD1,ENTPD1	NA	NA	NA	NA	NA	RP11-248J23.5	117342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	97809134	97809259	97809196	Y	NA	CCNJ,ENTPD1-AS1	NA	NA	NA	NA	CCNJ	7983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr10	97809290	97809583	97809571	Y	NA	CCNJ,ENTPD1-AS1	NA	NA	NA	NA	CCNJ	8139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	98308552	98308827	98308687	Y	LCOR,C10orf12,ZNF518A,PIK3AP1,TM9SF3	TLL2,NPM1P26,TM9SF3	NA	NA	NA	NA	NPM1P26	9115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	98396181	98396533	98396373	Y	NA	NA	NA	NA	NA	NA	TM9SF3	50972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	98432353	98432529	98432425	Y	LCOR,PIK3AP1	PIK3AP1	NA	NA	NA	NA	PIK3AP1	45742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	98433072	98433822	98433312	Y	LCOR,PIK3AP1,TM9SF3	PIK3AP1	NA	NA	NA	NA	PIK3AP1	44449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.522633598167922
chr10	98436417	98436554	98436424	Y	NA	PIK3AP1	NA	NA	NA	NA	PIK3AP1	41717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194263297367269
chr10	98468328	98468564	98468493	Y	LCOR,C10orf12,TM9SF3,PIK3AP1	PIK3AP1,RPL13AP5	NA	NA	NA	NA	PIK3AP1	9707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	98638142	98638499	98638253	Y	NA	LCOR	NA	NA	NA	NA	LCOR	48125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	99167112	99167183	99167148	Y	NA	RRP12,PGAM1,EXOSC1,ZDHHC16	EXOSC1,ZDHHC16,PGAM1,RRP12	MCF7,K562	ChIA-PET	22265404	RRP12	7985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	99173709	99174019	99173866	Y	FRAT1,ZFYVE27,RRP12	RRP12,PGAM1,EXOSC1,ZDHHC16	PGAM1,RRP12,ZDHHC16,EXOSC1	MCF7,K562	ChIA-PET	22265404	PGAM1	9898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr10	99302907	99303185	99303057	Y	RRP12,PI4K2A	MMS19,UBTD1,HOGA1,PI4K2A	HOGA1,ANKRD2	IMR90	Hi-C	24141950	HOGA1	38895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	99305221	99305494	99305441	Y	SFRP5	MMS19,UBTD1,HOGA1,PI4K2A	HOGA1,ANKRD2	IMR90	Hi-C	24141950	HOGA1	36586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	99497485	99497673	99497579	Y	NA	ZFYVE27,SFRP5	NA	NA	NA	NA	ZFYVE27	2607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	100020230	100020246	100020237	Y	NA	LOXL4	NA	NA	NA	NA	LOXL4	5761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	101381465	101381554	101381515	Y	NA	SLC25A28,ENTPD7	NA	NA	NA	NA	SLC25A28	3099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	101417166	101417530	101417347	Y	NA	SLC25A28,CUTC	NA	NA	NA	NA	ENTPD7	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	101425049	101425416	101425233	Y	NA	SLC25A28,ENTPD7,CUTC	NA	NA	NA	NA	ENTPD7	7786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr10	101475394	101475766	101475528	Y	NA	CUTC,COX15	NA	NA	NA	NA	COX15	14091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	101537826	101537964	101537919	Y	ABCC2	COX15,ABCC2	NA	NA	NA	NA	ABCC2	2525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	101539519	101539906	101539726	Y	NA	COX15,ABCC2	NA	NA	NA	NA	ABCC2	583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr10	101543856	101543953	101543936	Y	COX15,ABCC2	ABCC2	NA	NA	NA	NA	ABCC2	3367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr10	101765990	101766360	101766233	Y	NA	DNMBP	NA	NA	NA	NA	DNMBP	1316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr10	101780024	101780319	101780173	Y	CUTC,WNT8B	DNMBP	DNMBP	MCF7	ChIA-PET	22265404	DNMBP	12348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	102130336	102130669	102130535	Y	NA	SCD,AL139819.1,LINC00263	NA	NA	NA	NA	LINC00263	703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr10	102284617	102284981	102284927	Y	NA	HIF1AN,SEC31B,NDUFB8	NA	NA	NA	NA	HIF1AN	1848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	102284995	102285353	102285150	Y	NA	HIF1AN,SEC31B,NDUFB8	NA	NA	NA	NA	HIF1AN	1476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	102490692	102490976	102490862	Y	NA	NA	NA	NA	NA	NA	FAM178A	179350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	103124623	103124787	103124739	Y	FBXW4	BTRC	DPCD,POLL	IMR90	Hi-C	24141950	BTRC	12803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	103124787	103125187	103124970	Y	NA	BTRC	DPCD,POLL	IMR90	Hi-C	24141950	BTRC	12967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr10	103453403	103453880	103453587	Y	LDB1,BTRC,MGEA5	FBXW4	NA	NA	NA	NA	FBXW4	351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr10	103591495	103591519	103591507	Y	BTRC,KCNIP2,KCNIP2	MGEA5,KCNIP2	NA	NA	NA	NA	KCNIP2	10158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	103656859	103657173	103657045	Y	NA	NA	MGEA5,LOC100289509,KCNIP2	IMR90	Hi-C	24141950	KCNIP2	55182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	103807032	103807259	103807146	Y	NA	C10orf76,HPS6	NA	NA	NA	NA	C10orf76	6691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	103877464	103877788	103877718	Y	MGEA5,TMEM180,SUFU,PSD,FBXL15,C10orf76,LDB1	LDB1,PPRC1,NOLC1	NA	NA	NA	NA	LDB1	422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr10	104196250	104196338	104196269	Y	NA	NFKB2,FBXL15,PSD,CUEDC2,TMEM180	NA	NA	NA	NA	CUEDC2	5832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	104238092	104238376	104238328	Y	NA	CUEDC2,TMEM180,ACTR1A,SUFU	NA	NA	NA	NA	TMEM180	18943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	104359512	104359806	104359659	Y	ACTR1A,C10orf26	TRIM8	NA	NA	NA	NA	TRIM8	42447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.228284507632385
chr10	104387544	104387817	104387672	Y	GBF1,CUEDC2,ACTR1A	TRIM8	NA	NA	NA	NA	TRIM8	14436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr10	104401686	104402330	104401988	Y	NA	NA	NA	NA	NA	NA	TRIM8	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03294817089425
chr10	104473144	104473537	104473339	Y	NA	ARL3,SFXN2	NA	NA	NA	NA	SFXN2	849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	104504643	104504897	104504711	Y	NA	ARL3,SFXN2	NA	NA	NA	NA	SFXN2	32348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	104683249	104683568	104683410	Y	NA	CNNM2	NA	NA	NA	NA	CNNM2	7199	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	104838794	104839158	104838851	Y	NA	NA	NA	NA	NA	NA	NT5C2	111898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	104903006	104903392	104903228	Y	C10orf32,NT5C2	NT5C2	NA	NA	NA	NA	NT5C2	47664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	104909684	104910071	104909878	Y	NA	NT5C2	NA	NA	NA	NA	NT5C2	40985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	104956992	104957240	104957082	Y	C10orf32,NT5C2	NT5C2	NA	NA	NA	NA	NT5C2	5936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	104990991	104991184	104991120	Y	NA	NT5C2,INA	SFXN2,C10orf32-AS3MT,CYP17A1,NT5C2,CNNM2,LOC729020	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NT5C2	39935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	105208274	105208534	105208404	Y	NA	NA	NA	NA	NA	NA	PDCD11	53869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	105448441	105448500	105448481	Y	NA	NA	NA	NA	NA	NA	SH3PXD2A	164801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	105519063	105519154	105519109	Y	NA	NA	NA	NA	NA	NA	SH3PXD2A	94147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	105521334	105521711	105521524	Y	SH3PXD2A	NA	NA	NA	NA	NA	SH3PXD2A	91590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr10	105530330	105530632	105530481	Y	NA	NA	NA	NA	NA	NA	SH3PXD2A	82669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	105610087	105610227	105610144	Y	NA	SH3PXD2A	NA	NA	NA	NA	SH3PXD2A	3074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	105650011	105650288	105650237	Y	GSTO2,GSTO1,MEIR5,MEIR5,COL17A1,SLK	SH3PXD2A,OBFC1	SH3PXD2A	IMR90	Hi-C	24141950	OBFC1	25675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	105667994	105668449	105668210	Y	GSTO1,GSTO1,SLK	OBFC1	NA	NA	NA	NA	OBFC1	7514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr10	105869782	105869970	105869884	Y	GSTO1,GSTO1,CCDC147,SLK,MEIR5,MEIR5	SFR1	NA	NA	NA	NA	SFR1	9846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	106094943	106095283	106095247	Y	NA	ITPRIP	NA	NA	NA	NA	ITPRIP	879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	111650301	111650520	111650491	Y	NA	XPNPEP1	NA	NA	NA	NA	XPNPEP1	30791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	111666185	111666517	111666351	Y	NA	XPNPEP1	NA	NA	NA	NA	XPNPEP1	14794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	111725333	111725444	111725334	Y	NA	XPNPEP1,ADD3	NA	NA	NA	NA	ADD3	28682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	111766410	111766784	111766651	Y	ADD3	ADD3	NA	NA	NA	NA	ADD3	12284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	111834173	111834352	111834276	Y	ADD3,SMNDC1,MXI1,MXI1	NA	NA	NA	NA	NA	ADD3	80047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	112051912	112052490	112052119	Y	ADD3,MXI1	SMNDC1	NA	NA	NA	NA	SMNDC1	10219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	112158460	112158738	112158533	Y	DUSP5	NA	SMC3,DUSP5	IMR90	Hi-C	24141950	SMNDC1	95751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr10	112159079	112159451	112159258	Y	NA	NA	SMC3,DUSP5	IMR90	Hi-C	24141950	DUSP5	96145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	112170161	112170538	112170357	Y	DUSP5	NA	DUSP5	IMR90	Hi-C	24141950	DUSP5	85058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	112668159	112668425	112668161	Y	NA	PDCD4,PDCD4-AS1,BBIP1,SHOC2,RPL13AP6	NA	NA	NA	NA	BBIP1	8607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	112670931	112671385	112671330	Y	NA	PDCD4,PDCD4-AS1,BBIP1,SHOC2,RPL13AP6	NA	NA	NA	NA	BBIP1	5647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	113990529	113990656	113990593	Y	NA	NA	NA	NA	NA	NA	ACSL5	141120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	114021080	114021581	114021336	Y	NA	NA	TECTB	IMR90	Hi-C	24141950	ACSL5	110195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.819291543150849
chr10	114025637	114025952	114025790	Y	NA	NA	NA	NA	NA	NA	ACSL5	105824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr10	114035592	114035948	114035764	Y	NA	NA	NA	NA	NA	NA	ACSL5	95828	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.72025828983117
chr10	114056117	114056571	114056187	Y	NA	NA	NA	NA	NA	NA	ACSL5	75205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr10	114094924	114095156	114095118	Y	NA	ACSL5	TECTB	IMR90	Hi-C	24141950	ACSL5	36620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	114139786	114140040	114139910	Y	VTI1A,ACSL5,ACSL5	ACSL5	NA	NA	NA	NA	ACSL5	8010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr10	114144019	114144177	114144082	Y	VTI1A,ACSL5,ACSL5	ACSL5	NA	NA	NA	NA	ACSL5	12243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	114148894	114149633	114149365	Y	VTI1A,ACSL5,ACSL5	ACSL5	NA	NA	NA	NA	ACSL5	17118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr10	114292106	114292272	114292196	Y	ZDHHC6,VTI1A	NA	NA	NA	NA	NA	VTI1A	87350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	114385835	114385842	114385839	Y	GPAM,TECTB	NA	NA	NA	NA	NA	VTI1A	181079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	114531236	114531374	114531260	Y	NA	NA	NA	NA	NA	NA	TCF7L2	176635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	114709018	114709405	114709296	Y	TCF7L2	TCF7L2	NA	NA	NA	NA	TCF7L2	1009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr10	114816164	114816362	114816263	Y	NA	NA	NA	NA	NA	NA	TCF7L2	108155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	114818562	114818849	114818630	Y	HABP2	NA	NA	NA	NA	NA	TCF7L2	110553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	114823270	114823456	114823363	Y	NA	NA	NA	NA	NA	NA	TCF7L2	115261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	114823862	114824125	114823994	Y	HABP2	NA	NA	NA	NA	NA	TCF7L2	115853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	114847181	114847492	114847280	Y	TCF7L2	NA	NA	NA	NA	NA	TCF7L2	139172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	114853789	114854299	114853993	Y	TCF7L2	NA	NA	NA	NA	NA	TCF7L2	145780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	115440649	115440877	115440799	Y	CASP7	CASP7	NA	NA	NA	NA	CASP7	3707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr10	116255200	116255589	116255576	Y	NA	NA	NA	NA	NA	NA	ABLIM1	187173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.207576908091392
chr10	116282298	116282595	116282502	Y	NA	NA	NA	NA	NA	NA	ABLIM1	160167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr10	116561110	116561522	116561275	Y	NA	FAM160B1	AFAP1L2,ABLIM1	IMR90	Hi-C	24141950	FAM160B1	17981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	116582671	116583074	116582920	Y	NA	FAM160B1	NA	NA	NA	NA	FAM160B1	3168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	116726934	116727115	116726983	Y	NA	TRUB1	NA	NA	NA	NA	TRUB1	30982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	117468082	117468283	117468150	Y	NA	NA	NA	NA	NA	NA	TRUB1	772130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	118500407	118500818	118500725	Y	NA	HSPA12A	NA	NA	NA	NA	HSPA12A	322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr10	118643126	118643297	118643273	Y	KIAA1598	ENO4,RP11-539I5.1	NA	NA	NA	NA	RP11-539I5.1	35410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	118656077	118656284	118656258	Y	NA	ENO4,RP11-539I5.1	NA	NA	NA	NA	RP11-539I5.1	48361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	118755256	118755410	118755333	Y	NA	NA	NA	NA	NA	NA	KIAA1598	128687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	118894357	118894681	118894572	Y	VAX1	KIAA1598	NA	NA	NA	NA	KIAA1598	10260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	119028396	119028853	119028412	Y	SLC18A2	NA	NA	NA	NA	NA	PDZD8	104125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	119046334	119046783	119046648	Y	NA	NA	NA	NA	NA	NA	PDZD8	86195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr10	119069713	119069747	119069730	Y	NA	NA	NA	NA	NA	NA	PDZD8	63231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	120072477	120072945	120072874	Y	NA	FAM204A	NA	NA	NA	NA	FAM204A	26895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	120591750	120591972	120591861	Y	NA	NA	C10orf46	IMR90	Hi-C	24141950	NANOS1	195256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	120692616	120692979	120692798	Y	NA	NA	NA	NA	NA	NA	NANOS1	94249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	121027859	121028318	121028196	Y	EIF3A,GRK5	NA	NA	NA	NA	NA	GRK5	62758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	121030438	121030814	121030688	Y	GRK5	NA	NA	NA	NA	NA	GRK5	65337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.800389327339786
chr10	121031141	121031480	121031339	Y	GRK5	NA	NA	NA	NA	NA	GRK5	66040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	121075171	121075335	121075278	Y	NA	NA	NA	NA	NA	NA	GRK5	110070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	121076325	121076636	121076481	Y	NA	NA	NA	NA	NA	NA	GRK5	111224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	121132785	121133131	121132963	Y	NA	NA	NA	NA	NA	NA	RGS10	167089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	121161203	121161864	121161442	Y	EIF3A	NA	NA	NA	NA	NA	RGS10	138356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	121415317	121415432	121415359	Y	GRK5,BAG3	RP11-179H18.5,BAG3	NA	NA	NA	NA	BAG3	6435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	121446860	121447228	121446967	Y	NA	BAG3	NA	NA	NA	NA	BAG3	37978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr10	121452837	121453189	121453108	Y	NA	BAG3	NA	NA	NA	NA	BAG3	43955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	121503034	121503182	121503110	Y	NA	NA	MCMBP	IMR90	Hi-C	24141950	BAG3	94152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.16500804919651
chr10	121655971	121656303	121656057	Y	NA	MCMBP,SEC23IP	NA	NA	NA	NA	SEC23IP	5748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	121682284	121682432	121682358	Y	NA	MCMBP,SEC23IP	NA	NA	NA	NA	SEC23IP	32061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	121829686	121829950	121829715	Y	NA	NA	NA	NA	NA	NA	NACAP2	74465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr10	123313040	123313152	123313149	Y	FGFR2,FGFR2,FGFR2,FGFR2	FGFR2	NA	NA	NA	NA	FGFR2	42820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	123539603	123539774	123539689	Y	TACC2,ATE1	NA	NA	NA	NA	NA	ATE1-AS1	146053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	123822805	123823045	123822957	Y	ATE1,DMBT1	NA	NA	NA	NA	NA	TACC2	76116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr10	123873239	123873409	123873290	Y	NA	NA	NA	NA	NA	NA	TACC2	126550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.68369883986986
chr10	123914446	123914761	123914722	Y	NA	NA	NA	NA	NA	NA	BTBD16	114060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	124070319	124070720	124070447	Y	NA	BTBD16	NA	NA	NA	NA	BTBD16	41498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.293857975970463
chr10	124133234	124133500	124133290	Y	NA	PLEKHA1	NA	NA	NA	NA	PLEKHA1	1022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	124196519	124196712	124196524	Y	TACC2,PLEKHA1,PLEKHA1,PLEKHA1	HTRA1	NA	NA	NA	NA	HTRA1	22329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	124524018	124524025	124524022	Y	NA	NA	NA	NA	NA	NA	FAM24B	113132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	125204221	125204417	125204319	Y	NA	NA	NA	NA	NA	NA	BUB3	292428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	125242369	125242492	125242425	Y	NA	NA	NA	NA	NA	NA	BUB3	330576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	125795335	125795932	125795563	Y	CHST15	NA	NA	NA	NA	NA	CHST15	55274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	126212520	126212862	126212532	Y	NA	RPS10P18	NA	NA	NA	NA	RPS10P18	35373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	126251501	126251899	126251725	Y	METTL10	NA	NA	NA	NA	NA	RPS10P18	74354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	126349618	126349650	126349637	Y	NA	NA	NA	NA	NA	NA	FAM53B	81188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr10	126373894	126374059	126373997	Y	ZRANB1,FAM53B	NA	NA	NA	NA	NA	FAM53B	56779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	126406559	126407126	126406852	Y	ZRANB1,FAM53B	FAM53B	NA	NA	NA	NA	FAM53B	23712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	126413244	126413567	126413371	Y	FAM53B	FAM53B	NA	NA	NA	NA	FAM53B	17271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	126429723	126430192	126430042	Y	FAM53B	FAM53B,METTL10	NA	NA	NA	NA	FAM53B	646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	126445536	126445891	126445571	Y	ZRANB1	FAM53B,METTL10,FAM175B	NA	NA	NA	NA	FAM53B	14698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	126490996	126491131	126491100	Y	NA	METTL10,FAM175B	NA	NA	NA	NA	FAM175B	2642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	127432481	127432807	127432790	Y	NA	NA	NA	NA	NA	NA	UROS	77010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	127576052	127576450	127576389	Y	NA	RNU2-42P,DHX32,FANK1	NA	NA	NA	NA	RNU2-42P	797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr10	127583558	127583978	127583747	Y	MMP21	RNU2-42P,DHX32,FANK1	NA	NA	NA	NA	FANK1	450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	128592998	128593177	128593088	Y	NA	DOCK1	NA	NA	NA	NA	DOCK1	1020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr10	129851192	129851341	129851267	Y	PTPRE	NA	NA	NA	NA	NA	MKI67	71308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	130339551	130339892	130339738	Y	NA	NA	NA	NA	NA	NA	MKI67	416902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	131436691	131436981	131436883	Y	MGMT	NA	NA	NA	NA	NA	MGMT	173243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr10	131438209	131438380	131438294	Y	NA	NA	NA	NA	NA	NA	MGMT	174761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	131644019	131644215	131644117	Y	EBF3	NA	NA	NA	NA	NA	GLRX3	288448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	133763722	133764008	133763747	Y	NA	BNIP3	NA	NA	NA	NA	BNIP3	29427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr10	133793049	133793425	133793362	Y	NA	BNIP3	PPP2R2D	IMR90	Hi-C	24141950	BNIP3	10	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	133794080	133794414	133794353	Y	NA	BNIP3	PPP2R2D	IMR90	Hi-C	24141950	BNIP3	645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr10	133879247	133879524	133879406	Y	NA	NA	BNIP3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BNIP3	85812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr10	134122010	134122092	134122081	Y	NA	STK32C,LRRC27	DPYSL4	IMR90	Hi-C	24141950	STK32C	21259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	134212658	134212854	134212750	Y	NA	PWWP2B,C10orf91	NA	NA	NA	NA	PWWP2B	3986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr10	134221496	134221692	134221620	Y	PWWP2B	PWWP2B,C10orf91	NA	NA	NA	NA	PWWP2B	12824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr10	134234707	134235257	134234764	Y	STK32C,PWWP2B	PWWP2B,C10orf91	C10orf91	IMR90	Hi-C	24141950	C10orf91	20574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr10	134260341	134260546	134260485	Y	C10orf91	C10orf91	NA	NA	NA	NA	C10orf91	4510	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.4134182315641
chr10	134266616	134267060	134266753	Y	LRRC27,LRRC27,PWWP2B,INPP5A,C10orf92	C10orf91	NA	NA	NA	NA	C10orf91	10785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr10	134330832	134331178	134331005	Y	NA	RP11-432J24.5,INPP5A	INPP5A,ADAM8,C10orf91	IMR90	Hi-C	24141950	RP11-432J24.5	1137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr10	134399818	134400353	134400054	Y	PWWP2B	NA	NA	NA	NA	NA	INPP5A	50494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	134913452	134913599	134913525	Y	NA	NA	NA	NA	NA	NA	KNDC1	58352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr10	135074691	135075148	135074934	Y	TUBGCP2,ADAM8	ZNF511,TUBGCP2	NA	NA	NA	NA	ZNF511	44831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr10	135191872	135192182	135191943	Y	NA	PRAP1,ECHS1,PAOX,MTG1	NA	NA	NA	NA	PAOX	1177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr11	269337	269903	269511	Y	TMEM80,TALDO1,SIGIRR,DEAF1,IFITM2,IFITM1,ATHL1	PSMD13,SIRT3,ATHL1,IFITM2,IFITM1	NA	NA	NA	NA	ATHL1	17232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	334344	334553	334421	Y	NA	ATHL1,IFITM2,IFITM1,IFITM3,B4GALNT4	NA	NA	NA	NA	IFITM3	8807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	353403	353830	353519	Y	CEND1,B4GALNT4	IFITM2,IFITM1,IFITM3,B4GALNT4,PKP3	SIRT3,RIC8A,SCGB1C1,ODF3,BET1L,PSMD13,NLRP6,ATHL1,IFITM1,SIGIRR,ANO9,PKP3,IFITM2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	B4GALNT4	13966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr11	355877	356724	356385	Y	NA	IFITM1,IFITM3,B4GALNT4,PKP3	IFITM1,IFITM2,RIC8A,BET1L,ATHL1,PKP3	K562,MCF7	ChIA-PET	22265404	B4GALNT4	11072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.546632281286451
chr11	364521	364678	364634	Y	NA	IFITM3,B4GALNT4,PKP3	ANO9,SIGIRR,B4GALNT4	MCF7,K562	ChIA-PET	22265404	B4GALNT4	3118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	469770	469895	469845	Y	B4GALNT4,CEND1	ANO9,PTDSS2,RNH1	NA	NA	NA	NA	PTDSS2	23502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr11	589256	589485	589371	Y	SIGIRR	RASSF7,C11orf35,MIR210HG,PHRF1,CDHR5	NA	NA	NA	NA	PHRF1	14770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	629192	629570	629436	Y	IRF7,IRF7,SCT,DRD4	CDHR5	NA	NA	NA	NA	CDHR5	5114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	655302	655449	655380	Y	SIRT3,NLRP6,CDHR5,CHID1	CDHR5,EPS8L2,TMEM80,DEAF1	NA	NA	NA	NA	CDHR5	31224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr11	926738	926879	926801	Y	BRSK2,CEND1,AP2A2	CHID1,AP2A2	NA	NA	NA	NA	AP2A2	3844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	944711	944765	944751	Y	NA	CHID1,AP2A2	NA	NA	NA	NA	AP2A2	21817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	1073369	1073545	1073512	Y	DRD4,EFCAB4A	NA	NA	NA	NA	NA	AP2A2	150475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	1147842	1148157	1148045	Y	NA	NA	MUC5B	MCF7	ChIA-PET	22265404	TOLLIP	180727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	1301851	1302228	1302044	Y	NA	TOLLIP	NA	NA	NA	NA	TOLLIP	26656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	1328544	1328761	1328705	Y	DUSP8,TOLLIP,BRSK2	TOLLIP	NA	NA	NA	NA	TOLLIP	123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	1357863	1358286	1357997	Y	TOLLIP,BRSK2	TOLLIP	TOLLIP,LOC255512	K562	ChIA-PET	22265404	TOLLIP	28979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr11	1404202	1404317	1404259	Y	IFITM10,DUSP8	BRSK2	TOLLIP,LOC255512,MUC5B,BRSK2,MOB2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BRSK2	4812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	1412454	1412793	1412702	Y	NA	BRSK2	NA	NA	NA	NA	BRSK2	3325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	1536608	1536918	1536802	Y	NA	NA	NA	NA	NA	NA	DUSP8	54232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	1675907	1676168	1675978	Y	NA	FAM99A,FAM99B	NA	NA	NA	NA	FAM99A	8659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	1712387	1712795	1712624	Y	IGF2,IGF2,KRTAP5-6	FAM99A,FAM99B	NA	NA	NA	NA	FAM99B	7528	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.672031026738106
chr11	1863948	1864140	1864052	Y	IFITM10,TNNI2	AC139143.2,SYT8,TNNI2	NA	NA	NA	NA	TNNI2	5729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	1989837	1990190	1989954	Y	IGF2,TSSC4,TH,IGF2,IGF2	MRPL23,MRPL23-AS1	NA	NA	NA	NA	MRPL23-AS1	18960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	1991146	1991394	1991373	Y	TH,IGF2,IGF2	MRPL23,MRPL23-AS1	NA	NA	NA	NA	MRPL23-AS1	17756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.248500481001105
chr11	2008416	2008795	2008568	Y	NA	MRPL23,MRPL23-AS1	NA	NA	NA	NA	MRPL23-AS1	355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.271013464272029
chr11	2009660	2010154	2009976	Y	IGF2,IGF2,SYT8	MRPL23,MRPL23-AS1	NA	NA	NA	NA	MRPL23-AS1	510	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.2198872785559
chr11	2082720	2083054	2082737	Y	NA	NA	MOB2,IGF2-AS1,IGF2,INS-IGF2,LSP1,TH,MIR4686	IMR90,K562,GM12878,HELA	Hi-C,5C	24141950,22955621	MRPL23-AS1	73570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	2200082	2200579	2200535	Y	SYT8,ASCL2,IGF2,TH	IGF2-AS,IGF2,TH	NA	NA	NA	NA	TH	8975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	2226111	2226485	2226212	Y	ASCL2	TH	NA	NA	NA	NA	TH	35004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	2234751	2234909	2234870	Y	ASCL2	TH	KCNQ1	IMR90	Hi-C	24141950	TH	43644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.939433211943073
chr11	2465201	2465287	2465244	Y	INS	TSSC4	NA	NA	NA	NA	TSSC4	45483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	2669931	2670236	2670070	Y	INS,ASCL2,TRPM5	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	48988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.412685375597831
chr11	2705021	2705206	2705044	Y	NA	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	14018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr11	2714612	2714953	2714746	Y	NA	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	4271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	2717684	2718130	2717946	Y	TSSC4,TRPM5,KCNQ1	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	1094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.85495803940113
chr11	2746958	2747301	2747029	Y	TSSC4	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	27734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.491903983087542
chr11	2754375	2754671	2754469	Y	NA	KCNQ1OT1	NA	NA	NA	NA	KCNQ1OT1	35151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.432078705973967
chr11	2834837	2835110	2834898	Y	NA	NA	NA	NA	NA	NA	SLC22A18	83841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	2933631	2934118	2933874	Y	NA	SLC22A18,PHLDA2	NA	NA	NA	NA	PHLDA2	14567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	2951529	2951649	2951619	Y	KCNQ1,PHLDA2	SLC22A18,PHLDA2	NA	NA	NA	NA	PHLDA2	2844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	2988914	2989223	2989024	Y	MRGPRG,SLC22A18	PHLDA2,NAP1L4	NA	NA	NA	NA	NAP1L4	22384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	3090855	3091125	3090991	Y	NA	RNU1-91P,CARS	NA	NA	NA	NA	CARS	14012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	3443739	3443990	3443855	Y	NA	ZNF195	NA	NA	NA	NA	ZNF195	45291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr11	3742975	3743362	3743342	Y	NA	NA	NA	NA	NA	NA	PGAP2	73592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr11	3831146	3831197	3831172	Y	NA	PGAP2,NUP98,RHOG,STIM1,AC090587.4,MIR4687	NA	NA	NA	NA	NUP98	14124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	3833340	3833454	3833393	Y	RRM1,NUP98,PGAP2,PGAP2,RHOG	PGAP2,NUP98,RHOG,STIM1,AC090587.4,MIR4687	NA	NA	NA	NA	NUP98	16318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	3859822	3860019	3859941	Y	NUP98,STIM1,RHOG	PGAP2,NUP98,RHOG,STIM1,AC090587.4,MIR4687	NA	NA	NA	NA	RHOG	194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	3880869	3881074	3880973	Y	NA	RHOG,STIM1,AC090587.4,MIR4687	NA	NA	NA	NA	MIR4687	5577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	3918054	3918451	3918253	Y	NA	STIM1,AC090587.4,MIR4687	NA	NA	NA	NA	MIR4687	42762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	4111553	4111947	4111636	Y	STIM1	RRM1	NA	NA	NA	NA	RRM1	1990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	5311058	5311280	5311161	Y	NA	NA	NA	NA	NA	NA	OR51B5	51529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	6523174	6523531	6523244	Y	OR2D2	TRIM3,ARFIP2	NA	NA	NA	NA	ARFIP2	22508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	6676048	6676412	6676073	Y	OR52W1,APBB1,APBB1,TRIM3,OR2D2,OR2D3,ZNF214,DCHS1	TAF10,TPP1,MRPL17	NA	NA	NA	NA	MRPL17	26220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	6699628	6699937	6699850	Y	OR52W1,OR10A4,OR10A2,OR6A2,OR2AG1,OR2AG2	MRPL17	NA	NA	NA	NA	MRPL17	2695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	7636630	7636941	7636786	Y	PPFIBP2,OR5P3	NA	NA	NA	NA	NA	CYB5R2	59512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	8607763	8607778	8607771	Y	ASCL3,STK33	STK33	NA	NA	NA	NA	STK33	6058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	8944739	8945112	8945060	Y	ASCL3	ST5,AKIP1,TMEM9B-AS1,TMEM9B	NA	NA	NA	NA	AKIP1	14053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	8973817	8973979	8973898	Y	NA	ST5,AKIP1,TMEM9B-AS1,TMEM9B	C11orf16	IMR90	Hi-C	24141950	TMEM9B-AS1	10243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	8988846	8989081	8988967	Y	ZNF143,DENND5A,TMEM9B,NRIP3	TMEM9B-AS1,TMEM9B	NA	NA	NA	NA	TMEM9B	4288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	9018976	9019300	9019138	Y	NA	TMEM9B-AS1,TMEM9B	NA	NA	NA	NA	TMEM9B	34418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	9310546	9310889	9310715	Y	ZNF143,NRIP3,DENND5A,TMEM41B	DENND5A,TMEM41B	NA	NA	NA	NA	TMEM41B	23438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	9385760	9386326	9386092	Y	ZNF143,SWAP70,TMEM9B,NRIP3,DENND5A,TMEM41B,IPO7	IPO7	ZNF143,IPO7,TMEM41B,DENND5A,KRT8P41,SCUBE2,LOC644656	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IPO7	17843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.691755373934552
chr11	9587499	9588027	9587720	Y	DENND5A,ZNF143,WEE1,SWAP70	WEE1	ZNF143,LOC644656	MCF7,K562	ChIA-PET	22265404	WEE1	5201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233049958119541
chr11	9588297	9588534	9588393	Y	NA	WEE1	ZNF143,LOC644656	MCF7,K562	ChIA-PET	22265404	WEE1	4694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	9590279	9590748	9590469	Y	WEE1,WEE1	WEE1	LOC644656,ZNF143	K562,MCF7	ChIA-PET	22265404	WEE1	2480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	9623030	9623285	9623166	Y	ZNF143,WEE1,WEE1	WEE1	NA	NA	NA	NA	WEE1	29802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	9635436	9636077	9635827	Y	DENND5A,ZNF143,WEE1,SWAP70	WEE1,SWAP70	WEE1,LOC644656,ZNF143,SBF2,ADM,SWAP70,LOC283104,LOC440028	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	WEE1	42208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr11	9686542	9686911	9686729	Y	ZNF143,SWAP70	SWAP70	NA	NA	NA	NA	SWAP70	2918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	9786985	9787566	9787311	Y	NA	NA	NA	NA	NA	NA	SWAP70	103361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr11	9997247	9997641	9997474	Y	AMPD3	NA	NA	NA	NA	NA	SWAP70	313623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	10135641	10135992	10135817	Y	NA	NA	LOC283104,LOC440028	IMR90	Hi-C	24141950	SBF2	177762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	10549004	10549441	10549205	Y	AMPD3,AMPD3,MRVI1,MRVI1,RNF141	MTRNR2L8,RNF141	NA	NA	NA	NA	RNF141	11336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	10619660	10619757	10619708	Y	NA	LYVE1	NA	NA	NA	NA	LYVE1	11479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	10627707	10627864	10627812	Y	NA	LYVE1	NA	NA	NA	NA	LYVE1	3372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	10681207	10681687	10681411	Y	ADM,MRVI1,MRVI1	LYVE1	LYVE1,MRVI1-AS1	IMR90	Hi-C	24141950	LYVE1	49971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	10862862	10862982	10862965	Y	NA	SNORD97,EIF4G2,ZBED5	NA	NA	NA	NA	ZBED5	15361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	10921943	10922208	10922068	Y	AMPD3,AMPD3,AMPD3,AMPD3,AMPD3,EIF4G2,ZBED5	ZBED5	NA	NA	NA	NA	ZBED5	43600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	10955517	10955651	10955533	Y	NA	NA	EIF4G2,MICALCL,CTR9,GALNTL4,LOC729013,ZBED5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZBED5	77174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	11864878	11865300	11864975	Y	NA	USP47	NA	NA	NA	NA	USP47	3908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	12197316	12197738	12197633	Y	MICAL2,MICALCL	NA	NA	NA	NA	NA	MICAL2	83773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	12204138	12204505	12204342	Y	MICAL2,MICALCL	NA	NA	NA	NA	NA	MICAL2	90595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	12697923	12698543	12698251	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	3954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	12698857	12698926	12698896	Y	PARVA,TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	4888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	12701917	12702070	12702017	Y	TEAD1	TEAD1	NA	NA	NA	NA	TEAD1	7948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	12821812	12822118	12821851	Y	NA	NA	NA	NA	NA	NA	TEAD1	127843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr11	12824175	12824668	12824395	Y	TEAD1	NA	NA	NA	NA	NA	TEAD1	130206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.32821020305589
chr11	13161981	13162352	13162107	Y	NA	NA	LOC100506305	IMR90	Hi-C	24141950	ARNTL	133847	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.49386029797795
chr11	13299973	13300299	13300022	Y	FAR1,ARNTL	ARNTL	NA	NA	NA	NA	ARNTL	3774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	13373049	13373395	13373164	Y	NA	NA	NA	NA	NA	NA	ARNTL	76850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	14306265	14306627	14306419	Y	NA	NA	NA	NA	NA	NA	RRAS2	77425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	14564922	14565133	14565013	Y	PSMA1	COPB1,PSMA1	NA	NA	NA	NA	PSMA1	25032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	14600110	14600431	14600207	Y	CYP2R1,PSMA1,PDE3B	NA	NA	NA	NA	NA	PSMA1	60220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	14874249	14874576	14874405	Y	CYP2R1	NA	NA	NA	NA	NA	PDE3B	210980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr11	14910529	14910668	14910599	Y	NA	NA	NA	NA	NA	NA	PDE3B	247260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	16392942	16393234	16393088	Y	NA	NA	NA	NA	NA	NA	C11orf58	239445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	16893238	16893541	16893423	Y	NA	NA	NA	NA	NA	NA	RP11-466H18.1	101019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	17036768	17036996	17036882	Y	PLEKHA7	RP11-466H18.1,OR7E14P,PLEKHA7	NA	NA	NA	NA	PLEKHA7	2778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr11	17099866	17100401	17100030	Y	NA	SNORD14A,RPS13	NA	NA	NA	NA	RPS13	2532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	17164162	17164523	17164517	Y	NA	NA	NA	NA	NA	NA	PIK3C2A	63007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	17230717	17231092	17230803	Y	NA	PIK3C2A,NUCB2	NA	NA	NA	NA	NUCB2	3017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr11	17374298	17375700	17374969	Y	RPS13,B7H6	KCNJ11	NA	NA	NA	NA	KCNJ11	33178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr11	18404883	18405218	18405078	Y	LDHA	LDHA,AC084117.3	NA	NA	NA	NA	LDHA	8717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	18405328	18405801	18405464	Y	HPS5,TSG101,SPTY2D1	LDHA,AC084117.3	NA	NA	NA	NA	LDHA	8134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	18426412	18426598	18426470	Y	NA	LDHA,AC084117.3	NA	NA	NA	NA	AC084117.3	1256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	18546072	18546398	18546234	Y	SPTY2D1,TSG101	RP11-613F22.5,TSG101	NA	NA	NA	NA	TSG101	381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	20016658	20016921	20016770	Y	NA	NA	NA	NA	NA	NA	PRMT3	390155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	20024358	20024601	20024461	Y	NA	NA	NA	NA	NA	NA	PRMT3	382475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.86711696709796
chr11	20041538	20041793	20041666	Y	NA	NA	NA	NA	NA	NA	PRMT3	365283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	20046945	20047208	20047086	Y	NA	NA	NA	NA	NA	NA	PRMT3	359868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	20053197	20053569	20053404	Y	NA	NA	NA	NA	NA	NA	PRMT3	353507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	22814174	22814335	22814255	Y	SVIP	RP11-17A1.3,SVIP	NA	NA	NA	NA	RP11-17A1.3	34591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	27350498	27350718	27350608	Y	BDNF	CCDC34	NA	NA	NA	NA	CCDC34	32697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	27380505	27380624	27380565	Y	NA	CCDC34	NA	NA	NA	NA	CCDC34	2791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	27419147	27419279	27419213	Y	NA	CCDC34	NA	NA	NA	NA	CCDC34	35732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr11	27451921	27452137	27452029	Y	NA	LGR4	NA	NA	NA	NA	LGR4	40185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	27481800	27481840	27481820	Y	NA	LGR4,LIN7C	NA	NA	NA	NA	LGR4	10482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.23650113944184
chr11	28063321	28063497	28063482	Y	NA	NA	NA	NA	NA	NA	METTL15	64298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr11	28128920	28129110	28128941	Y	METTL15	METTL15,KIF18A	NA	NA	NA	NA	KIF18A	1065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	28132530	28132826	28132694	Y	NA	METTL15,KIF18A	NA	NA	NA	NA	KIF18A	4675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	28857853	28858464	28857991	Y	NA	NA	BDNF-AS1,BDNF	IMR90	Hi-C	24141950	KIF18A	729998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	29302148	29302272	29302237	Y	NA	NA	BDNF	IMR90	Hi-C	24141950	KIF18A	1174293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	31450770	31450827	31450799	Y	PAX6,PAX6,IMMP1L,ELP4,DNAJC24	NA	NA	NA	NA	NA	DNAJC24	61383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	31630096	31630156	31630127	Y	PAX6	NA	NA	NA	NA	NA	ELP4	100799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	31835564	31835985	31835634	Y	NA	RCN1,PAX6	NA	NA	NA	NA	PAX6	1524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	32913428	32913828	32913453	Y	NA	QSER1	NA	NA	NA	NA	QSER1	704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr11	32915475	32916456	32915913	Y	NA	QSER1	NA	NA	NA	NA	QSER1	2751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.5755565126369
chr11	33181656	33182005	33181958	Y	NA	NA	NA	NA	NA	NA	CSTF3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr11	33723473	33723762	33723676	Y	NA	CD59	NA	NA	NA	NA	CD59	32229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	34183211	34183613	34183509	Y	NA	NA	NA	NA	NA	NA	NAT10	58062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	34187284	34187655	34187468	Y	NA	NA	NA	NA	NA	NA	NAT10	62135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	34322205	34322459	34322337	Y	NA	RP1-145M24.1	NA	NA	NA	NA	RP1-145M24.1	33091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	34386157	34386357	34386257	Y	ABTB2	RP1-145M24.1,ABTB2	NAT10,ABTB2,ELF5	IMR90	Hi-C	24141950	ABTB2	8602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	34393112	34393337	34393189	Y	ABTB2	RP1-145M24.1,ABTB2	ABTB2,ELF5,NAT10,CAT	IMR90	Hi-C	24141950	ABTB2	15557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	34621875	34622041	34621973	Y	ELF5,ELF5,EHF,EHF	EHF	APIP,EHF,CAT,PDHX,SLC1A2	IMR90	Hi-C	24141950	EHF	18599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.378173050767642
chr11	34622320	34622551	34622432	Y	ELF5,ELF5,EHF,EHF	EHF	APIP,EHF,SLC1A2,ELF5,CD44	IMR90	Hi-C	24141950	EHF	18089	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.5331385849025
chr11	34675579	34675977	34675664	Y	ABTB2,CD44	EHF	NA	NA	NA	NA	EHF	34939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.491080828487758
chr11	34676467	34676782	34676555	Y	ABTB2,ELF5,ELF5,CD44,EHF	EHF	NA	NA	NA	NA	EHF	35827	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.29721885865925
chr11	34847243	34847532	34847469	Y	ELF5,ELF5,EHF,EHF	NA	NA	NA	NA	NA	PDHX	87844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.828822444125159
chr11	34931457	34931889	34931828	Y	NA	PDHX,APIP	NA	NA	NA	NA	PDHX	3487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr11	35029453	35029465	35029458	Y	NA	NA	NA	NA	NA	NA	APIP	93407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	35293930	35294558	35294394	Y	CD44	NA	NA	NA	NA	NA	CD44	135513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	35296640	35296760	35296715	Y	NA	NA	NA	NA	NA	NA	CD44	138223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	35325239	35326726	35325689	Y	CD44	NA	NA	NA	NA	NA	CD44	166822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr11	35358493	35359078	35358891	Y	CD44	NA	NA	NA	NA	NA	CD44	200076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	35370897	35371125	35371047	Y	SLC1A2,SLC1A2	NA	NA	NA	NA	NA	CD44	212480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	35379985	35380265	35380111	Y	CD44	NA	NA	NA	NA	NA	CD44	221568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	35966511	35966551	35966528	Y	NA	LDLRAD3	NA	NA	NA	NA	LDLRAD3	2980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	36521882	36522155	36522112	Y	NA	TRAF6	NA	NA	NA	NA	TRAF6	7667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	36530791	36531124	36530883	Y	NA	TRAF6	NA	NA	NA	NA	TRAF6	969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	40869203	40869352	40869278	Y	NA	NA	NA	NA	NA	NA	RP11-124G5.1	688632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	43773446	43773547	43773497	Y	NA	NA	NA	NA	NA	NA	ALKBH3	126814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	43779324	43779404	43779364	Y	NA	NA	NA	NA	NA	NA	ALKBH3	120957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr11	44221715	44221986	44221792	Y	NA	NA	NA	NA	NA	NA	EXT2	106616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	44239965	44240168	44240067	Y	NA	NA	NA	NA	NA	NA	EXT2	124866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	45201958	45202605	45202216	Y	NA	NA	NA	NA	NA	NA	SYT13	103265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.631599080000666
chr11	45864713	45865116	45864826	Y	NA	SLC35C1,CRY2,MAPK8IP1	NA	NA	NA	NA	CRY2	1553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr11	46058881	46059222	46059206	Y	NA	NA	NA	NA	NA	NA	PHF21A	81763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	46090973	46091088	46091031	Y	NA	PHF21A	NA	NA	NA	NA	PHF21A	49897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	46135373	46135563	46135504	Y	PHF21A,AMBRA1	PHF21A	NA	NA	NA	NA	PHF21A	5422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr11	46143609	46143973	46143928	Y	NA	PHF21A	NA	NA	NA	NA	PHF21A	2624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	46264726	46265198	46265009	Y	NA	NA	DGKZ,PHF21A,CREB3L1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	DGKZ	87257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.816331476393623
chr11	46275806	46275990	46275914	Y	NA	NA	CREB3L1,PHF21A,DGKZ	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DGKZ	76465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	46619183	46619437	46619308	Y	NA	AMBRA1,ATG13,HARBI1	AMBRA1	K562	ChIA-PET	22265404	AMBRA1	5508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr11	46753121	46753488	46753304	Y	F2	ARHGAP1,ZNF408,F2	NA	NA	NA	NA	F2	14391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.329524472220747
chr11	46938695	46939005	46938850	Y	LRP4	LRP4,C11orf49	CKAP5	IMR90	Hi-C	24141950	LRP4	502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.443746519105721
chr11	47208524	47208884	47208580	Y	PACSIN3,PACSIN3,NR1H3	ARFGAP2,PACSIN3,DDB2	NA	NA	NA	NA	PACSIN3	2530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.683207213697586
chr11	47413654	47413921	47413788	Y	CELF1,CELF1,CELF1,SPI1	SLC39A13,PSMC3	SPI1,SLC39A13	K562,MCF7	ChIA-PET	22265404	SLC39A13	12762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	47573563	47574025	47573747	Y	NR1H3,SPI1,PTPRJ,CELF1,CELF1,CELF1	NDUFS3,PTPMT1,CELF1,KBTBD4,C1QTNF4	NA	NA	NA	NA	NDUFS3	10863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	47789923	47790126	47789984	Y	NA	FNBP4	NA	NA	NA	NA	FNBP4	2928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr11	47844695	47845036	47844861	Y	NA	NUP160	NA	NA	NA	NA	NUP160	23071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr11	48028604	48028990	48028813	Y	CELF1,CELF1,FNBP4,PTPRJ	PTPRJ	NA	NA	NA	NA	PTPRJ	28491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	48034964	48035405	48035033	Y	OR4X1,CELF1,CELF1,FNBP4,PTPRJ	PTPRJ	NA	NA	NA	NA	PTPRJ	34851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chr11	57104113	57104244	57104179	Y	NA	TNKS1BP1,SSRP1	NA	NA	NA	NA	SSRP1	2762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	57224938	57225034	57225001	Y	SLC43A1,SLC43A1,SERPING1,PRG3	SLC43A3,RTN4RL2	NA	NA	NA	NA	RTN4RL2	988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr11	57333685	57333973	57333758	Y	SLC43A3,SLC43A3,SLC43A3,ZDHHC5,UBE2L6	TIMM10,SERPING1	NA	NA	NA	NA	UBE2L6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	57542885	57543297	57542929	Y	NA	C11orf31,CTNND1	NA	NA	NA	NA	CTNND1	24170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	57546018	57546724	57546105	Y	MED19,C11orf31	C11orf31,CTNND1	NA	NA	NA	NA	CTNND1	27303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.568162523820028
chr11	58340867	58341571	58341167	Y	OR5B21,ZFP91,LPXN,LPXN	LPXN,ZFP91,ZFP91-CNTF,CNTF	NA	NA	NA	NA	LPXN	2122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	58942437	58942824	58942650	Y	NA	FAM111A,DTX4	NA	NA	NA	NA	DTX4	5534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	58965379	58965764	58965549	Y	PATL1,FAM111A,MPEG1	DTX4	NA	NA	NA	NA	DTX4	28476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	59323878	59323962	59323920	Y	NA	NA	NA	NA	NA	NA	OSBP	57655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	59331910	59331948	59331929	Y	OR5AN1,OR4D6,OR4D11	OSBP	NA	NA	NA	NA	OSBP	49669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	59524471	59524655	59524596	Y	MS4A6A,MS4A6A,OSBP,PATL1,STX3	STX3	NA	NA	NA	NA	STX3	45542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	59537612	59537828	59537719	Y	PATL1,STX3	MRPL16	NA	NA	NA	NA	MRPL16	38517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	60740875	60741155	60741031	Y	SDHAF2,CD5,CD6	NA	NA	NA	NA	NA	TMEM132A	50940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	60929738	60929978	60929839	Y	NA	VPS37C	NA	NA	NA	NA	VPS37C	2649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	61065380	61065516	61065448	Y	NA	VWCE,DAK,DDB1	NA	NA	NA	NA	VWCE	4484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	61074897	61075402	61075197	Y	CD6	VWCE,DAK,DDB1	NA	NA	NA	NA	VWCE	14001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr11	61266317	61266637	61266368	Y	LRRC10B	NA	NA	NA	NA	NA	SDHAF2	70803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr11	61318161	61318561	61318361	Y	NA	SYT7	NA	NA	NA	NA	SYT7	28059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	61394263	61394463	61394368	Y	NA	SYT7,RPLP0P2	NA	NA	NA	NA	RPLP0P2	13755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	61434550	61434949	61434623	Y	NA	DAGLA	NA	NA	NA	NA	DAGLA	10956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.372253428860391
chr11	61523945	61524112	61524089	Y	INCENP,DAK,C11orf9	FEN1,TMEM258,FADS2	NA	NA	NA	NA	FEN1	33997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.668579845415807
chr11	61565191	61565522	61565357	Y	NA	FEN1,TMEM258,FADS2,FADS1	NA	NA	NA	NA	FADS2	6739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	61602064	61602538	61602257	Y	INCENP,CYBASC3,CPSF7,CPSF7,FEN1	FEN1,TMEM258,FADS2,FADS1	NA	NA	NA	NA	FADS1	7274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	61627935	61628213	61628074	Y	NA	FADS1,FADS3	NA	NA	NA	NA	FADS3	29310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	61690816	61690947	61690856	Y	RAB3IL1	FADS3,RAB3IL1,FTH1	RAB3IL1,FTH1,INCENP	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RAB3IL1	5075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	61738760	61739751	61739487	Y	NA	FTH1	NA	NA	NA	NA	FTH1	5628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.563397073332872
chr11	61739990	61740514	61740301	Y	NA	FTH1	NA	NA	NA	NA	FTH1	6858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	61742606	61743000	61742909	Y	NA	FTH1	NA	NA	NA	NA	FTH1	9474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.820114186143433
chr11	61764548	61764590	61764569	Y	NA	FTH1	FADS1,BEST1,FTH1,C11orf9,FEN1,C11orf10,FADS3,RAB3IL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FTH1	31416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	61780516	61780626	61780618	Y	NA	FTH1	FADS1,BEST1,FTH1,FADS3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FTH1	47384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr11	61786548	61786990	61786612	Y	DAGLA,FTH1	NA	FADS1,BEST1,FTH1,FADS3,FADS2,RAB3IL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FTH1	53416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	61880097	61880151	61880125	Y	FADS2,FADS3,RAB3IL1	INCENP	FEN1,C11orf10,FADS3,BEST1,RAB3IL1,FADS2,DKFZP434K028,C11orf9,FADS1,FTH1,INCENP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	INCENP	9294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr11	62226637	62226898	62226739	Y	FTH1,WDR74,STX5,SLC3A2,NXF1,EML3,AHNAK	NA	NA	NA	NA	NA	SCGB1A1	56062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	62248272	62248499	62248283	Y	NA	NA	NA	NA	NA	NA	AHNAK	73208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr11	62267714	62268111	62267986	Y	NA	NA	NA	NA	NA	NA	AHNAK	53596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	62319122	62319673	62319430	Y	WDR74,UBXN1,STX5,NXF1,AHNAK,EML3	AHNAK,EEF1G,MIR3654,TUT1,MTA2	AHNAK	IMR90	Hi-C	24141950	AHNAK	2034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr11	62320979	62321244	62321106	Y	NA	AHNAK,EEF1G,MIR3654,TUT1,MTA2	NA	NA	NA	NA	AHNAK	463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr11	62321348	62321821	62321541	Y	NA	EEF1G,MIR3654,TUT1,MTA2	NA	NA	NA	NA	AHNAK	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	62413039	62413428	62413234	Y	NA	MTA2,ROM1,EML3,B3GAT3,GANAB,INTS5,METTL12,SNORA57,C11orf83,C11orf48,UBXN1	NA	NA	NA	NA	GANAB	935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	62586827	62586893	62586843	Y	NA	TMEM179B,TMEM223,NXF1,STX5,RP11-727F15.9,WDR74,SNHG1,SLC3A2	NA	NA	NA	NA	STX5	10667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	62625165	62625549	62625272	Y	TUT1,METTL12,HNRNPUL2,SLC3A2	STX5,RP11-727F15.9,WDR74,SNHG1,SLC3A2	NA	NA	NA	NA	SLC3A2	3647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr11	63010872	63011533	63011104	Y	SLC22A24,SLC22A9,SLC22A10,SLC22A25	NA	NA	NA	NA	NA	SLC22A9	123728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	63377121	63377300	63377211	Y	HRASLS5,LGALS12,LGALS12,PLA2G16,PLA2G16	PLA2G16	NA	NA	NA	NA	PLA2G16	5055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	63496405	63496421	63496415	Y	NAA40	RTN3,C11orf95	NA	NA	NA	NA	C11orf95	37692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	63685258	63686079	63685609	Y	NA	RCOR2,NAA40	NA	NA	NA	NA	RCOR2	2942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr11	63686695	63687182	63686923	Y	NA	RCOR2,NAA40	NA	NA	NA	NA	RCOR2	4379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.47300227888368
chr11	63687620	63687907	63687858	Y	LGALS12,RCOR2	RCOR2,NAA40	NA	NA	NA	NA	RCOR2	5304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.871059774592531
chr11	63705603	63705837	63705685	Y	NA	RCOR2,NAA40,COX8A,AP000721.4,OTUB1	NA	NA	NA	NA	NAA40	1172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	63712623	63712721	63712672	Y	NA	RCOR2,NAA40,COX8A,AP000721.4,OTUB1	NA	NA	NA	NA	NAA40	8192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr11	63744435	63744483	63744459	Y	KCNK4	NAA40,COX8A,AP000721.4,OTUB1	NA	NA	NA	NA	AP000721.4	4343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr11	63775286	63775368	63775342	Y	KCNK4	COX8A,AP000721.4,OTUB1,RP11-21A7A.2	NA	NA	NA	NA	OTUB1	23961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	63846659	63847077	63846694	Y	NA	RP11-21A7A.2	NA	NA	NA	NA	RP11-21A7A.2	45217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	63858567	63858836	63858756	Y	NA	NA	NA	NA	NA	NA	RP11-21A7A.2	57125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr11	63949132	63949273	63949224	Y	NA	MACROD1,STIP1,FERMT3,NUDT22,TRPT1,DNAJC4	NA	NA	NA	NA	STIP1	1471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr11	64125464	64125650	64125510	Y	MARK2,NUDT22,FKBP2,PPP1R14B,PLCB3,BAD,ESRRA,TRMT112,PRDX5,CDC42BPG,RPS6KA4	TRMT112,PRDX5,RPS6KA4	NA	NA	NA	NA	RPS6KA4	844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	64140304	64140795	64140552	Y	RCOR2,NAA40,GPR137,KCNK4,NRXN2,NRXN2,CDC42BPG	RPS6KA4	NA	NA	NA	NA	RPS6KA4	15684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	64320859	64321220	64321040	Y	C11orf85	NA	SLC22A12,NRXN2	IMR90	Hi-C	24141950	SLC22A11	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	64629180	64629438	64629292	Y	TIGD3,CDC42EP2,RASGRP2,RASGRP2,SF1,SF1,SF1,MAP4K2,FAU,EHD1,ATG2A	CDC42BPG,EHD1,MIR194-2	NA	NA	NA	NA	CDC42BPG	19139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	65059737	65059988	65059827	Y	EHD1,BATF2,FAU,SLC25A45,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,CDC42EP2	POLA2,CDC42EP2,DPF2	NA	NA	NA	NA	CDC42EP2	20301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	65069384	65069573	65069479	Y	NA	POLA2,CDC42EP2,DPF2	NA	NA	NA	NA	CDC42EP2	10716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	65185589	65187086	65186338	Y	NA	SLC25A45,FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	1159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.751580651048128
chr11	65187297	65188198	65187553	Y	BATF2,FAU,CDC42EP2,TIGD3,KCNK7,SIPA1,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	SLC25A45,FRMD8,NEAT1,AP000769.1	NEAT1	IMR90	Hi-C	24141950	NEAT1	47	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.0618718906375
chr11	65238917	65239096	65239037	Y	CDC42EP2,RELA,EHBP1L1,DKFZp761E198	AP000769.1,MALAT1	TIGD3	K562	ChIA-PET	22265404	AP000769.1	18189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	65239550	65239870	65239751	Y	BATF2,FAU,CDC42EP2,KCNK7,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1	TIGD3,SCYL1	K562	ChIA-PET	22265404	AP000769.1	18822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	65244638	65245303	65245021	Y	BATF2,FAU,CDC42EP2,SIPA1,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MALAT1	17930	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.63034544336277
chr11	65248969	65249218	65249208	Y	SNX32	AP000769.1,MALAT1,SCYL1	FRMD8,SLC25A45,TIGD3,NEAT1,MIR612,SCYL1,MALAT1	IMR90	Hi-C	24141950	MALAT1	14015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	65252951	65253044	65253026	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,FRMD8,NEAT1,MIR612	IMR90	Hi-C	24141950	MALAT1	10189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr11	65254949	65255610	65255242	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,FRMD8,NEAT1,MIR612	IMR90	Hi-C	24141950	MALAT1	7623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr11	65256318	65257363	65256982	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,FRMD8,NEAT1,MIR612,POLA2,DPF2,SLC25A45,TIGD3,SCYL1	IMR90	Hi-C	24141950	MALAT1	5870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr11	65257502	65257849	65257676	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	5384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	65259217	65259522	65259389	Y	NA	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	3711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr11	65259930	65260851	65260542	Y	BATF2,FAU,CDC42EP2,RELA,MAP3K11,KAT5,EHBP1L1,DKFZp761E198,SLC25A45,FRMD8	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	2382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	65261229	65261625	65261527	Y	CDC42EP2	AP000769.1,MALAT1,SCYL1	MALAT1,POLA2,DPF2,SLC25A45,FRMD8,TIGD3,NEAT1,MIR612,SCYL1	IMR90	Hi-C	24141950	MALAT1	1608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	65263684	65264604	65263856	Y	SNX32	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	65264635	65265953	65265057	Y	NA	AP000769.1,MALAT1,SCYL1	NA	NA	NA	NA	MALAT1	1402	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.10154233851652
chr11	65273934	65274467	65274182	Y	NA	MALAT1,SCYL1,LTBP3	LTBP3,SCYL1	IMR90	Hi-C	24141950	MALAT1	10701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	65333490	65333816	65333671	Y	SLC25A45,SIPA1,SIPA1,EIF1AD,CTSW,PCNXL3	SCYL1,LTBP3,SSSCA1,FAM89B,EHBP1L1,MAP3K11,PCNXL3	NA	NA	NA	NA	SSSCA1	2085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	65411467	65411885	65411633	Y	TIGD3,EHBP1L1,KCNK7,MAP3K11,PCNXL3,PACS1,DKFZp761E198,SIPA1,SIPA1,RELA	MAP3K11,PCNXL3,MIR4690,SIPA1,RELA	NA	NA	NA	NA	SIPA1	7899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	65419981	65420225	65420142	Y	CDC42EP2,TIGD3,SLC25A45,FRMD8,EHBP1L1,KCNK7,MAP3K11,PCNXL3,PACS1,EIF1AD,DKFZp761E198,CTSW,SIPA1,SIPA1,RELA,KAT5	MAP3K11,PCNXL3,MIR4690,SIPA1,RELA	NA	NA	NA	NA	RELA	8340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.292543706805606
chr11	65420425	65420654	65420491	Y	TIGD3,SLC25A45,MAP3K11,SNX32,PACS1,GAL3ST3,CTSW,SIPA1,SIPA1,KAT5	MAP3K11,PCNXL3,MIR4690,SIPA1,RELA	NA	NA	NA	NA	RELA	7911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391486661491764
chr11	65537213	65537543	65537499	Y	NA	NA	NA	NA	NA	NA	RNASEH2C	50795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	65666492	65667203	65666864	Y	RIN1,BRMS1,SCYL1,SSSCA1,EHBP1L1,MAP3K11,RELA,KAT5,YIF1A,RAB1B,FOSL1,DRAP1,C11orf68,DKFZp761E198,CFL1,FIBP,CCDC85B	MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1	NA	NA	NA	NA	FOSL1	448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.756506199280047
chr11	65670692	65670945	65670845	Y	RIN1,BRMS1,SCYL1,SSSCA1,PCNXL3,CFL1,MUS81,FIBP,CCDC85B,YIF1A,SF3B2,RAB1B,FOSL1,DRAP1,C11orf68,BANF1	MUS81,CFL1,EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1	NA	NA	NA	NA	FOSL1	4648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	65679250	65679576	65679373	Y	RIN1,BRMS1,SCYL1,SSSCA1,PCNXL3,RNASEH2C,CFL1,MUS81,FIBP,CCDC85B,YIF1A,RAB1B,KLC2,KLC2,KLC2,FOSL1,DRAP1,C11orf68,BANF1	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	5012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	65683105	65683625	65683322	Y	NA	EFEMP2,FIBP,CCDC85B,FOSL1,C11orf68,DRAP1,SART1	NA	NA	NA	NA	C11orf68	963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr11	65849089	65849462	65849117	Y	KCNK7,MAP3K11,PCNXL3,SIPA1,SIPA1,RELA,DKFZp761E198,CTSW,PACS1	SF3B2,PACS1	NA	NA	NA	NA	PACS1	13255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	65905081	65905308	65905252	Y	NA	NA	NA	NA	NA	NA	PACS1	69247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	65910089	65910568	65910423	Y	NA	NA	KLC2	IMR90	Hi-C	24141950	PACS1	74255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	66080826	66081241	66080906	Y	CD248	RAB1B,CNIH2,YIF1A,TMEM151A,RP11-867G23.13,CD248,RIN1,BRMS1,B3GNT1,RP11-867G23.8	NA	NA	NA	NA	CD248	1274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.436844156461123
chr11	66085302	66085580	66085502	Y	RBM14	CNIH2,YIF1A,TMEM151A,RP11-867G23.13,CD248,RIN1,BRMS1,B3GNT1,RP11-867G23.8	NA	NA	NA	NA	CD248	2787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	66094685	66094783	66094735	Y	CFL1,FIBP,DRAP1,YIF1A,CD248	YIF1A,TMEM151A,RP11-867G23.13,CD248,RIN1,BRMS1,B3GNT1,RP11-867G23.8,SLC29A2	NA	NA	NA	NA	RIN1	7528	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	66118604	66119022	66118907	Y	NA	RP11-867G23.13,CD248,RIN1,BRMS1,B3GNT1,RP11-867G23.8,SLC29A2,RNU1-84P	NA	NA	NA	NA	RP11-867G23.8	5183	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03820473594648
chr11	66487767	66487982	66487867	Y	NA	RBM4B,C11orf80	NA	NA	NA	NA	C11orf80	21940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	66494780	66495327	66494982	Y	SYT12,SYT12,PC,PC,SPTBN2	C11orf80	C11orf80	MCF7,K562	ChIA-PET	22265404	C11orf80	14595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	66717584	66717809	66717709	Y	CLCF1,ADRBK1	PC,C11orf86	NA	NA	NA	NA	PC	6038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	66738286	66738892	66738415	Y	POLD4,CLCF1,CLCF1,KDM2A,ADRBK1	PC,C11orf86	PC,SYT12,RHOD	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	C11orf86	1856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	66882341	66882514	66882428	Y	NA	KDM2A	SYT12,KDM2A,SSH3,PC,RHOD,C11orf80	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KDM2A	2226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	67037275	67037527	67037373	Y	TBC1D10C,RAD9A,PITPNM1,KDM2A,ADRBK1,ANKRD13D	ADRBK1,ANKRD13D,SSH3	NA	NA	NA	NA	ADRBK1	5394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	67121988	67122388	67122127	Y	POLD4,CLCF1	POLD4,AP003419.11,RAD9A,TBC1D10C	NA	NA	NA	NA	POLD4	55	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr11	67138852	67139479	67139267	Y	NA	POLD4,RAD9A,TBC1D10C,PPP1CA	NA	NA	NA	NA	AP003419.11	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	67139742	67140272	67140082	Y	NA	POLD4,AP003419.11,RAD9A,TBC1D10C,PPP1CA	NA	NA	NA	NA	AP003419.11	687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.34842617642461
chr11	67146992	67147327	67147282	Y	NA	POLD4,AP003419.11,RAD9A,TBC1D10C,PPP1CA,RPS6KB2	NA	NA	NA	NA	AP003419.11	7937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	67827034	67827402	67827396	Y	PPP6R3,ACY3,SUV420H1,CHKA	NDUFS8,TCIRG1	NA	NA	NA	NA	TCIRG1	22551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr11	67895703	67896078	67896017	Y	CHKA	CHKA	CHKA,SUV420H1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHKA	8792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.433392975138824
chr11	67955066	67955423	67955397	Y	TCIRG1,SUV420H1	SUV420H1	NA	NA	NA	NA	SUV420H1	23872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	68049630	68050030	68049692	Y	NA	C11orf24,LRP5	NDUFS8,TCIRG1,CHKA,SUV420H1,C11orf24,LRP5,PPP6R3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	C11orf24	12161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr11	68065646	68065898	68065824	Y	CHKA,LRP5	C11orf24,LRP5	SUV420H1,C11orf24,LRP5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LRP5	12179	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.47764776463077
chr11	68099033	68099353	68099110	Y	NA	LRP5	NA	NA	NA	NA	LRP5	20956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3794873199325
chr11	68138300	68138548	68138435	Y	UNC93B1,TCIRG1,TCIRG1	NA	NA	NA	NA	NA	LRP5	60223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	68238826	68238975	68238901	Y	TCIRG1,TCIRG1,CHKA,SUV420H1,IGHMBP2,PPP6R3	PPP6R3	NA	NA	NA	NA	PPP6R3	12640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	68273880	68274272	68274031	Y	NA	PPP6R3	NA	NA	NA	NA	PPP6R3	47694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	68608164	68608616	68608368	Y	NA	CPT1A	NA	NA	NA	NA	CPT1A	1262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	68922905	68923104	68922954	Y	NA	NA	ORAOV1,CCND1,FGF19	IMR90	Hi-C	24141950	TPCN2	108540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	68924761	68925032	68924956	Y	TPCN2	NA	ORAOV1,CCND1,MYEOV	IMR90	Hi-C	24141950	TPCN2	110396	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.30363010673877
chr11	69069179	69069344	69069260	Y	TPCN2	MYEOV	NA	NA	NA	NA	IFITM9P	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	69069522	69069665	69069598	Y	TPCN2	MYEOV,IFITM9P	NA	NA	NA	NA	IFITM9P	248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	69235389	69235576	69235517	Y	NA	NA	MYEOV,ORAOV1,CCND1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP000439.3	57132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr11	69250208	69250340	69250290	Y	NA	AP000439.3	CCND1,TPCN2,MYEOV,ORAOV1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP000439.3	42368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	69251942	69252241	69252024	Y	NA	AP000439.3	CCND1,TPCN2,MYEOV,ORAOV1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP000439.3	40467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	69295400	69295605	69295545	Y	NA	AP000439.3	CCND1,TPCN2,MYEOV	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP000439.3	2692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr11	69296310	69296479	69296388	Y	NA	AP000439.3	CCND1,TPCN2,MYEOV	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP000439.3	3602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	69451342	69451588	69451394	Y	NA	CCND1,ORAOV1	NA	NA	NA	NA	CCND1	2267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	69452524	69453230	69453220	Y	CCND1	CCND1,ORAOV1	NA	NA	NA	NA	CCND1	625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	69453520	69454472	69453912	Y	NA	ORAOV1	NA	NA	NA	NA	CCND1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.482533179857993
chr11	69517228	69517437	69517319	Y	NA	ORAOV1	NA	NA	NA	NA	ORAOV1	29044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr11	69795546	69795838	69795683	Y	ANO1	NA	ANO1,ORAOV1,FGF4,FADD	IMR90	Hi-C	24141950	FADD	251431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr11	70107513	70107580	70107548	Y	NA	PPFIA1	NA	NA	NA	NA	PPFIA1	7226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	70245269	70246141	70245676	Y	ANO1,FADD,PPFIA1,CTTN	CTTN,AP000487.5	NA	NA	NA	NA	AP000487.5	2675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	70339442	70339588	70339533	Y	NA	NA	NA	NA	NA	NA	AP000487.5	96848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	70371334	70371589	70371462	Y	NA	NA	NA	NA	NA	NA	AP000487.5	128740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	70575636	70576014	70576009	Y	NA	NA	NA	NA	NA	NA	AP000487.5	333042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	70748291	70748347	70748332	Y	NA	NA	NA	NA	NA	NA	SHANK2	213276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	71256551	71256695	71256574	Y	NA	NA	NA	NA	NA	NA	NADSYN1	94396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	71257141	71257490	71257316	Y	KRTAP5-9	NA	NA	NA	NA	NA	NADSYN1	94986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr11	71650610	71650763	71650692	Y	NA	RP11-849H4.2,RNF121	NUMA1,IL18BP	IMR90	Hi-C	24141950	RNF121	12863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr11	71658678	71659025	71658708	Y	NA	RP11-849H4.2,RNF121	NA	NA	NA	NA	RNF121	20931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr11	71702677	71703050	71702869	Y	FOLR3,IL18BP,IL18BP	NA	NA	NA	NA	NA	RNF121	64930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	71704625	71704847	71704670	Y	NA	NA	NA	NA	NA	NA	RNF121	66878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr11	71749092	71749250	71749171	Y	NA	LRTOMT,NUMA1	NA	NA	NA	NA	LRTOMT	40132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	71769812	71769929	71769891	Y	NA	LRTOMT,NUMA1,LAMTOR1	NA	NA	NA	NA	LRTOMT	19453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	71936800	71937067	71937009	Y	INPPL1	FOLR1,INPPL1	NA	NA	NA	NA	INPPL1	4055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	72003135	72003262	72003223	Y	NA	NA	NA	NA	NA	NA	INPPL1	70390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr11	72343411	72343720	72343689	Y	PDE2A	NA	NA	NA	NA	NA	ARAP1	158924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	72351414	72351690	72351438	Y	NA	NA	NA	NA	NA	NA	ARAP1	150954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	72450733	72450835	72450765	Y	P2RY2,P2RY2,ATG16L2,PDE2A,ARAP1,ARAP1	NA	NA	NA	NA	NA	ARAP1	51809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	72487947	72488068	72488008	Y	NA	ARAP1,STARD10,ATG16L2	NA	NA	NA	NA	ARAP1	14576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	72498496	72498726	72498679	Y	STARD10	ARAP1,STARD10,ATG16L2	NA	NA	NA	NA	ARAP1	3918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr11	72662392	72662530	72662447	Y	ARAP1,ARAP1,ATG16L2,RELT,RELT	NA	ATG16L2	IMR90	Hi-C	24141950	ATG16L2	139039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	72662901	72663249	72663195	Y	ATG16L2,RELT,RELT	NA	ATG16L2	IMR90	Hi-C	24141950	ATG16L2	139548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	72854261	72854849	72854638	Y	PDE2A,ARAP1,ATG16L2,RELT,RELT,FCHSD2	FCHSD2	NA	NA	NA	NA	FCHSD2	2955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.271013464272029
chr11	72953792	72954055	72953924	Y	NA	P2RY2	NA	NA	NA	NA	P2RY2	26449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	73034605	73034942	73034774	Y	NA	ARHGEF17	NA	NA	NA	NA	ARHGEF17	17271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	73036125	73036359	73036193	Y	NA	ARHGEF17,RELT	NA	NA	NA	NA	ARHGEF17	18791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.468727942961597
chr11	73088357	73088912	73088439	Y	NA	RELT	NA	NA	NA	NA	RELT	3048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr11	73221521	73221768	73221630	Y	PLEKHB1,PLEKHB1,FAM168A	NA	NA	NA	NA	NA	FAM168A	85466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	73490242	73490316	73490279	Y	NA	RAB6A,MRPL48	MRPL48,CHCHD8,PAAF1,RAB6A	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MRPL48	6045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	73490470	73490918	73490608	Y	UCP2	RAB6A,MRPL48	MRPL48,CHCHD8,PAAF1,RAB6A	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MRPL48	5443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199520374026699
chr11	73729347	73729733	73729506	Y	NA	UCP2	NA	NA	NA	NA	UCP2	36995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr11	73860209	73860535	73860372	Y	C2CD3	PPME1,C2CD3	NA	NA	NA	NA	PPME1	19609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	74171904	74172163	74171977	Y	SPCS2,RNF169,C2CD3	KCNE3,AP001372.2,LIPT2,POLD3	NA	NA	NA	NA	KCNE3	4611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	74176233	74176573	74176529	Y	KCNE3	KCNE3,AP001372.2,LIPT2,POLD3	NA	NA	NA	NA	KCNE3	201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	74257729	74258089	74257917	Y	KCNE3	NA	KCNE3,P4HA3,LIPT2,PPME1,C2CD3,CHRDL2,RNF169,POLD3,PGM2L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	POLD3	54833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	74534779	74535147	74534795	Y	XRRA1,RNF169	NA	NA	NA	NA	NA	RNF169	76866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr11	74565092	74565468	74565281	Y	NA	NA	NA	NA	NA	NA	XRRA1	92777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	74609449	74609745	74609637	Y	LOC441617,XRRA1	XRRA1,SPCS2	NA	NA	NA	NA	XRRA1	48500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr11	74667774	74667939	74667906	Y	RNF169	XRRA1,SPCS2,NEU3	NA	NA	NA	NA	SPCS2	9482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	74857404	74857707	74857556	Y	SLCO2B1	SLCO2B1	NA	NA	NA	NA	SLCO2B1	47796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	74871497	74871764	74871689	Y	OR2AT4	NA	NA	NA	NA	NA	SLCO2B1	61889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	74906257	74906584	74906454	Y	SPCS2,NEU3,ARRB1,SLCO2B1	NA	NA	NA	NA	NA	SLCO2B1	96649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	75041361	75041638	75041486	Y	ARRB1	ARRB1	NA	NA	NA	NA	ARRB1	19235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	75051761	75052000	75051847	Y	UVRAG,SPCS2,NEU3,DGAT2,ARRB1	ARRB1	NA	NA	NA	NA	ARRB1	8873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	75186595	75186756	75186708	Y	NA	GDPD5	RPS3	IMR90	Hi-C	24141950	GDPD5	48192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	75248214	75248465	75248264	Y	UVRAG	GDPD5,SERPINH1	GDPD5,RPS3,KLHL35,SERPINH1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GDPD5	13266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	75265416	75265853	75265464	Y	SERPINH1	GDPD5,SERPINH1	RPS3,GDPD5,KLHL35	IMR90	Hi-C	24141950	SERPINH1	5248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	75497543	75497797	75497673	Y	NA	DGAT2,UVRAG,RP11-535A19.2	NA	NA	NA	NA	UVRAG	26415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chr11	75537561	75537829	75537710	Y	ARRB1,DGAT2,UVRAG	UVRAG,RP11-535A19.2	NA	NA	NA	NA	RP11-535A19.2	13110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	75748582	75748924	75748753	Y	UVRAG	NA	NA	NA	NA	NA	WNT11	170856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr11	75755875	75756235	75755993	Y	UVRAG	NA	NA	NA	NA	NA	WNT11	163545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	75883349	75883640	75883491	Y	NA	WNT11	NA	NA	NA	NA	WNT11	36140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	75919893	75920246	75919996	Y	WNT11	WNT11	NA	NA	NA	NA	WNT11	113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.250797490903309
chr11	75945169	75945568	75945242	Y	NA	WNT11	C11orf30,MAP6,UVRAG,WNT11,PRKRIR,GUCY2E,DGAT2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WNT11	25389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr11	75946013	75946323	75946187	Y	NA	WNT11	C11orf30,MAP6,UVRAG,PRKRIR,WNT11,GUCY2E,DGAT2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WNT11	26233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	76480789	76480971	76480905	Y	NA	RP11-21L23.4,TSKU,RP11-21L23.3	B3GNT6,TSKU,GUCY2E,ACER3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-21L23.4	3522	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.01618337884783
chr11	76483483	76483778	76483631	Y	NA	RP11-21L23.4,TSKU,RP11-21L23.3	B3GNT6,TSKU,GUCY2E,ACER3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-21L23.4	6216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	76510532	76510646	76510589	Y	NA	RP11-21L23.4,TSKU,RP11-21L23.3	NA	NA	NA	NA	RP11-21L23.3	18426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	76721586	76721786	76721728	Y	ACER3	NA	NA	NA	NA	NA	CAPN5	54193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	77696711	77696891	77696801	Y	NA	INTS4	C11orf67,RSF1	IMR90	Hi-C	24141950	INTS4	6833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	77751153	77751354	77751183	Y	NA	INTS4,KCTD14,NDUFC2-KCTD14,NDUFC2	NA	NA	NA	NA	KCTD14	3883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280544365246341
chr11	77762280	77762565	77762352	Y	NA	KCTD14,NDUFC2-KCTD14,NDUFC2	NA	NA	NA	NA	KCTD14	7043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.553043017758775
chr11	77797839	77798046	77797943	Y	NA	KCTD14,NDUFC2-KCTD14,NDUFC2	NA	NA	NA	NA	NDUFC2	8574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.318347773654067
chr11	77898869	77899120	77899016	Y	RSF1,INTS4	USP35,KCTD21	NA	NA	NA	NA	KCTD21	1001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	77913844	77914005	77913927	Y	RSF1,INTS4	USP35,KCTD21	NA	NA	NA	NA	KCTD21	15976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	78001305	78001608	78001428	Y	GAB2,GAB2	NA	NA	NA	NA	NA	KCTD21	103437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.228284507632385
chr11	78002337	78002637	78002489	Y	NA	NA	NA	NA	NA	NA	KCTD21	104469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	79130045	79130391	79130200	Y	NA	NA	NA	NA	NA	NA	NARS2	846126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	83291402	83291636	83291613	Y	DLG2	NA	NA	NA	NA	NA	CCDC90B	295952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	85047149	85047448	85047300	Y	NA	NA	NA	NA	NA	NA	DLG2	289518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr11	85702937	85703343	85703240	Y	NA	NA	NA	NA	NA	NA	PICALM	75581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	86452946	86453377	86453076	Y	NA	PRSS23	PRSS23,ME3,CCDC81	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRSS23	46724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	86454484	86454767	86454607	Y	NA	PRSS23	PRSS23,ME3,CCDC81	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PRSS23	45334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	86664236	86664677	86664307	Y	NA	NA	NA	NA	NA	NA	FZD4,RP11-736K20.6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	86804343	86804452	86804398	Y	NA	NA	NA	NA	NA	NA	TMEM135	57457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	86841159	86841223	86841164	Y	NA	NA	NA	NA	NA	NA	TMEM135	94273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	87043104	87043447	87043253	Y	NA	NA	NA	NA	NA	NA	TMEM135	296218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	88041244	88041443	88041379	Y	NA	CTSC	NA	NA	NA	NA	CTSC	27512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	88069705	88069944	88069773	Y	CTSC	CTSC	NA	NA	NA	NA	CTSC	750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	88071526	88071793	88071707	Y	NA	CTSC	NA	NA	NA	NA	CTSC	2571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr11	89893119	89893512	89893349	Y	NAALAD2	NAALAD2	NA	NA	NA	NA	NAALAD2	30436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	89988834	89989089	89988962	Y	NA	CHORDC1,RP11-121L10.3	NA	NA	NA	NA	RP11-121L10.3	24639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	90016507	90016673	90016590	Y	NA	RP11-121L10.3	NA	NA	NA	NA	RP11-121L10.3	2779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	92504926	92505284	92505105	Y	NA	NA	NA	NA	NA	NA	SLC36A4	423846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	93863761	93864262	93864073	Y	MED17,FUT4,PANX1	PANX1	NA	NA	NA	NA	PANX1	3667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	93868403	93868611	93868483	Y	FUT4,PANX1	PANX1	NA	NA	NA	NA	PANX1	8309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	94826878	94826962	94826902	Y	NA	SRSF8,ENDOD1	NA	NA	NA	NA	ENDOD1	5904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	94882788	94883137	94883023	Y	NA	RP11-712B9.2	NA	NA	NA	NA	RP11-712B9.2	1085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	95525355	95525734	95525518	Y	NA	CEP57,FAM76B	NA	NA	NA	NA	FAM76B	3782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	95557234	95557451	95557366	Y	NA	CEP57,FAM76B	NA	NA	NA	NA	FAM76B	35661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	95610217	95610530	95610374	Y	NA	MTMR2	NA	NA	NA	NA	MTMR2	45949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	95745158	95745721	95745455	Y	FAM76B,MAML2,CCDC82	NA	NA	NA	NA	NA	MTMR2	88679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.733170573016539
chr11	95746570	95746792	95746680	Y	FAM76B	NA	NA	NA	NA	NA	MTMR2	90091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr11	95749380	95749532	95749413	Y	NA	NA	NA	NA	NA	NA	MTMR2	92901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.461825580316999
chr11	95831850	95832175	95832093	Y	MAML2	NA	NA	NA	NA	NA	MTMR2	175371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr11	95890101	95890693	95890420	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	183651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	95901866	95902123	95902033	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	172221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	95940732	95941197	95941091	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	133147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	95976157	95976737	95976478	Y	FAM76B,MAML2,JRKL,CCDC82	NA	NA	NA	NA	NA	MAML2	97607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	95982466	95982894	95982863	Y	NA	NA	NA	NA	NA	NA	MAML2	91450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	95987343	95987574	95987537	Y	FAM76B,MAML2,CCDC82	NA	NA	NA	NA	NA	MAML2	86770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	96024131	96024308	96024240	Y	NA	NA	NA	NA	NA	NA	MAML2	50036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	96040167	96040456	96040282	Y	MAML2	MAML2	NA	NA	NA	NA	MAML2	33888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	96071900	96072294	96072196	Y	MAML2,JRKL,CCDC82	MAML2,CCDC82,JRKL	NA	NA	NA	NA	MAML2	2050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	101312461	101312692	101312525	Y	NA	NA	NA	NA	NA	NA	KIAA1377	471054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	102042993	102043398	102043047	Y	C11orf70,TMEM123,YAP1,YAP1	NA	NA	NA	NA	NA	YAP1	63801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.654283493954338
chr11	102140637	102141105	102140856	Y	NA	BIRC3	YAP1,BIRC2,MMP20,BIRC3,C11orf70	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BIRC3	45110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	102216514	102216961	102216815	Y	TMEM123,BIRC3,BIRC2	BIRC3,BIRC2	NA	NA	NA	NA	BIRC2	572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr11	102283995	102284326	102284226	Y	BIRC3,BIRC2,MMP20,TMEM123	NA	BIRC2	IMR90	Hi-C	24141950	TMEM123	54789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr11	102296028	102296376	102296245	Y	NA	TMEM123	BIRC2	IMR90	Hi-C	24141950	TMEM123	42739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	102297400	102297813	102297636	Y	BIRC3,BIRC2,MMP20,TMEM123	TMEM123	BIRC2	IMR90	Hi-C	24141950	TMEM123	41302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr11	102317826	102318238	102318123	Y	BIRC3,BIRC2,TMEM123	TMEM123	NA	NA	NA	NA	TMEM123	20877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	102330262	102330405	102330334	Y	NA	TMEM123	TMEM123	K562,MCF7	ChIA-PET	22265404	TMEM123	8710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	102450928	102451243	102451066	Y	BIRC3,BIRC2,TMEM123	NA	NA	NA	NA	NA	MMP7	51444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	103321873	103321933	103321886	Y	NA	RP11-37O16.8	NA	NA	NA	NA	RP11-37O16.8	43488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	104917614	104917898	104917725	Y	NA	NA	NA	NA	NA	NA	CARD16,CASP1	52260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	107187292	107187599	107187573	Y	NA	NA	NA	NA	NA	NA	CWF19L2	138973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr11	107671635	107671653	107671644	Y	ACAT1	NA	NA	NA	NA	NA	RP11-832N8.1	105493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	107966906	107967320	107967120	Y	NA	ACAT1	ACAT1	IMR90	Hi-C	24141950	ACAT1	22923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr11	108600247	108600616	108600285	Y	NA	NA	NA	NA	NA	NA	DDX10	66495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	108679072	108679281	108679081	Y	NA	NA	NA	NA	NA	NA	DDX10	145320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	109965770	109966113	109965869	Y	RDX,FDX1,ZC3H12C	ZC3H12C	NA	NA	NA	NA	ZC3H12C	3683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	109966397	109966711	109966537	Y	NA	ZC3H12C	NA	NA	NA	NA	ZC3H12C	4310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	110220556	110220727	110220626	Y	ZC3H12C,FDX1,RDX	RP11-347E10.1	C11orf53,RDX	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-347E10.1	3128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	111191582	111191686	111191634	Y	NA	NA	NA	NA	NA	NA	LAYN	217319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr11	111205448	111205684	111205566	Y	NA	NA	NA	NA	NA	NA	LAYN	203321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr11	111560054	111560414	111560322	Y	NA	NA	PPP2R1B	IMR90	Hi-C	24141950	PPP2R1B	74737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	111692318	111692670	111692505	Y	NA	RP11-108O10.2	PPP2R1B	IMR90	Hi-C	24141950	RP11-108O10.2	45244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	111805995	111806483	111806196	Y	IL18	CRYAB	NA	NA	NA	NA	CRYAB	13549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.296326416555416
chr11	111824557	111824693	111824689	Y	NA	CRYAB	NA	NA	NA	NA	CRYAB	32111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	111853928	111854208	111854100	Y	NA	DLAT	NA	NA	NA	NA	DLAT	39330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	112028082	112028533	112028265	Y	IL18	IL18,BCO2	NA	NA	NA	NA	IL18	4307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	113637897	113638051	113637974	Y	CLDN25	ZW10	NA	NA	NA	NA	ZW10	4482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	113708252	113709087	113708915	Y	CLDN25	USP28	NA	NA	NA	NA	USP28	35205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	113828537	113828676	113828607	Y	NA	NA	NA	NA	NA	NA	USP28	84245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr11	113945404	113945849	113945581	Y	ZBTB16,ZBTB16	NA	NA	NA	NA	NA	USP28	201112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr11	113962751	113963246	113962839	Y	NA	NA	NA	NA	NA	NA	USP28	218459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	113999597	113999969	113999698	Y	NA	NA	NA	NA	NA	NA	USP28	255305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	114312879	114313299	114312892	Y	NA	RBM7,C11orf71,REXO2	NA	NA	NA	NA	REXO2	4771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	115345794	115346124	115345959	Y	NA	CADM1	NA	NA	NA	NA	CADM1	27551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	115371607	115371956	115371778	Y	NA	CADM1	NA	NA	NA	NA	CADM1	1719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.496669433574699
chr11	115372753	115373113	115372889	Y	CADM1	CADM1	NA	NA	NA	NA	CADM1	562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	115373347	115373590	115373469	Y	NA	CADM1	NA	NA	NA	NA	CADM1	85	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	115741521	115741886	115741709	Y	NA	NA	CADM1	IMR90	Hi-C	24141950	CADM1	367846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	116061103	116061309	116061204	Y	NA	NA	CADM1,FAM55B	IMR90	Hi-C	24141950	BUD13	580395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	116299046	116299325	116299186	Y	APOA5	NA	NA	NA	NA	NA	BUD13	342379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr11	116302675	116302773	116302724	Y	NA	NA	NA	NA	NA	NA	BUD13	338931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	116458442	116458607	116458525	Y	NA	NA	NA	NA	NA	NA	BUD13	183097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	116462532	116462616	116462574	Y	NA	NA	FAM55B	IMR90	Hi-C	24141950	BUD13	179088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	116679644	116679851	116679748	Y	APOC3,APOA1	BUD13,ZNF259,APOA5,APOA4,APOC3,APOA1	APOA5,ZNF259	IMR90	Hi-C	24141950	APOA4	12171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr11	116697562	116697929	116697663	Y	APOA5,APOA4,APOC3,APOA1	ZNF259,APOA5,APOA4,APOC3,APOA1	NA	NA	NA	NA	APOC3	493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.346449362011931
chr11	116790672	116791048	116790863	Y	NA	NA	APOA4,APOA1,APOC3	IMR90	Hi-C	24141950	APOA1	84006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	116867531	116867975	116867966	Y	NA	AP000936.1	NA	NA	NA	NA	AP000936.1	36792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	117015877	117016035	117015996	Y	SIK3,PAFAH1B2	SIK3,PAFAH1B2,SIDT2	NA	NA	NA	NA	PAFAH1B2	2894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	117050933	117051273	117050997	Y	SIDT2	PAFAH1B2,SIDT2,TAGLN,PCSK7	NA	NA	NA	NA	SIDT2	3484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr11	117693971	117694128	117694108	Y	IL10RA,FXYD2,FXYD2	DSCAML1,FXYD2	NA	NA	NA	NA	FXYD2	3285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	118051304	118051408	118051361	Y	DSCAML1,FXYD6,FXYD6,TMEM25,SCN4B,SCN4B,SCN2B	SCN2B	NA	NA	NA	NA	SCN2B	5916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	118065939	118066307	118065952	Y	NA	SCN2B	NA	NA	NA	NA	SCN2B	20551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.592812419248394
chr11	118109664	118110018	118109732	Y	IL10RA,AMICA1,AMICA1,UBE4A,MPZL3	MPZL3,MPZL2	NA	NA	NA	NA	MPZL3	11047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	118112268	118112532	118112411	Y	IL10RA,AMICA1,AMICA1,UBE4A,MPZL3,CD3G,CD3E,CD3D	MPZL3,MPZL2	NA	NA	NA	NA	MPZL3	8533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	118153348	118153551	118153451	Y	NA	MPZL3,MPZL2	AMICA1	IMR90	Hi-C	24141950	MPZL2	20097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	118481750	118482023	118481896	Y	PHLDB1	ARCN1,IFT46,PHLDB1	NA	NA	NA	NA	PHLDB1	6595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	118493108	118493651	118493460	Y	NA	PHLDB1	NA	NA	NA	NA	PHLDB1	17953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	118663387	118663780	118663691	Y	NA	DDX6	NA	NA	NA	NA	DDX6	3529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.362722527886078
chr11	118740767	118741727	118741016	Y	MLL,VPS11,RPS25,CXCR5,CXCR5,CCDC84,CCDC153,CBL,DDX6	MIR4492	DDX6,CXCR5,BCL9L,MIR4492	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MIR4492	37690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	118782911	118783378	118783221	Y	SLC37A4,RNF26,HYOU1,HYOU1,HMBS,DPAGT1,CCDC153,BCL9L,UPK2,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	MIR4492	3494	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.71408878315284
chr11	118783640	118784096	118783954	Y	NA	MIR4492,BCL9L	NA	NA	NA	NA	MIR4492	4223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	118787524	118788054	118787588	Y	NA	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	6263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	118788249	118788453	118788294	Y	MLL,PHLDB1,DDX6,VPS11,RPS25,CBL,C2CD2L,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	5864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	118790377	118790895	118790660	Y	NA	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	3422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239129677771555
chr11	118791529	118792348	118792152	Y	PHLDB1,BCL9L	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	1969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.422707902744417
chr11	118793665	118793922	118793750	Y	MLL,DDX6,VPS11,RPS25,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr11	118794621	118795305	118795013	Y	MLL,DDX6,VPS11,RPS25,CBL,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr11	118799839	118800231	118800031	Y	C2CD2L	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	5522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	118800245	118800827	118800413	Y	MLL,DDX6,VPS11,RPS25,CBL,C2CD2L,CXCR5,CXCR5,CCDC84	MIR4492,BCL9L	NA	NA	NA	NA	BCL9L	5928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	119239128	119239276	119239217	Y	NA	MCAM,RNF26,C1QTNF5,USP2-AS1	NA	NA	NA	NA	USP2-AS1	11212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200674545446794
chr11	119239478	119239727	119239579	Y	ABCG4,C1QTNF5,USP2	MCAM,RNF26,C1QTNF5,USP2-AS1	NA	NA	NA	NA	USP2-AS1	10761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	119241226	119241377	119241346	Y	NA	RNF26,C1QTNF5,USP2-AS1	NA	NA	NA	NA	USP2-AS1	9111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr11	119341099	119341491	119341199	Y	NA	NA	NA	NA	NA	NA	USP2-AS1	90611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	119540378	119540644	119540511	Y	NA	NA	NA	NA	NA	NA	PVRL1	57150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	119612950	119613345	119613188	Y	NA	PVRL1	PVRL1,TRIM29	IMR90	Hi-C	24141950	PVRL1	15156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	120053242	120053546	120053328	Y	NA	OAF	POU2F3,LOC649133	IMR90	Hi-C	24141950	OAF	25929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr11	120079363	120079802	120079708	Y	NA	POU2F3	NA	NA	NA	NA	OAF	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr11	120083069	120083545	120083438	Y	GRIK4,ARHGEF12,OAF	OAF,POU2F3	NA	NA	NA	NA	OAF	3594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr11	120089762	120089841	120089801	Y	NA	OAF,POU2F3	NA	NA	NA	NA	OAF	10287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr11	120302835	120303154	120303088	Y	OAF,ARHGEF12	NA	NA	NA	NA	NA	GRIK4	77314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	120463888	120464227	120463894	Y	GRIK4	NA	GRIK4	IMR90	Hi-C	24141950	GRIK4	83420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	120483837	120483981	120483920	Y	TECTA,GRIK4	NA	GRIK4	IMR90	Hi-C	24141950	GRIK4	103369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	120895811	120895984	120895886	Y	GRIK4,TBCEL,TBCEL,TECTA	TBCEL	NA	NA	NA	NA	TBCEL	3030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	121321006	121321403	121321144	Y	SORL1	SORL1	NA	NA	NA	NA	SORL1	94	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	121330249	121330515	121330350	Y	SORL1	SORL1	NA	NA	NA	NA	SORL1	9337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221873259552861
chr11	121526040	121526695	121526415	Y	NA	NA	NA	NA	NA	NA	SORL1	205128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr11	121593077	121593718	121593342	Y	NA	NA	MIR100HG,MIR125B1	IMR90	Hi-C	24141950	SORL1	272165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	121800306	121800649	121800603	Y	NA	NA	NA	NA	NA	NA	SORL1	479394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	122100461	122100655	122100524	Y	NA	NA	MIR100HG,MIR125B1	IMR90	Hi-C	24141950	RP11-820L6.1	190924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	122568426	122568832	122568574	Y	UBASH3B	UBASH3B	NA	NA	NA	NA	UBASH3B	44043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	122586167	122586342	122586202	Y	NA	NA	NA	NA	NA	NA	UBASH3B	61784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	122608190	122608588	122608260	Y	NA	NA	NA	NA	NA	NA	UBASH3B	83807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	122888881	122889273	122889127	Y	NA	RPL34P23,SNORD14D,SNORD14C,HSPA8	NA	NA	NA	NA	RPL34P23	15302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr11	123519920	123520232	123520133	Y	OR8D4,SCN3B	SCN3B	NA	NA	NA	NA	SCN3B	3720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	124514246	124514548	124514258	Y	OR8G1,OR8D1,OR8D2,OR8B4,OR8B8,OR8B12,OR8A1	TBRG1,SPA17,SIAE	NA	NA	NA	NA	TBRG1	23514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr11	124631233	124631497	124631343	Y	ROBO4,ESAM	NRGN,RP11-677M14.2,VSIG2,RP11-677M14.3,ESAM	NA	NA	NA	NA	ESAM	1047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	124638889	124639135	124639012	Y	NA	NRGN,RP11-677M14.2,VSIG2,RP11-677M14.3,ESAM	NA	NA	NA	NA	ESAM	8703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	124668888	124669222	124669022	Y	NA	VSIG2,RP11-677M14.3,ESAM	NA	NA	NA	NA	ESAM	38702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	124812430	124812599	124812544	Y	PKNOX2,HEPN1,HEPACAM	ROBO4,HEPACAM,CCDC15	ROBO4,ROBO3,HEPACAM,CCDC15,PKNOX2	IMR90	Hi-C	24141950	HEPACAM	8122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	124940571	124941111	124940841	Y	TBRG1,SLC37A2	SLC37A2,TMEM218	NA	NA	NA	NA	SLC37A2	9608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	125983623	125983738	125983673	Y	CDON	NA	HYLS1	IMR90	Hi-C	24141950	CDON	52393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	125985079	125985242	125985162	Y	CDON,ST3GAL4	NA	HYLS1	IMR90	Hi-C	24141950	CDON	53849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	125985923	125986168	125986013	Y	NA	NA	HYLS1	IMR90	Hi-C	24141950	CDON	54693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr11	126029421	126029682	126029619	Y	NA	FAM118B,RPUSD4	HYLS1,CDON	IMR90	Hi-C	24141950	FAM118B	49627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr11	126084365	126084425	126084397	Y	NA	FAM118B,RPUSD4	NA	NA	NA	NA	RPUSD4	4778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20543999593395
chr11	126337982	126338153	126338089	Y	NA	NA	NA	NA	NA	NA	ST3GAL4	114447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	126790922	126791265	126791130	Y	KIRREL3	NA	NA	NA	NA	NA	ST3GAL4	567387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	128199144	128199508	128199227	Y	NA	NA	ETS1,FLI1,LOC100507392,KCNJ1	IMR90	Hi-C	24141950	ETS1	255945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	128212720	128212961	128212844	Y	FLI1,FLI1,ETS1	NA	ETS1,KCNJ1	IMR90	Hi-C	24141950	ETS1	242492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	128291574	128291714	128291646	Y	NA	NA	ETS1,FLI1	IMR90	Hi-C	24141950	ETS1	163739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	128318387	128318699	128318622	Y	NA	NA	NA	NA	NA	NA	ETS1	136754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr11	128366966	128367159	128367092	Y	ETS1	NA	NA	NA	NA	NA	ETS1	88294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	128419505	128419554	128419521	Y	NA	ETS1	NA	NA	NA	NA	ETS1	35899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	129013172	129013631	129013445	Y	NA	NA	NA	NA	NA	NA	ARHGAP32	133588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	129102482	129102753	129102618	Y	NA	ARHGAP32	NA	NA	NA	NA	ARHGAP32	44466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	129723853	129724184	129723902	Y	NFRKB	TMEM45B,NFRKB	NA	NA	NA	NA	NFRKB	39301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	129730176	129730501	129730339	Y	TMEM45B	TMEM45B,NFRKB	NA	NA	NA	NA	NFRKB	32984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr11	129731747	129732130	129731880	Y	ST14,NFRKB,TMEM45B	TMEM45B,NFRKB	NA	NA	NA	NA	NFRKB	31355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.361899884893494
chr11	129871629	129871941	129871631	Y	NA	PRDM10,TCEB2P2	NA	NA	NA	NA	PRDM10	899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr11	129912030	129912233	129912119	Y	PRDM10,APLP2	PRDM10,TCEB2P2,APLP2	PRDM10,LINC00167,APLP2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TCEB2P2	10915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	129942098	129942391	129942179	Y	PRDM10	TCEB2P2,APLP2	NA	NA	NA	NA	APLP2	4366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	130062798	130062918	130062846	Y	NA	NA	NA	NA	NA	NA	ZBTB44	119663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr11	130113792	130113937	130113867	Y	NA	NA	NA	NA	NA	NA	ZBTB44	68644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr11	131934936	131935322	131935091	Y	NTM	NA	NA	NA	NA	NA	SNX19	1150532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	131995649	131996509	131995944	Y	NTM	NA	NA	NA	NA	NA	SNX19	1211245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr11	134124453	134124658	134124640	Y	NCAPD3,THYN1,GLB1L3,GLB1L2	VPS26B,NCAPD3,THYN1,ACAD8	NA	NA	NA	NA	ACAD8	3064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr11	134708086	134708460	134708277	Y	NA	NA	LOC283177	IMR90	Hi-C	24141950	GLB1L2	508318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr12	298364	298488	298415	Y	IQSEC3	SLC6A12	NA	NA	NA	NA	SLC6A12	23248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	398927	399098	399013	Y	NA	NA	NA	NA	NA	NA	SLC6A12	77191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	680187	680377	680237	Y	NA	RP5-1154L15.2	NA	NA	NA	NA	RP5-1154L15.2	13275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	685193	685500	685436	Y	NA	RP5-1154L15.2	NA	NA	NA	NA	RP5-1154L15.2	8152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr12	690377	690646	690594	Y	NA	RP5-1154L15.2	NA	NA	NA	NA	RP5-1154L15.2	3006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr12	726826	727017	726943	Y	CCDC77,KDM5A,WNK1	RP5-1154L15.2	NA	NA	NA	NA	RP5-1154L15.2	33174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr12	860254	860664	860544	Y	RAD52,NINJ2,WNK1	WNK1	NA	NA	NA	NA	WNK1	495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr12	1026879	1027238	1027070	Y	NA	NA	NA	NA	NA	NA	RAD52	69981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr12	1211682	1211803	1211740	Y	NA	NA	NA	NA	NA	NA	ERC1	114007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	1407863	1408257	1407945	Y	NA	NA	NA	NA	NA	NA	WNT5B	228800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	1432132	1432276	1432219	Y	NA	NA	NA	NA	NA	NA	WNT5B	204781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	1532185	1532472	1532256	Y	ERC1	NA	NA	NA	NA	NA	WNT5B	104585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	1698560	1698670	1698614	Y	FBXL14	FBXL14	NA	NA	NA	NA	FBXL14	2661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	1770869	1771337	1771069	Y	LRTM2,ADIPOR2	ADIPOR2	NA	NA	NA	NA	ADIPOR2	24403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.499297971904414
chr12	1778192	1778764	1778488	Y	NA	ADIPOR2	ADIPOR2,DCP1B	IMR90	Hi-C	24141950	ADIPOR2	16976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr12	1876861	1877254	1877034	Y	NA	RPS4XP14	NA	NA	NA	NA	RPS4XP14	11684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	1925056	1925234	1925157	Y	NA	NA	NA	NA	NA	NA	RPS4XP14	59879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.589361237926095
chr12	2026044	2026229	2026139	Y	CACNA2D4	CACNA2D4	NA	NA	NA	NA	CACNA2D4	42	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	2103073	2103532	2103387	Y	FBXL14	DCP1B,RP5-1096D14.6	NA	NA	NA	NA	DCP1B	8169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	2144277	2144357	2144308	Y	LRTM2	DCP1B,RP5-1096D14.6	CACNA1C,MIR3649,CACNA2D4,ADIPOR2,DCP1B,LOC100652846,WNT5B	IMR90	Hi-C	24141950	RP5-1096D14.6	32445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr12	2547305	2547477	2547330	Y	NA	NA	NA	NA	NA	NA	CBX3P4	353984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	3011496	3011637	3011574	Y	NRIP2	FOXM1,TULP3	NA	NA	NA	NA	TULP3	27107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	3180278	3180396	3180348	Y	NA	TSPAN9	TSPAN9	IMR90	Hi-C	24141950	TSPAN9	4125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr12	3194969	3195128	3195057	Y	NA	TSPAN9	NA	NA	NA	NA	TSPAN9	10448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341683911524774
chr12	3948349	3948613	3948479	Y	NA	PARP11	NA	NA	NA	NA	PARP11	31995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	3979182	3979441	3979276	Y	PARP11	PARP11	NA	NA	NA	NA	PARP11	1167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	4120809	4121079	4120983	Y	NA	NA	CCND2	IMR90	Hi-C	24141950	PARP11	140201	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.15358095425155
chr12	4378284	4379414	4378568	Y	PARP11,C12orf4,CCND2,C12orf5	CCND2,C12orf5	PARP11	IMR90	Hi-C	24141950	CCND2	1524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	4403384	4403473	4403428	Y	NA	CCND2,C12orf5	NA	NA	NA	NA	CCND2	22446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	5589537	5589706	5589616	Y	NA	NA	NA	NA	NA	NA	CD9	717175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	6291358	6291755	6291562	Y	VWF,CD9	CD9	VWF,PLEKHG6,CD9	IMR90	Hi-C	24141950	CD9	15126	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.35145553068588
chr12	6311406	6311775	6311432	Y	NA	CD9	NA	NA	NA	NA	CD9	4525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	6335136	6335793	6335267	Y	SCNN1A	CD9,RP1-96H9.5	NA	NA	NA	NA	CD9	28255	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.32578291869003
chr12	6339954	6340271	6340062	Y	VAMP1,TAPBPL,IFFO1	CD9,RP1-96H9.5	NA	NA	NA	NA	CD9	33073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.622890822018937
chr12	6387822	6388153	6388049	Y	NA	RP1-96H9.5,PLEKHG6	VWF,PLEKHG6,CD9,TNFRSF1A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP1-96H9.5	10231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	6389072	6389528	6389363	Y	CD9,PLEKHG6,PLEKHG6	RP1-96H9.5,PLEKHG6	VWF,PLEKHG6,CD9,TNFRSF1A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP1-96H9.5	11481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	6403662	6404056	6403860	Y	PLEKHG6,PLEKHG6,PLEKHG6	RP1-96H9.5,PLEKHG6,TNFRSF1A	VWF,PLEKHG6,TNFRSF1A,CD9,IFFO1,GAPDH,NCAPD2	IMR90	Hi-C	24141950	PLEKHG6	13546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr12	6404239	6404667	6404531	Y	NA	RP1-96H9.5,PLEKHG6,TNFRSF1A	VWF,PLEKHG6,TNFRSF1A,CD9,IFFO1,GAPDH,NCAPD2	IMR90	Hi-C	24141950	PLEKHG6	12935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.48384744902285
chr12	6444583	6445131	6444861	Y	CD4,CD4,TNFRSF1A	PLEKHG6,TNFRSF1A,LTBR,SCNN1A	NA	NA	NA	NA	TNFRSF1A	4149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.364036797050936
chr12	6445143	6445640	6445507	Y	VAMP1,TAPBPL,CHD4,CD4,CD4,TNFRSF1A	PLEKHG6,TNFRSF1A,LTBR,SCNN1A	NA	NA	NA	NA	TNFRSF1A	3640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.363214154058352
chr12	6586836	6587095	6586846	Y	PLEKHG6,PLEKHG6,TPI1,TPI1	RP1-102E24.9,CD27-AS1,TAPBPL,VAMP1,NCAPD2,MRPL51,SCARNA10	NA	NA	NA	NA	VAMP1	8683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	6616640	6616858	6616680	Y	NA	VAMP1,NCAPD2,MRPL51,SCARNA10,GAPDH,IFFO1	NA	NA	NA	NA	SCARNA10	530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	6622889	6622901	6622895	Y	NA	VAMP1,NCAPD2,MRPL51,SCARNA10,GAPDH,IFFO1	NA	NA	NA	NA	SCARNA10	5501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	6663248	6663743	6663420	Y	GPR162,ENO2,C12orf53,VAMP1,IFFO1	SCARNA10,GAPDH,IFFO1,NOP2	NA	NA	NA	NA	IFFO1	9	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	6684613	6684668	6684641	Y	NA	GAPDH,IFFO1,NOP2,CHD4	NA	NA	NA	NA	NOP2	8756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr12	6873427	6873901	6873603	Y	C12orf53,ENO2,CLSTN3,ATN1,PTMS,GPR162	COPS7A,PTMS,MLF2,LAG3,CD4	LEPREL2,CDCA3,TPI1,CD4,GPR162,SPSB2,GNB3,USP5	IMR90	Hi-C	24141950	MLF2	740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr12	6962211	6962407	6962304	Y	GAPDH,COPS7A,COPS7A,COPS7A,COPS7A,LEPREL2,USP5,USP5,TPI1,TPI1	GPR162,LEPREL2,CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2	NA	NA	NA	NA	USP5	2919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	7000184	7000641	7000294	Y	PEX5,VAMP1,ACRBP,CD4,CD4,PTPN6	CDCA3,USP5,TPI1,RPL13P5,LRRC23,SPSB2,ENO2,ATN1,C12orf57	NA	NA	NA	NA	SPSB2	3662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.433392975138824
chr12	7100414	7100432	7100423	Y	NA	RNU7-1,EMG1,SCARNA12,PHB2,C1S,LPCAT3	NA	NA	NA	NA	C1S	6063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	7592182	7592797	7592685	Y	PEX5,NANOG	RP11-157G21.2,CD163L1	NA	NA	NA	NA	RP11-157G21.2	1596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	7792912	7793287	7793081	Y	PEX5,PEX5,NANOG,DPPA3,SLC2A14,GDF3	NA	NA	NA	NA	NA	CD163L1	162419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	7987438	7987606	7987534	Y	SLC2A3,NECAP1,FOXJ2,CLEC4A	NA	NA	NA	NA	NA	SLC2A14	54138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	8013004	8013217	8013212	Y	NA	SLC2A14	NA	NA	NA	NA	SLC2A14	28527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	8058337	8058628	8058506	Y	NA	SLC2A14,SLC2A3	NA	NA	NA	NA	SLC2A14	16593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	8059074	8059227	8059161	Y	NA	SLC2A14,SLC2A3	NA	NA	NA	NA	SLC2A14	17330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	8112195	8112747	8112462	Y	NECAP1,FOXJ2,CLEC4A,SLC2A3	SLC2A3	SLC2A3	K562	ChIA-PET	22265404	SLC2A3	25324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	8179132	8179551	8179335	Y	NA	FOXJ2	PEX5,SLC2A14,SLC2A3,FOXJ2,C3AR1,NECAP1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXJ2	3748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.599554684148229
chr12	9228740	9228924	9228916	Y	NA	A2M	NA	NA	NA	NA	A2M	37901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr12	9236028	9236753	9236097	Y	KLRG1	A2M	NA	NA	NA	NA	A2M	30072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	9263143	9263504	9263324	Y	KLRB1,KLRG1	A2M	NA	NA	NA	NA	A2M	3321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	9308932	9309318	9309073	Y	KLRB1,M6PR,KLRG1,PZP	A2M,PZP	NA	NA	NA	NA	A2M	42107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	9802084	9802505	9802358	Y	CLECL1,CLEC7A,CLEC2B,CLEC12A,CLEC12A,CD69,KLRB1,CLEC2D,CLEC2D,CLEC2D	RP11-705C15.4	NA	NA	NA	NA	RP11-705C15.4	3479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr12	9803369	9803672	9803507	Y	KLRF1,CLEC7A,CLEC2B,CLEC12A,CLEC12A,CD69,KLRB1,CLEC2D,CLEC2D,CLEC2D	RP11-705C15.4	NA	NA	NA	NA	RP11-705C15.4	4764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	9804148	9804385	9804240	Y	CLECL1,CLEC7A,CLEC2B,CLEC12A,CLEC12A,CD69,KLRB1,CLEC2D,CLEC2D,CLEC2D	RP11-705C15.4	NA	NA	NA	NA	RP11-705C15.4	5543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	9986583	9986922	9986755	Y	NA	NA	NA	NA	NA	NA	RP11-705C15.4	187978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	10517487	10517775	10517755	Y	NA	RP11-277P12.20	NA	NA	NA	NA	RP11-277P12.20	3119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	10869298	10869573	10869459	Y	NA	NA	NA	NA	NA	NA	MAGOHB	105076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	11221356	11221421	11221389	Y	NA	NA	NA	NA	NA	NA	TAS2R14	100751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	11966137	11966507	11966203	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	ETV6	165349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	11976145	11976420	11976223	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	ETV6	175357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	12030986	12031138	12031062	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	BCL2L14	169640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	12038206	12038369	12038301	Y	ETV6,BCL2L14	NA	NA	NA	NA	NA	BCL2L14	162409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr12	12298245	12298581	12298464	Y	LRP6	RP11-267J23.4	NA	NA	NA	NA	RP11-267J23.4	36148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	12352896	12352921	12352909	Y	NA	NA	NA	NA	NA	NA	LRP6	65025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	12408234	12408471	12408413	Y	NA	LRP6	NA	NA	NA	NA	LRP6	9475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr12	12504083	12504386	12504252	Y	BCL2L14,MANSC1	MANSC1,LOH12CR2,LOH12CR1	NA	NA	NA	NA	MANSC1	2608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	12556548	12557081	12556810	Y	CDKN1B,LOH12CR1	LOH12CR2,LOH12CR1	NA	NA	NA	NA	LOH12CR1	48535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr12	12592534	12593034	12592768	Y	BCL2L14,LOH12CR1,DUSP16,CDKN1B	NA	NA	NA	NA	NA	LOH12CR1	84521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	12602381	12602995	12602706	Y	BCL2L14,DUSP16	NA	NA	NA	NA	NA	LOH12CR1	94368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.419096623677355
chr12	12605511	12605890	12605533	Y	NA	NA	NA	NA	NA	NA	LOH12CR1	97498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	12646905	12646967	12646936	Y	LOH12CR1,DUSP16,CDKN1B	NA	LOH12CR1	IMR90	Hi-C	24141950	DUSP16	66350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	12663035	12663537	12663259	Y	BCL2L14,DUSP16	DUSP16	LOH12CR1	IMR90	Hi-C	24141950	DUSP16	49780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	12708006	12708373	12708190	Y	NA	DUSP16	NA	NA	NA	NA	DUSP16	4944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	12711175	12711335	12711320	Y	NA	DUSP16	NA	NA	NA	NA	DUSP16	1982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr12	12711400	12711706	12711553	Y	BCL2L14,DUSP16	DUSP16	LOH12CR1	MCF7	ChIA-PET	22265404	DUSP16	1611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr12	12872470	12873013	12872652	Y	MANSC1,LOH12CR1,DUSP16,CDKN1B,APOLD1	GPR19,CDKN1B	NA	NA	NA	NA	CDKN1B	6478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	12883612	12883681	12883638	Y	APOLD1	GPR19,CDKN1B	NA	NA	NA	NA	CDKN1B	17620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	13025126	13025347	13025203	Y	NA	RPL13AP20,GPRC5A	NA	NA	NA	NA	RPL13AP20	1086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	13034551	13034650	13034602	Y	DDX47,GPRC5A	RPL13AP20,GPRC5A,RP11-392P7.6	NA	NA	NA	NA	GPRC5A	7066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	13124934	13124993	13124963	Y	NA	RP11-392P7.6,HTR7P1,HEBP1	GPRC5D	IMR90	Hi-C	24141950	HTR7P1	25819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	13253893	13254547	13254171	Y	CDKN1B,EMP1	GSG1	NA	NA	NA	NA	GSG1	72	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	14410616	14411017	14410842	Y	PLBD1	NA	ATF7IP	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ATF7IP	105593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	14994752	14995023	14994926	Y	H2AFJ,C12orf69,ART4	WBP11,C12orf60,ART4	NA	NA	NA	NA	ART4	323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr12	15782024	15782386	15782102	Y	NA	NA	NA	NA	NA	NA	RP11-6K23.1	191563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	15899366	15899730	15899546	Y	PTPRO	NA	NA	NA	NA	NA	EPS8	133533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr12	16553699	16554214	16553898	Y	NA	NA	NA	NA	NA	NA	MGST1	55623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.549260819616166
chr12	16554253	16554721	16554664	Y	NA	NA	NA	NA	NA	NA	MGST1	56177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.61220574962453
chr12	18511225	18511610	18511392	Y	NA	NA	NA	NA	NA	NA	PLEKHA5	769038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	19048962	19049238	19049131	Y	NA	NA	PIK3C2G	IMR90	Hi-C	24141950	PLEKHA5	231410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	19566135	19566181	19566158	Y	NA	AEBP2,EEF1A1P4	NA	NA	NA	NA	AEBP2	11156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr12	21625286	21625603	21625493	Y	NA	PYROXD1,TCEB1P31,RECQL,GOLT1B	NA	NA	NA	NA	TCEB1P31	26038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	22779557	22779668	22779574	Y	NA	ETNK1	NA	NA	NA	NA	ETNK1	3548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	23738517	23738975	23738828	Y	SOX5	NA	NA	NA	NA	NA	SOX5	362991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	23746822	23747228	23747075	Y	SOX5	NA	NA	NA	NA	NA	SOX5	354738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	23770675	23770997	23770816	Y	SOX5	NA	NA	NA	NA	NA	SOX5	330969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr12	23804787	23805114	23804951	Y	NA	NA	NA	NA	NA	NA	SOX5	296852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	23934001	23934216	23934209	Y	SOX5	NA	NA	NA	NA	NA	SOX5	167750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr12	24020753	24020934	24020819	Y	NA	NA	NA	NA	NA	NA	SOX5	81032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr12	24062598	24062930	24062672	Y	SOX5	SOX5	NA	NA	NA	NA	SOX5	39036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	24903057	24903444	24903231	Y	SOX5	NA	SOX5	IMR90	Hi-C	24141950	BCAT1	196949	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.32737890508622
chr12	25053045	25053436	25053335	Y	KRAS,BCAT1,BCAT1,BCAT1	BCAT1	NA	NA	NA	NA	BCAT1	46957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	25402760	25403150	25403054	Y	LRMP,CASC1,KRAS	KRAS	NA	NA	NA	NA	KRAS	890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	25538390	25538869	25538521	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	16493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	25539082	25539407	25539207	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	15955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.934336233028406
chr12	25539458	25539791	25539651	Y	NA	RNU4-67P	BCAT1,LYRM5,CASC1,KRAS,RASSF8	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNU4-67P	15571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	26267263	26267811	26267415	Y	NA	BHLHE41	NA	NA	NA	NA	BHLHE41	8249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr12	26427494	26428032	26427844	Y	NA	NA	SSPN,BHLHE41,ITPR2	IMR90	Hi-C	24141950	BHLHE41	151434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	26495152	26495452	26495369	Y	ITPR2	NA	NA	NA	NA	NA	BHLHE41	219092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	26512613	26512980	26512754	Y	NA	NA	NA	NA	NA	NA	BHLHE41	236553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	26522536	26522924	26522687	Y	ITPR2	NA	NA	NA	NA	NA	BHLHE41	246476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr12	26538001	26538320	26538173	Y	NA	NA	NA	NA	NA	NA	BHLHE41	261941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	26613437	26613637	26613504	Y	FGFR1OP2	NA	NA	NA	NA	NA	BHLHE41	337377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr12	26622713	26623111	26622903	Y	NA	NA	NA	NA	NA	NA	BHLHE41	346653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	26626326	26626794	26626426	Y	FGFR1OP2	NA	NA	NA	NA	NA	BHLHE41	350266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	26663094	26663473	26663334	Y	NA	NA	NA	NA	NA	NA	ITPR2	320658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr12	26805266	26805775	26805502	Y	NA	NA	NA	NA	NA	NA	ITPR2	178356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	26864607	26864808	26864708	Y	NA	NA	NA	NA	NA	NA	ITPR2	119323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	26889779	26890108	26889932	Y	C12orf71	NA	NA	NA	NA	NA	ITPR2	94023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.666934047823438
chr12	26921613	26921734	26921675	Y	NA	NA	NA	NA	NA	NA	ITPR2	62397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr12	26944008	26944360	26944283	Y	STK38L,C12orf71	ITPR2	NA	NA	NA	NA	ITPR2	39771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	26945295	26945340	26945320	Y	C12orf71,ITPR2	ITPR2	NA	NA	NA	NA	ITPR2	38791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	27006268	27006662	27006518	Y	NA	ITPR2	ITPR2,TM7SF3	IMR90	Hi-C	24141950	ITPR2	22137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	27031783	27031911	27031851	Y	ITPR2	ITPR2	ITPR2	IMR90	Hi-C	24141950	ITPR2	47652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	27532512	27532752	27532665	Y	C12orf71	ARNTL2	NA	NA	NA	NA	ARNTL2	48725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	27565982	27566076	27566029	Y	ARNTL2	NA	NA	NA	NA	NA	ARNTL2	82195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	27593588	27593602	27593594	Y	C12orf71	NA	NA	NA	NA	NA	PPFIBP1	80762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	27702695	27702969	27702865	Y	NA	PPFIBP1	NA	NA	NA	NA	PPFIBP1	28331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr12	28176067	28176342	28176190	Y	PTHLH,PTHLH	NA	PTHLH	IMR90	Hi-C	24141950	CCDC91	107840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	28275745	28275985	28275876	Y	NA	CCDC91	PTHLH	IMR90	Hi-C	24141950	CCDC91	8197	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	28433746	28433796	28433771	Y	NA	RNU4-54P	NA	NA	NA	NA	RNU4-54P	36600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	28501330	28501622	28501413	Y	NA	RNU4-54P	NA	NA	NA	NA	RNU4-54P	30934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	30945631	30945953	30945771	Y	NA	CAPRIN2,LINC00941	NA	NA	NA	NA	LINC00941	24	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	30949517	30949896	30949519	Y	CAPRIN2	CAPRIN2,LINC00941	NA	NA	NA	NA	LINC00941	3540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	31464460	31464546	31464537	Y	NA	FAM60A	NA	NA	NA	NA	FAM60A	13446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr12	31523025	31523181	31523129	Y	METTL20,FAM60A,FAM60A	FAM60A	NA	NA	NA	NA	FAM60A	45033	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	31523933	31524084	31523973	Y	DDX11,METTL20,FAM60A,FAM60A	FAM60A	NA	NA	NA	NA	FAM60A	45941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr12	31524246	31524432	31524371	Y	NA	FAM60A	NA	NA	NA	NA	FAM60A	46254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	31602301	31602617	31602553	Y	NA	NA	NA	NA	NA	NA	FAM60A	124309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	31804886	31805136	31805063	Y	NA	METTL20	NA	NA	NA	NA	METTL20	6792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr12	31899631	31900083	31899901	Y	AMN1,H3F3C	AMN1,RP11-467L13.5,H3F3C	METTL20,AMN1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-467L13.5	5568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	31902136	31902566	31902240	Y	C12orf35,AMN1,H3F3C	AMN1,RP11-467L13.5,H3F3C	AMN1	K562	ChIA-PET	22265404	RP11-467L13.5	3085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr12	32263319	32263494	32263407	Y	NA	BICD1	NA	NA	NA	NA	BICD1	5550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	32380941	32381343	32381040	Y	NA	NA	NA	NA	NA	NA	BICD1	123172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	32405506	32405740	32405609	Y	NA	NA	NA	NA	NA	NA	BICD1	147737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	32426821	32426960	32426892	Y	NA	NA	NA	NA	NA	NA	BICD1	169052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	32635235	32635487	32635321	Y	NA	NA	FGD4	IMR90	Hi-C	24141950	DNM1L	194647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	32881013	32881116	32881065	Y	NA	RP11-278C7.1,YARS2	NA	NA	NA	NA	RP11-278C7.1	2692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	33044985	33045279	33045082	Y	NA	PKP2	NA	NA	NA	NA	PKP2	2495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	33048688	33048837	33048763	Y	PKP2	PKP2	NA	NA	NA	NA	PKP2	914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr12	38493611	38493806	38493706	Y	NA	NA	NA	NA	NA	NA	ALG10B	214574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310622768016884
chr12	39104065	39104215	39104143	Y	CPNE8	NA	NA	NA	NA	NA	CPNE8	195017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr12	39539251	39539539	39539453	Y	NA	NA	NA	NA	NA	NA	CPNE8	240019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	40467954	40468269	40468112	Y	NA	RPL30P13,SLC2A13	NA	NA	NA	NA	RPL30P13	7562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	42470575	42470704	42470641	Y	NA	NA	NA	NA	NA	NA	GXYLT1	65977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	42537125	42537342	42537234	Y	NA	GXYLT1	NA	NA	NA	NA	GXYLT1	444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	42598855	42599145	42599001	Y	YAF2,YAF2,YAF2	YAF2,PPHLN1	NA	NA	NA	NA	YAF2	31006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	42825856	42826146	42826103	Y	YAF2,YAF2,YAF2	NA	NA	NA	NA	NA	ZCRB1	107936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.384252770419656
chr12	44386878	44387178	44387042	Y	NA	NA	NA	NA	NA	NA	TMEM117	159108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	44910336	44910664	44910572	Y	NA	NA	NA	NA	NA	NA	TMEM117	682566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	45594301	45594584	45594437	Y	ANO6,ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	ANO6	13186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	45626822	45627300	45627014	Y	ANO6,ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	18998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	45628991	45629732	45629167	Y	ANO6,ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	21167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	45638356	45638816	45638511	Y	ANO6,ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	30532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	45644542	45644793	45644668	Y	ANO6	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	36718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	45654086	45654401	45654190	Y	NA	ANO6,PLEKHA8P1	NA	NA	NA	NA	PLEKHA8P1	46262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.330838741385604
chr12	45703000	45703363	45703138	Y	NA	NA	NA	NA	NA	NA	PLEKHA8P1	95176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	45820263	45820702	45820515	Y	NA	NA	NA	NA	NA	NA	PLEKHA8P1	212439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr12	46380247	46380714	46380477	Y	SCAF11	SCAF11	NA	NA	NA	NA	SCAF11	3189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	46609835	46610258	46610179	Y	ARID2,SCAF11,SLC38A1	NA	NA	NA	NA	NA	SLC38A1	51542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	46636369	46636708	46636589	Y	SCAF11,SLC38A1	SLC38A1	NA	NA	NA	NA	SLC38A1	25092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr12	46786554	46786766	46786571	Y	NA	SLC38A2,RP11-96H19.1	NA	NA	NA	NA	RP11-96H19.1	11092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	46809510	46809878	46809694	Y	NA	SLC38A2,RP11-96H19.1	SLC38A4	IMR90	Hi-C	24141950	RP11-96H19.1	34048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	46824163	46824471	46824386	Y	NA	RP11-96H19.1	SLC38A2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	48701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	46844808	46845174	46844835	Y	NA	NA	NA	NA	NA	NA	RP11-96H19.1	69346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	46845656	46846014	46845792	Y	NA	NA	NA	NA	NA	NA	RP11-96H19.1	70194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	46867492	46867759	46867536	Y	NA	NA	SLC38A2,SLC38A4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	92030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.340701170787428
chr12	46886273	46886657	46886465	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	110811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr12	46888080	46888552	46888358	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	112618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr12	46917975	46918280	46918143	Y	NA	NA	SLC38A2,SLC38A4,SLC38A1,AMIGO2	IMR90	Hi-C	24141950	RP11-96H19.1	142513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.861197856797907
chr12	46951455	46951753	46951519	Y	SLC38A2	NA	SLC38A2	IMR90	Hi-C	24141950	RP11-96H19.1	175993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	47033293	47033660	47033445	Y	NA	NA	SLC38A2	IMR90	Hi-C	24141950	RP11-96H19.1	257831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	47053760	47053887	47053821	Y	NA	NA	SLC38A2,SLC38A1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	278298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	47058276	47058667	47058611	Y	SLC38A2	NA	SLC38A2,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	282814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	47058808	47059020	47058972	Y	SLC38A2	NA	SLC38A2,SLC38A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	283346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	47066053	47066292	47066182	Y	SLC38A2	NA	SLC38A1,SLC38A2,SLC38A4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-96H19.1	290591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	47263284	47263605	47263445	Y	NA	NA	SLC38A1,SLC38A4,RPAP3	IMR90	Hi-C	24141950	RP11-96H19.1	487822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	48076459	48076736	48076534	Y	NA	RPAP3,RP1-197B17.3	NA	NA	NA	NA	RPAP3	21108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	48431282	48431505	48431439	Y	NA	COL2A1	NA	NA	NA	NA	COL2A1	35013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	49452736	49452852	49452791	Y	NA	PRKAG1,RHEBL1,LMBR1L	NA	NA	NA	NA	RHEBL1	8956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	49628278	49628526	49628405	Y	LMBR1L,TUBA1A	TUBA1C,TUBA1A	DHH,TUBA1A,RHEBL1,TUBA1C,TUBA1B,PRPH,MLL2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TUBA1A	47171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.614674190209482
chr12	49641026	49641246	49641136	Y	NA	NA	RHEBL1,TUBA1C,TUBA1A,LMBR1L,DHH,MLL2,TUBA1B,SPATS2,MCRS1,FAM186B,PRPH	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TUBA1A	59919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	50221084	50221421	50221231	Y	NCKAP5L	NCKAP5L,BCDIN3D	NA	NA	NA	NA	NCKAP5L	551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	50899744	50900179	50899947	Y	DIP2B	DIP2B	NA	NA	NA	NA	DIP2B	2976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr12	50913232	50913640	50913328	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	16464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	50926707	50927114	50926974	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	29939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	50931365	50931732	50931390	Y	NA	DIP2B	NA	NA	NA	NA	DIP2B	34597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	50955219	50955226	50955223	Y	NA	NA	NA	NA	NA	NA	DIP2B	58451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	51014249	51014685	51014387	Y	NA	NA	NA	NA	NA	NA	DIP2B	117481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	51035200	51035582	51035391	Y	NA	NA	NA	NA	NA	NA	ATF1	119911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	51180627	51180997	51180727	Y	SMAGP	ATF1	TMPRSS12	IMR90	Hi-C	24141950	ATF1	25134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	51322260	51322312	51322286	Y	DIP2B	METTL7A	NA	NA	NA	NA	METTL7A	7005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr12	51327584	51327783	51327682	Y	NA	METTL7A	NA	NA	NA	NA	METTL7A	12329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.741878319391067
chr12	51536826	51537135	51537116	Y	CSRNP2	TFCP2	NA	NA	NA	NA	TFCP2	27791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	51765347	51765619	51765517	Y	FIGNL2,GALNT6	GALNT6	BIN2,CELA1	IMR90	Hi-C	24141950	GALNT6	19032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	52241099	52241559	52241297	Y	NA	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	101892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	52241760	52242326	52241842	Y	SLC4A8,FIGNL2	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	101125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.709011792153246
chr12	52242460	52242886	52242778	Y	SLC4A8,ANKRD33	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	100565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr12	52243040	52243117	52243080	Y	SCN8A,ACVRL1,FIGNL2	NA	SCN8A,BIN2,GALNT6,SLC4A8,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	100334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	52249721	52249808	52249784	Y	SLC4A8,FIGNL2	NA	BIN2,SCN8A,SLC4A8,ANKRD33,ACVR1B,GALNT6,FIGNL2	IMR90	Hi-C	24141950	ACVR1B	93643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.107651212667887
chr12	52257333	52257459	52257384	Y	NA	NA	SCN8A,ACVR1B,SLC4A8	IMR90	Hi-C	24141950	ACVR1B	85992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	52257879	52258204	52258030	Y	NA	NA	SCN8A,ACVR1B,SLC4A8	IMR90	Hi-C	24141950	ACVR1B	85247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	52364914	52365223	52365052	Y	GRASP	ACVR1B,GRASP,NR4A1	NA	NA	NA	NA	ACVR1B	21463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	52418719	52418897	52418793	Y	NR4A1,ACVRL1,GRASP,NR4A1	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	4103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr12	52419301	52419935	52419633	Y	NR4A1,GRASP,NR4A1	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	4685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	52426547	52427164	52426822	Y	NR4A1,ACVR1B,ACVR1B,GRASP	GRASP,NR4A1,C12orf44	NA	NA	NA	NA	NR4A1	11931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	52457778	52458372	52458110	Y	NA	NR4A1,C12orf44	NA	NA	NA	NA	C12orf44	2658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	52512288	52512603	52512469	Y	NR4A1	NA	GRASP,NR4A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	C12orf44	51258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	52540964	52541526	52541224	Y	KRT80,KRT7,KRT6A,KRT5,NR4A1,C12orf44	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	42258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.291229437640749
chr12	52542210	52542726	52542513	Y	KRT80,KRT7,KRT6B,KRT6A,KRT5,C12orf44	KRT80	KRT8,KRT84	MCF7	ChIA-PET	22265404	KRT80	41058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr12	52543416	52543547	52543482	Y	NA	KRT80	NA	NA	NA	NA	KRT80	40237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	52674043	52674518	52674247	Y	NR4A1,C12orf44,KRT84,KRT6A,KRT5,KRT80	NA	NA	NA	NA	NA	KRT80	90259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	52674655	52675081	52674843	Y	C12orf44,KRT80,KRT7	NA	NA	NA	NA	NA	KRT80	90871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	52950129	52950435	52950283	Y	KRT82	KRT5	NA	NA	NA	NA	KRT5	37658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	53267781	53268340	53268093	Y	PFDN5	NA	KRT18,KRT8,LOC283403,EIF4B,KRT80,LOC283404	MCF7	ChIA-PET	22265404	KRT18	72315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr12	53273269	53273433	53273418	Y	NA	NA	NA	NA	NA	NA	KRT18	67222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	53301815	53302147	53302072	Y	KRT1,KRT76,KRT8	KRT18,KRT8	NA	NA	NA	NA	KRT18	38508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	53318665	53319069	53319016	Y	NA	KRT18,KRT8	NA	NA	NA	NA	KRT18	21586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr12	53339346	53339557	53339459	Y	EIF4B,KRT8,KRT18,KRT18	KRT18,KRT8	NA	NA	NA	NA	KRT18	1098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.445883431263162
chr12	53340686	53341032	53340856	Y	NA	KRT18,KRT8	NA	NA	NA	NA	KRT18	31	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	53445016	53445392	53445120	Y	IGFBP6,C12orf10,TENC1,TENC1,TENC1,SPRYD3	EIF4B,TENC1,RP11-983P16.4,SPRYD3,IGFBP6,SOAT2	NA	NA	NA	NA	RP11-983P16.4	830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr12	53515585	53515944	53515597	Y	NA	SPRYD3,IGFBP6,SOAT2,HIGD1AP1,RP11-1136G11.6	NA	NA	NA	NA	HIGD1AP1	17893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280384267501579
chr12	53610849	53611063	53610958	Y	NA	ZNF740,CSAD,RARG,MFSD5,ESPL1	NA	NA	NA	NA	RARG	13701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	53615195	53615822	53615501	Y	CSAD,SP1,PRR13,PFDN5	ZNF740,CSAD,RARG,MFSD5,ESPL1	NA	NA	NA	NA	RARG	8942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.342506554517358
chr12	53726510	53726905	53726727	Y	NA	PFDN5,C12orf10,RP11-680A11.5,AAAS,SP1	NA	NA	NA	NA	AAAS	9862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	53765037	53765535	53765115	Y	CSAD,ITGB7,PFDN5,SP1,SP1,PRR13	AAAS,SP1	SP1,AAAS,SP7,PCBP2,PRR13,AMHR2,LOC100652999,MAP3K12,TARBP2,NPFF,ATF7	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SP1	6425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr12	53890170	53890360	53890251	Y	MFSD5	MAP3K12,TARBP2	NA	NA	NA	NA	MAP3K12	1487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	54052823	54053029	54052960	Y	NA	ATF7,RP11-972K6.1,ATP5G2	NA	NA	NA	NA	ATP5G2	16163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	54090300	54090537	54090319	Y	NA	ATP5G2,CALCOCO1	NA	NA	NA	NA	ATP5G2	21108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	54198975	54199124	54199050	Y	NA	SNORD81	HOXC12,HOXC13,SMUG1,HOTAIR,HOXC11,HOXC8,HOXC9,MIR196A2,HOXC10	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNORD81	15886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr12	54563652	54563918	54563802	Y	NA	RP11-834C11.4,SMUG1	NA	NA	NA	NA	SMUG1	16860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	54611719	54612027	54611873	Y	NA	SMUG1	NA	NA	NA	NA	SMUG1	30941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	54690191	54690205	54690198	Y	NFE2	CBX5,HNRNPA1,NFE2,COPZ1	NA	NA	NA	NA	NFE2	2700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	54700865	54701198	54701063	Y	NCKAP1L,NFE2,NFE2,ZNF385A	CBX5,HNRNPA1,NFE2,COPZ1	COPZ1,CBX5,HNRNPA1,NFE2,ITGA5,ZNF385A	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	COPZ1	7879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	54746696	54746816	54746742	Y	NA	NA	NA	NA	NA	NA	COPZ1	53710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	54752421	54752649	54752549	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	ITGA5	58595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr12	54752671	54753884	54753119	Y	NCKAP1L,ITGA5,ZNF385A,GPR84	NA	NA	NA	NA	NA	ITGA5	57360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr12	54949338	54949510	54949424	Y	NA	PDE1B,PPP1R1A	NA	NA	NA	NA	PDE1B	8204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	55807914	55808439	55808095	Y	NA	NA	NA	NA	NA	NA	METTL7B	264891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	55808460	55808880	55808766	Y	NA	NA	NA	NA	NA	NA	METTL7B	264450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146437361812958
chr12	56132069	56132385	56132308	Y	OR6C4,OR10P1,SMARCC2,IKZF4	BLOC1S1,RDH5,RP11-644F5.11,CD63,GDF11	NA	NA	NA	NA	GDF11	2679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	56147551	56147694	56147624	Y	NA	BLOC1S1,RDH5,RP11-644F5.11,CD63,GDF11	NA	NA	NA	NA	GDF11	12487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr12	56219844	56220081	56219962	Y	OR6C3	SARNP,ORMDL2,TMEM198B,DNAJC14,MMP19,RNU1-69P	NA	NA	NA	NA	TMEM198B	1448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr12	56323148	56323586	56323313	Y	PAN2,PAN2,DGKA	DGKA,WIBG,CDK2,PMEL,RAB5B	NA	NA	NA	NA	WIBG	816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	56474601	56474862	56474633	Y	SLC39A5,APOF,OR10P1,METTL7B,ERBB3,ERBB3	RPS26,ERBB3,PA2G4,RPL41,ZC3H10,ESYT1	NA	NA	NA	NA	ERBB3	2960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.815999947966111
chr12	56690284	56690436	56690361	Y	NA	ANKRD52,COQ10A,RP11-977G19.11,CS,RP11-977G19.10,CNPY2,PAN2,IL23A	NA	NA	NA	NA	RP11-977G19.11	1490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	56831514	56831759	56831654	Y	IKZF4	TIMELESS,SPRYD4,GLS2	NA	NA	NA	NA	TIMELESS	9428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	56876109	56876291	56876201	Y	NA	TIMELESS,SPRYD4,GLS2,RP11-153M3.1,RBMS2	NA	NA	NA	NA	GLS2	3907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	57026737	57026855	57026796	Y	NA	BAZ2A,SNORD59A,ATP5B	NA	NA	NA	NA	BAZ2A	1745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	57028610	57029302	57028864	Y	NA	BAZ2A,SNORD59A,ATP5B	NA	NA	NA	NA	BAZ2A	10	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.37206468822348
chr12	57073427	57073817	57073648	Y	NA	BAZ2A,SNORD59A,ATP5B,PTGES3,NACA	NA	NA	NA	NA	PTGES3	6342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	57077806	57078249	57078184	Y	COQ10A,PAN2,PAN2	BAZ2A,SNORD59A,ATP5B,PTGES3,NACA	NA	NA	NA	NA	PTGES3	1910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	57079143	57079532	57079338	Y	NA	SNORD59A,ATP5B,PTGES3,NACA	NA	NA	NA	NA	PTGES3	627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	57462088	57462242	57462164	Y	R3HDM2,MBD6,ARHGAP9,ARHGAP9,ARHGAP9,BAZ2A,STAT6,STAT6	TAC3,MYO1A,TMEM194A,NAB2	TAC3,ZBTB39,MYO1A,GPR182	IMR90	Hi-C	24141950	TMEM194A	17604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	57520981	57521279	57521090	Y	NA	TMEM194A,NAB2,LRP1,STAT6	NA	NA	NA	NA	LRP1	705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.423370447992238
chr12	57523550	57524188	57523895	Y	MBD6,DDIT3,NAB2,STAT6,STAT6,LRP1	TMEM194A,NAB2,LRP1	NA	NA	NA	NA	STAT6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	57635972	57636429	57636328	Y	SLC26A10,R3HDM2,DTX3,B4GALNT1,ARHGEF25,NDUFA4L2	NXPH4,SHMT2,NDUFA4L2	NA	NA	NA	NA	NDUFA4L2	3474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	57812894	57812946	57812929	Y	NA	R3HDM2,INHBC,INHBE,GLI1	NA	NA	NA	NA	R3HDM2	9842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	57813803	57814254	57814252	Y	NA	R3HDM2,INHBC,INHBE,GLI1	NA	NA	NA	NA	R3HDM2	8534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	57986482	57986782	57986634	Y	R3HDM2,AGAP2,KIF5A,DTX3,B4GALNT1,ARHGEF25	DCTN2,KIF5A,PIP4K2C,DTX3,ARHGEF25,SLC26A10,B4GALNT1	NA	NA	NA	NA	PIP4K2C	3525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	58187748	58188085	58187957	Y	DDIT3,OS9	MARCH9,CDK4,METTL21B,METTL1,RP11-571M6.15,TSFM	NA	NA	NA	NA	TSFM	13376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	58238225	58238735	58238639	Y	AGAP2,TSPAN31,CDK4,METTL1,METTL21B,TSFM,XRCC6BP1,CTDSP2	NA	NA	NA	NA	NA	CTDSP2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr12	58337769	58337952	58337777	Y	NA	RP11-620J15.3,XRCC6BP1	NA	NA	NA	NA	XRCC6BP1	4445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr12	58349067	58349080	58349075	Y	XRCC6BP1	RP11-620J15.3,XRCC6BP1	NA	NA	NA	NA	XRCC6BP1	15743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	58819259	58819609	58819396	Y	LRIG3,LRIG3	NA	NA	NA	NA	NA	XRCC6BP1	485935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	59300729	59300915	59300862	Y	LRIG3,LRIG3	LRIG3,RP11-150C16.1	NA	NA	NA	NA	LRIG3	11388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr12	62644447	62644716	62644645	Y	C12orf61,USP15	USP15,FAM19A2	USP15	MCF7	ChIA-PET	22265404	USP15	7403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	62685666	62685938	62685802	Y	C12orf61,MON2,USP15	USP15,FAM19A2	NA	NA	NA	NA	FAM19A2	14735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	62970708	62971108	62970733	Y	NA	RP11-631N16.2,C12orf61,MIRLET7I	NA	NA	NA	NA	RP11-631N16.2	23424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	62983522	62983540	62983531	Y	NA	RP11-631N16.2,C12orf61,MIRLET7I	NA	NA	NA	NA	RP11-631N16.2	10992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	63051832	63051994	63051914	Y	MON2,PPM1H	NA	NA	NA	NA	NA	MIRLET7I	56366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr12	63086673	63087045	63086801	Y	NA	NA	NA	NA	NA	NA	MIRLET7I	91207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	63096065	63096306	63096205	Y	USP15,C12orf61	NA	NA	NA	NA	NA	MIRLET7I	100599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	63106205	63106593	63106548	Y	NA	NA	NA	NA	NA	NA	MIRLET7I	110739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	63149457	63149757	63149616	Y	NA	NA	NA	NA	NA	NA	MIRLET7I	153991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	63179567	63180349	63179723	Y	NA	NA	NA	NA	NA	NA	PPM1H	146468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr12	63211361	63211986	63211672	Y	PPM1H	NA	NA	NA	NA	NA	PPM1H	114831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	63240359	63240641	63240456	Y	NA	NA	NA	NA	NA	NA	PPM1H	86176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	63304430	63304640	63304492	Y	PPM1H	PPM1H	NA	NA	NA	NA	PPM1H	22177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	64311746	64312216	64311964	Y	NA	NA	NA	NA	NA	NA	SRGAP1	75673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	64312639	64312950	64312683	Y	SRGAP1	NA	NA	NA	NA	NA	SRGAP1	76566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	64386107	64386411	64386216	Y	NA	NA	NA	NA	NA	NA	SRGAP1	150034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	64414724	64414736	64414730	Y	NA	NA	NA	NA	NA	NA	SRGAP1	178651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	64546689	64546709	64546700	Y	NA	NA	NA	NA	NA	NA	C12orf66	67367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	64855437	64855720	64855602	Y	C12orf66,TBK1	TBK1	NA	NA	NA	NA	TBK1	11777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	65005842	65006280	65005896	Y	GNS,C12orf66,TBK1,RASSF3	RASSF3	NA	NA	NA	NA	RASSF3	3549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	65012959	65013250	65013088	Y	TBK1,RASSF3,GNS	RASSF3	NA	NA	NA	NA	RASSF3	10666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	65019058	65019979	65019210	Y	TBK1,RASSF3,GNS	RASSF3	NA	NA	NA	NA	RASSF3	16765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.370939159695534
chr12	65074143	65074354	65074186	Y	RASSF3,LEMD3	NA	NA	NA	NA	NA	RASSF3	71850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	65140575	65140710	65140636	Y	TBK1,RASSF3,LEMD3,GNS	GNS	NA	NA	NA	NA	GNS	10517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	65262498	65262651	65262575	Y	NA	NA	NA	NA	NA	NA	GNS	111271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	66135126	66135637	66135353	Y	HMGA2	NA	NA	NA	NA	NA	HMGA2	80274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	66216365	66216749	66216512	Y	HMGA2	HMGA2	NA	NA	NA	NA	HMGA2	454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr12	66237933	66238219	66238043	Y	HMGA2	HMGA2	NA	NA	NA	NA	HMGA2	22022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	66242690	66243107	66242729	Y	HMGA2	HMGA2	NA	NA	NA	NA	HMGA2	26779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	66285844	66286273	66285967	Y	IRAK3	NA	NA	NA	NA	NA	HMGA2	69933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	66286698	66286979	66286899	Y	IRAK3	NA	NA	NA	NA	NA	HMGA2	70787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	66289506	66290040	66289751	Y	NA	NA	NA	NA	NA	NA	HMGA2	73595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.685835752027301
chr12	66292016	66292293	66292025	Y	NA	NA	NA	NA	NA	NA	HMGA2	76105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	66311039	66311339	66311117	Y	HMGA2	NA	NA	NA	NA	NA	HMGA2	95128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	66440623	66440641	66440633	Y	NA	RP11-118B13.1	HMGA2,MSRB3,LLPH	IMR90	Hi-C	24141950	RP11-118B13.1	11608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	66628292	66629290	66628922	Y	TMBIM4,IRAK3,HELB	RBMS1P1	NA	NA	NA	NA	RBMS1P1	1278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.345135092847073
chr12	66697484	66697842	66697547	Y	HELB	HELB	NA	NA	NA	NA	HELB	3159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	68181405	68181790	68181598	Y	NA	NA	NA	NA	NA	NA	DYRK2	141287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	68385084	68385454	68385150	Y	DYRK2,IFNG	NA	NA	NA	NA	NA	MDM1	338707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	68705850	68706149	68706026	Y	IL22,SLC35E3,NUP107,MDM2,MDM1	MDM1	NA	NA	NA	NA	MDM1	18012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	68752517	68752875	68752786	Y	NA	MDM1	RAP1B,SNORA70G,LOC100507250,NUP107,MDM2,MDM1,SLC35E3	IMR90	Hi-C	24141950	MDM1	28356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	68758917	68759565	68759229	Y	IFNG,RAP1B	MDM1	RAP1B,NUP107,LOC100507250	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MDM1	34756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	68925817	68926196	68926068	Y	IL22,MDM1,NUP107,MDM2	NA	MDM1	IMR90	Hi-C	24141950	RAP1B	76423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	69019747	69019936	69019838	Y	NA	RAP1B,RP11-254B13.3	NA	NA	NA	NA	RP11-254B13.3	14837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	69036661	69037118	69036873	Y	NA	RAP1B,RP11-254B13.3,RPL7P42,NUP107	NA	NA	NA	NA	RP11-254B13.3	1888	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.362472643115
chr12	69122207	69122406	69122269	Y	NA	RPL7P42,NUP107,SLC35E3	NA	NA	NA	NA	SLC35E3	15480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	69150078	69150205	69150130	Y	NA	SLC35E3,MDM2	NA	NA	NA	NA	SLC35E3	12192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	69163885	69164101	69163897	Y	SLC35E3	SLC35E3,MDM2	NA	NA	NA	NA	SLC35E3	25999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	69180946	69181662	69181342	Y	NA	SLC35E3,MDM2	SLC35E3	IMR90	Hi-C	24141950	MDM2	18294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr12	69200663	69200867	69200763	Y	CPSF6,CPM,CPM,MDM1,RAP1B,NUP107,SLC35E3,MDM2	MDM2	NA	NA	NA	NA	MDM2	707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	69220588	69221011	69220784	Y	NA	MDM2	NA	NA	NA	NA	MDM2	20632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	69634325	69634686	69634559	Y	SLC35E3,MDM2,YEATS4,RAB3IP,RAB3IP,FRS2,CCT2,CCT2,CPSF6	CPSF6	NA	NA	NA	NA	CPSF6	3008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr12	69686526	69686874	69686654	Y	NA	NA	NA	NA	NA	NA	LYZ	53247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	69722229	69722626	69722379	Y	LYZ	LYZ,RP11-1143G9.4,YEATS4	CPSF6,YEATS4	K562	ChIA-PET	22265404	LYZ	17495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.254580200653119
chr12	69723846	69724038	69723894	Y	LYZ	LYZ,RP11-1143G9.4,YEATS4	CPSF6,YEATS4	K562	ChIA-PET	22265404	LYZ	16083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr12	69724869	69725108	69724964	Y	LYZ	LYZ,RP11-1143G9.4,YEATS4	YEATS4	K562	ChIA-PET	22265404	LYZ	15013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.562574430340288
chr12	69725132	69725785	69725647	Y	CPM,LYZ	LYZ,RP11-1143G9.4,YEATS4	YEATS4	K562	ChIA-PET	22265404	LYZ	14336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr12	69726696	69726959	69726870	Y	NA	LYZ,RP11-1143G9.4,YEATS4	YEATS4	K562	ChIA-PET	22265404	LYZ	13162	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.05915356528147
chr12	69731953	69732266	69732062	Y	CPM,CPM,LYZ	LYZ,RP11-1143G9.4,YEATS4	LYZ	K562	ChIA-PET	22265404	LYZ	7855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	69868200	69868446	69868430	Y	CPSF6,YEATS4,RAB3IP,FRS2,CCT2,CCT2	FRS2	NA	NA	NA	NA	FRS2	6071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	70633612	70633702	70633681	Y	NA	CNOT2,RP11-611E13.2	NA	NA	NA	NA	CNOT2	1072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	70644560	70644959	70644584	Y	NA	CNOT2,RP11-611E13.2	NA	NA	NA	NA	RP11-611E13.2	9420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	72125251	72125450	72125351	Y	NA	TMEM19,RP11-498M15.1,RAB21	NA	NA	NA	NA	RAB21	21204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr12	72125908	72126059	72125950	Y	NA	TMEM19,RP11-498M15.1,RAB21	NA	NA	NA	NA	RAB21	20595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.761603178194713
chr12	72165791	72165958	72165868	Y	NA	RAB21	NA	NA	NA	NA	RAB21	19137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	72691947	72692219	72692098	Y	TPH2,TRHDE	NA	NA	NA	NA	NA	TBC1D15	460460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	75878955	75879237	75879096	Y	NA	GLIPR1,KRR1	NA	NA	NA	NA	GLIPR1	6495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	75900907	75901415	75901091	Y	KRR1	GLIPR1,KRR1	NA	NA	NA	NA	KRR1	2001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	75902459	75902855	75902619	Y	KRR1	GLIPR1,KRR1	NA	NA	NA	NA	KRR1	561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	76060831	76060974	76060901	Y	NA	NA	PHLDA1,OSBPL8	IMR90	Hi-C	24141950	KRR1	157415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr12	76061758	76061867	76061813	Y	NA	NA	PHLDA1,OSBPL8	IMR90	Hi-C	24141950	KRR1	158342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	76114737	76114966	76114777	Y	NA	NA	PHLDA1,NAP1L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KRR1	211321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	76337836	76338217	76338130	Y	GLIPR1,PHLDA1	NA	PHLDA1	MCF7	ChIA-PET	22265404	PHLDA1	87495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.279230096081484
chr12	76338350	76338647	76338468	Y	GLIPR1,PHLDA1	NA	PHLDA1	MCF7	ChIA-PET	22265404	PHLDA1	87065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.293857975970463
chr12	76345818	76345948	76345927	Y	GLIPR1,PHLDA1	NA	PHLDA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PHLDA1	79764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	76353921	76354019	76353970	Y	NA	NA	KRR1,PHLDA1,OSBPL8	IMR90	Hi-C	24141950	PHLDA1	71693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr12	76371613	76372127	76371872	Y	NA	NA	OSBPL8,PHLDA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PHLDA1	53585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.52049668601048
chr12	76373014	76373318	76373236	Y	GLIPR1,PHLDA1	NA	OSBPL8,PHLDA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PHLDA1	52394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	76414095	76414311	76414227	Y	NA	PHLDA1	NA	NA	NA	NA	PHLDA1	11401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	76429051	76429248	76429150	Y	NA	PHLDA1,NAP1L1	NA	NA	NA	NA	PHLDA1	3339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	76942062	76942423	76942413	Y	NA	OSBPL8	NA	NA	NA	NA	OSBPL8	9166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	76949947	76950382	76950258	Y	ZDHHC17,OSBPL8	OSBPL8	NA	NA	NA	NA	OSBPL8	1207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	76983962	76984148	76983987	Y	OSBPL8	OSBPL8	OSBPL8,ZDHHC17	IMR90	Hi-C	24141950	OSBPL8	32373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	77377580	77377874	77377727	Y	NA	NA	ZDHHC17	IMR90	Hi-C	24141950	E2F7	79486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	77456593	77456922	77456786	Y	E2F7	E2F7	NA	NA	NA	NA	E2F7	438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.499297971904414
chr12	79817704	79817772	79817737	Y	SYT1	NA	NA	NA	NA	NA	PAWR	265105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	79941021	79941361	79941199	Y	PAWR	NA	SYT1,PAWR,PPP1R12A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PAWR	141516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	79943391	79943637	79943513	Y	NA	NA	SYT1,PPP1R12A,PAWR	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PAWR	139240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	80032366	80032529	80032417	Y	NA	NA	NA	NA	NA	NA	PAWR	50348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	80085577	80085980	80085873	Y	NA	PAWR	NA	NA	NA	NA	PAWR	2700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	80219716	80220141	80220058	Y	NA	NA	NA	NA	NA	NA	RP11-84G21.1	106540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	81171843	81172335	81171905	Y	NA	NA	NA	NA	NA	NA	ACSS3	157259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.526416307917731
chr12	82155346	82155393	82155380	Y	NA	NA	NA	NA	NA	NA	CCDC59	595191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	88526600	88526872	88526736	Y	NA	CEP290,TMTC3	NA	NA	NA	NA	CEP290	7121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	88531496	88531830	88531623	Y	NA	CEP290,TMTC3	NA	NA	NA	NA	CEP290	2163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	88968059	88968366	88968242	Y	NA	KITLG	NA	NA	NA	NA	KITLG	4262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	89619217	89620117	89619718	Y	DUSP6,ATP2B1	NA	DUSP6,LOC728084,POC1B	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	DUSP6	124931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	89737833	89738159	89738081	Y	NA	DUSP6	NA	NA	NA	NA	DUSP6	6889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	89747699	89748479	89748073	Y	NA	DUSP6	NA	NA	NA	NA	DUSP6	2651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.480727284520862
chr12	90091098	90091469	90091453	Y	NA	ATP2B1	ATP2B1,LOC338758	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ATP2B1	9608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	92505299	92505700	92505686	Y	NA	RP11-796E2.4,BTG1	NA	NA	NA	NA	RP11-796E2.4	31649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	92897281	92898057	92897626	Y	BTG1,CLLU1	NA	LOC256021	MCF7	ChIA-PET	22265404	BTG1	359608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	92950016	92950145	92950085	Y	NA	NA	LOC256021	IMR90	Hi-C	24141950	EEA1	370962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	93002299	93002373	93002366	Y	NA	NA	LOC256021	IMR90	Hi-C	24141950	EEA1	318734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	93277124	93277496	93277306	Y	NA	EEA1	NA	NA	NA	NA	EEA1	43611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199520374026699
chr12	93320988	93321201	93321103	Y	EEA1	NA	NA	NA	NA	NA	EEA1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	93321551	93321826	93321626	Y	EEA1	EEA1	NA	NA	NA	NA	EEA1	444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	93410863	93410965	93410914	Y	NA	NA	NA	NA	NA	NA	AC138123.2	64486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.417782354512498
chr12	93561648	93561951	93561715	Y	NA	RP11-511B23.2	NA	NA	NA	NA	RP11-511B23.2	45504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	93709037	93709216	93709174	Y	NA	NA	NA	NA	NA	NA	NUDT4	60443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	93767024	93767186	93767090	Y	CRADD,NUDT4	NUDT4	NA	NA	NA	NA	NUDT4	2473	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	93770329	93770575	93770474	Y	NUDT4	NUDT4	NA	NA	NA	NA	NUDT4	670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189989473052387
chr12	93805604	93805748	93805676	Y	CRADD	NUDT4,UBE2N	NA	NA	NA	NA	UBE2N	28290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	93827795	93828172	93827984	Y	NA	UBE2N,MRPL42	NA	NA	NA	NA	UBE2N	5866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	93890331	93890756	93890540	Y	NA	MRPL42	NA	NA	NA	NA	MRPL42	31067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	94135673	94136306	94136137	Y	NUDT4,SOCS2	NA	NA	NA	NA	NA	CRADD	66522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr12	94153192	94153314	94153253	Y	NA	NA	NA	NA	NA	NA	CRADD	84041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	94172136	94172517	94172167	Y	NA	NA	NA	NA	NA	NA	CRADD	102985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	94179016	94179409	94179114	Y	NA	NA	NA	NA	NA	NA	CRADD	109865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	94201755	94201874	94201816	Y	NA	NA	NA	NA	NA	NA	CRADD	132604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	94495978	94496358	94496187	Y	NA	PLXNC1	CRADD,LOC144481,SOCS2,MRPL42,UBE2N	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PLXNC1	44141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr12	94581330	94581746	94581508	Y	TMCC3,PLXNC1	PLXNC1	CCDC41	IMR90	Hi-C	24141950	PLXNC1	40831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr12	94598751	94598891	94598845	Y	TMCC3,PLXNC1	NA	NA	NA	NA	NA	PLXNC1	58252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	94657337	94657688	94657449	Y	PLXNC1,TMCC3	NA	NA	NA	NA	NA	PLXNC1	116838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	94678246	94678308	94678278	Y	PLXNC1,TMCC3	NA	NA	NA	NA	NA	PLXNC1	137747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr12	94696122	94696451	94696433	Y	PLXNC1,TMCC3	NA	NA	NA	NA	NA	RBMS2P1	120294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	94773845	94774167	94774046	Y	PLXNC1,TMCC3	RBMS2P1	NA	NA	NA	NA	RBMS2P1	42578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	94817703	94818348	94818256	Y	NA	RBMS2P1,CCDC41	NA	NA	NA	NA	RBMS2P1	958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	95404686	95404921	95404803	Y	NA	NDUFA12	NA	NA	NA	NA	NDUFA12	9140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	95477787	95477978	95477880	Y	NA	NR2C1	NR2C1	MCF7	ChIA-PET	22265404	NR2C1	12308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	95492031	95492186	95492111	Y	NA	NR2C1	NA	NA	NA	NA	NR2C1	26552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	95609786	95609977	95609896	Y	FGD6	FGD6,VEZT	NA	NA	NA	NA	VEZT	264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	95680646	95681018	95680718	Y	NA	NA	NA	NA	NA	NA	VEZT	71124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.466591030804156
chr12	96592675	96593197	96592888	Y	LTA4H,ELK3	ELK3	NA	NA	NA	NA	ELK3	6515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	96648142	96648594	96648361	Y	ELK3,CDK17	NA	NA	NA	NA	NA	ELK3	61982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	96649758	96650321	96650168	Y	ELK3,CDK17	NA	NA	NA	NA	NA	ELK3	63598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	96659033	96659395	96659303	Y	NA	NA	NA	NA	NA	NA	ELK3	72873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	96685157	96685428	96685293	Y	NA	NA	NA	NA	NA	NA	ELK3	98997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	96752607	96752772	96752695	Y	CDK17	CDK17	NA	NA	NA	NA	CDK17	39566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	96794959	96795305	96795211	Y	CDK17	CDK17	NA	NA	NA	NA	CDK17	2621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	97962496	97962841	97962674	Y	NA	NA	NA	NA	NA	NA	NEDD1	663495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.332975653543046
chr12	98793447	98793582	98793503	Y	NA	RNU4-41P	NA	NA	NA	NA	RNU4-41P	16234	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	99021055	99021169	99021113	Y	NA	SLC25A3,SNORA53,IKBIP,APAF1	NA	NA	NA	NA	IKBIP	15722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	99103586	99103986	99103782	Y	NA	NA	NA	NA	NA	NA	APAF1	66667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr12	101412491	101412895	101412554	Y	NA	NA	NA	NA	NA	NA	UTP20	258992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	102009746	102010171	102009968	Y	MYBPC1	MYBPC1	NA	NA	NA	NA	MYBPC1	49615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.245540414243879
chr12	102283097	102283236	102283152	Y	NA	DRAM1	NA	NA	NA	NA	DRAM1	13968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	102329942	102330412	102330197	Y	DRAM1	NA	NA	NA	NA	NA	DRAM1	60813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	102909608	102909974	102909790	Y	PAH	NA	NA	NA	NA	NA	NUP37	397706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	104199621	104199645	104199634	Y	NA	NT5DC3	NA	NA	NA	NA	NT5DC3	33330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	104252933	104253121	104253026	Y	NA	NT5DC3	NA	NA	NA	NA	NT5DC3	19958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	104658660	104659046	104658853	Y	NA	RPL18AP3,RP11-818F20.5	NA	NA	NA	NA	RPL18AP3	1604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	104671230	104671489	104671317	Y	TXNRD1	RPL18AP3,RP11-818F20.5	NA	NA	NA	NA	RP11-818F20.5	1011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	104693849	104694220	104693862	Y	NA	RPL18AP3,RP11-818F20.5	NA	NA	NA	NA	RP11-818F20.5	21349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	105062941	105063154	105062961	Y	NA	NA	NA	NA	NA	NA	SLC41A2	287368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	105324484	105324678	105324596	Y	CHST11,KIAA1033,SLC41A2	SLC41A2	NA	NA	NA	NA	SLC41A2	25844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	105477471	105477556	105477526	Y	ALDH1L2	ALDH1L2,KIAA1033	NA	NA	NA	NA	ALDH1L2	1116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	105711063	105711549	105711425	Y	C12orf75	NA	C12orf75,APPL2	IMR90	Hi-C	24141950	APPL2	83047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	106529993	106530447	106530148	Y	NA	NUAK1	NA	NA	NA	NA	NUAK1	1364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	106682328	106682503	106682422	Y	NA	TCP11L2,CKAP4	CKAP4,NUAK1,TCP11L2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TCP11L2	11204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	106694592	106694855	106694698	Y	NA	TCP11L2,CKAP4	NA	NA	NA	NA	TCP11L2	885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	107153976	107154194	107154103	Y	RFX4,RIC8B	RIC8B	NA	NA	NA	NA	RIC8B	12179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	107396424	107396642	107396547	Y	NA	C12orf23,MTERFD3	NA	NA	NA	NA	MTERFD3	17480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	107723329	107723653	107723513	Y	NA	BTBD11	NA	NA	NA	NA	BTBD11	13139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	107746150	107746204	107746179	Y	ASCL4,CRY1,BTBD11	BTBD11	NA	NA	NA	NA	BTBD11	35960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.355820165241481
chr12	107856980	107857227	107857220	Y	NA	NA	NA	NA	NA	NA	BTBD11	146790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	108103294	108103307	108103300	Y	PRDM4	PWP1,PRDM4	NA	NA	NA	NA	PWP1	25785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr12	108699402	108699607	108699511	Y	CORO1C,SELPLG	NA	NA	NA	NA	NA	FICD	207355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	108783050	108783376	108783111	Y	NA	NA	WSCD2,CMKLR1	IMR90	Hi-C	24141950	FICD	123586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	109035890	109036155	109035901	Y	NA	NA	NA	NA	NA	NA	ISCU	81532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	109083720	109083964	109083780	Y	SSH1	CORO1C	NA	NA	NA	NA	CORO1C	39408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.523456241160506
chr12	109117977	109118365	109118310	Y	SELPLG,SSH1,CORO1C	CORO1C	NA	NA	NA	NA	CORO1C	5007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	109167575	109167781	109167683	Y	NA	CORO1C	NA	NA	NA	NA	CORO1C	44203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	109209396	109209677	109209591	Y	NA	SSH1,DAO	NA	NA	NA	NA	SSH1	39689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	109232143	109232504	109232328	Y	FICD,SELPLG,CORO1C,SSH1	SSH1,DAO	NA	NA	NA	NA	SSH1	16862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	109248007	109248657	109248411	Y	SELPLG,CORO1C,SSH1	SSH1,DAO	NA	NA	NA	NA	SSH1	709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	109249389	109249909	109249762	Y	CORO1C,SSH1,SSH1	SSH1,DAO	NA	NA	NA	NA	SSH1	23	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr12	109249958	109250678	109250397	Y	NA	SSH1,DAO	NA	NA	NA	NA	DAO	30	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	109553563	109553881	109553768	Y	DAO,ACACB,UNG	ALKBH2,UNG,RP11-968O1.5	NA	NA	NA	NA	RP11-968O1.5	6540	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18332834020178
chr12	109570576	109570747	109570637	Y	ACACB	ALKBH2,UNG,RP11-968O1.5	NA	NA	NA	NA	RP11-968O1.5	23553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	109899131	109899209	109899162	Y	TRPV4,TRPV4,TRPV4	UBE3B,KCTD10	NA	NA	NA	NA	UBE3B	13998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	109900309	109900503	109900403	Y	KCTD10	UBE3B,KCTD10	NA	NA	NA	NA	UBE3B	12704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	109900993	109901418	109901152	Y	KCTD10	UBE3B,KCTD10	NA	NA	NA	NA	UBE3B	11789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr12	110315812	110316035	110315886	Y	C12orf34,TCHP,TCHP	TRPV4,GLTP,TCHP	NA	NA	NA	NA	GLTP	258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	110517549	110517856	110517740	Y	GIT2,RAD9B,C12orf76	C12orf76,IFT81	C12orf76	K562	ChIA-PET	22265404	C12orf76	8058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434707244303682
chr12	110540205	110540443	110540322	Y	NA	C12orf76,IFT81	ANKRD13A,C12orf76,IFT81,ATP2A2,ANAPC7,ARPC3,GPN3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	IFT81	19697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	110633503	110633688	110633596	Y	NA	NA	NA	NA	NA	NA	IFT81	73363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	110682622	110683080	110682796	Y	ATP2A2	ATP2A2	ATP2A2	MCF7	ChIA-PET	22265404	ATP2A2	33481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	110687741	110688014	110687886	Y	TRPV4,ATP2A2	ATP2A2	ATP2A2,C12orf76,IFT81,ANAPC7,ANKRD13A,GIT2,ARPC3	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ATP2A2	28547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	110694570	110694771	110694670	Y	PPTC7,ARPC3	ATP2A2	ATP2A2,IFT81,ANKRD13A,GIT2,C12orf76,ANAPC7,ARPC3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ATP2A2	21790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	110707461	110707714	110707625	Y	NA	ATP2A2	ANKRD13A,ATP2A2,C12orf76,GIT2,IFT81	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ATP2A2	8847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	110735237	110735389	110735298	Y	NA	ATP2A2	NA	NA	NA	NA	ATP2A2	18676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	110750652	110751139	110750939	Y	NA	ATP2A2	NA	NA	NA	NA	ATP2A2	34091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	110931784	110931990	110931887	Y	NA	ARPC3,RPL31P49,GPN3,VPS29	NA	NA	NA	NA	VPS29	5932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	111015565	111016027	111015682	Y	PPTC7,ARPC3	PPTC7,TCTN1	NA	NA	NA	NA	PPTC7	3098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	111016111	111016444	111016311	Y	PPTC7,ARPC3	PPTC7,TCTN1	NA	NA	NA	NA	PPTC7	2681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	111019873	111020249	111019900	Y	MYL2,ATP2A2,PPTC7	PPTC7,TCTN1	RAD9B	IMR90	Hi-C	24141950	PPTC7	748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr12	111028698	111029042	111028796	Y	ARPC3,PPTC7,HVCN1	PPTC7,TCTN1	PPTC7,GPN3,FAM216A,VPS29,RAD9B,PPP1CC,TCTN1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPTC7	9573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr12	111842634	111842962	111842759	Y	NA	FAM109A,SH2B3	NA	NA	NA	NA	SH2B3	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.89891147817932
chr12	111867956	111868269	111868101	Y	BRAP,SH2B3	SH2B3	NA	NA	NA	NA	SH2B3	26204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr12	111875686	111876044	111875771	Y	BRAP,SH2B3	SH2B3	NA	NA	NA	NA	SH2B3	33934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	111883923	111883990	111883957	Y	NA	SH2B3	NA	NA	NA	NA	SH2B3	42171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	111904763	111905142	111904953	Y	ALDH2,ATXN2	NA	NA	NA	NA	NA	SH2B3	63011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	112018937	112019235	112019073	Y	NA	ATXN2	NA	NA	NA	NA	ATXN2	16245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr12	112215177	112215502	112215206	Y	FAM109A,SH2B3,ALDH2	ALDH2	NA	NA	NA	NA	ALDH2	12486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	112341708	112342051	112341878	Y	ATXN2,BRAP,MAPKAPK5,NAA25,C12orf51,TMEM116	NA	NA	NA	NA	NA	MAPKAPK5	63926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	112464061	112464211	112464136	Y	NA	TMEM116,ERP29	NA	NA	NA	NA	ERP29	14941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	112529504	112529724	112529616	Y	NA	NAA25,TRAFD1	NA	NA	NA	NA	NAA25	15102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr12	112545862	112545946	112545885	Y	NA	NAA25,TRAFD1	NA	NA	NA	NA	NAA25	1036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	112554455	112554606	112554536	Y	ALDH2,TRAFD1	NAA25,TRAFD1	TRAFD1,NAA25	MCF7,K562	ChIA-PET	22265404	TRAFD1	6699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	112741741	112742068	112741904	Y	NA	NA	NA	NA	NA	NA	PTPN11	112087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	112759768	112760224	112759930	Y	NA	NA	NA	NA	NA	NA	PTPN11	93931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr12	112809864	112809925	112809895	Y	C12orf51	PTPN11,RPL6	NA	NA	NA	NA	PTPN11	44230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	112920682	112921011	112920993	Y	NA	NA	NA	NA	NA	NA	RPL6	66040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	113037686	113038081	113037930	Y	OAS3,OAS2,OAS1	NA	NA	NA	NA	NA	RPL6	183044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	113417741	113417850	113417751	Y	NA	OAS3,OAS2	NA	NA	NA	NA	OAS2	3541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	113630509	113630869	113630677	Y	NA	DDX54,TPCN1,IQCD	NA	NA	NA	NA	DDX54	9225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	113644189	113644365	113644286	Y	NA	DDX54,TPCN1,IQCD	NA	NA	NA	NA	TPCN1	12490	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.07699139669875
chr12	113660919	113661318	113661188	Y	TPCN1	DDX54,TPCN1,IQCD	NA	NA	NA	NA	IQCD	4020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.368802247538092
chr12	113667617	113667862	113667654	Y	DTX1,IQCD,TPCN1	DDX54,TPCN1,IQCD	NA	NA	NA	NA	IQCD	10718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	113684297	113684702	113684391	Y	NA	TPCN1,IQCD	NA	NA	NA	NA	IQCD	27398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	113709766	113709965	113709824	Y	OAS1,OAS3,OAS2,SLC24A6,SDSL,SDS,PLBD2	NA	NA	NA	NA	NA	IQCD	52867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr12	113855961	113856499	113856241	Y	OAS3,OAS2,SLC24A6,SDS,SDSL	SDSL	SDS	IMR90	Hi-C	24141950	SDSL	1543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	114200256	114200532	114200390	Y	NA	RP11-438N16.1	NA	NA	NA	NA	RP11-438N16.1	8956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	115103963	115104215	115104201	Y	TBX3	TBX3	NA	NA	NA	NA	TBX3	15754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	115105863	115106455	115106375	Y	TBX3	TBX3	NA	NA	NA	NA	TBX3	13514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.873688312922246
chr12	115107232	115107509	115107392	Y	TBX3	TBX3	NA	NA	NA	NA	TBX3	12460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	115124772	115125182	115125089	Y	TBX3	TBX3	NA	NA	NA	NA	TBX3	4803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	115889491	115890073	115889778	Y	NA	NA	TBX3	IMR90	Hi-C	24141950	TBX3	769522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr12	116044058	116044374	116044216	Y	NA	NA	NA	NA	NA	NA	MED13L	668769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	116530359	116530538	116530483	Y	NA	NA	NA	NA	NA	NA	MED13L	182605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	116570796	116571229	116571121	Y	MED13L,MAP1LC3B2	NA	NA	NA	NA	NA	MED13L	141914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	116602727	116603094	116602910	Y	MED13L	NA	NA	NA	NA	NA	MED13L	110049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	116796896	116797249	116796984	Y	NA	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MED13L	83753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	117039794	117039983	117039914	Y	MED13L,MAP1LC3B2	NA	MED13L,MIR4472-2,LINC00173,MAP1LC3B2	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-497G19.1	57404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	117100450	117100717	117100699	Y	NA	RP11-497G19.1	MED13L,LINC00173,C12orf49	IMR90	Hi-C	24141950	RP11-497G19.1	3063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.220558990388003
chr12	117173952	117174265	117174216	Y	MED13L,MAP1LC3B2	C12orf49	NA	NA	NA	NA	RNFT2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr12	117478325	117478369	117478352	Y	NA	NA	NA	NA	NA	NA	TESC	56915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	117483062	117483484	117483386	Y	NA	NA	NA	NA	NA	NA	TESC	51800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.677619120217846
chr12	118466445	118466738	118466629	Y	NA	RFC5,WSB2	NA	NA	NA	NA	RFC5	17052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	118795182	118795561	118795499	Y	TAOK3	TAOK3,SUDS3	NA	NA	NA	NA	TAOK3	13189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	118815733	118815925	118815736	Y	TAOK3	TAOK3,SUDS3	NA	NA	NA	NA	SUDS3	3548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	119632995	119633391	119633197	Y	TMEM233	HSPB8	NA	NA	NA	NA	HSPB8	18548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	120239357	120239612	120239538	Y	NA	NA	NA	NA	NA	NA	CIT	73483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	120426531	120426889	120426594	Y	NA	NA	NA	NA	NA	NA	CIT	113436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	120639993	120640274	120640078	Y	NA	GCN1L1,RPLP0,PXN-AS1	NA	NA	NA	NA	PXN-AS1	2899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.424684717157096
chr12	120665661	120665757	120665705	Y	ACADS	GCN1L1,RPLP0,PXN-AS1,PXN	NA	NA	NA	NA	PXN-AS1	28567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.642775266960146
chr12	120666780	120666906	120666823	Y	NA	GCN1L1,RPLP0,PXN-AS1,PXN	NA	NA	NA	NA	PXN-AS1	29686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	120668258	120668871	120668569	Y	RAB35,DYNLL1,GCN1L1,RPLP0,PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN-AS1	31164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr12	120672500	120673016	120672699	Y	PXN	GCN1L1,RPLP0,PXN-AS1,PXN,NME2P1	NA	NA	NA	NA	PXN	28558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	120906143	120906276	120906236	Y	RAB35	COX6A1,TRIAP1,GATC,SRSF9,DYNLL1	NA	NA	NA	NA	DYNLL1	490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr12	120956227	120956384	120956265	Y	COQ5	RNF10,COQ5	NA	NA	NA	NA	RNF10	12899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	120967554	120967708	120967668	Y	NA	RNF10,COQ5,POP5	NA	NA	NA	NA	RNF10	1575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	120976448	120976663	120976550	Y	PXN,RNF10	RNF10,COQ5,POP5	NA	NA	NA	NA	COQ5	6211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	121179921	121180187	121180096	Y	NA	UNC119B,ACADS	NA	NA	NA	NA	ACADS	18383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189989473052387
chr12	121282265	121283301	121283112	Y	NA	NA	NA	NA	NA	NA	SPPL3	56873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr12	121322345	121322363	121322358	Y	NA	SPPL3,RPL12P33	NA	NA	NA	NA	SPPL3	17811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	121367131	121367281	121367257	Y	NA	SPPL3,RPL12P33,HNF1A,HNF1A-AS1	C12orf43,SPPL3,POP5	IMR90	Hi-C	24141950	RPL12P33	14583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr12	121402785	121402795	121402791	Y	HNF1A	HNF1A,HNF1A-AS1,C12orf43	NA	NA	NA	NA	HNF1A	11551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	121425440	121425755	121425495	Y	NA	HNF1A,HNF1A-AS1,C12orf43,OASL	NA	NA	NA	NA	HNF1A-AS1	8672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.846409879164167
chr12	121498035	121498283	121498257	Y	P2RX4,CAMKK2,P2RX7,OASL	C12orf43,OASL	SPPL3,C12orf43,LOC100506668,DYNLL1,MLEC,HNF1A,P2RX7,P2RX4,CAMKK2,RNF10,POP5,CABP1,UNC119B,ACADS,HNF1A-AS1	IMR90	Hi-C	24141950	OASL	22990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	121566211	121566268	121566242	Y	P2RX4,CAMKK2,P2RX7	P2RX7	P2RX4,P2RX7	MCF7,K562	ChIA-PET	22265404	P2RX7	2354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	121838748	121839039	121838846	Y	SETD1B,RHOF,ORAI1,KDM2B,RNF34	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	2904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr12	121839154	121839422	121839290	Y	C12orf43,RHOF,KDM2B,RNF34	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	3310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	121841505	121841570	121841538	Y	NA	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	5661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	121864200	121864449	121864234	Y	NA	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	28356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	121866033	121866226	121866130	Y	NA	ANAPC5,RNF34	NA	NA	NA	NA	RNF34	30189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	121888305	121888670	121888535	Y	NA	NA	NA	NA	NA	NA	RNF34	52461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	121951651	121951880	121951735	Y	NA	NA	NA	NA	NA	NA	RP13-941N14.1	64817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	121976471	121976819	121976719	Y	NA	RP13-941N14.1,KDM2B	NA	NA	NA	NA	RP13-941N14.1	39878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr12	122020162	122020238	122020212	Y	RNF34,SETD1B,ORAI1,KDM2B,KDM2B	RP13-941N14.1,KDM2B,ORAI1	NA	NA	NA	NA	KDM2B	3242	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.54983306623047
chr12	122020670	122020879	122020764	Y	KDM2B,KDM2B	RP13-941N14.1,KDM2B,ORAI1	NA	NA	NA	NA	KDM2B	3750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	122028609	122028883	122028798	Y	RNF34,KDM2B,SETD1B,RHOF,ORAI1	RP13-941N14.1,KDM2B,ORAI1	KDM2B	K562	ChIA-PET	22265404	KDM2B	11689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr12	122067749	122067897	122067832	Y	ORAI1	ORAI1	NA	NA	NA	NA	ORAI1	5294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	122124782	122125118	122124936	Y	P2RX4,CAMKK2,WDR66,WDR66,HPD,MORN3	TMEM120B	MORN3,LOC338799,SETD1B	K562,MCF7	ChIA-PET	22265404	TMEM120B	23540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr12	122186812	122187117	122186965	Y	NA	TMEM120B	NA	NA	NA	NA	TMEM120B	38154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	122225058	122225273	122225168	Y	KDM2B,ORAI1,MLXIP,SETD1B,RHOF	RHOF,AC084018.1,SETD1B	NA	NA	NA	NA	RHOF	14036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	122227826	122228273	122227974	Y	CAMKK2,KDM2B,ORAI1,MLXIP,SETD1B,RHOF	RHOF,AC084018.1,SETD1B	NA	NA	NA	NA	RHOF	11036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	122229588	122230472	122229850	Y	KDM2B,ORAI1,MLXIP,SETD1B,RHOF	RHOF,AC084018.1,SETD1B	NA	NA	NA	NA	RHOF	8837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr12	122462187	122462386	122462358	Y	BCL7A	BCL7A,AC156455.1	NA	NA	NA	NA	BCL7A	6859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	122519763	122520228	122519936	Y	ZCCHC8,RSRC2,ORAI1,SETD1B,MLXIP	AC156455.1,MLXIP	NA	NA	NA	NA	MLXIP	5135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	122908043	122908483	122908329	Y	ZCCHC8,DENR,CLIP1	CLIP1	NA	NA	NA	NA	CLIP1	2864	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.85625232065092
chr12	123216800	123217069	123216944	Y	CLIP1,HCAR2,HCAR3,VPS37B	HCAR2,HCAR3,HCAR1,DENR	NA	NA	NA	NA	HCAR1	3410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	123320749	123321200	123320858	Y	NA	HIP1R	NA	NA	NA	NA	HIP1R	3749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr12	123362987	123363145	123363088	Y	NA	HIP1R,VPS37B	NA	NA	NA	NA	VPS37B	15846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	123625857	123625976	123625910	Y	C12orf65,C12orf65,C12orf65	PITPNM2	NA	NA	NA	NA	PITPNM2	6586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	123627472	123627989	123627683	Y	C12orf65,C12orf65,C12orf65	PITPNM2	NA	NA	NA	NA	PITPNM2	4573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	124486134	124486345	124486231	Y	NA	ZNF664,CCDC92	NA	NA	NA	NA	CCDC92	30756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	124823049	124823325	124823212	Y	FAM101A	NA	NA	NA	NA	NA	NCOR2	226810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr12	124907545	124908050	124907792	Y	NA	NA	NA	NA	NA	NA	NCOR2	142085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.687481549619669
chr12	124916261	124916578	124916546	Y	NA	NA	NA	NA	NA	NA	NCOR2	133557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	124942584	124942823	124942638	Y	UBC,NCOR2	NA	NA	NA	NA	NA	NCOR2	107312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	124951666	124951729	124951686	Y	NA	NA	NA	NA	NA	NA	NCOR2	98406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	125003619	125003834	125003727	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	46301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	125026162	125026505	125026332	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	23630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	125028947	125029179	125029054	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	20956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	125050856	125051375	125051213	Y	UBC,NCOR2	NCOR2	NA	NA	NA	NA	NCOR2	721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21102808941369
chr12	125052829	125053041	125052928	Y	NA	NCOR2	NA	NA	NA	NA	NCOR2	2694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	125165952	125166242	125166057	Y	UBC,NCOR2	NA	NCOR2,ZNF664-FAM101A,SCARB1	IMR90	Hi-C	24141950	NCOR2	115817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr12	125221717	125221873	125221796	Y	NCOR2,UBC	NA	NCOR2	IMR90	Hi-C	24141950	SCARB1	143341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	125229298	125229517	125229417	Y	NA	NA	NCOR2	IMR90	Hi-C	24141950	SCARB1	135697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	125230587	125231048	125230629	Y	NCOR2,UBC	NA	NCOR2	IMR90	Hi-C	24141950	SCARB1	134166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	125288540	125288810	125288726	Y	NA	NA	NA	NA	NA	NA	SCARB1	76404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr12	125331273	125331577	125331425	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	33637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr12	125332280	125332520	125332389	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	32694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	125346086	125346324	125346188	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	18890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	125347630	125347766	125347649	Y	NA	SCARB1	NA	NA	NA	NA	SCARB1	17448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	125369233	125369624	125369429	Y	NA	SCARB1,UBC,RPL22P19	UBC	K562	ChIA-PET	22265404	SCARB1	4019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	125389117	125389584	125389422	Y	NCOR2,UBC	SCARB1,UBC,RPL22P19	NA	NA	NA	NA	UBC	10330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	125400956	125401141	125401046	Y	UBC	SCARB1,UBC,RPL22P19	NA	NA	NA	NA	UBC	1042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr12	125403508	125403991	125403767	Y	UBC	SCARB1,UBC,RPL22P19	NCOR2,SCARB1,UBC	IMR90	Hi-C	24141950	UBC	3594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	125405622	125405939	125405923	Y	UBC	SCARB1,UBC,RPL22P19	NCOR2,SCARB1,UBC	IMR90	Hi-C	24141950	UBC	5708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	125423202	125423335	125423285	Y	NA	UBC,RPL22P19,DHX37	UBC	IMR90	Hi-C	24141950	RPL22P19	4761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr12	125424077	125424667	125424516	Y	NA	UBC,RPL22P19,DHX37	UBC	IMR90	Hi-C	24141950	RPL22P19	5636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr12	125425237	125425455	125425374	Y	NA	UBC,RPL22P19,DHX37	UBC	IMR90	Hi-C	24141950	RPL22P19	6796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr12	125550830	125551017	125550923	Y	NA	AACS	NA	NA	NA	NA	AACS	2905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr12	125565000	125565015	125565008	Y	AACS	AACS	NA	NA	NA	NA	AACS	17075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	125577703	125578001	125577737	Y	NA	AACS	NA	NA	NA	NA	AACS	29778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr12	127567979	127568114	127568034	Y	NA	NA	NA	NA	NA	NA	AC079949.1	80558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	128823822	128824230	128823901	Y	NA	NA	NA	NA	NA	NA	SLC15A4	482298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr12	129291762	129292181	129291876	Y	NA	SLC15A4,GLT1D1	NA	NA	NA	NA	SLC15A4	14347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	129306542	129307039	129306920	Y	SLC15A4,GLT1D1	SLC15A4,GLT1D1	NA	NA	NA	NA	SLC15A4	14	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	131261153	131261348	131261240	Y	NA	NA	NA	NA	NA	NA	STX2	60463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.73530748517398
chr12	132232542	132232780	132232661	Y	DDX51	SFSWAP	NA	NA	NA	NA	SFSWAP	38916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr12	132265042	132265050	132265046	Y	NA	MMP17	NA	NA	NA	NA	MMP17	45888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	132345340	132345736	132345589	Y	SFSWAP,ULK1	MMP17,ULK1	NA	NA	NA	NA	ULK1	31460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.547946550451309
chr12	132349078	132349283	132349182	Y	NA	MMP17,ULK1	NA	NA	NA	NA	ULK1	27913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	132558778	132559145	132558825	Y	NA	SNORA49,EP400NL	NA	NA	NA	NA	EP400NL	7683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr12	132903795	132904258	132904060	Y	GALNT9	NA	NA	NA	NA	NA	FBRSL1	159879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr12	133178906	133179327	133179219	Y	NA	NA	NA	NA	NA	NA	POLE	82624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr12	133528012	133528357	133528019	Y	NA	CHFR,ZNF605	NA	NA	NA	NA	CHFR	2533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr12	133688468	133688629	133688567	Y	NA	ZNF140,ZNF891,ZNF10,ZNF268	NA	NA	NA	NA	ZNF891	16430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	20137811	20138146	20137910	Y	NA	NA	NA	NA	NA	NA	MPHOSPH8	67642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	20271500	20271544	20271543	Y	NA	NA	NA	NA	NA	NA	MPHOSPH8	65712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	20555489	20555876	20555683	Y	NA	ZMYM2	NA	NA	NA	NA	ZMYM2	24679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	20624080	20624132	20624092	Y	NA	NA	NA	NA	NA	NA	ZMYM2	93270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	20644269	20644474	20644387	Y	ZMYM2,ZMYM2,ZMYM2	NA	NA	NA	NA	NA	ZMYM2	113459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr13	20694627	20695029	20694906	Y	PSPC1,ZMYM5	NA	NA	NA	NA	NA	GJB2	70008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr13	20701926	20702100	20701958	Y	PSPC1,ZMYM5	NA	NA	NA	NA	NA	GJB2	62937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr13	20986336	20986694	20986525	Y	GJB2,GJB6	NA	NA	NA	NA	NA	CRYL1	111302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	21127500	21127725	21127613	Y	CRYL1,IL17D	CRYL1,IFT88	CRYL1,IFT88,IL17D,N6AMT2	IMR90	Hi-C	24141950	IFT88	10860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr13	21241518	21241702	21241584	Y	NA	IL17D	NA	NA	NA	NA	IL17D	32564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	21398890	21399124	21398998	Y	NA	NA	NA	NA	NA	NA	N6AMT2	52793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	21400254	21400509	21400379	Y	NA	NA	NA	NA	NA	NA	N6AMT2	54157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	21607254	21607660	21607524	Y	NA	RNU4-9P,LATS2	NA	NA	NA	NA	RNU4-9P	3146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	21748962	21749145	21749040	Y	NA	SAP18,SKA3,MRP63	NA	NA	NA	NA	MRP63	178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	22107257	22107449	22107379	Y	NA	NA	NA	NA	NA	NA	ZDHHC20	75748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	22111458	22111566	22111512	Y	NA	NA	NA	NA	NA	NA	ZDHHC20	79949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	22135396	22135683	22135678	Y	EFHA1	NA	NA	NA	NA	NA	RPS7P10	65471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr13	23973487	23973793	23973652	Y	NA	SACS	NA	NA	NA	NA	SACS	32048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	24131522	24131823	24131734	Y	SACS	TNFRSF19	MIPEP,TNFRSF19	IMR90	Hi-C	24141950	TNFRSF19	10686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr13	24133122	24133556	24133337	Y	NA	TNFRSF19	MIPEP,TNFRSF19	IMR90	Hi-C	24141950	TNFRSF19	8953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.660363213606351
chr13	24148254	24148621	24148289	Y	SGCG,TNFRSF19	TNFRSF19	NA	NA	NA	NA	TNFRSF19	5745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169773499683666
chr13	24289001	24289462	24289192	Y	PCOTH	NA	NA	NA	NA	NA	TNFRSF19	146492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.920199979311699
chr13	24290088	24290194	24290124	Y	NA	NA	NA	NA	NA	NA	TNFRSF19	147579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr13	24528296	24528692	24528455	Y	PCOTH	SPATA13	SPATA13,TNFRSF19	IMR90	Hi-C	24141950	SPATA13	23252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	24697003	24697328	24697264	Y	NA	NA	SPATA13	IMR90	Hi-C	24141950	SPATA13	145059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr13	24722927	24723324	24723037	Y	NA	NA	SPATA13	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SPATA13	170983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	25856268	25856641	25856378	Y	NA	MTMR6,NUPL1	NA	NA	NA	NA	MTMR6	3506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	25859422	25859518	25859470	Y	NUPL1,MTMR6	MTMR6,NUPL1	NA	NA	NA	NA	MTMR6	629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	25886402	25886789	25886419	Y	NA	MTMR6,NUPL1	NA	NA	NA	NA	NUPL1	12740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	26760531	26760858	26760712	Y	WASF3	RNF6	WASF3,RNF6	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RNF6	33933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr13	27142181	27142413	27142195	Y	NA	WASF3	NA	NA	NA	NA	WASF3	12341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	27166168	27166184	27166175	Y	GPR12,WASF3	WASF3	NA	NA	NA	NA	WASF3	36328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	27198783	27198789	27198786	Y	NA	NA	NA	NA	NA	NA	WASF3	68943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	27557231	27557465	27557334	Y	USP12,RPL21,RASL11A	NA	RASL11A,USP12,RPL21,MTIF3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP12	186568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.291229437640749
chr13	27957593	27957812	27957644	Y	RASL11A,GTF3A	GTF3A	CDX2,GSX1	IMR90	Hi-C	24141950	GTF3A	38869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189497846880113
chr13	28006253	28006341	28006297	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	GTF3A	9572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr13	28010544	28010826	28010685	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	MTIF3	11913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	28025291	28025563	28025486	Y	NA	GTF3A,MTIF3	NA	NA	NA	NA	MTIF3	2552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr13	28167075	28167372	28167253	Y	NA	LNX2,POLR1D	NA	NA	NA	NA	LNX2	25169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	28534904	28535178	28535096	Y	LNX2,FLT3,PRHOXNB	PDX1	NA	NA	NA	NA	PDX1	42747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320153668991197
chr13	28787263	28787277	28787270	Y	NA	EEF1A1P3	NA	NA	NA	NA	EEF1A1P3	613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	29291126	29291443	29291386	Y	SLC46A3	NA	NA	NA	NA	NA	POMP	59885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	30407984	30408178	30408116	Y	UBL3	UBL3	NA	NA	NA	NA	UBL3	14643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	30812389	30812594	30812492	Y	NA	NA	NA	NA	NA	NA	PRDX2P1	55690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	30879792	30879814	30879803	Y	NA	PRDX2P1,KATNAL1	NA	NA	NA	NA	KATNAL1	171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	30968898	30969238	30968927	Y	NA	UBE2L5P	LINC00426,KATNAL1,USPL1,HMGB1,UBL3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UBE2L5P	30846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	30969684	30969817	30969776	Y	USPL1	UBE2L5P	LINC00426,KATNAL1,USPL1,UBL3,HMGB1	IMR90	Hi-C	24141950	UBE2L5P	30267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr13	30982567	30982782	30982669	Y	NA	UBE2L5P	KATNAL1,LINC00426,USPL1,UBL3,HMGB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UBE2L5P	17302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr13	31151476	31151709	31151594	Y	C13orf26,USPL1	HMGB1,USPL1	TEX26-AS1,LINC00426,HMGB1	IMR90	Hi-C	24141950	HMGB1	38025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	31407198	31407336	31407268	Y	HSPH1	NA	USPL1	IMR90	Hi-C	24141950	USPL1	217368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr13	31583300	31583599	31583486	Y	NA	NA	USPL1,C13orf33,TEX26-AS1,KATNAL1,TEX26,ALOX5AP	IMR90	Hi-C	24141950	HSPH1	150926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	31775014	31775311	31775185	Y	HSPH1	HSPH1,B3GALTL	NA	NA	NA	NA	B3GALTL	2941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	32501315	32501650	32501483	Y	NA	NA	NA	NA	NA	NA	FRY	101787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr13	32620673	32620873	32620777	Y	N4BP2L2,N4BP2L2,N4BP2L1,BRCA2,FRY	FRY	NA	NA	NA	NA	FRY	17236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr13	32625512	32625609	32625561	Y	NA	FRY	NA	NA	NA	NA	FRY	22075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr13	32687742	32687974	32687911	Y	N4BP2L2,N4BP2L2	NA	NA	NA	NA	NA	FRY	84305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	32956405	32956487	32956432	Y	NA	N4BP2L1	NA	NA	NA	NA	N4BP2L1	43828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	33051019	33051050	33051035	Y	NA	NA	NA	NA	NA	NA	N4BP2L1	50704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	33698210	33698586	33698501	Y	NA	NA	NA	NA	NA	NA	STARD13	224181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	33733192	33733538	33733525	Y	NA	NA	NA	NA	NA	NA	STARD13	189229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	33762622	33762899	33762709	Y	STARD13,STARD13	NA	NA	NA	NA	NA	STARD13	159868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	33769448	33769840	33769616	Y	STARD13	NA	NA	NA	NA	NA	STARD13	152927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	33822427	33822802	33822649	Y	NA	NA	NA	NA	NA	NA	STARD13	99965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	33841256	33841381	33841376	Y	NA	NA	NA	NA	NA	NA	STARD13	81386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	34069113	34069239	34069161	Y	NA	NA	NA	NA	NA	NA	STARD13	146346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	34116442	34117241	34116673	Y	NA	NA	NA	NA	NA	NA	STARD13	193675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.84690099372924
chr13	34186963	34187337	34187175	Y	NA	NA	NA	NA	NA	NA	RFC3	202849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	34216569	34217156	34216982	Y	NA	NA	NA	NA	NA	NA	RFC3	173030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.904749456430135
chr13	34217614	34217741	34217660	Y	NA	NA	NA	NA	NA	NA	RFC3	172445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr13	34253090	34253722	34253494	Y	NA	NA	NA	NA	NA	NA	RFC3	136464	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.80390114118905
chr13	34731212	34731445	34731362	Y	NA	NA	NA	NA	NA	NA	RFC3	341026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	35923856	35924125	35924012	Y	NBEA	NA	NA	NA	NA	NA	NBEA	409432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr13	36054193	36054594	36054324	Y	NA	NA	NA	NA	NA	NA	NBEA	539769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	36630888	36631287	36631099	Y	DCLK1	NA	NA	NA	NA	NA	CCDC169	238690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr13	36918283	36918673	36918579	Y	NA	CCDC169,CCDC169-SOHLH2,SOHLH2,SPG20	NA	NA	NA	NA	SPG20	23644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	37473939	37474133	37474036	Y	C13orf36,SMAD9	SMAD9,LAMTOR3P1	NA	NA	NA	NA	SMAD9	18769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	37493371	37493714	37493499	Y	C13orf36,RFXAP,SMAD9	SMAD9,LAMTOR3P1	NA	NA	NA	NA	SMAD9	469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr13	38491234	38491367	38491301	Y	NA	NA	NA	NA	NA	NA	POSTN	320253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	38874589	38874762	38874676	Y	NA	UFM1	NA	NA	NA	NA	UFM1	47224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	40272314	40272449	40272352	Y	NA	COG6	NA	NA	NA	NA	COG6	44550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	40331110	40331478	40331245	Y	NA	NA	NA	NA	NA	NA	COG6	103346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	40690248	40690533	40690364	Y	NA	NA	FOXO1	IMR90	Hi-C	24141950	RP11-172E9.2	231907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	40920242	40920422	40920332	Y	NA	RP11-172E9.2	NA	NA	NA	NA	RP11-172E9.2	2018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr13	41078224	41078580	41078410	Y	NA	NA	FOXO1,TTL	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-172E9.2	155784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.287286630146177
chr13	41173351	41173594	41173358	Y	NA	NA	NA	NA	NA	NA	FOXO1	65140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	41226066	41226446	41226348	Y	NA	FOXO1	NA	NA	NA	NA	FOXO1	12288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr13	41229483	41229797	41229615	Y	NA	FOXO1	NA	NA	NA	NA	FOXO1	8937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	41558714	41559024	41558959	Y	C13orf15,FOXO1,NAA16,ELF1,ELF1	NA	NA	NA	NA	NA	SUGT1P3	64804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	41574237	41574406	41574394	Y	FOXO1,NAA16,ELF1,ELF1	NA	NA	NA	NA	NA	WBP4	59004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	41581586	41581700	41581679	Y	NA	NA	NA	NA	NA	NA	WBP4	51710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	41589057	41589218	41589148	Y	NA	WBP4,ELF1	NA	NA	NA	NA	WBP4	44192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	41591294	41591779	41591504	Y	C13orf15,NAA16,ELF1,ELF1	WBP4,ELF1	NA	NA	NA	NA	WBP4	41631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	41624170	41624528	41624466	Y	C13orf15,NAA16,ELF1,ELF1	WBP4,ELF1	ELF1,MTRF1,NAA16	IMR90	Hi-C	24141950	WBP4	8882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	41651625	41651882	41651685	Y	NA	WBP4,ELF1	NA	NA	NA	NA	ELF1	18049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	41811647	41811915	41811781	Y	NA	KBTBD7,MTRF1	NA	NA	NA	NA	MTRF1	23827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	41825625	41825697	41825634	Y	KBTBD7,NAA16	MTRF1	NA	NA	NA	NA	MTRF1	10045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	42121895	42122099	42121973	Y	NA	NA	NA	NA	NA	NA	NAA16	238554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	42162855	42163294	42163201	Y	C13orf15,DGKH	NA	NA	NA	NA	NA	NAA16	279514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	42188044	42188379	42188211	Y	NA	NA	NA	NA	NA	NA	NAA16	304703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	42219317	42219744	42219583	Y	NAA16,C13orf15	NA	NA	NA	NA	NA	NAA16	335976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	42222511	42222753	42222632	Y	NA	NA	NA	NA	NA	NA	NAA16	339170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr13	42397573	42397928	42397750	Y	NA	NA	NA	NA	NA	NA	DGKH	214248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	42509903	42509914	42509909	Y	NA	NA	NA	NA	NA	NA	DGKH	102262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	42646001	42646399	42646206	Y	NA	DGKH	NA	NA	NA	NA	DGKH	33825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr13	42855017	42855240	42855076	Y	AKAP11	AKAP11	NA	NA	NA	NA	AKAP11	10728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	43617981	43618110	43618046	Y	TNFSF11	DNAJC15	NA	NA	NA	NA	DNAJC15	22642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	43629039	43630063	43629103	Y	NA	DNAJC15	NA	NA	NA	NA	DNAJC15	33700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	43632661	43632965	43632672	Y	NA	DNAJC15	NA	NA	NA	NA	DNAJC15	37322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr13	43656094	43656342	43656191	Y	NA	NA	NA	NA	NA	NA	DNAJC15	60755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	43662550	43662935	43662749	Y	EPSTI1	NA	NA	NA	NA	NA	DNAJC15	67211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	43796435	43796650	43796543	Y	NA	NA	NA	NA	NA	NA	DNAJC15	201096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	44446151	44446617	44446342	Y	NA	LACC1,CCDC122	NA	NA	NA	NA	LACC1	4803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	44542732	44543742	44543446	Y	SERP2	DGKZP1	SERP2	IMR90	Hi-C	24141950	DGKZP1	2172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr13	44884974	44885381	44885134	Y	CCDC122,TSC22D1	NA	TSC22D1,LACC1,SERP2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TSC22D1	263902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	44978399	44978598	44978577	Y	NA	NA	NA	NA	NA	NA	TSC22D1	170685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.983636535492335
chr13	45242810	45243164	45242965	Y	NA	NA	TSC22D1,NUFIP1,TSC22D1-AS1,LINC00330	IMR90	Hi-C	24141950	TSC22D1	93527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	45333095	45333256	45333140	Y	NA	NA	TSC22D1,TSC22D1-AS1,NUFIP1	IMR90	Hi-C	24141950	TSC22D1	183812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	45338378	45338728	45338554	Y	NA	NA	TSC22D1,TSC22D1-AS1,NUFIP1,LINC00330	IMR90	Hi-C	24141950	TSC22D1	189095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	45492137	45492940	45492235	Y	TSC22D1	NA	NA	NA	NA	NA	NUFIP1	68678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr13	45496701	45496835	45496770	Y	NA	NA	NA	NA	NA	NA	NUFIP1	64783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	45745052	45745233	45745142	Y	NA	NA	NA	NA	NA	NA	GTF2F2	52402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr13	45928010	45928281	45928087	Y	NA	TPT1-AS1,TPT1	NA	NA	NA	NA	TPT1	14505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr13	46082201	46082375	46082214	Y	NA	COG3	NA	NA	NA	NA	COG3	45141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	46095529	46095772	46095647	Y	TPT1	NA	NA	NA	NA	NA	COG3	58469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	46557145	46557532	46557508	Y	NA	NA	NA	NA	NA	NA	ZC3H13	67362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	46676671	46676746	46676711	Y	CPB2	CPB2	NA	NA	NA	NA	CPB2	465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.496669433574699
chr13	46709325	46709604	46709495	Y	NA	CPB2	NA	NA	NA	NA	CPB2	32114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr13	46724053	46724328	46724215	Y	NA	CPB2	NA	NA	NA	NA	CPB2	46842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	47128564	47128952	47128887	Y	LCP1,LRCH1	LRCH1	NA	NA	NA	NA	LRCH1	3261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.450157767185245
chr13	47129209	47129516	47129266	Y	NA	LRCH1	NA	NA	NA	NA	LRCH1	3906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	47149300	47149814	47149489	Y	NA	LRCH1	NA	NA	NA	NA	LRCH1	23997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	47152736	47153076	47152881	Y	NA	LRCH1	NA	NA	NA	NA	LRCH1	27433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	47369610	47369907	47369759	Y	NA	ESD	NA	NA	NA	NA	ESD	243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr13	48323808	48324175	48323992	Y	NA	NAP1L4P3	HTR2A	IMR90	Hi-C	24141950	NAP1L4P3	11420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	48526121	48526135	48526130	Y	MED4,SUCLA2	SUCLA2-AS1	NA	NA	NA	NA	SUCLA2-AS1	47390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr13	48907859	48907955	48907897	Y	NA	LINC00441,RB1	NA	NA	NA	NA	RB1	31972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.207737005836154
chr13	49105819	49106173	49105865	Y	RB1,LPAR6,RCBTB2	RCBTB2	NA	NA	NA	NA	RCBTB2	450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	49563041	49563333	49563220	Y	RCBTB2,CYSLTR2,SETDB2,SETDB2,CDADC1,FNDC3A	FNDC3A	NA	NA	NA	NA	FNDC3A	14993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	49569007	49569270	49569139	Y	NA	FNDC3A	NA	NA	NA	NA	FNDC3A	20959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	49761885	49761908	49761899	Y	NA	NA	NA	NA	NA	NA	CDADC1	58139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246854683408737
chr13	49888133	49888426	49888280	Y	NA	NA	NA	NA	NA	NA	CDADC1	68086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	50209681	50209984	50209832	Y	SETDB2,ARL11	ARL11	NA	NA	NA	NA	ARL11	9246	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	50413145	50413317	50413231	Y	NA	KPNA3	EBPL,KPNA3	IMR90	Hi-C	24141950	KPNA3	48088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr13	50597476	50597810	50597661	Y	RCBTB1,TRIM13	TRIM13,MIR16-1	NA	NA	NA	NA	MIR16-1	23387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	50630657	50630910	50630784	Y	NA	MIR16-1,DLEU1	NA	NA	NA	NA	MIR16-1	9460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	50661413	50661685	50661628	Y	NA	MIR16-1,DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	7106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr13	50671086	50671325	50671206	Y	NA	MIR16-1,DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	16779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	50675373	50675756	50675618	Y	NA	DLEU1,DLEU2	NA	NA	NA	NA	DLEU1	21066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	50696626	50696754	50696746	Y	NA	DLEU1,DLEU2	NA	NA	NA	NA	DLEU2	1102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	50819119	50819505	50819321	Y	KPNA3	NA	DLEU1,DLEU2,DLEU7	IMR90	Hi-C	24141950	RPL34P26	114394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.230421419789826
chr13	50897882	50898235	50898046	Y	NA	RPL34P26	DLEU2,DLEU1	IMR90	Hi-C	24141950	RPL34P26	35664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr13	51034237	51034585	51034411	Y	NA	NA	NA	NA	NA	NA	RPL34P26	100338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	51103280	51103738	51103647	Y	NA	NA	DLEU1,DLEU2,EBPL,TRIM13,MIR3613	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL34P26	169381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr13	51200392	51200766	51200454	Y	NA	NA	NA	NA	NA	NA	RPL34P26	266493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr13	51209543	51210059	51209810	Y	NA	NA	DLEU2	IMR90	Hi-C	24141950	RNASEH2B	271755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	51395866	51396155	51396034	Y	NA	NA	NA	NA	NA	NA	RNASEH2B	85659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr13	52303239	52303556	52303323	Y	WDFY2	NA	NA	NA	NA	NA	DHRS12	72737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr13	52319871	52320068	52319946	Y	NA	NA	NA	NA	NA	NA	DHRS12	56225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	52505834	52506318	52505967	Y	NA	NA	NA	NA	NA	NA	ATP7B	77312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr13	52537870	52538200	52538035	Y	UTP14C	ATP7B,ALG11	NA	NA	NA	NA	ATP7B	45430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr13	52572353	52572390	52572372	Y	NA	ATP7B,ALG11,UTP14C	NA	NA	NA	NA	ATP7B	11240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124907119279381
chr13	60580804	60581154	60581101	Y	NA	NA	NA	NA	NA	NA	DIAPH3	154967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	60679231	60679569	60679243	Y	NA	NA	NA	NA	NA	NA	DIAPH3	56552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr13	60716670	60717071	60716778	Y	NA	DIAPH3	NA	NA	NA	NA	DIAPH3	19050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	64448428	64448510	64448470	Y	NA	NA	NA	NA	NA	NA	LINC00355	199634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	64491531	64491783	64491579	Y	NA	NA	NA	NA	NA	NA	LINC00355	156361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	64508473	64508866	64508848	Y	NA	NA	NA	NA	NA	NA	LINC00355	139278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr13	64537945	64538229	64538154	Y	NA	NA	NA	NA	NA	NA	LINC00355	109915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr13	64589476	64589676	64589576	Y	NA	NA	NA	NA	NA	NA	LINC00355	58468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	64596462	64596642	64596562	Y	NA	NA	NA	NA	NA	NA	LINC00355	51502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	64623751	64624068	64623941	Y	NA	LINC00355	NA	NA	NA	NA	LINC00355	24076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr13	64652316	64652644	64652373	Y	NA	LINC00355	NA	NA	NA	NA	LINC00355	4172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.789704766552578
chr13	72419778	72420070	72419973	Y	DACH1	NA	NA	NA	NA	NA	H3F3BP1	172579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	72996613	72996915	72996766	Y	NA	NA	NA	NA	NA	NA	RPL21P110	278916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	73118273	73118475	73118375	Y	PIBF1	NA	NA	NA	NA	NA	RPL21P110	157356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	74184794	74185193	74184838	Y	NA	NA	PIBF1	IMR90	Hi-C	24141950	RNU4-10P	421129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	74339681	74339964	74339912	Y	KLF12	NA	NA	NA	NA	NA	KLF12	366430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr13	74707257	74707359	74707330	Y	NA	KLF12	NA	NA	NA	NA	KLF12	863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	74708897	74709334	74709161	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	2503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr13	74709487	74710034	74709735	Y	KLF12	KLF12	NA	NA	NA	NA	KLF12	3093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr13	75904010	75904233	75904150	Y	NA	NA	NA	NA	NA	NA	TBC1D4	150017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr13	75965393	75965547	75965541	Y	NA	NA	NA	NA	NA	NA	TBC1D4	88703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	75966064	75966537	75966363	Y	TBC1D4	NA	NA	NA	NA	NA	TBC1D4	87713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr13	76138851	76139260	76139031	Y	NA	COMMD6,UCHL3	NA	NA	NA	NA	UCHL3	17232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr13	76159377	76159493	76159435	Y	NA	COMMD6,UCHL3,LMO7	NA	NA	NA	NA	LMO7	33077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	76269053	76269192	76269124	Y	NA	NA	NA	NA	NA	NA	LMO7	76483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	76290964	76291186	76291007	Y	NA	NA	NA	NA	NA	NA	LMO7	98394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	77299321	77299673	77299497	Y	NA	NA	LMO7,KCTD12	IMR90	Hi-C	24141950	RPL7P44	254378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	77881758	77881859	77881809	Y	SLAIN1	MYCBP2	NA	NA	NA	NA	MYCBP2	17326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	79232403	79232753	79232546	Y	NA	RNF219	NA	NA	NA	NA	RNF219	1089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr13	80916096	80916414	80916232	Y	NA	SPRY2	NA	NA	NA	NA	SPRY2	3010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr13	80916799	80917232	80917156	Y	NA	SPRY2	NA	NA	NA	NA	SPRY2	3713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr13	90280345	90280708	90280402	Y	NA	NA	NA	NA	NA	NA	MIR17HG	1717366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	92868650	92868886	92868807	Y	NA	NA	NA	NA	NA	NA	RNU4ATAC3P	158553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	93870012	93870383	93870198	Y	NA	GPC6	GPC6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	GPC6	6712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	93880621	93881133	93881009	Y	NA	GPC6	NA	NA	NA	NA	GPC6	3526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.284327074996151
chr13	93899040	93899272	93899121	Y	NA	GPC6	NA	NA	NA	NA	GPC6	21945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr13	93915220	93915506	93915338	Y	NA	GPC6	NA	NA	NA	NA	GPC6	38125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	94191953	94192210	94192082	Y	NA	NA	NA	NA	NA	NA	SNORD22	172740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	94297506	94297518	94297511	Y	GPC6	NA	NA	NA	NA	NA	SNORD22	278293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr13	94551696	94551729	94551713	Y	NA	NA	NA	NA	NA	NA	SNORD22	532483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	94706563	94706645	94706604	Y	NA	NA	NA	NA	NA	NA	TGDS	539866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	94762314	94762622	94762468	Y	NA	NA	NA	NA	NA	NA	TGDS	483889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	94766317	94766480	94766414	Y	NA	NA	NA	NA	NA	NA	TGDS	480031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	94785518	94785984	94785813	Y	NA	NA	NA	NA	NA	NA	TGDS	460527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr13	95201580	95202169	95201893	Y	NA	TGDS,GPR180	NA	NA	NA	NA	TGDS	44342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	95931058	95931197	95931128	Y	ABCC4	ABCC4	NA	NA	NA	NA	ABCC4	20490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	95932787	95933077	95933010	Y	NA	ABCC4	NA	NA	NA	NA	ABCC4	18610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr13	95938060	95938332	95938319	Y	NA	ABCC4	NA	NA	NA	NA	ABCC4	13355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	95951518	95951672	95951596	Y	ABCC4	ABCC4	NA	NA	NA	NA	ABCC4	15	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	96164777	96165033	96164905	Y	NA	CLDN10-AS1	NA	NA	NA	NA	CLDN10-AS1	19131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	96284564	96284961	96284763	Y	NA	DZIP1,DNAJC3-AS1,DNAJC3	NA	NA	NA	NA	DZIP1	9996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	96498991	96499334	96499248	Y	NA	NA	NA	NA	NA	NA	DNAJC3	171598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	96517437	96517518	96517478	Y	NA	NA	NA	NA	NA	NA	UGGT2	186218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	97877294	97877762	97877400	Y	NA	MBNL2	NA	NA	NA	NA	MBNL2	5606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr13	97879082	97879401	97879140	Y	NA	MBNL2	NA	NA	NA	NA	MBNL2	7394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	97908706	97909024	97908751	Y	NA	MBNL2	NA	NA	NA	NA	MBNL2	37018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	98599587	98599881	98599659	Y	NA	IPO5	NA	NA	NA	NA	IPO5	4031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	98921705	98921995	98921808	Y	NA	NA	NA	NA	NA	NA	FARP1	128889	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.76314951056928
chr13	98924976	98925080	98925019	Y	NA	NA	NA	NA	NA	NA	FARP1	132160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr13	98926557	98926890	98926623	Y	NA	NA	NA	NA	NA	NA	FARP1	133741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr13	99121203	99121258	99121231	Y	NA	NA	NA	NA	NA	NA	STK24	106936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	99161455	99162128	99161863	Y	NA	NA	NA	NA	NA	NA	STK24	66066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	99223213	99223429	99223417	Y	STK24	STK24	NA	NA	NA	NA	STK24	4765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr13	99562711	99562955	99562841	Y	GPR183,STK24	NA	NA	NA	NA	NA	CALM2P4	271218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	99737310	99737596	99737454	Y	DOCK9	NA	NA	NA	NA	NA	UBAC2-AS1	113368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	99934888	99935365	99935021	Y	DOCK9,UBAC2,UBAC2,GPR18,GPR183	NA	NA	NA	NA	NA	H2AFZP3	68876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	99935844	99936009	99935907	Y	GPR183	NA	NA	NA	NA	NA	H2AFZP3	69832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr13	99956041	99956410	99956299	Y	GPR18,GPR183	NA	NA	NA	NA	NA	H2AFZP3	90029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	99962652	99963115	99962844	Y	GPR183	NA	NA	NA	NA	NA	H2AFZP3	96640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	100010340	100010660	100010510	Y	DOCK9,UBAC2,UBAC2,GPR183,CLYBL	NA	NA	NA	NA	NA	TM9SF2	141011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	100013491	100013836	100013585	Y	DOCK9,UBAC2,UBAC2,GPR18,GPR183,CLYBL	NA	NA	NA	NA	NA	TM9SF2	137835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr13	100084902	100085483	100085174	Y	GPR183	NA	MIR548AN,UBAC2,DOCK9,UBAC2-AS1	IMR90	Hi-C	24141950	TM9SF2	66188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	100340110	100340301	100340201	Y	NA	NA	NA	NA	NA	NA	CLYBL	83191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	100642436	100643177	100642812	Y	ZIC5,ZIC2	ZIC5	NA	NA	NA	NA	ZIC5	20273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	103244790	103245125	103245073	Y	ERCC5,TPP2	TPP2	TPP2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	TPP2	2228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	103250853	103251030	103250900	Y	NA	TPP2	NA	NA	NA	NA	TPP2	3500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	104371816	104371919	104371873	Y	NA	NA	NA	NA	NA	NA	ERCC5	876622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr13	106753025	106753272	106753030	Y	ARGLU1	NA	EFNB2	IMR90	Hi-C	24141950	ARGLU1	465240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	107078443	107078580	107078574	Y	NA	NA	NA	NA	NA	NA	ARGLU1	139932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	107222796	107223196	107222998	Y	NA	ARGLU1	NA	NA	NA	NA	ARGLU1	4284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	107225813	107226005	107225909	Y	NA	ARGLU1	NA	NA	NA	NA	ARGLU1	7301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	107448247	107448283	107448269	Y	NA	NA	NA	NA	NA	NA	ATP5G1P5	134462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	109568044	109568430	109568179	Y	NA	NA	NA	NA	NA	NA	ABHD13	699317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr13	110181276	110181465	110181371	Y	IRS2	NA	MYO16,IRS2	IMR90	Hi-C	24141950	RAB20	1030615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	110746992	110747342	110747118	Y	NA	NA	MYO16,IRS2	IMR90	Hi-C	24141950	RAB20	464738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr13	110790027	110791241	110790617	Y	RAB20,IRS2	NA	NA	NA	NA	NA	RAB20	420839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	111212014	111212166	111212090	Y	ING1,ING1,ANKRD10,RAB20	NA	COL4A2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RAB20	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	111212967	111213224	111213111	Y	ING1,ING1,ANKRD10,RAB20	RAB20	COL4A2	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RAB20	887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	111227983	111228269	111228196	Y	ING1,ING1,ANKRD10,RAB20	RAB20,CARKD	RAB20	IMR90	Hi-C	24141950	RAB20	15903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	111312907	111313086	111312997	Y	NA	CARKD,ING1	NA	NA	NA	NA	CARKD	47026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	111526935	111527249	111527195	Y	RAB20	LINC00346,ANKRD10	NA	NA	NA	NA	LINC00346	6773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	111544033	111544176	111544105	Y	ING1,ING1	LINC00346,ANKRD10	NA	NA	NA	NA	ANKRD10	21240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	111560939	111561133	111561094	Y	NA	LINC00346,ANKRD10	NA	NA	NA	NA	ANKRD10	4283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr13	111564894	111565358	111565241	Y	RAB20,ING1,ING1,ARHGEF7,ANKRD10	LINC00346,ANKRD10	NA	NA	NA	NA	ANKRD10	58	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	111589420	111590157	111589779	Y	NA	ANKRD10	ARHGEF7,LINC00346	IMR90	Hi-C	24141950	ANKRD10	24004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.831450470847675
chr13	111607450	111607830	111607755	Y	RAB20,ING1,ING1,ANKRD10	ANKRD10	ARHGEF7,ANKRD10	IMR90	Hi-C	24141950	ANKRD10	42034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	111609846	111610157	111610005	Y	RAB20,ANKRD10	ANKRD10	ARHGEF7,ANKRD10	IMR90	Hi-C	24141950	ANKRD10	44430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	112347236	112347393	112347316	Y	NA	NA	SOX1	IMR90	Hi-C	24141950	SNORD44	356999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	113179985	113180373	113180107	Y	NA	NA	NA	NA	NA	NA	TUBGCP3	60108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	113377120	113377559	113377252	Y	NA	ATP11A	NA	NA	NA	NA	ATP11A	34477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr13	113514166	113514374	113514224	Y	NA	MCF2L	NA	NA	NA	NA	MCF2L	32318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr13	113549464	113549664	113549543	Y	NA	MCF2L	NA	NA	NA	NA	MCF2L	2772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr13	113585588	113585716	113585676	Y	CUL4A,CUL4A	MCF2L,MCF2L-AS1	C13orf35,ATP11A,MCF2L	GM12878,HELA,K562,H1ESC	5C	22955621	MCF2L-AS1	35422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr13	113588902	113588931	113588917	Y	NA	MCF2L,MCF2L-AS1	MCF2L,MCF2L-AS1,F10,F7,CUL4A	H1ESC,HELA,K562,IMR90	5C,Hi-C	22955621,24141950	MCF2L-AS1	32207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	113597069	113597276	113597160	Y	MCF2L	MCF2L-AS1	MCF2L,MCF2L-AS1,F10,F7,CUL4A	H1ESC,HELA,K562,IMR90,MCF7	5C,Hi-C,ChIA-PET	22955621,24141950,22265404	MCF2L-AS1	23862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr13	113607211	113607493	113607342	Y	NA	MCF2L-AS1	NA	NA	NA	NA	MCF2L-AS1	13645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.70605223700322
chr13	113660175	113660436	113660306	Y	NA	MCF2L-AS1	NA	NA	NA	NA	MCF2L-AS1	39037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	113677034	113677374	113677296	Y	NA	NA	NA	NA	NA	NA	MCF2L-AS1	55896	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.45449222402709
chr13	113704885	113705219	113705051	Y	NA	NA	NA	NA	NA	NA	F7	52886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	113806516	113806910	113806731	Y	ATP11A,CUL4A	F7,F10,PROZ	PROZ	IMR90	Hi-C	24141950	PROZ	4058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.16500804919651
chr13	113808289	113808746	113808533	Y	NA	F10,PROZ	PROZ	IMR90	Hi-C	24141950	PROZ	2222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr13	114127046	114127213	114127130	Y	GRTP1,DCUN1D2	RNU1-16P,DCUN1D2,TMCO3	NA	NA	NA	NA	RNU1-16P	4180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	114147699	114148153	114147800	Y	F7,F10,PROZ,GRTP1	RNU1-16P,DCUN1D2,TMCO3	NA	NA	NA	NA	TMCO3	4389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.568162523820028
chr13	114301802	114302224	114301872	Y	GAS6	NA	NA	NA	NA	NA	TFDP1	64789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr13	114445132	114445240	114445183	Y	RASA3	NA	NA	NA	NA	NA	GAS6-AS1	71363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.367819506800746
chr13	114557275	114557469	114557370	Y	GAS6	GAS6-AS1	NA	NA	NA	NA	GAS6-AS1	40672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr13	114862790	114863121	114862935	Y	RASA3	RASA3	NA	NA	NA	NA	RASA3	32965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr13	115046177	115046319	115046229	Y	RASA3	CDC16,UPF3A,CHAMP1	NA	NA	NA	NA	UPF3A	1118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr14	20803011	20803143	20803077	Y	NA	TTC5,CCNB1IP1,PARP2,RPPH1	NA	NA	NA	NA	CCNB1IP1	3540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	21150605	21151121	21150987	Y	TEP1,TMEM55B,PNP,ZNF219,ARHGEF40	RNASE4,ANG	NA	NA	NA	NA	ANG	269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.893081643298381
chr14	21151333	21151694	21151411	Y	NA	RNASE4,ANG	NA	NA	NA	NA	ANG	997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	21154551	21154914	21154765	Y	NDRG2	RNASE4,ANG	NA	NA	NA	NA	ANG	4215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.631930608428176
chr14	21175884	21176052	21175958	Y	NA	RNASE4,ANG	NA	NA	NA	NA	ANG	25548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	21288613	21288985	21288797	Y	NA	RNASE1	NA	NA	NA	NA	RNASE1	19176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	21439863	21440073	21439999	Y	NA	RNASE2,METTL17	NA	NA	NA	NA	METTL17	15856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr14	21522548	21522854	21522702	Y	NA	AL161668.5,ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	ARHGEF40	13575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.685013109034717
chr14	21529107	21529436	21529241	Y	NA	AL161668.5,ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	ARHGEF40	6993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434707244303682
chr14	21540493	21540634	21540528	Y	RNASE6,TOX4,HNRNPC,ARHGEF40	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	NDRG2	3462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	21564675	21565076	21564876	Y	NA	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	ZNF219	5805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	21577986	21578258	21578000	Y	NA	ARHGEF40,NDRG2,ZNF219	NA	NA	NA	NA	ZNF219	7105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233872601112125
chr14	21660147	21660368	21660311	Y	NA	NA	NA	NA	NA	NA	HNRNPC	75285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	21684818	21685080	21685024	Y	OR10G2,OR4E2,OR10G3,RNASE8,OR5AU1	NA	NA	NA	NA	NA	HNRNPC	50573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr14	22025629	22026018	22025838	Y	NA	METTL3,SALL2	NA	NA	NA	NA	SALL2	22279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	22080552	22080764	22080649	Y	NA	NA	NA	NA	NA	NA	SALL2	77202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr14	23169368	23169492	23169430	Y	REM2	CTD-2555K7.1	OXA1L,SLC7A7,DAD1,RBM23	IMR90	Hi-C	24141950	CTD-2555K7.1	7624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr14	23222866	23223018	23222950	Y	NA	OXA1L,CTD-2555K7.2	NA	NA	NA	NA	OXA1L	10713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	23293879	23294567	23294288	Y	RBM23,C14orf119,SLC7A7,SLC7A7	SLC7A7,MRPL52,MMP14,LRP10	REM2	MCF7	ChIA-PET	22265404	SLC7A7	2462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr14	23308431	23309148	23308805	Y	NA	SLC7A7,MRPL52,MMP14,LRP10	NA	NA	NA	NA	MMP14	4665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	23358205	23358555	23358381	Y	NA	LRP10,RBM23,PRMT5,RP11-298I3.1	NA	NA	NA	NA	LRP10	19383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	23449151	23449315	23449234	Y	MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB	MIR4707,HAUS4,AJUBA,C14orf93	NA	NA	NA	NA	AJUBA	536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.429941793816525
chr14	23449757	23450231	23450060	Y	MRPL52,PSMB5,PSMB5,HOMEZ,PRMT5,JUB,JUB	MIR4707,HAUS4,C14orf93	NA	NA	NA	NA	AJUBA	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.55179905931236
chr14	23466494	23466910	23466688	Y	CDH24,C14orf93	MIR4707,HAUS4,AJUBA,C14orf93,PSMB5	NA	NA	NA	NA	C14orf93	10465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	23554726	23554907	23554813	Y	SLC7A7,RBM23,ACIN1	CDH24,C14orf119,ACIN1	NA	NA	NA	NA	C14orf119	7067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	24018554	24018930	24018908	Y	NA	THTPA,ZFHX2,AP1G2,JPH4	NA	NA	NA	NA	THTPA	4286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	24058094	24058646	24058322	Y	NA	THTPA,ZFHX2,AP1G2,JPH4,DHRS2	NA	NA	NA	NA	JPH4	12085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr14	24071678	24071902	24071737	Y	NA	THTPA,ZFHX2,AP1G2,JPH4,DHRS2	C14orf167	IMR90	Hi-C	24141950	DHRS2	25422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.608262942129958
chr14	24081623	24081972	24081673	Y	NA	AP1G2,JPH4,DHRS2	C14orf167	IMR90	Hi-C	24141950	DHRS2	15352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	24163763	24164098	24163827	Y	NA	NA	NA	NA	NA	NA	DHRS2	66439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.294680618963047
chr14	24454112	24454320	24454216	Y	DHRS4L2,DHRS4L2	DHRS4,DHRS4L2	NA	NA	NA	NA	DHRS4L2	16964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	24481106	24481351	24481229	Y	NA	DHRS4L2,LRRC16B	NA	NA	NA	NA	LRRC16B	37855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr14	24503912	24503926	24503919	Y	NA	LRRC16B	NA	NA	NA	NA	LRRC16B	15280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	24604383	24604748	24604550	Y	NA	PCK2,DCAF11,FITM1,PSME1,RNF31,PSME2,IRF9	NA	NA	NA	NA	PSME1	1016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr14	24712544	24712898	24712739	Y	DHRS4L1,DCAF11,DCAF11,PSME1,RNF31,IRF9,RIPK3,LTB4R,KHNYN,CIDEB,TINF2	TM9SF1,CHMP4A,MDP1,NEDD8-MDP1,GMPR2,NEDD8,TINF2,RABGGTA	NA	NA	NA	NA	TINF2	2664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	24747075	24747483	24747259	Y	DCAF11,PSME1,IRF9,KHNYN,TINF2	NEDD8-MDP1,GMPR2,NEDD8,TINF2,RABGGTA,DHRS1,CIDEB	NA	NA	NA	NA	RABGGTA	8130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	24755187	24755313	24755250	Y	DHRS4L1	TINF2,RABGGTA,DHRS1,CIDEB	NA	NA	NA	NA	DHRS1	11726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr14	24891908	24892270	24892086	Y	NA	NYNRIN,KHNYN,SDR39U1	NA	NA	NA	NA	KHNYN	4222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr14	24934340	24934390	24934365	Y	NA	KHNYN,SDR39U1	NA	NA	NA	NA	SDR39U1	24229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	25312812	25313037	25312925	Y	CMA1,CTSG,STXBP6	NA	NA	NA	NA	NA	STXBP6	204466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	25385464	25385666	25385565	Y	CMA1,CTSG,STXBP6	NA	NA	NA	NA	NA	STXBP6	131837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	25490205	25490234	25490213	Y	NA	STXBP6	NA	NA	NA	NA	STXBP6	27269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	30663968	30664325	30664158	Y	PRKD1	PRKD1	PRKD1,FOXG1,C14orf23	IMR90	Hi-C	24141950	PRKD1	4864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	31055388	31055443	31055417	Y	NA	G2E3,SCFD1	NA	NA	NA	NA	G2E3	29059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	31165114	31165442	31165278	Y	NA	NA	NA	NA	NA	NA	SCFD1	75796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr14	31360303	31360625	31360494	Y	NA	COCH	NA	NA	NA	NA	COCH	18583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr14	31400109	31400220	31400192	Y	NA	NA	NA	NA	NA	NA	COCH	58389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	31455672	31455729	31455709	Y	NA	AP4S1,STRN3	NA	NA	NA	NA	AP4S1	36583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	31478440	31478826	31478753	Y	NA	AP4S1,STRN3	NA	NA	NA	NA	AP4S1	13486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr14	31559968	31560471	31560185	Y	SCFD1,GPR33,STRN3	NA	NA	NA	NA	NA	STRN3	66361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr14	31698850	31699225	31699035	Y	STRN3	HECTD1	AP4S1,HECTD1,STRN3,HEATR5A	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	HECTD1	23840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.281698536666436
chr14	31732842	31733131	31732940	Y	NA	NA	AP4S1,HEATR5A,HECTD1,STRN3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HECTD1	57832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	32261719	32262250	32261957	Y	NA	NA	NA	NA	NA	NA	RP11-187E13.1	149809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr14	32597823	32598061	32597946	Y	NUBPL	NA	NA	NA	NA	NA	ARHGAP5-AS1	53824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr14	32670916	32671247	32671221	Y	NA	NA	NUBPL,ARHGAP5-AS1,ARHGAP5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP5-AS1	126917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr14	32672212	32672871	32672506	Y	ARHGAP5	NA	NUBPL,ARHGAP5-AS1,ARHGAP5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP5-AS1	128213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	32833367	32833525	32833442	Y	NA	NA	NA	NA	NA	NA	RP11-320M16.1	118481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	32953597	32954289	32954012	Y	ARHGAP5,AKAP6,NPAS3	RP11-320M16.1	NA	NA	NA	NA	RP11-320M16.1	1591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.702600544073722
chr14	34479811	34480147	34480032	Y	NA	EGLN3-AS1	NA	NA	NA	NA	EGLN3-AS1	27156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	34504920	34505230	34505078	Y	NA	EGLN3-AS1	EGLN3	MCF7	ChIA-PET	22265404	EGLN3-AS1	2073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.786093487485516
chr14	34507932	34508142	34508077	Y	EGLN3	EGLN3-AS1	EGLN3	MCF7	ChIA-PET	22265404	EGLN3-AS1	629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr14	34529400	34529785	34529476	Y	EGLN3	EGLN3-AS1	EGLN3	K562,MCF7	ChIA-PET	22265404	EGLN3-AS1	22097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr14	34801443	34801630	34801553	Y	NA	NA	SPTSSA	MCF7	ChIA-PET	22265404	SPTSSA	127932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.728565220274145
chr14	34802064	34802306	34802186	Y	C14orf147	NA	SPTSSA	MCF7	ChIA-PET	22265404	SPTSSA	127256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.459197041987284
chr14	34841489	34841821	34841726	Y	NA	NA	SPTSSA	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	SPTSSA	87741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	34966252	34966485	34966304	Y	NA	SPTSSA,EGLN3,EAPP	NA	NA	NA	NA	EGLN3	36272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.31358232316691
chr14	35084533	35084797	35084665	Y	EAPP	RPS19P3,SNX6	NA	NA	NA	NA	SNX6	12592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	35090811	35090907	35090859	Y	NA	SNX6	NA	NA	NA	NA	SNX6	6482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr14	35250371	35250766	35250653	Y	SRP54,BAZ1A	NA	NA	NA	NA	NA	CFL2	68342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35274619	35275001	35274810	Y	PPP2R3C,BAZ1A	NA	NA	NA	NA	NA	RP11-73E17.2	66548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	35303172	35303324	35303248	Y	SRP54,PPP2R3C,FAM177A1,BAZ1A	RP11-73E17.2,BAZ1A	NA	NA	NA	NA	RP11-73E17.2	38225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35346506	35346753	35346630	Y	PSMA6,EAPP,PPP2R3C,FAM177A1,BAZ1A	RP11-73E17.2,BAZ1A	NA	NA	NA	NA	BAZ1A	3653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	35399728	35399899	35399840	Y	NFKBIA,EAPP,BAZ1A,PPP2R3C,KIAA0391,FAM177A1	SRP54,RP11-85K15.2	BAZ1A	IMR90	Hi-C	24141950	SRP54	49264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35562791	35563105	35562948	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	PPP2R3C	26618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	35575000	35575033	35575017	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	PPP2R3C	14690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	35625298	35625573	35625393	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	KIAA0391	35543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	35628271	35628433	35628369	Y	NA	PPP2R3C,KIAA0391	NA	NA	NA	NA	KIAA0391	38516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35666202	35666508	35666414	Y	BAZ1A,FAM177A1,NFKBIA	NA	NA	NA	NA	NA	KIAA0391	76447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	35754543	35755119	35754804	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	8704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35755529	35755685	35755573	Y	BAZ1A,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	9690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	35755957	35756376	35756177	Y	BAZ1A,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	10118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	35767605	35767844	35767749	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,NFKBIA,PSMA6	PSMA6	NA	NA	NA	NA	PSMA6	21766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35800965	35801124	35801022	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	NA	NA	NA	NA	NA	PSMA6	55126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35801463	35801750	35801570	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	NA	NA	NA	NA	NA	RP11-561B11.1	54525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	35802308	35802726	35802409	Y	BAZ1A,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	NA	NA	NA	NA	NA	RP11-561B11.1	53549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr14	35805683	35806194	35806003	Y	BAZ1A,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	NA	NA	NA	NA	NA	RP11-561B11.1	50081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351054714754325
chr14	35810635	35811251	35810911	Y	BAZ1A,FAM177A1,RALGAPA1,NFKBIA	RP11-561B11.1	PPP2R3C,KIAA0391,PSMA6,NFKBIA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-561B11.1	45024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.374721869445343
chr14	35816738	35817044	35816815	Y	NA	RP11-561B11.1	KIAA0391,PPP2R3C,PSMA6	IMR90	Hi-C	24141950	RP11-561B11.1	39231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr14	35825324	35825456	35825405	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	RP11-561B11.1,NFKBIA	PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA	IMR90	Hi-C	24141950	RP11-561B11.1	30819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35834310	35835208	35834855	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	RP11-561B11.1,NFKBIA	PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-561B11.1	21067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr14	35835253	35835895	35835561	Y	BAZ1A,SRP54,FAM177A1,PPP2R3C,PSMA6,RALGAPA1,NFKBIA	RP11-561B11.1,NFKBIA	PSMA6,SNX6,PPP2R3C,KIAA0391,NFKBIA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-561B11.1	20380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	35854902	35855043	35854959	Y	NA	RP11-561B11.1,NFKBIA	NA	NA	NA	NA	RP11-561B11.1	1232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341192285352501
chr14	35865196	35865330	35865211	Y	RALGAPA1,NFKBIA	RP11-561B11.1,NFKBIA	NA	NA	NA	NA	NFKBIA	6625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	35875293	35875611	35875452	Y	NA	RP11-561B11.1,NFKBIA	NA	NA	NA	NA	NFKBIA	3338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	36073737	36073816	36073791	Y	NA	NA	NA	NA	NA	NA	INSM2	72489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	36235126	36235268	36235197	Y	NA	RALGAPA1	NA	NA	NA	NA	RALGAPA1	41242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	36277376	36277519	36277444	Y	NFKBIA,RALGAPA1	RALGAPA1,NUTF2P2,BRMS1L	NA	NA	NA	NA	RALGAPA1	866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr14	36778207	36778309	36778259	Y	NA	MBIP	NA	NA	NA	NA	MBIP	9573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	37317346	37317701	37317507	Y	NKX2-8,SLC25A21,MIPOL1	NA	NA	NA	NA	NA	SLC25A21	322370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	37465189	37465490	37465428	Y	NKX2-8,SLC25A21,MIPOL1	NA	NA	NA	NA	NA	SLC25A21	174581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	37785804	37785829	37785809	Y	NA	NA	NA	NA	NA	NA	MIPOL1	120686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr14	38052956	38053419	38053189	Y	FOXA1	TTC6,FOXA1	NA	NA	NA	NA	TTC6	9633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr14	38057887	38058022	38057995	Y	FOXA1	TTC6,FOXA1	NA	NA	NA	NA	TTC6	5030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.322290581148639
chr14	38188537	38188545	38188541	Y	NA	NA	NA	NA	NA	NA	FOXA1	121292	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	39559553	39559840	39559693	Y	NA	SEC23A,GEMIN2	NA	NA	NA	NA	SEC23A	17010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr14	39637578	39637824	39637713	Y	NA	PNN	NA	NA	NA	NA	TRAPPC6B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr14	39664073	39664414	39664121	Y	SIP1,PNN	TRAPPC6B,PNN,MIA2	NA	NA	NA	NA	PNN	21686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	39737909	39738305	39738022	Y	NA	MIA2,CTAGE5	NA	NA	NA	NA	CTAGE5	5421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	39768270	39768447	39768359	Y	PNN,MIA2	CTAGE5	NA	NA	NA	NA	CTAGE5	35782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr14	39892906	39893200	39893154	Y	FBXO33	FBXO33,RP11-111A21.1	NA	NA	NA	NA	FBXO33	6504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	39900071	39900466	39900211	Y	PNN,CTAGE5,FBXO33	FBXO33,RP11-111A21.1	NA	NA	NA	NA	FBXO33	367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	39958924	39958943	39958934	Y	NA	RP11-111A21.1	NA	NA	NA	NA	RP11-111A21.1	16880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr14	42297588	42297942	42297766	Y	LRFN5	NA	NA	NA	NA	NA	RP11-111A21.1	2355544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	44072704	44073040	44072872	Y	NA	NA	NA	NA	NA	NA	C14orf28	1291458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	44249775	44250158	44250052	Y	NA	NA	NA	NA	NA	NA	C14orf28	1114340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285641344161008
chr14	45554390	45554749	45554468	Y	NA	KLHL28,PRPF39,FKBP3,FANCM	NA	NA	NA	NA	PRPF39	3088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr14	45592379	45592731	45592576	Y	PRPF39	PRPF39,FKBP3,FANCM	NA	NA	NA	NA	FKBP3	9791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	45714299	45714525	45714379	Y	NA	MIS18BP1	NA	NA	NA	NA	MIS18BP1	6218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	45721298	45721397	45721336	Y	KLHL28,PRPF39,FANCM,MIS18BP1	MIS18BP1	NA	NA	NA	NA	MIS18BP1	555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	45723245	45723364	45723320	Y	NA	MIS18BP1	NA	NA	NA	NA	MIS18BP1	2502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	48109739	48110114	48110083	Y	MDGA2	NA	NA	NA	NA	NA	RPL13AP2	441432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	50090977	50091033	50091007	Y	METTL21D,ARF6,RPS29,NEMF,KLHDC2,RPL36AL,MGAT2,KLHDC1,DNAAF2	RPS29,LRR1,RPL36AL,MGAT2,DNAAF2	NA	NA	NA	NA	MGAT2	5488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	50237132	50237443	50237218	Y	KLHDC2	KLHDC2	NA	NA	NA	NA	KLHDC2	4806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.828490915697649
chr14	50256678	50256775	50256761	Y	NA	KLHDC2	NA	NA	NA	NA	KLHDC2	24352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	50328432	50328642	50328440	Y	METTL21D,ARF6,RPL36AL,DNAAF2	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	10511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.301091867042572
chr14	50328882	50329315	50329091	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	10961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr14	50329576	50329987	50329651	Y	NA	NEMF,ARF6	SOS2,C14orf182,METTL21D,NEMF,ARF6,C14orf183,DNAAF2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	11655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.969671712458378
chr14	50334846	50335244	50334992	Y	RPL36AL,MGAT2,NEMF,C14orf182,SOS2,METTL21D,ARF6	NEMF,ARF6	SOS2,C14orf182,NEMF,ARF6,METTL21D,C14orf183	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NEMF	16925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.549260819616166
chr14	50439731	50439867	50439806	Y	NA	C14orf182	NA	NA	NA	NA	C14orf182	32371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	50467375	50468846	50468075	Y	RPS29,RPL36AL,ARF6,L2HGDH,ATP5S,METTL21D	C14orf182	NA	NA	NA	NA	C14orf182	3392	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.52681814706369
chr14	50475850	50475934	50475889	Y	ARF6,C14orf182	C14orf182	NA	NA	NA	NA	C14orf182	3612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	50511824	50512400	50511896	Y	RPL36AL,ARF6,SOS2,C14orf182	C14orf182	C14orf182,ARF6	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	C14orf182	39586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr14	50527611	50528257	50527921	Y	RPL36AL,ARF6,C14orf182	NA	NA	NA	NA	NA	C14orf182	55373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.251951662323404
chr14	50528497	50528810	50528555	Y	NA	NA	NA	NA	NA	NA	C14orf182	56259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.415313913927546
chr14	50648447	50648735	50648723	Y	NA	SOS2	NA	NA	NA	NA	SOS2	47541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr14	50681069	50681448	50681362	Y	NA	SOS2	NA	NA	NA	NA	SOS2	14828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	50799629	50799645	50799635	Y	NA	ATP5S,L2HGDH	NA	NA	NA	NA	L2HGDH	22363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr14	50926261	50926342	50926322	Y	MAP4K5,ATL1,ATL1,CDKL1	CDKL1	NA	NA	NA	NA	CDKL1	45082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	51302196	51302378	51302287	Y	NIN	NIN	NA	NA	NA	NA	NIN	6357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	51410207	51410388	51410282	Y	NIN,PYGL	PYGL	NA	NA	NA	NA	PYGL	753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.302897250772503
chr14	52584121	52584359	52584179	Y	NA	NA	NID2,C14orf166	IMR90	Hi-C	24141950	C14orf166	129928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	53020677	53020806	53020735	Y	PTGDR,TXNDC16,GPR137C	TXNDC16,GPR137C	NA	NA	NA	NA	GPR137C	2811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	53257268	53257587	53257438	Y	NA	GNPNAT1	NA	NA	NA	NA	GNPNAT1	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr14	53294197	53294464	53294329	Y	NA	GNPNAT1	FERMT2	IMR90	Hi-C	24141950	GNPNAT1	37811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	53392802	53392977	53392890	Y	NA	FERMT2	NA	NA	NA	NA	FERMT2	24176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.25671711281056
chr14	53416335	53416646	53416599	Y	GPR137C	FERMT2	NA	NA	NA	NA	FERMT2	507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	53421198	53421586	53421381	Y	NA	FERMT2	NA	NA	NA	NA	FERMT2	4045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	54465835	54466164	54465918	Y	NA	BMP4	NA	NA	NA	NA	BMP4	42356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	54515251	54515593	54515511	Y	NA	NA	NA	NA	NA	NA	BMP4	91772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	54573774	54574066	54573953	Y	NA	NA	NA	NA	NA	NA	BMP4	150295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	54603712	54603948	54603796	Y	NA	NA	NA	NA	NA	NA	BMP4	180233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.659871587434078
chr14	54640534	54640974	54640637	Y	NA	NA	BMP4	IMR90	Hi-C	24141950	BMP4	217055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	54758286	54758405	54758397	Y	NA	NA	NA	NA	NA	NA	CDKN3	103162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	54833964	54834357	54834051	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	27210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.548929291188655
chr14	54900763	54901015	54900977	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	39196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	54902274	54902529	54902415	Y	NA	CDKN3	NA	NA	NA	NA	CDKN3	40707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	54917293	54917567	54917392	Y	GMFB,GCH1,CGRRF1	GMFB	CNIH,CGRRF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	GMFB	36347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	54954614	54954684	54954648	Y	NA	GMFB,CGRRF1	NA	NA	NA	NA	GMFB	700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr14	55035984	55036343	55036300	Y	SAMD4A	SAMD4A	NA	NA	NA	NA	SAMD4A	4169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	55094268	55094954	55094583	Y	GMFB,MAPK1IP1L,GCH1	NA	NA	NA	NA	NA	SAMD4A	62453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	55109619	55109800	55109713	Y	NA	NA	NA	NA	NA	NA	SAMD4A	77804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	55116749	55117607	55117330	Y	NA	NA	NA	NA	NA	NA	SAMD4A	84934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	55120784	55121076	55120951	Y	NA	NA	NA	NA	NA	NA	SAMD4A	88969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	55173516	55173842	55173679	Y	SAMD4A	NA	NA	NA	NA	NA	SAMD4A	141701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	55197259	55197652	55197332	Y	NA	NA	NA	NA	NA	NA	SAMD4A	165444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	55240829	55240954	55240892	Y	NA	NA	NA	NA	NA	NA	GCH1	126616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	55439267	55439511	55439438	Y	NA	NA	NA	NA	NA	NA	WDHD1	52312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr14	55541499	55541595	55541574	Y	NA	WDHD1,SOCS4,MAPK1IP1L,LGALS3	NA	NA	NA	NA	MAPK1IP1L	25150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	55544307	55544654	55544518	Y	NA	MAPK1IP1L,LGALS3	NA	NA	NA	NA	MAPK1IP1L	27958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr14	55569733	55570176	55570087	Y	LGALS3,FBXO34,FBXO34,GCH1,MAPK1IP1L	LGALS3	LGALS3,DLGAP5,MAPK1IP1L	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	LGALS3	18652	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.02513235501636
chr14	55574465	55575376	55574639	Y	GCH1,MAPK1IP1L,FBXO34,FBXO34,LGALS3	LGALS3	MAPK1IP1L	IMR90	Hi-C	24141950	LGALS3	13452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr14	55589903	55590059	55589993	Y	GCH1,MAPK1IP1L,FBXO34,FBXO34,LGALS3	LGALS3	LGALS3,DLGAP5,WDHD1,MAPK1IP1L	IMR90	Hi-C	24141950	LGALS3	1075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	55731972	55732298	55732133	Y	GCH1,MAPK1IP1L,LGALS3,FBXO34,FBXO34	FBXO34,RP11-665C16.6	TBPL2,FBXO34	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FBXO34	3723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	55765939	55766288	55766115	Y	GCH1	FBXO34,RP11-665C16.6	NA	NA	NA	NA	RP11-665C16.6	29146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	55921336	55921695	55921412	Y	NA	ATG14	NA	NA	NA	NA	ATG14	44760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	56047594	56047945	56047904	Y	NA	RPL7AP4,KTN1,KTN1-AS1	NA	NA	NA	NA	KTN1-AS1	2766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr14	57047832	57047974	57047932	Y	PELI2,C14orf101	NA	NA	NA	NA	NA	PELI2	465300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	58637905	58638297	58638125	Y	NA	UBA52P3,ACTR10	NA	NA	NA	NA	ACTR10	26501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	58726838	58727438	58727133	Y	NA	PSMA3,RP11-349A22.5,C14orf37,ARID4A	NA	NA	NA	NA	PSMA3	17289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	58911911	58912089	58912000	Y	KIAA0586	KIAA0586,TIMM9	NA	NA	NA	NA	TIMM9	19579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr14	59002332	59002438	59002384	Y	NA	NA	NA	NA	NA	NA	TIMM9	110000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	59628600	59628806	59628703	Y	NA	DAAM1	DAAM1,KIAA0586,GPR135	IMR90	Hi-C	24141950	DAAM1	24558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	59656513	59656908	59656842	Y	DAAM1	DAAM1	NA	NA	NA	NA	DAAM1	3149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	59742406	59742712	59742574	Y	DAAM1	NA	NA	NA	NA	NA	DAAM1	89042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	59744882	59745126	59745004	Y	NA	NA	NA	NA	NA	NA	DAAM1	91518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	59861080	59861273	59861260	Y	DAAM1,RTN1	NA	DAAM1	IMR90	Hi-C	24141950	GPR135	68787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	59949393	59949731	59949550	Y	C14orf149	GPR135,JKAMP	NA	NA	NA	NA	JKAMP	232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	60388442	60388458	60388449	Y	NA	NA	NA	NA	NA	NA	RTN1	52758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	60679186	60679974	60679676	Y	NA	DHRS7,PPM1A,CTD-2184C24.2	NA	NA	NA	NA	PPM1A	30496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.455745860664985
chr14	61188145	61188381	61188263	Y	NA	SIX4,MNAT1	NA	NA	NA	NA	SIX4	685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	61188472	61188761	61188676	Y	PPM1A	SIX4,MNAT1	NA	NA	NA	NA	SIX4	305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr14	61456427	61456721	61456474	Y	SLC38A6	RP11-193F5.4,SLC38A6,TRMT5	NA	NA	NA	NA	TRMT5	10351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	61547219	61547605	61547412	Y	NA	NA	NA	NA	NA	NA	TRMT5	101143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	61570265	61570959	61570637	Y	SLC38A6	NA	NA	NA	NA	NA	TRMT5	124189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr14	61571196	61571403	61571326	Y	SLC38A6	NA	NA	NA	NA	NA	TRMT5	125120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	61645426	61645731	61645594	Y	NA	NA	SLC38A6,SIX1,MNAT1,TRMT5,SIX4	IMR90	Hi-C	24141950	TRMT5	199350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	61938268	61939375	61939158	Y	HIF1A	NA	NA	NA	NA	NA	RP11-47I22.3	95883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	61960014	61960497	61960231	Y	PRKCH,HIF1A	NA	NA	NA	NA	NA	RP11-47I22.3	74761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	61993702	61994099	61993768	Y	NA	RP11-47I22.3	NA	NA	NA	NA	RP11-47I22.3	41159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	62026213	62026731	62026533	Y	NA	RP11-47I22.3	NA	NA	NA	NA	RP11-47I22.3	8527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.827508174960302
chr14	62069550	62069793	62069672	Y	NA	RP11-47I22.3	NA	NA	NA	NA	RP11-47I22.3	34292	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr14	63159002	63159168	63159087	Y	NA	NA	NA	NA	NA	NA	RHOJ	509664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	63983921	63984319	63984190	Y	NA	PPP2R5E	NA	NA	NA	NA	PPP2R5E	23773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	64109095	64109326	64109156	Y	SYNE2,WDR89,WDR89	HSPE1P2,WDR89	NA	NA	NA	NA	WDR89	2516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	64170371	64170528	64170450	Y	NA	SGPP1	NA	NA	NA	NA	SGPP1	22229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	64185455	64185764	64185678	Y	PPP2R5E,SYNE2,WDR89,WDR89,SGPP1	SGPP1,RP11-804M7.2	NA	NA	NA	NA	SGPP1	6993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	64320785	64320937	64320842	Y	PPP2R5E,WDR89,WDR89,SYNE2,SYNE2	SYNE2	NA	NA	NA	NA	SYNE2	3102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	64403874	64404095	64403883	Y	NA	NA	NA	NA	NA	NA	SYNE2	86191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	64705009	64705329	64705170	Y	PLEKHG3,SYNE2	NA	NA	NA	NA	NA	RP11-544I20.2	97988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	64975156	64975343	64975202	Y	NA	AKAP5,ZBTB1,ZBTB25,HSPA2	NA	NA	NA	NA	ZBTB25	5225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	65115289	65115345	65115316	Y	NA	NA	ZBTB25,ZBTB1,SPTB,PLEKHG3,CHURC1-FNTB,MTHFD1,PPP1R36,HSPA2	IMR90	Hi-C	24141950	PLEKHG3	53475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	65147051	65147198	65147125	Y	NA	PLEKHG3	SPTB,PPP1R36,PLEKHG3,CHURC1-FNTB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PLEKHG3	21622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	65148642	65149174	65148980	Y	HSPA2,FNTB	PLEKHG3	SPTB,PPP1R36,PLEKHG3,CHURC1-FNTB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PLEKHG3	19646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	65525721	65526064	65525893	Y	NA	MAX	NA	NA	NA	NA	MAX	41349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	65637410	65637773	65637587	Y	NA	NA	LOC645431,FUT8,MIR4708	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAX	69997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	65691594	65691779	65691731	Y	NA	NA	FUT8,LOC645431,MIR4708	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2509G16.5	91729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	65705173	65705467	65705275	Y	NA	NA	LOC645431,FUT8,MIR4708	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2509G16.5	78041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr14	65705887	65706189	65706012	Y	NA	NA	LOC645431,FUT8,MIR4708	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2509G16.5	77319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	65710565	65711133	65711131	Y	NA	NA	LOC645431,FUT8	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2509G16.5	72375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	65722117	65722532	65722424	Y	NA	NA	LOC645431,FUT8,MIR4708	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2509G16.5	60976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr14	65746592	65747003	65746788	Y	NA	CTD-2509G16.5	LOC645431,FUT8,MIR4708	IMR90	Hi-C	24141950	CTD-2509G16.5	36505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr14	66126309	66126626	66126333	Y	NA	NA	NA	NA	NA	NA	FUT8	250999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr14	66856568	66856818	66856763	Y	GPHN	NA	NA	NA	NA	NA	GPHN	115307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	67416708	67417057	67416792	Y	GPHN	NA	NA	NA	NA	NA	MPP5	288769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	67478288	67478352	67478320	Y	NA	NA	NA	NA	NA	NA	MPP5	227474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	67562927	67563276	67562937	Y	TMEM229B,PLEKHH1	NA	NA	NA	NA	NA	MPP5	142550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	67735210	67735475	67735304	Y	NA	MPP5	NA	NA	NA	NA	MPP5	29384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	67751261	67751573	67751281	Y	RDH12,PLEKHH1,PIGH	MPP5	NA	NA	NA	NA	MPP5	45435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	67774949	67775062	67775003	Y	PLEKHH1	EIF2S1,ATP6V1D	NA	NA	NA	NA	EIF2S1	49652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr14	67809024	67809296	67809169	Y	RDH12,MPP5,PLEKHH1	EIF2S1,ATP6V1D	NA	NA	NA	NA	EIF2S1	15418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	67998625	67999040	67998762	Y	NA	PLEKHH1	NA	NA	NA	NA	PLEKHH1	607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	68161499	68161767	68161616	Y	PLEK2	VTI1B,RDH11,RDH12	NA	NA	NA	NA	RDH11	968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.751740748792891
chr14	68320437	68320759	68320587	Y	ZFYVE26	ZFYVE26,RAD51B	NA	NA	NA	NA	RAD51B	35941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	68408350	68408505	68408421	Y	NA	NA	NA	NA	NA	NA	RAD51B	123854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	68431145	68431760	68431180	Y	NA	NA	NA	NA	NA	NA	RAD51B	146649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr14	68555905	68556402	68556038	Y	PIGH	NA	NA	NA	NA	NA	RAD51B	271409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	68604521	68604895	68604639	Y	NA	NA	NA	NA	NA	NA	PPIAP6	282018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	68607037	68607479	68607161	Y	NA	NA	NA	NA	NA	NA	PPIAP6	279434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	68644384	68644906	68644390	Y	NA	NA	NA	NA	NA	NA	PPIAP6	242007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	68658646	68658820	68658748	Y	NA	NA	NA	NA	NA	NA	PPIAP6	228093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	68844207	68844566	68844276	Y	NA	PPIAP6	NA	NA	NA	NA	PPIAP6	42347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	68864511	68864831	68864664	Y	NA	PPIAP6	NA	NA	NA	NA	PPIAP6	22082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	68884830	68884917	68884875	Y	NA	PPIAP6	NA	NA	NA	NA	PPIAP6	1996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	68925660	68925982	68925837	Y	NA	PPIAP6	NA	NA	NA	NA	PPIAP6	38747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	68987766	68987894	68987825	Y	NA	NA	NA	NA	NA	NA	PPIAP6	100853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	68989370	68989709	68989577	Y	NA	NA	NA	NA	NA	NA	PPIAP6	102457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr14	69014304	69014714	69014453	Y	ACTN1	NA	NA	NA	NA	NA	PPIAP6	127391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69065409	69066172	69065453	Y	ZFP36L1	NA	NA	NA	NA	NA	CTD-2325P2.3	84110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr14	69076965	69077322	69077310	Y	NA	NA	NA	NA	NA	NA	CTD-2325P2.3	72960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69162018	69162337	69162187	Y	NA	CTD-2325P2.3	ZFP36L1,RAD51B	IMR90	Hi-C	24141950	CTD-2325P2.3	11736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	69169939	69170184	69170014	Y	NA	CTD-2325P2.3	ZFP36L1,RAD51B	IMR90	Hi-C	24141950	CTD-2325P2.3	19657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	69241519	69241814	69241672	Y	NA	ZFP36L1	NA	NA	NA	NA	ZFP36L1	19376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69246726	69246992	69246942	Y	DCAF5	ZFP36L1	NA	NA	NA	NA	ZFP36L1	14198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.645735333717372
chr14	69247587	69247770	69247677	Y	DCAF5,ZFP36L1	ZFP36L1	NA	NA	NA	NA	ZFP36L1	13420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	69247986	69248278	69248131	Y	DCAF5	ZFP36L1	NA	NA	NA	NA	ZFP36L1	12912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69251306	69251504	69251405	Y	NA	ZFP36L1	NA	NA	NA	NA	ZFP36L1	9686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.306679960522312
chr14	69252204	69252483	69252314	Y	NA	ZFP36L1	NA	NA	NA	NA	ZFP36L1	8707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69281323	69281785	69281441	Y	DCAF5	ZFP36L1	RAD51B,ZFYVE26	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZFP36L1	20133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	69289049	69289309	69289164	Y	NA	ZFP36L1	RAD51B,ZFYVE26,ZFP36L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZFP36L1	27859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69425235	69425583	69425528	Y	NA	ACTN1	NA	NA	NA	NA	ACTN1	18574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	69576488	69576915	69576681	Y	NA	DCAF5	NA	NA	NA	NA	DCAF5	40952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	69598076	69598493	69598218	Y	NA	DCAF5	NA	NA	NA	NA	DCAF5	19374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	69618210	69618757	69618360	Y	NA	DCAF5,EXD2	NA	NA	NA	NA	DCAF5	343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr14	69851262	69851639	69851451	Y	NA	SLC39A9,ERH	NA	NA	NA	NA	SLC39A9	11093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	69867695	69867997	69867846	Y	NA	SLC39A9,ERH	NA	NA	NA	NA	ERH	4351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	69913588	69913836	69913761	Y	NA	NA	NA	NA	NA	NA	ERH	50244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	70110235	70110559	70110279	Y	DCAF5,SRSF5,SRSF5,KIAA0247	KIAA0247	NA	NA	NA	NA	KIAA0247	33922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	70152055	70152259	70152141	Y	KIAA0247,SRSF5,SRSF5	SRSF5	NA	NA	NA	NA	SRSF5	39358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	70447892	70448065	70447949	Y	SMOC1	NA	NA	NA	NA	NA	SMOC1	129044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	70464665	70464959	70464731	Y	NA	NA	NA	NA	NA	NA	SMOC1	145817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	70803999	70804244	70804143	Y	NA	COX16	NA	NA	NA	NA	COX16	20204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	70844763	70845165	70845114	Y	NA	COX16,SYNJ2BP-COX16,SYNJ2BP	NA	NA	NA	NA	COX16	20315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	71022218	71022570	71022394	Y	ADAM20	MED6	NA	NA	NA	NA	MED6	42814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	71797093	71797681	71797289	Y	PCNX	SIPA1L1,RP1-261D10.2	SIPA1L1,LOC145474	IMR90	Hi-C	24141950	RP1-261D10.2	10562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	71865475	71866239	71865922	Y	PCNX,SIPA1L1	NA	NA	NA	NA	NA	RP1-261D10.2	78944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	72083404	72083762	72083537	Y	NA	NA	NA	NA	NA	NA	RP1-261D10.2	296873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	73373247	73373392	73373372	Y	NA	DPF3,DCAF4,RP1-146I3.1	RGS6,DPF3,DCAF4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	DPF3	14438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	73585185	73585324	73585255	Y	NA	PSEN1	NA	NA	NA	NA	PSEN1	15802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr14	73824884	73825148	73825019	Y	ZFYVE1,ZFYVE1,RBM25,PSEN1,NUMB	NA	NA	NA	NA	NA	RP1-240K6.3	101981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	74224982	74225468	74225101	Y	NA	PNMA1,RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	26595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	74229197	74229543	74229334	Y	NUMB,ZNF410,C14orf43	RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	22520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	74235090	74235238	74235164	Y	C14orf43	RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	16825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	74238517	74238805	74238733	Y	C14orf169,ZNF410,COQ6,COQ6,C14orf43,C14orf43	RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	13258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	74252099	74252503	74252342	Y	NA	RP5-1021I20.1	NA	NA	NA	NA	RP5-1021I20.1	36	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr14	74741846	74742137	74741995	Y	FCF1	ABCD4	NA	NA	NA	NA	ABCD4	25622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	74949377	74949710	74949544	Y	NA	MIR4709,ISCA2,NPC2	NA	NA	NA	NA	MIR4709	4470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	75037027	75037351	75037159	Y	NA	LTBP2,CTD-2207P18.2	NA	NA	NA	NA	LTBP2	39955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	75038441	75039020	75038725	Y	NPC2,DLST	LTBP2,CTD-2207P18.2	NA	NA	NA	NA	LTBP2	38286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	75086409	75086922	75086553	Y	PGF	LTBP2,CTD-2207P18.2	LTBP2,KIAA0317,FCF1,YLPM1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTD-2207P18.2	5059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	75087327	75087770	75087539	Y	PGF,EIF2B2,LTBP2	LTBP2,CTD-2207P18.2	YLPM1,NPC2,ISCA2,LTBP2,KIAA0317,FCF1	IMR90	Hi-C	24141950	CTD-2207P18.2	5977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	75423365	75423745	75423623	Y	NA	RPS6KL1,PGF,EIF2B2	NA	NA	NA	NA	PGF	2878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr14	75448208	75448549	75448379	Y	NA	PGF,EIF2B2	MLH3,ZC2HC1C,NEK9,PGF,EIF2B2,ACYP1,RPS6KL1,DLST	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	EIF2B2	19065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	75592667	75593037	75593004	Y	NA	RP11-950C14.7,NEK9,TMED10	NA	NA	NA	NA	NEK9	620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr14	75638580	75638649	75638615	Y	NA	RP11-950C14.7,NEK9,TMED10	NA	NA	NA	NA	TMED10	2685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	75649674	75650038	75649826	Y	FOS	TMED10	TMED10,LOC731223,FOS,RPS6KL1,NEK9	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	TMED10	8340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	75761897	75762132	75762064	Y	FOS,JDP2,JDP2,JDP2,FLVCR2,FLVCR2	RP11-293M10.2,FOS,RP11-293M10.5	NA	NA	NA	NA	RP11-293M10.5	2790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	75768536	75769006	75768683	Y	NA	RP11-293M10.2,FOS,RP11-293M10.5	NA	NA	NA	NA	RP11-293M10.5	9429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	76076330	76076878	76076479	Y	BATF,FLVCR2,FLVCR2	FLVCR2,RP11-507E23.1,TTLL5,C14orf1	NA	NA	NA	NA	RP11-507E23.1	15781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	76234838	76235006	76234846	Y	NA	NA	TGFB3,IFT43	IMR90	Hi-C	24141950	C14orf1	109306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	76343734	76343966	76343850	Y	NA	NA	NA	NA	NA	NA	TGFB3	103368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	76446236	76446389	76446309	Y	NA	TGFB3	NA	NA	NA	NA	TGFB3	945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	76734272	76734379	76734290	Y	ESRRB	NA	NA	NA	NA	NA	TGFB3	286938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	76843326	76843356	76843341	Y	NA	NA	NA	NA	NA	NA	RP11-187O7.1	256648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	77277377	77277692	77277535	Y	C14orf166B	ANGEL1	VASH1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANGEL1	12897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	77422240	77422571	77422458	Y	VASH1,C14orf166B,IRF2BPL	RP11-7F17.7,RP11-7F17.1	IRF2BPL,KIAA1737	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-7F17.7	1410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	77425025	77425260	77425132	Y	C14orf166B,IRF2BPL	RP11-7F17.7,RP11-7F17.1	IRF2BPL	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-7F17.7	1044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.240774963756723
chr14	77427398	77427552	77427469	Y	C14orf166B,IRF2BPL	RP11-7F17.7,RP11-7F17.1	IRF2BPL	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-7F17.7	3417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	77428060	77428442	77428341	Y	NA	RP11-7F17.7,RP11-7F17.1	IRF2BPL	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	RP11-7F17.7	4079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr14	77489818	77490087	77489881	Y	NA	IRF2BPL	NA	NA	NA	NA	IRF2BPL	2947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	77495718	77495873	77495815	Y	NA	IRF2BPL	NA	NA	NA	NA	IRF2BPL	2684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	77499482	77500543	77500476	Y	VASH1,C14orf166B,IRF2BPL	IRF2BPL	KIAA1737,POMT2,GSTZ1	MCF7	ChIA-PET	22265404	IRF2BPL	6448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	77500544	77500911	77500765	Y	NA	IRF2BPL	KIAA1737,POMT2,GSTZ1	MCF7	ChIA-PET	22265404	IRF2BPL	7510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	77509664	77510215	77509840	Y	IRF2BPL	IRF2BPL	IRF2BPL	IMR90	Hi-C	24141950	IRF2BPL	16630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18144131281542
chr14	77591216	77591790	77591612	Y	TMED8,NGB	TMEM63C,ZDHHC22	NA	NA	NA	NA	TMEM63C	10305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	77640033	77640278	77640160	Y	NA	ZDHHC22	C14orf166B,ZDHHC22,POMT2,GSTZ1,KIAA1737,TMEM63C,NGB,MIR1260A,TMED8	IMR90	Hi-C	24141950	ZDHHC22	32956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	77826239	77826291	77826265	Y	NA	GSTZ1,POMT2,SAMD15,TMED8	NA	NA	NA	NA	SAMD15	14741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	77871382	77871440	77871411	Y	NA	SAMD15,TMED8	NA	NA	NA	NA	TMED8	29930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	78031949	78032369	78032266	Y	SNW1,SPTLC2	SPTLC2	NA	NA	NA	NA	SPTLC2	48747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	78196199	78196534	78196363	Y	NA	ALKBH1,SLIRP,C14orf178,SNW1	NA	NA	NA	NA	SLIRP	23785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	81375179	81375565	81375372	Y	STON2,CEP128	CEP128	NA	NA	NA	NA	CEP128	48296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	81685513	81686063	81685724	Y	GTF2A1,GTF2A1	SNORA79,DYNLL1P1	NA	NA	NA	NA	GTF2A1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.3952493833265
chr14	84176891	84176909	84176900	Y	NA	NA	NA	NA	NA	NA	SEL1L	2178686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	88494121	88494511	88494316	Y	NA	LINC01146	NA	NA	NA	NA	LINC01146	5227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	88495900	88496012	88495956	Y	GALC,GPR65	LINC01146	NA	NA	NA	NA	LINC01146	7006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	88507103	88507530	88507199	Y	GALC	LINC01146	NA	NA	NA	NA	LINC01146	18209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	88514856	88514945	88514901	Y	NA	LINC01146	NA	NA	NA	NA	LINC01146	25962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	88531180	88531607	88531441	Y	KCNK10	LINC01146	NA	NA	NA	NA	LINC01146	42286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89493430	89493694	89493607	Y	NA	NA	EFCAB11,FOXN3,TDP1,LOC400236,PRO1768,EML5,TTC8	IMR90	Hi-C	24141950	TTC8	204933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	89498515	89498671	89498581	Y	ZC3H14	NA	EFCAB11,FOXN3,TDP1,LOC400236,PRO1768,EML5,TTC8	IMR90	Hi-C	24141950	TTC8	210018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89630928	89631154	89631021	Y	FOXN3	NA	NA	NA	NA	NA	CAP2P1	124784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89669833	89670012	89669951	Y	FOXN3	NA	NA	NA	NA	NA	CAP2P1	85926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89671493	89671906	89671673	Y	NA	NA	NA	NA	NA	NA	CAP2P1	84032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	89680457	89680908	89680785	Y	FOXN3	NA	NA	NA	NA	NA	CAP2P1	75030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	89739645	89739700	89739695	Y	NA	CAP2P1	NA	NA	NA	NA	CAP2P1	16238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89742753	89743028	89742926	Y	NA	CAP2P1	NA	NA	NA	NA	CAP2P1	12910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89772713	89772723	89772718	Y	NA	CAP2P1	NA	NA	NA	NA	CAP2P1	16775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89881748	89882141	89882044	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	CAP2P1	125810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.508337246706453
chr14	89887223	89887427	89887324	Y	NA	NA	NA	NA	NA	NA	CAP2P1	131285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	89895882	89896217	89896119	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	CAP2P1	139944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89925437	89925732	89925559	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	FOXN3	157761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	89927678	89927888	89927807	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	FOXN3	155605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	89953485	89953641	89953575	Y	FOXN3,FOXN3	NA	NA	NA	NA	NA	FOXN3	129852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	89959649	89959712	89959681	Y	TDP1,FOXN3	NA	NA	NA	NA	NA	FOXN3	123781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	90083286	90083622	90083526	Y	TDP1,FOXN3	NA	NA	NA	NA	NA	FOXN3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr14	90083771	90084428	90084236	Y	TDP1,FOXN3	FOXN3	NA	NA	NA	NA	FOXN3	278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr14	90168731	90169025	90168878	Y	NA	NA	FOXN3,LOC400236,PRO1768,EFCAB11	IMR90	Hi-C	24141950	FOXN3	85238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	90378074	90378289	90378205	Y	FOXN3,FOXN3,TDP1	EFCAB11,TDP1	NA	NA	NA	NA	EFCAB11	40832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	90957919	90958167	90958043	Y	NA	NA	NA	NA	NA	NA	CALM1	97073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	91071271	91071425	91071348	Y	TTC7B,RPS6KA5,CALM1	NA	NA	NA	NA	NA	TTC7B	209398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	91090658	91091172	91090732	Y	NA	NA	NA	NA	NA	NA	TTC7B	189651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	91730791	91731194	91731191	Y	NA	NA	GPR68	K562	ChIA-PET	22265404	CCDC88C	150994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	91752749	91752962	91752855	Y	NA	NA	NA	NA	NA	NA	CCDC88C	129226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	91814664	91814951	91814783	Y	RPS6KA5,C14orf159,SMEK1,CCDC88C	NA	NA	NA	NA	NA	CCDC88C	67237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	91827435	91827790	91827659	Y	RPS6KA5,SMEK1,CCDC88C	NA	NA	NA	NA	NA	CCDC88C	54398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr14	91880070	91880210	91880118	Y	TC2N,RPS6KA5,C14orf159,SMEK1,CCDC88C	CCDC88C	NA	NA	NA	NA	CCDC88C	1978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	92451454	92451633	92451538	Y	SMEK1,SLC24A4,SLC24A4,ATXN3	FBLN5	NA	NA	NA	NA	FBLN5	39123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	92572132	92572295	92572249	Y	CATSPERB,SLC24A4,SLC24A4,RIN3,ATXN3	ATXN3,NDUFB1,CPSF2	NA	NA	NA	NA	ATXN3	1167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	92574762	92574984	92574843	Y	NA	ATXN3,NDUFB1,CPSF2	NA	NA	NA	NA	ATXN3	3797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.107651212667887
chr14	92938458	92938502	92938481	Y	NA	RIN3	RIN3	IMR90	Hi-C	24141950	RIN3	39616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	92939984	92940195	92940107	Y	ATXN3,SLC24A4,SLC24A4,RIN3	RIN3	RIN3	IMR90	Hi-C	24141950	RIN3	37923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	92970203	92970533	92970302	Y	ATXN3,SLC24A4,SLC24A4,RIN3	RIN3	NA	NA	NA	NA	RIN3	7585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314896592331768
chr14	93044640	93044810	93044725	Y	NA	NA	NA	NA	NA	NA	RIN3	66522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	93114264	93114489	93114415	Y	ITPK1,SLC24A4,SLC24A4,RIN3	NA	NA	NA	NA	NA	LGMN	98558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	93499320	93499712	93499545	Y	NA	NA	NA	NA	NA	NA	ITPK1	80953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	93509801	93510236	93510094	Y	NA	NA	NA	NA	NA	NA	ITPK1	70429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr14	93510584	93510744	93510686	Y	NA	NA	NA	NA	NA	NA	ITPK1	69921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	93511721	93512085	93511905	Y	NA	NA	NA	NA	NA	NA	ITPK1	68580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr14	93540322	93540650	93540529	Y	NA	ITPK1	NA	NA	NA	NA	ITPK1	40015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	93776910	93777138	93777024	Y	PRIMA1	BTBD7	NA	NA	NA	NA	BTBD7	20300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	94453312	94453802	94453544	Y	NA	ASB2,OTUB2	LINC00521	MCF7	ChIA-PET	22265404	ASB2	12175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	94471808	94471845	94471827	Y	NA	ASB2,OTUB2	NA	NA	NA	NA	OTUB2	18830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	94735054	94735340	94735197	Y	NA	SERPINA10	NA	NA	NA	NA	SERPINA10	22268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	94748201	94748526	94748499	Y	SERPINA6,SERPINA5,SERPINA4,SERPINA3,SERPINA11,SERPINA1,SERPINA10,SERPINA10	SERPINA10,SERPINA6	NA	NA	NA	NA	SERPINA10	9082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr14	94808145	94809286	94808819	Y	SERPINA1	SERPINA6,SERPINA1	NA	NA	NA	NA	SERPINA6	20414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	94813306	94813452	94813405	Y	NA	SERPINA6,SERPINA1	NA	NA	NA	NA	SERPINA6	25575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	94851152	94851609	94851362	Y	SERPINA1	SERPINA1	NA	NA	NA	NA	SERPINA1	3421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr14	94860948	94861396	94861133	Y	SERPINA1	SERPINA1	SERPINA1	IMR90	Hi-C	24141950	SERPINA1	5918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr14	94862196	94862528	94862354	Y	SERPINA11,SERPINA1	SERPINA1	SERPINA1	IMR90	Hi-C	24141950	SERPINA1	7166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.180127043650563
chr14	95060330	95060702	95060482	Y	SERPINA10,SERPINA10,SERPINA6,SERPINA1,SERPINA11,SERPINA4,SERPINA5,SERPINA3	SERPINA4,SERPINA5,SERPINA3	NA	NA	NA	NA	SERPINA3	16012	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.90532221465164
chr14	95064751	95064770	95064761	Y	SERPINA10,SERPINA10,SERPINA6,SERPINA1,SERPINA11,SERPINA12,SERPINA4,SERPINA5,SERPINA3	SERPINA4,SERPINA5,SERPINA3	NA	NA	NA	NA	SERPINA3	11944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr14	95065322	95065753	95065523	Y	SERPINA10,SERPINA10,SERPINA6,SERPINA1,SERPINA11,SERPINA4,SERPINA5,SERPINA3	SERPINA4,SERPINA5,SERPINA3	NA	NA	NA	NA	SERPINA3	10961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr14	95066800	95067322	95067074	Y	SERPINA10,SERPINA10,SERPINA6,SERPINA1,SERPINA11,SERPINA4,SERPINA5,SERPINA3	SERPINA4,SERPINA5,SERPINA3	NA	NA	NA	NA	SERPINA3	9392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr14	95068378	95068532	95068464	Y	NA	SERPINA4,SERPINA5,SERPINA3	NA	NA	NA	NA	SERPINA3	8182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	95596986	95597082	95597060	Y	NA	DICER1	NA	NA	NA	NA	DICER1	25265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	95610253	95610413	95610333	Y	CLMN,DICER1,DICER1	DICER1	NA	NA	NA	NA	DICER1	11934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	95677984	95678067	95678026	Y	NA	NA	NA	NA	NA	NA	DICER1	55637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	95691488	95691499	95691495	Y	NA	NA	NA	NA	NA	NA	DICER1	69141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	95731733	95732288	95732036	Y	DICER1,CLMN	NA	NA	NA	NA	NA	CLMN	51955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr14	95734707	95735043	95734878	Y	NA	CLMN	NA	NA	NA	NA	CLMN	49200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	95758765	95759186	95759057	Y	CLMN	CLMN	NA	NA	NA	NA	CLMN	25057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	95946356	95946810	95946552	Y	NA	RP11-1070N10.3	NA	NA	NA	NA	RP11-1070N10.3	33663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr14	95984814	95985165	95984990	Y	NA	RP11-1070N10.3,GLRX5,SCARNA13,SNHG10	NA	NA	NA	NA	RP11-1070N10.3	4341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	95992355	95992583	95992552	Y	NA	RP11-1070N10.3,GLRX5,SCARNA13,SNHG10	NA	NA	NA	NA	GLRX5	5257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	99439262	99439638	99439565	Y	NA	NA	NA	NA	NA	NA	SETD3	505578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.237815408606697
chr14	99657940	99658586	99658223	Y	C14orf177,BCL11B	NA	NA	NA	NA	NA	SETD3	286630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	99739493	99739630	99739557	Y	BCL11B	NA	NA	NA	NA	NA	SETD3	205586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	99827366	99827674	99827539	Y	NA	NA	NA	NA	NA	NA	SETD3	117542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	99934490	99934508	99934499	Y	EML1	SETD3,CCNK	NA	NA	NA	NA	SETD3	10708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	100040610	100041006	100040947	Y	SETD3,CCDC85C	CCDC85C,RP11-543C4.1	NA	NA	NA	NA	CCDC85C	27357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	100068632	100068970	100068687	Y	NA	CCDC85C,HHIPL1	NA	NA	NA	NA	RP11-543C4.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.331661384378189
chr14	100071651	100072022	100071781	Y	NA	CCDC85C,RP11-543C4.1,HHIPL1	NA	NA	NA	NA	RP11-543C4.1	2758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr14	100196933	100197043	100196991	Y	NA	CYP46A1,EML1	NA	NA	NA	NA	EML1	4987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr14	100495518	100495795	100495680	Y	NA	NA	EVL,YY1,DEGS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DEGS2	128705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	100539339	100539601	100539490	Y	WARS,EVL	NA	NA	NA	NA	NA	DEGS2	84899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	100633368	100633655	100633513	Y	YY1	DEGS2	NA	NA	NA	NA	DEGS2	8868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	100659173	100659604	100659490	Y	NA	DEGS2,YY1,RP11-638I2.4	DEGS2,YY1,EVL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	DEGS2	34673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr14	100687969	100688087	100687996	Y	NA	YY1,RP11-638I2.4	YY1	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	YY1	14548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.274464645594328
chr14	100751761	100751840	100751790	Y	NA	YY1,RP11-638I2.4,SLC25A29,SLC25A47	NA	NA	NA	NA	SLC25A29	19044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.23650113944184
chr14	100804523	100804880	100804765	Y	NA	SLC25A29,SLC25A47,RP11-638I2.10,WDR25,WARS	NA	NA	NA	NA	SLC25A47	16849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	101143693	101144188	101144055	Y	NA	DLK1	NA	NA	NA	NA	DLK1	45854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr14	101147038	101147458	101147200	Y	NA	DLK1	NA	NA	NA	NA	DLK1	42584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	101151381	101151698	101151540	Y	RTL1,DLK1	DLK1	NA	NA	NA	NA	DLK1	38344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	101159258	101159870	101159708	Y	NA	DLK1	NA	NA	NA	NA	DLK1	30172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr14	101237616	101237781	101237733	Y	NA	DLK1	WDR25,LINC00523,DLK1	IMR90	Hi-C	24141950	DLK1	47574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr14	101283054	101283176	101283121	Y	NA	NA	NA	NA	NA	NA	DLK1	93012	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.06581469813207
chr14	101288434	101288543	101288490	Y	NA	NA	NA	NA	NA	NA	DLK1	98392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.788230399642958
chr14	102001660	102001854	102001726	Y	PPP2R5C,PPP2R5C,DYNC1H1	DIO3OS	NA	NA	NA	NA	DIO3OS	22914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	102089844	102089938	102089891	Y	NA	NA	MEG8,LINC00523,MIR381,MIR376C,MIR654,MIR1185-1,MIR539,MIR376B,MIR495,MIR889,MIR1185-2,MIR300,MIR376A2,MIR376A1,MIR655,MIR487B	IMR90	Hi-C	24141950	DIO3OS	65076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	102173765	102174142	102173896	Y	NA	RP11-1029J19.5	PPP2R5C,DYNC1H1,LINC00239	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-1029J19.5	21303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	102188292	102188876	102188640	Y	WDR20,PPP2R5C,PPP2R5C	RP11-1029J19.5,PPP2R5C	LINC00239	K562	ChIA-PET	22265404	RP11-1029J19.5	6569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	102227271	102227509	102227387	Y	WDR20,PPP2R5C,PPP2R5C	RP11-1029J19.5,PPP2R5C	NA	NA	NA	NA	PPP2R5C	1136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr14	102277268	102277494	102277347	Y	PPP2R5C,WDR20,DYNC1H1,PPP2R5C	NA	NA	NA	NA	NA	PPP2R5C	51133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	102414226	102414964	102414565	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13901	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.89018272067532
chr14	102415545	102415736	102415629	Y	NA	DYNC1H1	NA	NA	NA	NA	DYNC1H1	13129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	102554875	102555215	102555129	Y	HSP90AA1	WDR20,HSP90AA1	NA	NA	NA	NA	WDR20	48625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	102780583	102780765	102780709	Y	NA	MOK,ZNF839,CINP,TECPR2	MOK,DYNC1H1,HSP90AA1,WDR20,ZNF839	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZNF839	949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr14	102977207	102977381	102977329	Y	AMN	ANKRD9,CTD-2555C10.3	NA	NA	NA	NA	ANKRD9	3071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr14	102991046	102991386	102991124	Y	NA	ANKRD9,CTD-2555C10.3	ANKRD9,RCOR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANKRD9	16910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.506200334549011
chr14	102991831	102991939	102991900	Y	NA	ANKRD9,CTD-2555C10.3	ANKRD9,RCOR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2555C10.3	17652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr14	103051810	103052039	103051996	Y	NA	CTD-2555C10.3,RCOR1	TECPR2,TRAF3,RCOR1,AMN	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RCOR1	4959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	103112299	103112666	103112355	Y	NA	NA	NA	NA	NA	NA	RCOR1	55301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	103221108	103221258	103221164	Y	NA	TRAF3	NA	NA	NA	NA	TRAF3	20555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	103266656	103267057	103266785	Y	NA	TRAF3	CDC42BPB,AMN	IMR90	Hi-C	24141950	TRAF3	24843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	103299136	103299384	103299260	Y	NA	NA	NA	NA	NA	NA	TRAF3	57323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	103537585	103537989	103537775	Y	NA	CDC42BPB,RP11-736N17.8	CDC42BPB,EIF5	MCF7	ChIA-PET	22265404	CDC42BPB	15786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	103540554	103540738	103540645	Y	NA	CDC42BPB,RP11-736N17.8	CDC42BPB,EIF5	MCF7	ChIA-PET	22265404	RP11-736N17.8	18322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr14	103541337	103541574	103541446	Y	NA	CDC42BPB,RP11-736N17.8	CDC42BPB,EIF5	MCF7	ChIA-PET	22265404	RP11-736N17.8	17486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr14	103557952	103558007	103557980	Y	NA	CDC42BPB,RP11-736N17.8	CDC42BPB,EXOC3L4,TNFAIP2,EIF5,LOC100131366,MARK3	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-736N17.8	1053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	103575159	103575514	103575439	Y	MARK3,BAG5,BAG5,TRAF3,EIF5,EIF5,TNFAIP2	RP11-736N17.8	NA	NA	NA	NA	RP11-736N17.8	16099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr14	103710310	103710630	103710449	Y	NA	NA	LOC100131366,EIF5,TNFAIP2,CDC42BPB,RCOR1,EXOC3L4	IMR90	Hi-C	24141950	EIF5	87251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.576379155629484
chr14	104315137	104315546	104315446	Y	NA	PPP1R13B	NA	NA	NA	NA	PPP1R13B	3210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr14	104356058	104356494	104356205	Y	TRMT61A,PPP1R13B	PPP1R13B,C14orf2	PPP1R13B,LOC145216	MCF7	ChIA-PET	22265404	C14orf2	36112	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.14289588185714
chr14	104483678	104483886	104483733	Y	ZFYVE21	NA	NA	NA	NA	NA	C14orf2	91072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	104601589	104601707	104601649	Y	NA	NA	NA	NA	NA	NA	C14orf2	208983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	105132512	105132664	105132612	Y	TMEM179,INF2	RP11-982M15.6,INF2	NA	NA	NA	NA	RP11-982M15.6	12819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.801372579684332
chr14	105148231	105148612	105148591	Y	INF2	RP11-982M15.6,INF2,ADSSL1	NA	NA	NA	NA	RP11-982M15.6	2748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	105154013	105154712	105154273	Y	ADSSL1	RP11-982M15.6,INF2,ADSSL1	NA	NA	NA	NA	INF2	70	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr14	105201949	105202125	105202062	Y	ADSSL1	INF2,ADSSL1,SIVA1	NA	NA	NA	NA	ADSSL1	13426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.884865011488926
chr14	105265888	105266206	105266005	Y	NA	SIVA1,AKT1,RPS26P49	NA	NA	NA	NA	AKT1	5800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr14	105290315	105290696	105290451	Y	GPR132	AKT1,RPS26P49	NA	NA	NA	NA	RPS26P49	4812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	105294003	105294327	105294166	Y	NA	AKT1,RPS26P49	NA	NA	NA	NA	RPS26P49	1181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr14	105327046	105327788	105327205	Y	NA	RPS26P49	NA	NA	NA	NA	RPS26P49	31538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.421393633579559
chr14	105330138	105330246	105330192	Y	NA	RPS26P49	NA	NA	NA	NA	RPS26P49	34630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr14	105438668	105438757	105438725	Y	KIAA0284,JAG2,CDCA4,C14orf79,AHNAK2	AHNAK2,C14orf79,CDCA4	NA	NA	NA	NA	AHNAK2	3937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	105493379	105493756	105493698	Y	NA	C14orf79,CDCA4	NA	NA	NA	NA	CDCA4	7894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr14	105557924	105558306	105558075	Y	NA	NA	BTBD6,BRF1,JAG2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CDCA4	72439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr14	105665519	105665885	105665604	Y	NA	JAG2,NUDT14	NA	NA	NA	NA	NUDT14	19859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr14	105760670	105760918	105760811	Y	C14orf80,C14orf80,C14orf80,GPR132,BRF1	PACS2,BRF1	NA	NA	NA	NA	PACS2	3982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr14	105947921	105948133	105948082	Y	NA	CRIP2,CRIP1,C14orf80,TMEM121	NA	NA	NA	NA	CRIP1	3403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr14	105948139	105949025	105948432	Y	NA	CRIP2,CRIP1,C14orf80,TMEM121	NA	NA	NA	NA	CRIP1	2511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr14	107252931	107253417	107253022	Y	NA	NA	NA	NA	NA	NA	IGHV3-23	529198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.862843142783076
chr14	107253494	107254031	107253700	Y	NA	NA	NA	NA	NA	NA	IGHV3-23	529761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.601852205657633
chr14	107254436	107254688	107254673	Y	NA	NA	NA	NA	NA	NA	IGHV3-23	530703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	22927527	22927784	22927666	Y	CYFIP1	CYFIP1	NA	NA	NA	NA	CYFIP1	37522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr15	23041896	23042224	23042060	Y	NA	NIPA2	NA	NA	NA	NA	NIPA2	9469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	24114794	24115156	24114976	Y	NA	NA	NA	NA	NA	NA	MKRN3	306340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	25018281	25018456	25018384	Y	SNURF,SNRPN,SNRPN,SNRPN	SNRPN	NA	NA	NA	NA	SNRPN	48338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr15	25123469	25123644	25123557	Y	SNURF,SNRPN,C15orf2,SNRPN,SNRPN	NA	NA	NA	NA	NA	SNRPN	56675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	25564293	25564526	25564383	Y	SNRPN,SNURF,SNRPN,UBE3A,UBE3A	NA	NA	NA	NA	NA	UBE3A	117602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	25577365	25577592	25577422	Y	NA	NA	NA	NA	NA	NA	UBE3A	104536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	25586903	25587047	25586976	Y	SNRPN,SNURF,SNRPN,UBE3A,UBE3A	NA	NA	NA	NA	NA	UBE3A	95081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	25595443	25596209	25595953	Y	SNRPN,SNURF,SNRPN,UBE3A	NA	NA	NA	NA	NA	UBE3A	85919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	25614491	25614606	25614563	Y	NA	NA	NA	NA	NA	NA	UBE3A	67522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr15	25624568	25624607	25624588	Y	NA	NA	NA	NA	NA	NA	UBE3A	57521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	25641447	25641749	25641585	Y	NA	UBE3A	NA	NA	NA	NA	UBE3A	40379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	25646289	25646668	25646556	Y	SNURF,SNRPN,UBE3A	UBE3A	NA	NA	NA	NA	UBE3A	35460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	25889400	25889660	25889527	Y	NA	NA	LOC503519	IMR90	Hi-C	24141950	UBE3A	207272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	26327449	26327665	26327505	Y	NA	NA	ATP10A,LOC100128714	IMR90	Hi-C	24141950	ATP10A	219132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr15	29277250	29277459	29277367	Y	NDNL2,APBA2	NA	NA	NA	NA	NA	APBA2	149621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	29526240	29526874	29526776	Y	NA	NDNL2	NA	NA	NA	NA	NDNL2	33159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	30022522	30022814	30022806	Y	FAM189A1	NA	NA	NA	NA	NA	RP11-680F8.1	57328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	30216999	30217403	30217070	Y	TJP1	TJP1	TJP1,FAM189A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TJP1	41665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	31558458	31558972	31558644	Y	MTMR10,KLF13	RP11-16E12.2	LOC283710,OTUD7A,KLF13	IMR90	Hi-C	24141950	RP11-16E12.2	37417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	31617195	31617521	31617244	Y	MTMR10,KLF13	KLF13	NA	NA	NA	NA	KLF13	137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	31620735	31621235	31621017	Y	MTMR10,KLF13	KLF13	NA	NA	NA	NA	KLF13	3677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr15	31627410	31627711	31627458	Y	NA	KLF13	NA	NA	NA	NA	KLF13	10352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	31689645	31689781	31689725	Y	MTMR10,KLF13	NA	NA	NA	NA	NA	KLF13	72587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	32962221	32962756	32962661	Y	NA	GREM1	NA	NA	NA	NA	GREM1	45419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	33164908	33165041	33164975	Y	NA	NA	NA	NA	NA	NA	GREM1	156733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	33494122	33494379	33494251	Y	NA	NA	NA	NA	NA	NA	GREM1	485947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	33502141	33502453	33502281	Y	NA	NA	TMCO5B	IMR90	Hi-C	24141950	GREM1	493966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	34421770	34422050	34421910	Y	NA	PGBD4	NA	NA	NA	NA	PGBD4	29496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	34531616	34532056	34531745	Y	NA	NA	NA	NA	NA	NA	SLC12A6	96205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	34597819	34597943	34597881	Y	NA	SLC12A6,NOP10	NA	NA	NA	NA	SLC12A6	30318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	34807090	34807442	34807248	Y	NA	NA	NA	NA	NA	NA	GOLGA8A,GOLGA8B	71262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr15	35361327	35361523	35361425	Y	NA	RP11-323I15.2	ATPBD4,LOC100507466	IMR90	Hi-C	24141950	RP11-323I15.2	21159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	35384953	35385239	35385081	Y	NA	RP11-323I15.2	ATPBD4	IMR90	Hi-C	24141950	RP11-323I15.2	2271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr15	35588902	35588944	35588923	Y	NA	NA	ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466	IMR90	Hi-C	24141950	RP11-323I15.2	206220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	35590731	35591134	35590845	Y	NA	NA	ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466	IMR90	Hi-C	24141950	RP11-323I15.2	208049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr15	35599049	35599138	35599102	Y	NA	NA	ATPBD4,C15orf41,CSNK1A1P1,MEIS2,LOC100507466	IMR90	Hi-C	24141950	RP11-323I15.2	216367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	35650165	35650403	35650284	Y	NA	NA	NA	NA	NA	NA	RP11-323I15.2	267483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	35788754	35789006	35788880	Y	NA	NA	NA	NA	NA	NA	RP11-323I15.2	406072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	35840171	35840395	35840294	Y	NA	NA	NA	NA	NA	NA	RP11-323I15.2	457489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	36897694	36898088	36897999	Y	C15orf41	C15orf41	NA	NA	NA	NA	C15orf41	27882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	36910960	36911073	36911017	Y	MEIS2,C15orf41	C15orf41	NA	NA	NA	NA	C15orf41	41148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr15	37203314	37203431	37203373	Y	NA	NA	NA	NA	NA	NA	CSNK1A1P1	94654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	37207397	37207450	37207424	Y	C15orf41,MEIS2,MEIS2,MEIS2,MEIS2	NA	NA	NA	NA	NA	CSNK1A1P1	98737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	37403099	37403474	37403147	Y	MEIS2,MEIS2,MEIS2,MEIS2	RP11-128A17.1,MEIS2	LOC100507466,C15orf41,MEIS2	IMR90	Hi-C	24141950	MEIS2	11595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	38546643	38547172	38546943	Y	NA	SPRED1	NA	NA	NA	NA	SPRED1	4116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr15	38750000	38750177	38750089	Y	NA	FAM98B	NA	NA	NA	NA	FAM98B	5672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	38751078	38751316	38751209	Y	NA	FAM98B	NA	NA	NA	NA	FAM98B	6750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	39361992	39362177	39362006	Y	NA	NA	FSIP1,C15orf53	IMR90	Hi-C	24141950	RP11-624L4.1	355219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	39417556	39417775	39417675	Y	NA	NA	THBS1,C15orf53,FSIP1	IMR90	Hi-C	24141950	RP11-624L4.1	299621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	39432291	39432412	39432368	Y	THBS1	NA	THBS1,C15orf53,FSIP1,RASGRP1	IMR90	Hi-C	24141950	RP11-624L4.1	284984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	39447330	39447720	39447666	Y	NA	NA	FSIP1,C15orf53,THBS1	IMR90	Hi-C	24141950	RP11-624L4.1	269676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	39720042	39720248	39720109	Y	NA	RP11-624L4.1	C15orf53,FSIP1,THBS1	IMR90	Hi-C	24141950	RP11-624L4.1	2646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr15	40361212	40361596	40361446	Y	NA	SRP14,BMF	NA	NA	NA	NA	SRP14	31823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	40373777	40374114	40374053	Y	FSIP1,BAHD1,BMF,BMF,BMF	SRP14,BMF	NA	NA	NA	NA	BMF	24979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.713445714212892
chr15	40388043	40388381	40388211	Y	NA	BMF	NA	NA	NA	NA	BMF	10712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	40391032	40391342	40391133	Y	PLCB2,C15orf57,BMF,BMF,BMF	BMF	NA	NA	NA	NA	BMF	7751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr15	40397040	40397227	40397203	Y	BUB1B,BMF,BMF,BMF	BMF	NA	NA	NA	NA	BMF	1866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	40460566	40460976	40460804	Y	NA	BUB1B,PAK6	NA	NA	NA	NA	BUB1B	9342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	40463815	40464014	40463832	Y	NA	BUB1B,PAK6	NA	NA	NA	NA	BUB1B	12591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	40803808	40804249	40803896	Y	NA	CHST14,RP11-64K12.1	NA	NA	NA	NA	RP11-64K12.1	32294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	41139695	41139794	41139738	Y	NA	ZFYVE19,DNAJC17,RHOV,VPS18	NA	NA	NA	NA	RHOV	24693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	41199675	41199878	41199759	Y	DLL4	RHOV,VPS18,DLL4,CHAC1	DLL4	IMR90	Hi-C	24141950	VPS18	15047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	41233721	41234461	41233781	Y	C15orf57,VPS18	VPS18,DLL4,CHAC1	NA	NA	NA	NA	CHAC1	8699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	41254301	41254691	41254494	Y	NA	DLL4,CHAC1	NA	NA	NA	NA	CHAC1	11141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	41581854	41582095	41581909	Y	NA	OIP5-AS1,OIP5,NUSAP1	NA	NA	NA	NA	OIP5-AS1	7666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	41788010	41788393	41788374	Y	NA	ITPKA,RPAP1	NA	NA	NA	NA	ITPKA	4419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.949455739089659
chr15	41878002	41878382	41878246	Y	NA	RPAP1,TYRO3,MGA	NA	NA	NA	NA	TYRO3	30129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr15	41953918	41954236	41954127	Y	EHD4,MGA	MGA	MAPKBP1	IMR90	Hi-C	24141950	MGA	42496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.559614363583063
chr15	42232566	42232958	42232887	Y	EHD4	EHD4	SPTBN5	IMR90	Hi-C	24141950	EHD4	29818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	42327713	42327843	42327787	Y	MAPKBP1,PLA2G4B	NA	EHD4	IMR90	Hi-C	24141950	EHD4	64937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr15	42535686	42535733	42535710	Y	NA	VPS39,GANC,TMEM87A	NA	NA	NA	NA	GANC	27698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	42547123	42547182	42547153	Y	NA	VPS39,GANC,TMEM87A	NA	NA	NA	NA	GANC	16249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	42723209	42723609	42723409	Y	NA	NA	NA	NA	NA	NA	SNAP23	57822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	42814906	42815063	42814960	Y	NA	SNAP23,LRRC57,HAUS2	NA	NA	NA	NA	LRRC57	23937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	43200953	43201247	43201100	Y	NA	TTBK2	NA	NA	NA	NA	TTBK2	9760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	43321563	43321622	43321602	Y	NA	NA	NA	NA	NA	NA	UBR1	74689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	44289112	44289501	44289307	Y	NA	ACTBP7	NA	NA	NA	NA	ACTBP7	8730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	44837233	44837387	44837300	Y	CTDSPL2,PATL2	EIF3J-AS1,EIF3J	NA	NA	NA	NA	EIF3J	9978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	44838663	44839045	44838853	Y	NA	EIF3J-AS1,EIF3J	NA	NA	NA	NA	EIF3J	11408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	44869897	44870156	44869963	Y	NA	EIF3J-AS1,EIF3J	NA	NA	NA	NA	EIF3J	42642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	44954800	44955080	44954968	Y	CTDSPL2,TRIM69,PATL2,B2M,SPG11	SPG11,PATL2,B2M	NA	NA	NA	NA	SPG11	924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.435529887296266
chr15	45005185	45005759	45005376	Y	CTDSPL2,SPG11,PATL2,B2M,TRIM69	PATL2,B2M,TRIM69	NA	NA	NA	NA	B2M	3510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	45076532	45076874	45076594	Y	B2M	NA	NA	NA	NA	NA	TRIM69	57346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr15	45340934	45341315	45341066	Y	SPG11,B2M,SPATA5L1	SORD	NA	NA	NA	NA	SORD	27632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	45737363	45738279	45737765	Y	SQRDL,PLDN,SPATA5L1,C15orf48	GATM,SPATA5L1	NA	NA	NA	NA	SPATA5L1	44834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	45748469	45749175	45748989	Y	SPATA5L1,C15orf48,SQRDL,PLDN	NA	NA	NA	NA	NA	SPATA5L1	55940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	45932818	45933115	45932936	Y	C15orf48,PLDN,SQRDL	SQRDL	NA	NA	NA	NA	SQRDL	11472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	45938532	45938945	45938638	Y	NA	SQRDL	NA	NA	NA	NA	SQRDL	17186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	46881345	46881677	46881639	Y	NA	NA	NA	NA	NA	NA	SQRDL	959999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	48311619	48311717	48311668	Y	NA	NA	SEMA6D,SLC12A1	IMR90	Hi-C	24141950	MYEF2	156997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	49087141	49087279	49087204	Y	NA	CEP152	NA	NA	NA	NA	CEP152	14064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	49268018	49268116	49268067	Y	NA	NA	NA	NA	NA	NA	SECISBP2L	68644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	49598906	49599159	49599033	Y	NA	NA	NA	NA	NA	NA	COPS2	153048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr15	49939997	49940334	49940166	Y	NA	DTWD1	NA	NA	NA	NA	DTWD1	28820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	50201915	50201939	50201930	Y	NA	NA	NA	NA	NA	NA	CTD-2647E9.1	117472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	50408630	50408976	50408933	Y	USP8,HDC,GABPB1,ATP8B4	NA	NA	NA	NA	NA	SLC27A2	63417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	50475759	50476090	50475833	Y	SLC27A2	SLC27A2	NA	NA	NA	NA	SLC27A2	3366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	50620432	50620711	50620437	Y	NA	GABPB1-AS1,GABPB1	NA	NA	NA	NA	GABPB1-AS1	24814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	50634288	50634665	50634477	Y	NA	GABPB1-AS1,GABPB1	NA	NA	NA	NA	GABPB1-AS1	10860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	50793550	50793719	50793635	Y	USP8,TRPM7	NA	NA	NA	NA	NA	USP8	78973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	50890405	50890451	50890426	Y	USP8,SPPL2A,TRPM7	NA	NA	NA	NA	NA	TRPM7	86561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	50948351	50948714	50948533	Y	NA	TRPM7	NA	NA	NA	NA	TRPM7	28298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	50995097	50995499	50995351	Y	SPPL2A	TRPM7	NA	NA	NA	NA	TRPM7	18085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.258031381975417
chr15	51369900	51370046	51369953	Y	NA	TNFAIP8L3	NA	NA	NA	NA	TNFAIP8L3	25427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	51560081	51560206	51560144	Y	NA	NA	NA	NA	NA	NA	TNFAIP8L3	164608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	51595036	51595426	51595331	Y	NA	NA	NA	NA	NA	NA	TNFAIP8L3	199563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	51608963	51609320	51609267	Y	CYP19A1	NA	NA	NA	NA	NA	TNFAIP8L3	213490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	51628727	51629122	51629096	Y	TNFAIP8L3,CYP19A1	NA	NA	NA	NA	NA	TNFAIP8L3	233254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	51912435	51913121	51913004	Y	TMOD3,MAPK6,LYSMD2,DMXL2	NA	NA	NA	NA	NA	DMXL2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	52153526	52153874	52153708	Y	NA	TMOD3	NA	NA	NA	NA	TMOD3	33701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	52235970	52236006	52235989	Y	DMXL2,MAPK6	MAPK6,LEO1	NA	NA	NA	NA	MAPK6	6297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	52273738	52273979	52273778	Y	NA	MAPK6,LEO1	MAPK6,GNB5,MYO5C,BCL2L10	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	LEO1	11735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr15	52299898	52300006	52299952	Y	NA	LEO1	TMOD3,LEO1,MAPK6,BCL2L10,GNB5,MYO5C	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LEO1	37895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	52330351	52330361	52330356	Y	NA	NA	NA	NA	NA	NA	CTD-2184D3.1	55131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	52369278	52369628	52369325	Y	MAPK6	CTD-2184D3.1,CTD-2184D3.5	GNB5,BCL2L10,MYO5C	IMR90	Hi-C	24141950	CTD-2184D3.1	15864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr15	52526918	52527038	52526972	Y	KIAA1370,GNB5	GNB5	NA	NA	NA	NA	GNB5	45352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	52580530	52580869	52580787	Y	ARPP19,MYO5C	MYO5C	NA	NA	NA	NA	MYO5C	5126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.443746519105721
chr15	52587042	52587046	52587044	Y	NA	MYO5C	NA	NA	NA	NA	MYO5C	1047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr15	52851602	52851989	52851853	Y	NA	MYO5A,ARPP19	NA	NA	NA	NA	ARPP19	8091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	55463152	55463211	55463182	Y	NA	RSL24D1	NA	NA	NA	NA	RSL24D1	24054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	55487983	55488563	55488357	Y	RAB27A,PIGB,RSL24D1	RSL24D1	NA	NA	NA	NA	RSL24D1	718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr15	55514036	55514211	55514088	Y	RAB27A,PIGB,CCPG1,CCPG1	RSL24D1	NA	NA	NA	NA	RSL24D1	26771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	55928441	55928509	55928475	Y	NA	PYGO1	NA	NA	NA	NA	PYGO1	49296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	56201661	56201754	56201731	Y	NEDD4	NA	NA	NA	NA	NA	NEDD4	82190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	56332751	56332969	56332911	Y	NA	NEDD4	NEDD4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NEDD4	48807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr15	56419675	56420043	56419859	Y	RFX7	NA	NA	NA	NA	NA	RFX7	113440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	56475345	56475479	56475412	Y	RFX7	NA	NA	NA	NA	NA	RFX7	58004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	56475850	56476168	56476009	Y	MNS1	NA	NA	NA	NA	NA	RFX7	57315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	56513902	56514185	56514176	Y	NA	RFX7,TEX9	NA	NA	NA	NA	RFX7	19298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr15	57261737	57262096	57261746	Y	NA	NA	NA	NA	NA	NA	TCF12	52916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	57465140	57465369	57465208	Y	ZNF280D,TCF12	NA	LOC283663	IMR90	Hi-C	24141950	CGNL1	200796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	57798359	57798473	57798399	Y	NA	NA	NA	NA	NA	NA	GCOM1	83633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	57846695	57846878	57846787	Y	NA	GCOM1,MYZAP,POLR2M	NA	NA	NA	NA	GCOM1	35228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	58574640	58574908	58574743	Y	LIPC	NA	LIPC,ADAM10,FAM63B,SLTM	IMR90	Hi-C	24141950	ADAM10	465269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	58732356	58732646	58732550	Y	NA	NA	NA	NA	NA	NA	ADAM10	307531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	58751372	58751614	58751455	Y	AQP9,SLTM,ADAM10	NA	NA	NA	NA	NA	ADAM10	288563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr15	58761932	58762090	58762054	Y	NA	NA	ADAM10	IMR90	Hi-C	24141950	ADAM10	278087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr15	59019191	59019406	59019394	Y	NA	ADAM10,FAM63B	NA	NA	NA	NA	ADAM10	20771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	59023904	59024166	59024035	Y	RNF111	ADAM10,FAM63B	NA	NA	NA	NA	ADAM10	16011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	59085961	59086460	59086218	Y	NA	ADAM10,FAM63B	NA	NA	NA	NA	FAM63B	24570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr15	59138361	59138756	59138559	Y	NA	ZNF444P1,RNF111	NA	NA	NA	NA	ZNF444P1	16449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	59158498	59158653	59158597	Y	ADAM10,RNF111,SLTM	ZNF444P1,RNF111	NA	NA	NA	NA	RNF111	3124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351054714754325
chr15	59194300	59194605	59194559	Y	NA	ZNF444P1,RNF111,SLTM	NA	NA	NA	NA	SLTM	29247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	60757802	60757969	60757886	Y	NA	NARG2,RP11-219B17.1	NA	NA	NA	NA	NARG2	11390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	60818402	60818756	60818740	Y	RORA	NARG2,RP11-219B17.1	NA	NA	NA	NA	RP11-219B17.1	49025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	60861865	60862603	60862448	Y	NA	NA	NA	NA	NA	NA	RP11-219B17.1	92488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	60867318	60867604	60867466	Y	NA	NA	NA	NA	NA	NA	RP11-219B17.1	97941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr15	60874514	60874871	60874792	Y	RORA	NA	NA	NA	NA	NA	RP11-219B17.1	105137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	60881604	60881753	60881652	Y	RORA	NA	NA	NA	NA	NA	RP11-219B17.1	112227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	60883059	60884017	60883872	Y	RORA	NA	NA	NA	NA	NA	RP11-219B17.1	113682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	61014073	61014301	61014187	Y	RORA	NA	NA	NA	NA	NA	RP11-219B17.1	244696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	61520020	61520614	61520340	Y	RORA	RORA	NA	NA	NA	NA	RORA	502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	62068445	62068662	62068554	Y	NA	NA	NA	NA	NA	NA	VPS13C	282010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	62405210	62405473	62405223	Y	NA	C2CD4A	NA	NA	NA	NA	C2CD4A	48034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	62683990	62684402	62684060	Y	NA	TLN2	TLN2,MGC15885	IMR90	Hi-C	24141950	TLN2	3265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr15	62684510	62685208	62684868	Y	NA	TLN2	TLN2,MGC15885	IMR90	Hi-C	24141950	TLN2	3785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.523787769588016
chr15	63372629	63373133	63372992	Y	NA	TPM1,RP11-244F12.3,LACTB	NA	NA	NA	NA	RP11-244F12.3	33043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr15	63439577	63439949	63439764	Y	NA	LACTB,RPS27L,RAB8B	NA	NA	NA	NA	RPS27L	8271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr15	63765155	63765456	63765306	Y	NA	USP3	APH1B,RAB8B,FBXL22,LOC100130855,USP3,CA12,HERC1,FAM96A,SNX1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	USP3	29337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351545829319398
chr15	63766170	63766327	63766326	Y	HERC1,USP3	USP3	APH1B,RAB8B,FBXL22,LOC100130855,USP3,CA12,HERC1,FAM96A,SNX1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	USP3	28466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.542026928544057
chr15	63771566	63772233	63772016	Y	HERC1,USP3	USP3	APH1B,RAB8B,CA12,USP3,HERC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP3	22560	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	63773261	63773631	63773483	Y	LACTB,RAB8B,USP3	USP3	APH1B,RAB8B,CA12,USP3,HERC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP3	21162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	63794488	63794915	63794759	Y	NA	NA	NA	NA	NA	NA	USP3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	63795379	63795825	63795543	Y	NA	USP3	NA	NA	NA	NA	USP3	586	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.25876372633448
chr15	63803463	63803731	63803481	Y	NA	USP3	NA	NA	NA	NA	USP3	8670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr15	63871063	63871418	63871089	Y	NA	FBXL22,USP3-AS1	NA	NA	NA	NA	FBXL22	16134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	64060591	64060833	64060743	Y	USP3,HERC1,DAPK2	NA	NA	NA	NA	NA	HERC1	63308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	64385169	64385477	64385384	Y	NA	DAPK2,FAM96A,SNX1	NA	NA	NA	NA	SNX1	847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	64538820	64539298	64539122	Y	NA	NA	NA	NA	NA	NA	PPIB	85416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	64540216	64540468	64540344	Y	HERC1,ZNF609	NA	NA	NA	NA	NA	PPIB	86812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	64722485	64722825	64722650	Y	NA	KIAA0101,TRIP4,ZNF609	NA	NA	NA	NA	ZNF609	28116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	64753700	64753985	64753784	Y	PLEKHO2	ZNF609	NA	NA	NA	NA	ZNF609	2759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	64754012	64754177	64754162	Y	NA	ZNF609	NA	NA	NA	NA	ZNF609	3071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	64919514	64919887	64919625	Y	NA	RP11-330L19.1	NA	NA	NA	NA	RP11-330L19.1	36336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	64920832	64921228	64921023	Y	ZNF609,OAZ2	RP11-330L19.1	NA	NA	NA	NA	RP11-330L19.1	37654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	64940943	64941327	64941079	Y	NA	NA	NA	NA	NA	NA	OAZ2	52153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	65127928	65128208	65128016	Y	NA	PIF1,PLEKHO2	PIF1	K562	ChIA-PET	22265404	PLEKHO2	3880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr15	65186654	65187183	65187027	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16	NA	NA	NA	NA	NA	PLEKHO2	54566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	65244919	65245418	65244949	Y	ZNF609,OAZ2,PLEKHO2,SPG21,SPG21,PARP16,ANKDD1A	SPG21	NA	NA	NA	NA	SPG21	35230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.922336891469141
chr15	65245420	65245827	65245459	Y	ZNF609,OAZ2,PLEKHO2,PARP16	SPG21	NA	NA	NA	NA	SPG21	34821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.791350052537746
chr15	65277772	65277992	65277893	Y	OAZ2,PLEKHO2	SPG21,MTFMT	NA	NA	NA	NA	SPG21	2656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	65344740	65344762	65344754	Y	NA	MTFMT	NA	NA	NA	NA	MTFMT	24763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr15	65403116	65403434	65403296	Y	ANKDD1A,PDCD7	PDCD7	UBAP1L,KBTBD13,OSTBETA,RASL12	IMR90	Hi-C	24141950	PDCD7	20740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	65596266	65596532	65596409	Y	NA	RNU5A-1,PARP16	PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PARP16	5310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr15	65596702	65597188	65596889	Y	DENND4A	RNU5A-1,PARP16	PARP16,CILP,CLPX,IGDCC3,PDCD7,MTFMT,DPP8,RASL12,OSTBETA,IGDCC4,SPG21,PTPLAD1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PARP16	5746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.222204787980371
chr15	65823475	65823857	65823545	Y	IGDCC4	DPP8,PTPLAD1	NA	NA	NA	NA	PTPLAD1	2719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr15	65831867	65832220	65831871	Y	NA	DPP8,PTPLAD1	C15orf44	IMR90	Hi-C	24141950	PTPLAD1	11111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	65841762	65842141	65841952	Y	PARP16	DPP8,PTPLAD1	NA	NA	NA	NA	PTPLAD1	21006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	65951559	65951691	65951625	Y	NA	SLC24A1	NA	NA	NA	NA	SLC24A1	49855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr15	66125063	66125305	66125185	Y	NA	DENND4A	SLC24A1,DENND4A,RAB11A,C15orf44,MEGF11	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DENND4A	42432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.671539400565832
chr15	66162838	66163256	66163114	Y	NA	NA	NA	NA	NA	NA	DENND4A	80207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.215793539900847
chr15	66163349	66163534	66163463	Y	NA	NA	NA	NA	NA	NA	DENND4A	80718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	66177095	66177419	66177152	Y	NA	NA	NA	NA	NA	NA	DENND4A	94464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	66707547	66707736	66707571	Y	MAP2K1	TIPIN,MAP2K1	RPL4,SNAPC5	IMR90	Hi-C	24141950	MAP2K1	30392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr15	66764584	66765048	66764851	Y	NA	SNAPC5,SNORD18A,ZWILCH,RPL4	NA	NA	NA	NA	SNAPC5	23103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	66972187	66972410	66972299	Y	NA	SMAD6	SMAD6	IMR90	Hi-C	24141950	SMAD6	20156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	66993287	66993569	66993487	Y	MAP2K1,SMAD6	SMAD6	NA	NA	NA	NA	SMAD6	721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.812880295071323
chr15	67287183	67287436	67287310	Y	NA	NA	SMAD3,IQCH,LOC100506686,SKOR1	IMR90	Hi-C	24141950	RP11-798K3.2	62155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	67341124	67341334	67341261	Y	NA	RP11-798K3.2,SMAD3	SMAD3,IQCH,LOC100506686,AAGAB	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-798K3.2	8257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr15	67348530	67348587	67348559	Y	NA	RP11-798K3.2,SMAD3	SMAD3,IQCH,LOC100506686,AAGAB	IMR90	Hi-C	24141950	RP11-798K3.2	1004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	67359902	67360303	67360058	Y	NA	RP11-798K3.2,SMAD3	NA	NA	NA	NA	SMAD3	5801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192949028202412
chr15	67366599	67366961	67366679	Y	NA	RP11-798K3.2,SMAD3	NA	NA	NA	NA	SMAD3	12498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	67401891	67402640	67402087	Y	SMAD3	SMAD3,RP11-342M21.2	NA	NA	NA	NA	RP11-342M21.2	34637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	67409139	67409556	67409296	Y	SMAD3	RP11-342M21.2	NA	NA	NA	NA	RP11-342M21.2	27721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	67440032	67440420	67440131	Y	NA	RP11-342M21.2	NA	NA	NA	NA	RP11-342M21.2	2755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	67442347	67443164	67443030	Y	SMAD3	RP11-342M21.2	NA	NA	NA	NA	RP11-342M21.2	5070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr15	67488498	67488886	67488594	Y	SMAD3	RPS24P16	NA	NA	NA	NA	RPS24P16	33898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	67490281	67490446	67490307	Y	SMAD3	RPS24P16	NA	NA	NA	NA	RPS24P16	32338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	67867550	67867820	67867663	Y	NA	MAP2K5	NA	NA	NA	NA	MAP2K5	34503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	67926783	67927143	67926830	Y	NA	NA	NA	NA	NA	NA	MAP2K5	93736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	67982881	67982892	67982887	Y	NA	NA	NA	NA	NA	NA	MAP2K5	149834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	68132387	68132778	68132514	Y	PIAS1	NA	NA	NA	NA	NA	PIAS1	211739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr15	68176779	68177152	68176934	Y	NA	NA	PIAS1,CLN6,C15orf61,LOC100506686,CALML4	IMR90	Hi-C	24141950	PIAS1	167365	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr15	68207456	68207574	68207516	Y	NA	NA	CALML4,CLN6,PIAS1,LOC100506686,IQCH	IMR90	Hi-C	24141950	PIAS1	136943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr15	68238127	68238678	68238396	Y	NA	NA	PIAS1,CALML4,CLN6,C15orf61,LOC100506686	IMR90	Hi-C	24141950	PIAS1	105839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.583773144446355
chr15	68441418	68441688	68441529	Y	NA	NA	NA	NA	NA	NA	CALML4	54729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	68579972	68580192	68580087	Y	ITGA11	CLN6,FEM1B	NA	NA	NA	NA	FEM1B	11831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	68878617	68878894	68878756	Y	CORO2B	CORO2B	NA	NA	NA	NA	CORO2B	9309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	69114506	69114876	69114758	Y	NA	SPESP1,ANP32A	NA	NA	NA	NA	ANP32A	3270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	69453904	69454158	69454121	Y	GLCE	GLCE	NA	NA	NA	NA	GLCE	2981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	70391851	70392235	70392005	Y	TLE3	TLE3	NA	NA	NA	NA	TLE3	3336	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.3471822179782
chr15	70433943	70434190	70434030	Y	TLE3	TLE3	LOC145837,TLE3,C15orf50	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TLE3	45428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	70679327	70679587	70679457	Y	NA	NA	NA	NA	NA	NA	TLE3	290812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	70877631	70877741	70877691	Y	NA	NA	UACA	IMR90	Hi-C	24141950	UACA	176191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	71126164	71126470	71126369	Y	NA	LRRC49,LARP6	NA	NA	NA	NA	LRRC49	17108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	72198564	72199008	72198773	Y	PARP6,MYO9A,CELF6,CELF6,CELF6	NA	NA	NA	NA	NA	SENP8	205591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	72318611	72318818	72318715	Y	NA	NA	NA	NA	NA	NA	SENP8	85781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	72518614	72519346	72519221	Y	ARIH1,PKM2	GRAMD2	NA	NA	NA	NA	GRAMD2	30488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	72520083	72520441	72520217	Y	ARIH1,PKM2,PARP6,CELF6,CELF6,CELF6	GRAMD2	NA	NA	NA	NA	GRAMD2	31957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	72617371	72617435	72617389	Y	MYO9A,SENP8,PARP6,CELF6,CELF6,CELF6	CELF6,HEXA	NA	NA	NA	NA	CELF6	6901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	72824073	72824405	72824125	Y	NA	NA	NA	NA	NA	NA	ARIH1	59406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	73926570	73926835	73926736	Y	PML	NPTN,CD276	C15orf60	IMR90	Hi-C	24141950	NPTN	2095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	73983569	73983946	73983758	Y	NA	CD276	NA	NA	NA	NA	CD276	9262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	74666695	74666987	74666837	Y	CLK3,ARID3B	NA	NA	NA	NA	NA	SEMA7A	57821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.155145619794687
chr15	74677413	74677899	74677622	Y	SEMA7A,SEMA7A,CSK,CLK3,ARID3B	SEMA7A	SEMA7A	K562	ChIA-PET	22265404	SEMA7A	46909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr15	74681899	74682338	74682078	Y	SEMA7A,SEMA7A,CLK3,ARID3B	SEMA7A	NA	NA	NA	NA	SEMA7A	42470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	74689389	74689592	74689450	Y	SEMA7A,SEMA7A	SEMA7A	NA	NA	NA	NA	SEMA7A	35216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	74722934	74723282	74723072	Y	CLK3,SEMA7A,SEMA7A,ARID3B	SEMA7A,UBL7	NA	NA	NA	NA	SEMA7A	1526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	74801015	74801389	74801202	Y	NA	UBL7,ARID3B	NA	NA	NA	NA	ARID3B	30129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	74899091	74899429	74899332	Y	PPCDC,CLK3,CLK3	CLK3	NA	NA	NA	NA	CLK3	10250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	74908840	74909023	74908946	Y	NA	CLK3	NA	NA	NA	NA	CLK3	19999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr15	74930641	74931010	74930809	Y	ARID3B,CSK	CLK3	NA	NA	NA	NA	CLK3	41800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	75018665	75019349	75018947	Y	SCAMP2,C15orf39,CYP1A1	EDC3,CYP1A1	NA	NA	NA	NA	CYP1A1	2714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.454923217672401
chr15	75073348	75073866	75073498	Y	ARID3B,CLK3,SCAMP2,C15orf39,CSK	CSK	NA	NA	NA	NA	CSK	950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	75075558	75076065	75075775	Y	ARID3B,CLK3,CLK3,SCAMP2,C15orf39,CSK	CSK	NA	NA	NA	NA	CSK	3160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	75077206	75078007	75077402	Y	NA	CSK	NA	NA	NA	NA	CSK	4808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	75288966	75289325	75289146	Y	CPLX3,ULK3,SCAMP5	SCAMP5,RPP25,PPCDC	NA	NA	NA	NA	PPCDC	24571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	75328661	75328897	75328778	Y	MAN2C1,C15orf39	PPCDC	NA	NA	NA	NA	PPCDC	14765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	75339281	75339878	75339595	Y	SIN3A,SIN3A,MAN2C1,CLK3,CSK,SCAMP2,C15orf39	PPCDC	NA	NA	NA	NA	PPCDC	25385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr15	75430605	75430778	75430735	Y	SIN3A,SIN3A,MAN2C1,C15orf39	NA	PPCDC,RPP25,C15orf39,SCAMP5	IMR90	Hi-C	24141950	C15orf39	55206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr15	75445545	75445830	75445694	Y	SIN3A,SIN3A,CSK,C15orf39	C15orf39	PPCDC,C15orf39	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	C15orf39	40154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr15	75460054	75460405	75460311	Y	NA	C15orf39	SCAMP5,PPCDC,C15orf39	IMR90	Hi-C	24141950	C15orf39	25579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	75470847	75471095	75470955	Y	SIN3A,SIN3A,MAN2C1,CSK,C15orf39	C15orf39	C15orf39	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	C15orf39	14889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.298463328712857
chr15	75742568	75742962	75742713	Y	NA	SIN3A	NA	NA	NA	NA	SIN3A	3221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr15	75744907	75745094	75744993	Y	C15orf39,ODF3L1,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	75745296	75745530	75745399	Y	PPCDC,IMP3,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.405783012953233
chr15	75746315	75746749	75746512	Y	PPCDC,C15orf39,IMP3,NEIL1,MAN2C1,SIN3A,SIN3A,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr15	75747348	75747533	75747407	Y	RPP25,SIN3A	SIN3A	NA	NA	NA	NA	SIN3A	1165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.303228779200014
chr15	75867013	75867354	75867182	Y	C15orf39,MAN2C1,SIN3A,SIN3A,UBE2Q2,ODF3L1	PTPN9,SNUPN	NA	NA	NA	NA	PTPN9	2276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	75959061	75959441	75959310	Y	SNX33	SNUPN,SNX33,IMP3	NA	NA	NA	NA	IMP3	20014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	76050803	76051078	76050853	Y	NA	ODF3L1,DNM1P35	NA	NA	NA	NA	DNM1P35	21839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr15	76455838	76456047	76455943	Y	NA	NA	NA	NA	NA	NA	ETFA	145766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	76543637	76543996	76543963	Y	NA	NA	C15orf27	IMR90	Hi-C	24141950	ETFA	57817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr15	76639120	76639380	76639270	Y	NA	ETFA,ISL2	NA	NA	NA	NA	ISL2	12055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391646759236527
chr15	76639629	76639850	76639740	Y	NA	ETFA,ISL2	NA	NA	NA	NA	ISL2	12564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	77055500	77055901	77055892	Y	NA	NA	NA	NA	NA	NA	SCAPER	139884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr15	77351977	77352357	77352309	Y	NA	TSPAN3	PSTPIP1	IMR90	Hi-C	24141950	TSPAN3	21969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	77710600	77710857	77710802	Y	NA	PEAK1	NA	NA	NA	NA	HMG20A	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	77711297	77711794	77711478	Y	NA	PEAK1,HMG20A	NA	NA	NA	NA	HMG20A	543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	77739736	77739821	77739778	Y	NA	PEAK1,HMG20A	NA	NA	NA	NA	HMG20A	28982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	78031317	78031646	78031484	Y	LINGO1	NA	NA	NA	NA	NA	LINGO1	79596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	78376570	78376702	78376629	Y	DNAJA4,DNAJA4	TBC1D2B,SNORA63,IDH3A,CIB2	NA	NA	NA	NA	SNORA63	4937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	78667581	78667654	78667595	Y	NA	NA	CRABP1	MCF7	ChIA-PET	22265404	IREB2	60119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr15	79152508	79152900	79152703	Y	IREB2	RPL21P116	MORF4L1,ADAMTS7	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	RPL21P116	1171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	79216586	79216987	79216944	Y	RASGRF1	CTSH	NA	NA	NA	NA	CTSH	22929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr15	79234527	79234916	79234688	Y	CTSH	CTSH	NA	NA	NA	NA	CTSH	5000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	79269322	79269965	79269452	Y	CTSH	CTSH	NA	NA	NA	NA	CTSH	29406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	79272176	79272521	79272351	Y	NA	CTSH	NA	NA	NA	NA	CTSH	32260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	79280826	79281229	79281127	Y	CTSH	CTSH	NA	NA	NA	NA	CTSH	40910	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.24676438477522
chr15	79286409	79286801	79286605	Y	NA	CTSH	NA	NA	NA	NA	CTSH	46493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.522965126595432
chr15	79289232	79289594	79289505	Y	NA	CTSH	NA	NA	NA	NA	CTSH	49316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189497846880113
chr15	79315517	79315838	79315652	Y	NA	NA	NA	NA	NA	NA	CTSH	75601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr15	79381600	79382164	79381699	Y	NA	NA	NA	NA	NA	NA	CTSH	141684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	80164886	80165472	80165199	Y	ZFAND6,ST20,BCL2A1,ST20-MTHFS,MTHFS,MTHFS	MTHFS,C15ORF37,ST20,ST20-MTHFS	NA	NA	NA	NA	MTHFS	22249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	80211506	80211893	80211588	Y	NA	MTHFS,C15ORF37,ST20,ST20-MTHFS,BCL2A1	NA	NA	NA	NA	C15ORF37	1614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	80211933	80212232	80212185	Y	NA	MTHFS,C15ORF37,ST20,ST20-MTHFS,BCL2A1	NA	NA	NA	NA	C15ORF37	1275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr15	80261486	80261590	80261586	Y	NA	C15ORF37,ST20,ST20-MTHFS,BCL2A1	NA	NA	NA	NA	BCL2A1	198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	80453068	80453275	80453180	Y	BCL2A1,ZFAND6	FAH	NA	NA	NA	NA	FAH	10236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	80697752	80697924	80697805	Y	ARNT2	ARNT2	NA	NA	NA	NA	ARNT2	3060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	80786706	80787081	80786777	Y	KIAA1199	NA	NA	NA	NA	NA	ARNT2	92014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	80873166	80873354	80873251	Y	NA	NA	NA	NA	NA	NA	ARNT2	178474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	80881213	80881527	80881378	Y	MESDC1	NA	NA	NA	NA	NA	ARNT2	186521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr15	81082693	81083043	81082764	Y	KIAA1199	KIAA1199	NA	NA	NA	NA	KIAA1199	13009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr15	81099060	81099288	81099113	Y	NA	KIAA1199	NA	NA	NA	NA	KIAA1199	29376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	81131497	81131895	81131781	Y	IL16	NA	NA	NA	NA	NA	KIAA1199	61813	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.26007799549934
chr15	81217313	81217615	81217464	Y	NA	NA	NA	NA	NA	NA	MESDC2	62604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	82302959	82303245	82303102	Y	NA	MEX3B	NA	NA	NA	NA	MEX3B	33237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr15	82339167	82339811	82339478	Y	MEX3B	MEX3B	NA	NA	NA	NA	MEX3B	2685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr15	83620312	83620736	83620674	Y	NA	HOMER2,FAM103A1	NA	NA	NA	NA	HOMER2	31925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	83680959	83681167	83681099	Y	NA	HOMER2,FAM103A1,C15orf40	NA	NA	NA	NA	C15orf40	2566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr15	83681404	83681605	83681512	Y	NA	HOMER2,FAM103A1,C15orf40	NA	NA	NA	NA	C15orf40	3011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr15	83712711	83713060	83712967	Y	NA	C15orf40,BTBD1	C15orf40	IMR90	Hi-C	24141950	BTBD1	21046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	83722004	83722168	83722109	Y	NA	C15orf40,BTBD1	NA	NA	NA	NA	BTBD1	11938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	83817881	83818018	83817954	Y	NA	NA	NA	NA	NA	NA	BTBD1	83775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	83869308	83869629	83869461	Y	SH3GL3	NA	NA	NA	NA	NA	BTBD1	135202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	85131508	85131753	85131631	Y	PDE8A	ZSCAN2,EGLN1P1	NA	NA	NA	NA	ZSCAN2	10464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr15	85290443	85290837	85290532	Y	PDE8A,ZNF592	SEC11A,ZNF592	NA	NA	NA	NA	ZNF592	577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	85361646	85361991	85361963	Y	ALPK3	NA	NA	NA	NA	NA	SLC28A1	63894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr15	85455479	85455863	85455740	Y	SLC28A1	SLC28A1	NA	NA	NA	NA	SLC28A1	29594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.422216276572143
chr15	85458286	85458507	85458420	Y	NA	SLC28A1	NA	NA	NA	NA	SLC28A1	32401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr15	85645018	85645768	85645040	Y	NA	NA	NA	NA	NA	NA	PDE8A	123347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr15	85662697	85662918	85662803	Y	PDE8A	NA	NA	NA	NA	NA	PDE8A	141026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	85725231	85725336	85725284	Y	NA	NA	NA	NA	NA	NA	AKAP13	196466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	85874454	85874742	85874552	Y	NA	AKAP13	AKAP13	IMR90	Hi-C	24141950	AKAP13	47060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	85956762	85957097	85956878	Y	AKAP13,PDE8A	AKAP13,CTD-2262B20.1	NA	NA	NA	NA	CTD-2262B20.1	303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr15	89014009	89014390	89014200	Y	NA	MRPL46,MRPS11	NA	NA	NA	NA	MRPS11	5325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	89183173	89183667	89183329	Y	ABHD2,ISG20	AEN,ISG20	NA	NA	NA	NA	ISG20	5789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	89183856	89184198	89184027	Y	NA	AEN,ISG20	NA	NA	NA	NA	ISG20	6472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	89532902	89533939	89533555	Y	NA	NA	MFGE8,ABHD2	IMR90	Hi-C	24141950	MFGE8	78260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	89638395	89638800	89638498	Y	ISG20,HAPLN3,ABHD2	ABHD2,HMGB1P8	NA	NA	NA	NA	ABHD2	9705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	89648424	89648609	89648517	Y	NA	ABHD2,HMGB1P8	NA	NA	NA	NA	ABHD2	19734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	89664635	89664981	89664666	Y	NA	ABHD2,HMGB1P8	NA	NA	NA	NA	HMGB1P8	12745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr15	89672226	89672631	89672291	Y	ABHD2	ABHD2,HMGB1P8	NA	NA	NA	NA	HMGB1P8	5095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	89672730	89673081	89673051	Y	NA	ABHD2,HMGB1P8	NA	NA	NA	NA	HMGB1P8	4645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	89675943	89676620	89676217	Y	ISG20,ABHD2	ABHD2,HMGB1P8	NA	NA	NA	NA	HMGB1P8	1106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	89679824	89680306	89680208	Y	ABHD2	HMGB1P8	NA	NA	NA	NA	HMGB1P8	2098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.50965151587131
chr15	89683953	89684135	89684061	Y	ABHD2	HMGB1P8	NA	NA	NA	NA	HMGB1P8	6227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	89856537	89857272	89856853	Y	NA	POLG	NA	NA	NA	NA	POLG	18820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	89878895	89879173	89879043	Y	NA	POLG	NA	NA	NA	NA	POLG	2803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr15	89923171	89923194	89923182	Y	NA	POLG	NA	NA	NA	NA	POLG	47079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	89952322	89952605	89952464	Y	NA	NA	NA	NA	NA	NA	POLG	76230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	90005846	90006063	90005954	Y	NA	RHCG	NA	NA	NA	NA	RHCG	31781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.904589358685372
chr15	90197559	90197639	90197586	Y	KIF7	KIF7,PLIN1,PEX11A,WDR93	NA	NA	NA	NA	KIF7	877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	90223736	90224077	90223949	Y	NA	KIF7,PLIN1,PEX11A,WDR93	NA	NA	NA	NA	PLIN1	3078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	90325168	90325324	90325249	Y	POLG,ZNF710,CIB1,ANPEP	MESP1,ANPEP	NA	NA	NA	NA	ANPEP	31309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	90357155	90357491	90357451	Y	POLG,ZNF710,SEMA4B,AP3S2,ANPEP	ANPEP	NA	NA	NA	NA	ANPEP	522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr15	90371902	90372049	90371963	Y	ZNF710,CIB1,ANPEP,AP3S2	ANPEP	NA	NA	NA	NA	ANPEP	15269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	90436374	90436604	90436501	Y	NA	AP3S2,C15orf38-AP3S2,C15orf38	NA	NA	NA	NA	AP3S2	800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	90441878	90442278	90442169	Y	C15orf38	AP3S2,C15orf38-AP3S2,C15orf38	NA	NA	NA	NA	AP3S2	6304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	90456787	90457058	90456927	Y	NA	AP3S2,C15orf38-AP3S2,C15orf38	NA	NA	NA	NA	C15orf38	2599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr15	90547918	90548344	90548145	Y	NA	ZNF710	NA	NA	NA	NA	ZNF710	5294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr15	90577561	90577868	90577654	Y	AP3S2,ZNF710,SEMA4B,IQGAP1	ZNF710	NA	NA	NA	NA	ZNF710	34937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	90578762	90579351	90578884	Y	ANPEP,AP3S2,ZNF710,SEMA4B,IQGAP1	ZNF710	NA	NA	NA	NA	ZNF710	36138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	90581471	90581912	90581727	Y	AP3S2,ZNF710,SEMA4B,IQGAP1	ZNF710	NA	NA	NA	NA	ZNF710	38847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	90608117	90608795	90608159	Y	ANPEP,ZNF710,IQGAP1,CIB1	IDH2	NA	NA	NA	NA	IDH2	34941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	90641433	90641611	90641526	Y	NA	IDH2	NA	NA	NA	NA	IDH2	2125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	90649995	90650276	90650136	Y	NA	IDH2	NA	NA	NA	NA	IDH2	6259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	90669829	90670140	90669985	Y	NA	IDH2,SEMA4B	IQGAP1,IDH2,MESP1,SEMA4B,C15orf58,CIB1,NGRN,TTLL13,ZNF710,C15orf38-AP3S2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	IDH2	26093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr15	90701535	90701765	90701609	Y	ZNF710,SEMA4B,IQGAP1,CIB1	SEMA4B	IDH2,ZNF710,C15orf58,TTLL13,NGRN,SEMA4B,IQGAP1,CIB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SEMA4B	71	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	90944087	90944636	90944284	Y	FES,FES,FES,ZNF710,CIB1,C15orf58,CRTC3,IQGAP1	IQGAP1	NA	NA	NA	NA	IQGAP1	14637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr15	91208661	91208996	91208948	Y	NA	RP11-387D10.2,BLM	NA	NA	NA	NA	RP11-387D10.2	49376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr15	91331328	91331736	91331526	Y	NA	NA	NA	NA	NA	NA	BLM	72770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	91412875	91413318	91412960	Y	IQGAP1,FURIN,UNC45A,FES,FES,FES	FURIN,FES,MAN2A2	NA	NA	NA	NA	FURIN	3053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	91541068	91541209	91541180	Y	NA	RCCD1,PRC1,VPS33B,AC068831.10	NA	NA	NA	NA	PRC1	4209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	92293461	92293635	92293548	Y	NA	NA	NA	NA	NA	NA	NPM1P5	533436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	93344993	93345488	93345070	Y	CHD2	ASB9P1	NA	NA	NA	NA	ASB9P1	8116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr15	93354824	93354998	93354897	Y	CHD2	ASB9P1	NA	NA	NA	NA	ASB9P1	17947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr15	93363497	93364154	93363735	Y	ST8SIA2,RGMA,RGMA,RGMA,RGMA,CHD2	ASB9P1	ASB9P1,CHD2,LOC100507217	IMR90	Hi-C	24141950	ASB9P1	26620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.507514603713869
chr15	93374780	93375598	93375185	Y	NA	ASB9P1,CHD2	CHD2,LOC100507217,ASB9P1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ASB9P1	37903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.454923217672401
chr15	93424689	93424786	93424732	Y	CHD2	CHD2	NA	NA	NA	NA	CHD2	163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	93520042	93520437	93520098	Y	CHD2	NA	NA	NA	NA	NA	CHD2	95516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	93864881	93865242	93865107	Y	NA	NA	NA	NA	NA	NA	RGMA	234448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr15	94815502	94815543	94815523	Y	NA	MCTP2	NA	NA	NA	NA	MCTP2	42735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr15	95387780	95387932	95387839	Y	NA	NA	NA	NA	NA	NA	MCTP2	615013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr15	95388455	95388700	95388578	Y	NA	NA	NA	NA	NA	NA	MCTP2	615688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr15	96807705	96807805	96807755	Y	NA	NA	LOC400456	IMR90	Hi-C	24141950	NR2F2	59362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr15	96867031	96867104	96867071	Y	NA	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	NR2F2	63	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr15	96884042	96884481	96884402	Y	NA	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	RP11-522B15.3	10985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	96890448	96891058	96890571	Y	NR2F2,NR2F2,NR2F2	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	RP11-522B15.3	4408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	96898438	96898666	96898552	Y	NA	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	RP11-522B15.3	2972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	96900187	96900329	96900243	Y	NR2F2,NR2F2	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	RP11-522B15.3	4721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr15	96900508	96900866	96900583	Y	NA	NR2F2,NR2F2-AS1,RP11-522B15.3	NA	NA	NA	NA	RP11-522B15.3	5042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	98545444	98546413	98546248	Y	NA	NA	NA	NA	NA	NA	ARRDC4	84660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr15	98964843	98965105	98964974	Y	NA	NA	NA	NA	NA	NA	FAM169B	90506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99091450	99092159	99091603	Y	NA	FAM169B	IGF1R,SYNM	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM169B	35839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	99193577	99194531	99194069	Y	IGF1R	IGF1R	NA	NA	NA	NA	IGF1R	3377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.740072935661136
chr15	99270923	99271213	99270975	Y	IGF1R	NA	NA	NA	NA	NA	IGF1R	80723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr15	99295015	99295222	99295065	Y	NA	NA	NA	NA	NA	NA	IGF1R	104815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr15	99387029	99387216	99387183	Y	NA	NA	NA	NA	NA	NA	IGF1R	196829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	99397047	99397167	99397105	Y	NA	NA	NA	NA	NA	NA	IGF1R	206847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	99408611	99408985	99408683	Y	NA	NA	NA	NA	NA	NA	IGF1R	218411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr15	99410702	99410893	99410822	Y	NA	NA	NA	NA	NA	NA	IGF1R	220502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99411740	99412504	99411960	Y	NA	NA	NA	NA	NA	NA	IGF1R	221540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99489789	99490246	99490040	Y	IGF1R	NA	NA	NA	NA	NA	SYNM	146174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	99499686	99499980	99499831	Y	NA	NA	NA	NA	NA	NA	SYNM	136440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	99708218	99708283	99708249	Y	NA	NA	SYNM	IMR90	Hi-C	24141950	SYNM	71798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99823818	99824190	99823994	Y	MEF2A,MEF2A	TTC23,LRRC28,HSP90B2P	NA	NA	NA	NA	HSP90B2P	27981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99943673	99944058	99943986	Y	NA	NA	NA	NA	NA	NA	MEF2A	71312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	99965380	99965718	99965580	Y	MEF2A,MEF2A	MEF2A	LRRC28,MEF2A,LYSMD4	IMR90	Hi-C	24141950	MEF2A	49652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr15	99995215	99995527	99995307	Y	MEF2A,MEF2A	MEF2A	MEF2A,LRRC28	IMR90	Hi-C	24141950	MEF2A	19843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	100209243	100209470	100209289	Y	NA	NA	LYSMD4	IMR90	Hi-C	24141950	LYSMD4	62296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	101261855	101262549	101262221	Y	NA	NA	ALDH1A3,LRRK1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINS	120420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	101631799	101632179	101632024	Y	CHSY1	NA	NA	NA	NA	NA	CHSY1	157958	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.70201913087513
chr15	101667290	101667533	101667378	Y	NA	NA	CHSY1,SELS,LRRK1	IMR90	Hi-C	24141950	CHSY1	122604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	101783359	101783726	101783540	Y	CHSY1	CHSY1,VIMP,SNRPA1	NA	NA	NA	NA	CHSY1	6411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	101790495	101790968	101790609	Y	NA	CHSY1,VIMP,SNRPA1	NA	NA	NA	NA	CHSY1	358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr15	101818299	101818511	101818407	Y	NA	CHSY1,VIMP,SNRPA1	NA	NA	NA	NA	VIMP	2594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	101834172	101834455	101834316	Y	TM2D3,TARSL2,SNRPA1	CHSY1,VIMP,SNRPA1	NA	NA	NA	NA	SNRPA1	685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr15	101937691	101937800	101937746	Y	OR4F6,OR4F15,TM2D3,PCSK6	NA	NA	NA	NA	NA	SNRPA1	104204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr15	101979646	101980007	101979833	Y	PCSK6	NA	NA	NA	NA	NA	PCSK6	83398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.647049602882229
chr15	101986303	101986813	101986523	Y	CHSY1,TM2D3	NA	NA	NA	NA	NA	PCSK6	76592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr15	101986946	101987282	101987113	Y	CHSY1,TM2D3	NA	NA	NA	NA	NA	PCSK6	76123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341192285352501
chr15	102156175	102156504	102156244	Y	NA	TM2D3	PCSK6,SNRPA1,TM2D3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TM2D3	34090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	121563	121849	121614	Y	TMEM8A,PIGQ,PIGQ,NME4,MRPL28,ITFG3,DECR2,RHBDF1,MPG,MPG	SNRNP25,POLR3K,RHBDF1,MPG	NA	NA	NA	NA	RHBDF1	2505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	124533	124922	124605	Y	NA	SNRNP25,POLR3K,RHBDF1,MPG	NA	NA	NA	NA	MPG	84	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	389816	389946	389892	Y	NA	AXIN1,MRPL28,TMEM8A	NA	NA	NA	NA	AXIN1	10727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr16	578748	579156	578911	Y	LUC7L	C16orf11,PIGQ,NHLRC4	NA	NA	NA	NA	C16orf11	29266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr16	615969	616302	616108	Y	RGS11,NHLRC4	C16orf11,PIGQ,NHLRC4,RAB40C	NA	NA	NA	NA	NHLRC4	973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	643606	643989	643708	Y	SSTR5,RAB40C,RAB40C	C16orf11,PIGQ,NHLRC4,RAB40C,WFIKKN1,C16orf13,FAM195A	NA	NA	NA	NA	RAB40C	6249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	651803	652154	651979	Y	NA	C16orf11,PIGQ,NHLRC4,RAB40C,WFIKKN1,C16orf13,FAM195A,AL022341.3,WDR90	NA	NA	NA	NA	RAB40C	14446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	729341	729555	729445	Y	NA	C16orf13,FAM195A,AL022341.3,WDR90,RHOT2,RHBDL1,STUB1,JMJD8,WDR24,METRN,FAM173A,HAGHL	NA	NA	NA	NA	STUB1	1117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.810411854486371
chr16	1132307	1132794	1132674	Y	RAB40C,RAB40C,WDR90,CACNA1H,SSTR5	SSTR5	NA	NA	NA	NA	SSTR5	11551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.494532521417257
chr16	1133120	1133226	1133175	Y	RAB40C,RAB40C,FAM195A,WDR90,CACNA1H,SSTR5	SSTR5	NA	NA	NA	NA	SSTR5	12364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr16	1209498	1209681	1209611	Y	CACNA1H	CACNA1H	NA	NA	NA	NA	CACNA1H	8257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr16	1341001	1341384	1341186	Y	CACNA1H,BAIAP3	UBE2I,BAIAP3	UBE2I,UNKL	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	UBE2I	12164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	1344323	1344595	1344461	Y	NA	UBE2I,BAIAP3	UNKL	IMR90	Hi-C	24141950	UBE2I	8953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	1349375	1349723	1349678	Y	NA	UBE2I,BAIAP3	NA	NA	NA	NA	UBE2I	3825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr16	1381826	1382192	1381930	Y	UNKL,SPSB3,MAPK8IP3,EME2,BAIAP3,BAIAP3	UBE2I,BAIAP3,GNPTG	NA	NA	NA	NA	BAIAP3	224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr16	1522812	1522824	1522818	Y	MAPK8IP3,CLCN7	C16orf91,CLCN7,TELO2	NA	NA	NA	NA	CLCN7	757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	1979729	1980160	1979842	Y	TSC2,MLST8,DNASE1L2,C16orf79,ABCA3,CCDC154,NME3,NUBP2,TBL3,RNF151	NDUFB10,SNORA64,RPS2,SNHG9,TBL3	NUBP2,FAHD1,IGFALS,C16orf73,HS3ST6,MAPK8IP3,SPSB3,EME2,NME3,MRPS34,HAGH,LINC00254	IMR90	Hi-C	24141950	NDUFB10	27349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	2057211	2057401	2057386	Y	NA	NDUFB10,SNORA64,RPS2,SNHG9,TBL3,GFER,SYNGR3,ZNF598,NPW,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	ZNF598	423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	2057818	2059084	2058234	Y	TRAF7,ECI1,HN1L,EME2,ZNF598	SNORA64,RPS2,SNHG9,TBL3,GFER,SYNGR3,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	ZNF598,NPW	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	2065446	2065768	2065545	Y	NA	TBL3,GFER,SYNGR3,ZNF598,NPW,SLC9A3R2,TSC2,NTHL1	RAB26	MCF7	ChIA-PET	22265404	NPW	7519	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	2104972	2105164	2105052	Y	NA	ZNF598,NPW,SLC9A3R2,TSC2,NTHL1	NA	NA	NA	NA	NTHL1	9105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	2212881	2213081	2213004	Y	NA	RAB26,SNORD60,TRAF7,CASKIN1,MLST8,PGP	NA	NA	NA	NA	TRAF7	9182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.317525130661482
chr16	2478608	2478672	2478640	Y	RPS2,RNF151,TBL3,GFER,NTHL1,TSC2,TRAF7,MLST8,MLST8,DNASE1L2,ECI1,TCEB2,FLYWCH2	CCNF,C16orf59,NTN3,TBC1D24	NA	NA	NA	NA	CCNF	1213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	2582505	2583298	2582685	Y	RAB26,E4F1,SRRM2,ATP6V0C,ATP6V0C,AMDHD2,CEMP1,PDPK1	ATP6V0C,AMDHD2,PDPK1	NA	NA	NA	NA	PDPK1	2667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr16	2657653	2657823	2657765	Y	NA	NA	NA	NA	NA	NA	ERVK13-1	63622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	2845811	2846048	2845884	Y	OR1F1,ZNF200,ZNF200,ZNF200,MEFV,ATP6V0C,ATP6V0C,PDPK1,SRRM2	SRRM2,TCEB2,ZG16B,PRSS30P	NA	NA	NA	NA	TCEB2	20513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	2885761	2886144	2885824	Y	NA	ZG16B,PRSS30P,FLYWCH2	NA	NA	NA	NA	PRSS30P	4601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233049958119541
chr16	2917931	2918273	2918246	Y	NA	ZG16B,PRSS30P,FLYWCH2,FLYWCH1	PRSS22,LOC100128788,PRSS27,SRRM2,PRSS33,PRSS41,TCEB2,PAQR4,PKMYT1,FLYWCH1,FLYWCH2,KREMEN2,ZG16B,PRSS30P,PRSS21	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	FLYWCH2	12914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.801212481939568
chr16	3031604	3031823	3031757	Y	PAQR4	KREMEN2,PAQR4,PKMYT1,CLDN9,TNFRSF12A,CLDN6,THOC6,HCFC1R1	NA	NA	NA	NA	PKMYT1	3064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.309308498852027
chr16	3053798	3054225	3053960	Y	NA	KREMEN2,PAQR4,PKMYT1,CLDN9,TNFRSF12A,CLDN6,THOC6,HCFC1R1	NA	NA	NA	NA	CLDN9	6232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.473824921876264
chr16	3055976	3056164	3056082	Y	NA	KREMEN2,PAQR4,PKMYT1,CLDN9,TNFRSF12A,CLDN6,THOC6,HCFC1R1	NA	NA	NA	NA	CLDN9	4293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.278247355344137
chr16	3136218	3136620	3136421	Y	NA	IL32,ZNF205,ZNF213	NA	NA	NA	NA	IL32	22920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr16	3156056	3156304	3156227	Y	PAQR4,OR2C1,CLUAP1,OR1F1	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	4257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	3156518	3156937	3156694	Y	PAQR4,CLUAP1,ZNF205	IL32,ZNF205,ZNF213	NA	NA	NA	NA	ZNF205	3624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.413177001770104
chr16	3200393	3200919	3200597	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	22615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.356642808234065
chr16	3202363	3202472	3202417	Y	NA	ZNF205,ZNF213	NA	NA	NA	NA	ZNF213	24585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	3221173	3221513	3221502	Y	NA	ZNF213	NA	NA	NA	NA	ZNF213	43395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	3237977	3238591	3238121	Y	NA	ZNF200	ZNF200	K562	ChIA-PET	22265404	ZNF200	45630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr16	3309129	3309539	3309316	Y	MMP25,NAT15,NAT15,ZNF200,ZNF200,ZNF200,MEFV	ZNF200,ZNF263,ZNF75A	NA	NA	NA	NA	ZNF263	2204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	3414643	3415237	3414919	Y	NA	MTRNR2L4,ZNF174	NA	NA	NA	NA	MTRNR2L4	5046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.551889357945881
chr16	3763227	3763392	3763351	Y	NA	TRAP1	NA	NA	NA	NA	TRAP1	2206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	3858926	3859164	3859045	Y	NA	NA	NA	NA	NA	NA	CREBBP	69563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	3889135	3889287	3889211	Y	NA	CREBBP	NA	NA	NA	NA	CREBBP	39440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	3931357	3931444	3931401	Y	C16orf90	CREBBP	NA	NA	NA	NA	CREBBP	2630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	4186619	4186736	4186682	Y	NA	ADCY9	CREBBP,ADCY9,SRL,TRAP1,CORO7-PAM16,PAM16	IMR90	Hi-C	24141950	ADCY9	22433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	4233647	4234082	4234013	Y	NA	NA	NA	NA	NA	NA	ADCY9	69461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.600868953313086
chr16	4321625	4322178	4321908	Y	ZNF500,PAM16,MGRN1,HMOX2,FAM100A,C16orf5,C16orf5,ANKS3,TFAP4	TFAP4	NA	NA	NA	NA	TFAP4	549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.927433870383807
chr16	4349200	4349352	4349284	Y	NA	TFAP4	ADCY9,TFAP4,CREBBP,VASN,CORO7-PAM16	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TFAP4	28124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	4357393	4358110	4357824	Y	CORO7	TFAP4,PAM16	ADCY9,CREBBP,TFAP4,LOC100507501,VASN,CORO7-PAM16	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TFAP4	36317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr16	4420946	4421237	4421026	Y	NA	PAM16,VASN	NA	NA	NA	NA	VASN	1097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr16	4422682	4422871	4422704	Y	NA	PAM16,VASN	NA	NA	NA	NA	VASN	2833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr16	4426208	4426420	4426289	Y	NA	PAM16,VASN,CORO7,DNAJA3	NA	NA	NA	NA	VASN	6359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	4587360	4587817	4587427	Y	HMOX2,PPL,C16orf5,C16orf5	NMRAL1	NA	NA	NA	NA	NMRAL1	43596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.348586274169372
chr16	4666118	4666710	4666381	Y	NA	MGRN1	NA	NA	NA	NA	MGRN1	1624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.464454118646714
chr16	4713771	4714092	4713866	Y	CORO7,NAGPA,GLYR1,MGRN1	MGRN1,NUDT16L1	NA	NA	NA	NA	NUDT16L1	27603	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.49838503027832
chr16	4818680	4818913	4818758	Y	C16orf5,C16orf5,SEC14L5,ROGDI	C16orf71,ANKS3,ZNF500,ROGDI	NA	NA	NA	NA	ZNF500	3055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.53545558271977
chr16	4900331	4900638	4900507	Y	MGRN1,UBN1,UBN1	ROGDI,UBN1,GLYR1	NA	NA	NA	NA	GLYR1	4988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	4944877	4945061	4944987	Y	HMOX2,C16orf5,C16orf5,LOC342346,C16orf71,SEPT12,SEC14L5,ROGDI	GLYR1	NA	NA	NA	NA	GLYR1	49534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	4985283	4985359	4985321	Y	NA	SEC14L5,PPL	NA	NA	NA	NA	SEC14L5	20959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	4993356	4993730	4993477	Y	PPL	SEC14L5,PPL	UBN1,GLYR1,PPL,ROGDI,NUDT16L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SEC14L5	12588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.230421419789826
chr16	5085449	5085725	5085546	Y	NA	ALG1,NAGPA,C16orf89	NA	NA	NA	NA	NAGPA	3307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.444569162098305
chr16	6380642	6380873	6380664	Y	NA	NA	NA	NA	NA	NA	FAM86A	1234833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	8931520	8931573	8931545	Y	NA	TMEM186,CARHSP1	NA	NA	NA	NA	CARHSP1	29293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	8939360	8939674	8939516	Y	USP7	TMEM186,CARHSP1	NA	NA	NA	NA	CARHSP1	21192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	8950746	8950997	8950816	Y	NA	CARHSP1	NA	NA	NA	NA	CARHSP1	9869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	8985326	8985575	8985451	Y	NA	CARHSP1	NA	NA	NA	NA	CARHSP1	24460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	9055639	9056008	9055791	Y	C16orf72,USP7	USP7	NA	NA	NA	NA	USP7	363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.812880295071323
chr16	9141634	9142026	9141729	Y	NA	C16orf72	USP7,C16orf72	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	C16orf72	41479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	9147014	9147397	9147240	Y	ABAT	C16orf72	USP7,C16orf72	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	C16orf72	36108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr16	9162231	9162510	9162397	Y	NA	C16orf72	USP7,C16orf72	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	C16orf72	20995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	9208363	9208890	9208559	Y	NA	C16orf72	NA	NA	NA	NA	C16orf72	24858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	9221431	9221974	9221622	Y	USP7,C16orf72	C16orf72	NA	NA	NA	NA	C16orf72	37926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	9277609	9277994	9277792	Y	NA	NA	ATF7IP2	IMR90	Hi-C	24141950	C16orf72	94104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	10549193	10549271	10549232	Y	EMP2	NA	NA	NA	NA	NA	EMP2	123284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	10563450	10564010	10563797	Y	NA	NA	NA	NA	NA	NA	EMP2	108545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	10672211	10672611	10672411	Y	ATF7IP2,EMP2	NA	NA	NA	NA	NA	EMP2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	10710369	10710537	10710438	Y	NA	EMP2	NA	NA	NA	NA	EMP2	37814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	10710964	10711341	10711185	Y	EMP2	EMP2	NA	NA	NA	NA	EMP2	38409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr16	10746944	10747196	10747087	Y	NA	NA	NA	NA	NA	NA	EMP2	74389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr16	10962462	10962962	10962665	Y	NUBP1,SOCS1,CIITA	NA	NA	NA	NA	NA	DEXI	71355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11032093	11032474	11032340	Y	NA	DEXI,CLEC16A	NA	NA	NA	NA	DEXI	1843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr16	11058771	11058999	11058871	Y	CIITA,SOCS1,CLEC16A	DEXI,CLEC16A	NA	NA	NA	NA	CLEC16A	22426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	11126143	11126448	11126303	Y	NA	NA	NA	NA	NA	NA	CLEC16A	89798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	11155783	11156117	11155981	Y	NA	NA	NA	NA	NA	NA	CLEC16A	119438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	11188261	11188580	11188312	Y	NA	NA	NA	NA	NA	NA	CLEC16A	151916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11336726	11336842	11336760	Y	LITAF,LITAF	RMI2,SOCS1,PRM2,PRM1	NA	NA	NA	NA	RMI2	4634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11352629	11352834	11352732	Y	SNN,LITAF,CIITA,SOCS1	RMI2,SOCS1,PRM2,PRM1	NA	NA	NA	NA	SOCS1	4593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11391500	11391628	11391615	Y	ZC3H7A,TXNDC11,LITAF,CIITA,SOCS1	SOCS1,PRM2,PRM1	SOCS1,DEXI,CLEC16A,PRM2,PRM3,TNP2,RMI2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PRM1	18293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr16	11402836	11403053	11402974	Y	SOCS1	PRM2,PRM1	CLEC16A,TNP2,RMI2,ZC3H7A,BCAR4	IMR90	Hi-C	24141950	PRM1	29629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr16	11405627	11405832	11405704	Y	NA	PRM2,PRM1	CLEC16A	IMR90	Hi-C	24141950	PRM1	32420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	11407202	11407368	11407306	Y	NA	PRM2,PRM1	CLEC16A	IMR90	Hi-C	24141950	PRM1	33995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11590987	11591512	11591296	Y	NA	NA	SNN,TXNDC11,CLEC16A,LITAF	IMR90	Hi-C	24141950	LITAF	136725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.530027586984793
chr16	11591931	11591962	11591945	Y	NA	NA	SNN,TXNDC11,CLEC16A,LITAF	IMR90	Hi-C	24141950	LITAF	136275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr16	11644813	11645143	11645061	Y	NA	NA	NA	NA	NA	NA	LITAF	83094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	11662178	11662507	11662365	Y	NA	NA	NA	NA	NA	NA	LITAF	65730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11670817	11671132	11670939	Y	SOCS1,ZC3H7A,TXNDC11,RUNDC2A,SNN,LITAF,LITAF	NA	NA	NA	NA	NA	LITAF	57105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.58114460611664
chr16	11702109	11702428	11702257	Y	SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN	LITAF	LITAF,TXNDC11,SNN,CLEC16A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LITAF	25809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	11705983	11706695	11706338	Y	SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN	LITAF	LITAF,TXNDC11,SNN,CLEC16A,RSL1D1,BCAR4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LITAF	21542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	11707277	11708060	11707802	Y	SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN	LITAF	TXNDC11,CLEC16A,LITAF,RSL1D1,BCAR4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LITAF	20177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	11726508	11726794	11726693	Y	NA	LITAF,SNN	CLEC16A,LITAF,TXNDC11,SNN	IMR90	Hi-C	24141950	LITAF	1443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr16	11734091	11734770	11734262	Y	SOCS1,ZC3H7A,TXNDC11,RUNDC2A,LITAF,LITAF,SNN	LITAF,SNN	TXNDC11,SNN,CLEC16A,LITAF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LITAF	5854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	11890330	11890418	11890367	Y	LITAF,LITAF,SNN,RUNDC2A,TXNDC11,ZC3H7A	ZC3H7A	NA	NA	NA	NA	ZC3H7A	1207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr16	11946483	11946539	11946512	Y	NA	RSL1D1	NA	NA	NA	NA	RSL1D1	3041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	11955170	11955449	11955310	Y	NA	RSL1D1	ZC3H7A,RSL1D1,BCAR4	IMR90	Hi-C	24141950	RSL1D1	11728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	11960558	11960748	11960653	Y	NA	RSL1D1,GSPT1	ZC3H7A,RSL1D1,BCAR4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RSL1D1	17116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	11968147	11968344	11968329	Y	ZC3H7A	RSL1D1,GSPT1	RSL1D1	IMR90	Hi-C	24141950	RSL1D1	24705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.461002937324415
chr16	12008398	12008797	12008598	Y	NA	GSPT1	NA	NA	NA	NA	GSPT1	459	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.10279546354722
chr16	12630003	12630276	12630127	Y	NA	NA	NA	NA	NA	NA	CPPED1	265598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	12638973	12639326	12639170	Y	CPPED1	NA	NA	NA	NA	NA	CPPED1	256548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	12713340	12713716	12713664	Y	NA	NA	SNX29	IMR90	Hi-C	24141950	CPPED1	182158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	12761788	12762198	12762001	Y	NA	NA	NA	NA	NA	NA	CPPED1	133676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	12861809	12861981	12861895	Y	NA	CPPED1	NA	NA	NA	NA	CPPED1	33893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	14051699	14052037	14051838	Y	NA	ERCC4	NA	NA	NA	NA	ERCC4	39685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	14379572	14379808	14379698	Y	NA	NA	NA	NA	NA	NA	MKL2	216394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	14395683	14396371	14395873	Y	MKL2	NA	NA	NA	NA	NA	MKL2	232505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr16	14396583	14397514	14397260	Y	NA	NA	NA	NA	NA	NA	MKL2	233405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	14397958	14398068	14398015	Y	NA	NA	NA	NA	NA	NA	MKL2	234780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	14423320	14423633	14423477	Y	NA	NA	NA	NA	NA	NA	MKL2	260142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	14423689	14423899	14423743	Y	NA	NA	NA	NA	NA	NA	MKL2	260511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	14424623	14424858	14424825	Y	NA	NA	NA	NA	NA	NA	MKL2	261445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	14599774	14599935	14599866	Y	NA	NA	NA	NA	NA	NA	PARN	124650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr16	15069619	15069687	15069631	Y	PDXDC1	PDXDC1	NA	NA	NA	NA	PDXDC1	3171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	15140552	15140757	15140655	Y	NA	NTAN1	NA	NA	NA	NA	NTAN1	7164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	15498743	15498890	15498817	Y	NA	MPV17L,C16orf45	NA	NA	NA	NA	MPV17L	11132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	15576237	15576428	15576343	Y	NA	NA	NA	NA	NA	NA	C16orf45	50085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	15583408	15583655	15583541	Y	NDE1,C16orf45	NA	KIAA0430	IMR90	Hi-C	24141950	C16orf45	57256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr16	15670640	15671032	15670885	Y	NA	NA	NA	NA	NA	NA	KIAA0430	63991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189989473052387
chr16	15684514	15685137	15684868	Y	NDE1,NDE1,KIAA0430	KIAA0430,NDE1	NA	NA	NA	NA	KIAA0430	49886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr16	15738027	15738375	15738313	Y	NA	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	2903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243895128258711
chr16	15766344	15766530	15766415	Y	C16orf45	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	31220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	15766632	15767024	15766843	Y	KIAA0430,NDE1,NDE1	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	31508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285149717988735
chr16	15769690	15769796	15769712	Y	NA	KIAA0430,NDE1	NA	NA	NA	NA	NDE1	34566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	15979661	15979785	15979715	Y	NA	FOPNL,RPL15P20	NA	NA	NA	NA	FOPNL	697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	16055043	16055430	16055122	Y	NDE1,NDE1,ABCC1	RPL15P20,ABCC1	NA	NA	NA	NA	ABCC1	13609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	16131643	16131874	16131759	Y	NA	NA	NA	NA	NA	NA	ABCC1	90209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	16242630	16242651	16242642	Y	NA	NA	NA	NA	NA	NA	NOMO3	81701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr16	17257893	17258025	17257960	Y	XYLT1	NA	NA	NA	NA	NA	NOMO3	933541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	19106464	19106699	19106563	Y	NA	COQ7,ITPRIPL2	NA	NA	NA	NA	ITPRIPL2	16555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.284327074996151
chr16	19532119	19532450	19532314	Y	CCP110	RNU4-46P,GDE1,CCP110,C16orf62	NA	NA	NA	NA	GDE1	652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	19714468	19714843	19714656	Y	NA	IQCK	NA	NA	NA	NA	IQCK	10935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	19822629	19822921	19822772	Y	NA	NA	GPRC5B	IMR90	Hi-C	24141950	GPRC5B	72568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	19843151	19843406	19843180	Y	NA	NA	NA	NA	NA	NA	GPRC5B	52083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	20729381	20729771	20729568	Y	LYRM1,DCUN1D3	THUMPD1	NA	NA	NA	NA	THUMPD1	21635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr16	20794412	20794561	20794511	Y	PDILT,LOC81691	THUMPD1	NA	NA	NA	NA	THUMPD1	43006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	20877631	20877934	20877768	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	LYRM1	31256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	20908672	20908960	20908809	Y	CRYM,LYRM1,DCUN1D3	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	LYRM1	230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	20910017	20910139	20910077	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	20910424	20910792	20910538	Y	NA	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	20915885	20916169	20915941	Y	CRYM,DCUN1D3,LYRM1	LYRM1,ERI2,DCUN1D3	NA	NA	NA	NA	DCUN1D3	6179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	21295163	21295477	21295440	Y	NA	CRYM-AS1,CRYM	NA	NA	NA	NA	CRYM-AS1	14693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	21313038	21313456	21313158	Y	NA	CRYM-AS1,CRYM	NA	NA	NA	NA	CRYM	634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr16	21375136	21375337	21375232	Y	DNAH3,CRYM,METTL9	NA	NA	NA	NA	NA	CRYM	62732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	21566198	21566360	21566279	Y	DNAH3	SLC7A5P2,CTD-2547E10.2,METTL9	METTL9,IGSF6	IMR90	Hi-C	24141950	CTD-2547E10.2	36433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	21611842	21611954	21611919	Y	CRYM,IGSF6,METTL9	METTL9	NA	NA	NA	NA	METTL9	5303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	22046502	22046742	22046619	Y	NA	C16orf52	NA	NA	NA	NA	C16orf52	29543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246363568843663
chr16	22201170	22202123	22201439	Y	POLR3E,CDR2	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	13480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	22202219	22202462	22202295	Y	NA	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	13141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.330838741385604
chr16	22202596	22202946	22202679	Y	POLR3E,CDR2	EEF2K	UQCRC2,POLR3E,PDZD9,C16orf52,VWA3A,EEF2K	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	12657	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.66971351731363
chr16	22203475	22203890	22203761	Y	POLR3E	EEF2K	UQCRC2,POLR3E,EEF2K,PDZD9,C16orf52	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	11713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.533318670562329
chr16	22207042	22207397	22207176	Y	NA	EEF2K	POLR3E,EEF2K,C16orf52	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EEF2K	8206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr16	22211037	22211162	22211126	Y	NA	EEF2K	POLR3E,EEF2K	MCF7,K562	ChIA-PET	22265404	EEF2K	4441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	22349127	22349159	22349143	Y	POLR3E	POLR3E	NA	NA	NA	NA	POLR3E	42397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	22366801	22367164	22366982	Y	POLR3E,CDR2	NA	NA	NA	NA	NA	POLR3E	60071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	22421466	22421891	22421890	Y	NA	CDR2,RRN3P3	NA	NA	NA	NA	CDR2	24595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	22432961	22433094	22433028	Y	NA	CDR2,RRN3P3	NA	NA	NA	NA	CDR2	13392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	23419986	23420351	23420270	Y	NA	COG7	NA	NA	NA	NA	COG7	42150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	23455511	23455803	23455657	Y	SCNN1G	COG7	NA	NA	NA	NA	COG7	6698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	23508487	23508934	23508786	Y	GGA2	COG7,GGA2	NA	NA	NA	NA	GGA2	22382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	23531974	23532033	23532005	Y	NA	GGA2,UBFD1,EARS2	NA	NA	NA	NA	GGA2	658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr16	23693851	23693869	23693860	Y	NA	PALB2,DCTN5,PLK1	NA	NA	NA	NA	PLK1	6874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	24077587	24077959	24077773	Y	PRKCB	NA	NA	NA	NA	NA	PRKCB	232265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	24855986	24856230	24856033	Y	NA	SLC5A11	NA	NA	NA	NA	SLC5A11	824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr16	24865270	24865636	24865496	Y	SLC5A11	SLC5A11	ARHGAP17	IMR90	Hi-C	24141950	SLC5A11	10108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	25005690	25005854	25005767	Y	NA	ARHGAP17	NA	NA	NA	NA	ARHGAP17	19133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr16	25025498	25025977	25025718	Y	NA	ARHGAP17	NA	NA	NA	NA	ARHGAP17	511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	25121755	25122029	25121858	Y	SLC5A11	LCMT1	NA	NA	NA	NA	LCMT1	705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	25564339	25564353	25564346	Y	NA	NA	NA	NA	NA	NA	ZKSCAN2	297087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	25565030	25565326	25565178	Y	NA	NA	NA	NA	NA	NA	ZKSCAN2	297778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	27254406	27254878	27254778	Y	IL4R	NSMCE1	NA	NA	NA	NA	NSMCE1	23237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr16	27278659	27278775	27278715	Y	JMJD5	NSMCE1,IL4R	NA	NA	NA	NA	NSMCE1	544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	27326906	27327374	27327287	Y	KIAA0556,IL4R	NSMCE1,IL4R	NA	NA	NA	NA	IL4R	3917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	27334573	27334825	27334616	Y	NA	IL4R	NA	NA	NA	NA	IL4R	11584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr16	27338285	27338559	27338369	Y	KIAA0556,IL4R	IL4R	NA	NA	NA	NA	IL4R	15296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	27419263	27419728	27419506	Y	JMJD5,JMJD5,IL21R,IL21R	NA	NA	NA	NA	NA	IL4R	96274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	27533512	27533805	27533694	Y	JMJD5,JMJD5,IL21R,KIAA0556,GTF3C1	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	25429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr16	27546889	27546978	27546937	Y	NA	GTF3C1,KIAA0556	NA	NA	NA	NA	GTF3C1	12256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr16	27620703	27620731	27620720	Y	NA	NA	NA	NA	NA	NA	KIAA0556	61249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	28160349	28160575	28160437	Y	SULT1A1,SULT1A1,APOBR,XPO6	NA	NA	NA	NA	NA	XPO6	60666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	28176884	28177249	28177153	Y	SULT1A1,SULT1A1,APOBR,XPO6	XPO6	NA	NA	NA	NA	XPO6	43992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	28496890	28497119	28497100	Y	NA	APOBR,CLN3	NA	NA	NA	NA	APOBR	6851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	28839972	28840187	28840086	Y	CCDC101,LAT,LAT,SH2B1,SH2B1,SH2B1,NFATC2IP	ATXN2L,TUFM,SH2B1	NA	NA	NA	NA	ATXN2L	7616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr16	29709853	29709969	29709906	Y	QPRT	SPN,QPRT	NA	NA	NA	NA	QPRT	37253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr16	29836551	29836761	29836656	Y	NA	KIF22,MAZ,PRRT2,MVP,CDIPT	NA	NA	NA	NA	MVP	6836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	30427925	30428543	30428281	Y	HIRIP3,ZNF48	TBC1D10B,ZNF48,SEPT1,ZNF771,SNORA42,DCTPP1,SEPHS2	NA	NA	NA	NA	SNORA42	537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr16	30458943	30459145	30459094	Y	SEPHS2	ZNF771,SNORA42,DCTPP1,SEPHS2,ITGAL	NA	NA	NA	NA	SEPHS2	3441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr16	30545067	30545182	30545127	Y	ZNF764	ZNF768,AC002310.12,ZNF747,ZNF764,AC002310.7,ZNF688	NA	NA	NA	NA	ZNF747	894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.627656272506093
chr16	30645556	30645885	30645776	Y	CORO1A,ZNF48,ZNF48,ZNF48,ZNF48,ITGAL,ZNF646,SRCAP,RNF40,PHKG2,MYST1,C16orf93,ZNF747,ZNF764,ZNF688,ZNF689,PRR14	ZNF689,PRR14,FBRS	PPP4C,PRR14,ITGAL,ZNF785,TBC1D10B,FBRS,TBX6,GDPD3,YPEL3,MAPK3,ZNF48,SEPT1,MYLPF,DCTPP1,SEPHS2,ZNF771,ZNF764,ZNF688,ZNF689,SRCAP,ZNF768	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF689	12223	CAGE	HepG2 ENCODE	hg19	FANTOM5	9.16387567761255
chr16	30825606	30826012	30825883	Y	NA	ZNF629	ZNF629,RNF40,MIR4519	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF629	29083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.337741104030202
chr16	30855963	30856257	30856110	Y	NA	MIR4519,BCL7C,CTF1	CTF1,BCL7C,MIR762,FBXL19,FBXL19-AS1	MCF7,K562	ChIA-PET	22265404	MIR4519	28387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.275778914759185
chr16	30885980	30886229	30886174	Y	ZNF689,PHKG2,RNF40,C16orf93,ZNF668	MIR4519,BCL7C,CTF1,FBXL19,FBXL19-AS1	NA	NA	NA	NA	MIR4519	1336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.27315037642947
chr16	31129616	31130225	31129940	Y	ARMC5,STX4,PYCARD,ITGAX,ITGAM,ZNF668,ZNF668,ZNF646,MYST1,FUS	ZNF646,PRSS53,VKORC1,BCKDK,KAT8,PRSS8	NA	NA	NA	NA	KAT8	4541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	31264985	31265278	31265093	Y	STX4,ZNF668,ZNF646,MYST1,ITGAX,PYCARD,ITGAM	NA	NA	NA	NA	NA	PYCARD	52214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	31887367	31887596	31887374	Y	NA	ZNF267	NA	NA	NA	NA	ZNF267	4288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	31888684	31889219	31888998	Y	ARMC5,ZNF267	ZNF267	NA	NA	NA	NA	ZNF267	5605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	31891820	31892363	31891972	Y	ARMC5,ZNF267	ZNF267	NA	NA	NA	NA	ZNF267	8741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	31905713	31906088	31906002	Y	ZNF267	ZNF267	NA	NA	NA	NA	ZNF267	22634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr16	33509690	33509798	33509723	Y	NA	NA	NA	NA	NA	NA	ZNF267	1626611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	34377841	34378195	34377988	Y	NA	NA	NA	NA	NA	NA	ZNF267	2494762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	46780849	46781142	46780994	Y	MYLK3	MYLK3	NA	NA	NA	NA	MYLK3	41177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	46792369	46792477	46792422	Y	MYLK3	MYLK3	MYLK3,C16orf87	IMR90	Hi-C	24141950	MYLK3	29842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	46823783	46824029	46823881	Y	NA	MYLK3,C16orf87	NA	NA	NA	NA	MYLK3	1464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.921354150731795
chr16	46863838	46864241	46863904	Y	NA	MYLK3,C16orf87	NA	NA	NA	NA	C16orf87	515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	46920520	46920743	46920636	Y	NA	GPT2	NA	NA	NA	NA	GPT2	4230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	47281592	47281819	47281707	Y	NA	NA	NA	NA	NA	NA	NETO2	105684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	47324349	47324747	47324746	Y	NA	NA	NA	NA	NA	NA	NETO2	148441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	47526942	47527306	47527022	Y	PHKB	PHKB,ITFG1	NA	NA	NA	NA	ITFG1	30882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.354505896076623
chr16	48373783	48374217	48374017	Y	LONP2,N4BP1,SIAH1	NA	NA	NA	NA	NA	LONP2	97576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	48400459	48400723	48400564	Y	LONP2,N4BP1,SIAH1	NA	NA	NA	NA	NA	SIAH1	79590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr16	48417730	48418013	48418003	Y	N4BP1,SIAH1,SIAH1	NA	NA	NA	NA	NA	SIAH1	62300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr16	48570287	48570591	48570516	Y	N4BP1	NA	NA	NA	NA	NA	N4BP1	81468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	48592202	48592453	48592359	Y	SIAH1,N4BP1	NA	NA	NA	NA	NA	N4BP1	59606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	48593216	48593689	48593553	Y	NA	NA	NA	NA	NA	NA	N4BP1	58370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	48610830	48611144	48611073	Y	SIAH1,N4BP1	N4BP1	NA	NA	NA	NA	N4BP1	40915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	48645394	48646040	48645807	Y	SIAH1,N4BP1	N4BP1	NA	NA	NA	NA	N4BP1	6019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr16	48646666	48646732	48646686	Y	SIAH1,N4BP1	N4BP1	NA	NA	NA	NA	N4BP1	5327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	48657602	48657960	48657802	Y	SIAH1,N4BP1	N4BP1	ABCC11,SIAH1,MIR548AE2,N4BP1	IMR90	Hi-C	24141950	N4BP1	5543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr16	50101332	50101352	50101341	Y	NA	HEATR3	NA	NA	NA	NA	HEATR3	3480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	50219057	50219422	50219113	Y	NA	PAPD5	NA	NA	NA	NA	PAPD5	34228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr16	50229271	50229507	50229375	Y	NA	PAPD5	NA	NA	NA	NA	PAPD5	44442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	50236881	50237262	50237048	Y	NA	NA	NA	NA	NA	NA	PAPD5	52052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	50336956	50337409	50337067	Y	NA	NA	NA	NA	NA	NA	BRD7	63436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr16	50376082	50376389	50376371	Y	NA	BRD7	NA	NA	NA	NA	BRD7	24456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr16	50501772	50501939	50501899	Y	NA	NA	NKD1	IMR90	Hi-C	24141950	NKD1	78302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr16	50554457	50554868	50554623	Y	BRD7,NKD1	NKD1	NKD1	IMR90	Hi-C	24141950	NKD1	25373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.63800981647299
chr16	50573093	50573439	50573278	Y	BRD7,NKD1	NKD1	NKD1	IMR90	Hi-C	24141950	NKD1	6802	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.11709181500868
chr16	50679822	50680132	50679910	Y	NA	NOD2	NA	NA	NA	NA	NOD2	45382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr16	51179674	51179928	51179801	Y	NA	SALL1	NA	NA	NA	NA	SALL1	3350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	51182471	51182868	51182589	Y	SALL1,SALL1	SALL1	NA	NA	NA	NA	SALL1	410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	51183106	51183414	51183179	Y	SALL1,SALL1	NA	NA	NA	NA	NA	SALL1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.70547031219743
chr16	51186041	51186738	51186313	Y	NA	SALL1	NA	NA	NA	NA	SALL1	2763	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.0312937183248
chr16	51186928	51187269	51186986	Y	NA	SALL1	NA	NA	NA	NA	SALL1	3650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	51572702	51572897	51572800	Y	NA	NA	SALL1	IMR90	Hi-C	24141950	HNRNPA1P48	104770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	52489873	52490156	52490047	Y	NA	NA	NA	NA	NA	NA	TOX3	89558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	52526808	52526987	52526898	Y	TOX3,TOX3	NA	NA	NA	NA	NA	TOX3	52727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.57029943597747
chr16	52564240	52564587	52564414	Y	TOX3	TOX3	NA	NA	NA	NA	TOX3	15127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	52579555	52579603	52579574	Y	NA	TOX3	NA	NA	NA	NA	TOX3	111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	52854151	52854308	52854232	Y	NA	NA	NA	NA	NA	NA	RP11-297L17.6	166935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	53075249	53075847	53075790	Y	NA	CHD9	CHD9	IMR90	Hi-C	24141950	CHD9	11098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	53086726	53087108	53087065	Y	NA	NA	NA	NA	NA	NA	CHD9	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	53089565	53089820	53089729	Y	NA	CHD9	NA	NA	NA	NA	CHD9	2620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	53095278	53095286	53095282	Y	NA	CHD9	NA	NA	NA	NA	CHD9	8333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	53125869	53126178	53125948	Y	NA	CHD9	NA	NA	NA	NA	CHD9	38924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	53128013	53128430	53128279	Y	RBL2	CHD9	NA	NA	NA	NA	CHD9	41068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	53134908	53135206	53135001	Y	NA	CHD9	NA	NA	NA	NA	CHD9	47963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	53165497	53165808	53165602	Y	NA	NA	NA	NA	NA	NA	CHD9	78552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	53517834	53518098	53518006	Y	NA	AKTIP	NA	NA	NA	NA	AKTIP	18225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	53865846	53866045	53865946	Y	NA	NA	NA	NA	NA	NA	FTO	129971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	53915459	53915524	53915492	Y	NA	NA	NA	NA	NA	NA	FTO	179584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr16	53946175	53946412	53946271	Y	RBL2,AKTIP	NA	NA	NA	NA	NA	FTO	210300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	54114585	54114959	54114772	Y	NA	NA	NA	NA	NA	NA	IRX3	203716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr16	54209640	54210024	54209757	Y	NA	NA	NA	NA	NA	NA	IRX3	108651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.606617656144789
chr16	55365064	55365162	55365113	Y	NA	NA	NA	NA	NA	NA	MMP2	56450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	55870128	55870546	55870373	Y	NA	CES1	NA	NA	NA	NA	CES1	4879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	56458239	56458402	56458321	Y	NA	AMFR,OGFOD1,NUDT21	NA	NA	NA	NA	AMFR	789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	56585977	56586211	56586034	Y	MT3,GNAO1,BBS2	BBS2	AMFR,NUDT21,MT1B,BBS2,MT2A,MT3,MT1A,MT1JP,MT1DP,MT1M,MT1H,MT1X,MT1IP,MT1G,NUP93	IMR90	Hi-C	24141950	BBS2	33782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	56640479	56640669	56640573	Y	NA	MT2A,MT1E,MT1A,MT1F	NA	NA	NA	NA	MT2A	368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	56641054	56641530	56641359	Y	MT2A,MT1E	MT2A,MT1E,MT1A,MT1F	NA	NA	NA	NA	MT2A	943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.293857975970463
chr16	56882732	56883304	56883026	Y	NA	NA	MIR138-2	IMR90	Hi-C	24141950	HERPUD1	80656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	57125471	57125887	57125617	Y	NA	CPNE2	NA	NA	NA	NA	CPNE2	1022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	57302834	57302977	57302910	Y	NA	ARL2BP,PLLP	NA	NA	NA	NA	PLLP	13622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	57338123	57338348	57338237	Y	NA	PLLP	NLRC5,CPNE2,PLLP,CIAPIN1,FAM192A,RSPRY1,ARL2BP,COQ9,CX3CL1,CCL22,POLR2C,GPR114,CCDC102A	IMR90	Hi-C	24141950	PLLP	21524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr16	57488914	57489209	57489062	Y	NA	COQ9,CIAPIN1,POLR2C,DOK4	NA	NA	NA	NA	POLR2C	5090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	57518028	57518100	57518073	Y	DOK4	COQ9,CIAPIN1,POLR2C,DOK4	NA	NA	NA	NA	DOK4	1139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr16	57541705	57541726	57541715	Y	NA	POLR2C,DOK4,CCDC102A	POLR2C,DOK4,COQ9,CIAPIN1	IMR90	Hi-C	24141950	DOK4	22466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	57564039	57564411	57564096	Y	ZNF319,GPR114	DOK4,CCDC102A	NA	NA	NA	NA	CCDC102A	4100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	57655846	57656393	57655974	Y	FAM192A,COQ9,CIAPIN1,GPR56	GPR56,GPR97	NA	NA	NA	NA	GPR56	13282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	57657206	57657412	57657318	Y	NA	GPR56,GPR97	NA	NA	NA	NA	GPR56	14642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr16	57670999	57671200	57671100	Y	GPR56,PLLP,CX3CL1,CCL17,GPR56	GPR56,GPR97	NA	NA	NA	NA	GPR56	28435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	57701111	57701632	57701437	Y	FAM192A,ZNF319,C16orf57,GPR97	GPR97,CCDC135	NA	NA	NA	NA	GPR97	1012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.647049602882229
chr16	57717053	57717380	57717096	Y	FAM192A,ZNF319,GPR97	GPR97,CCDC135	NA	NA	NA	NA	CCDC135	9325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	57841964	57842337	57842236	Y	NA	NA	NA	NA	NA	NA	KIFC3	52620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr16	57860886	57861304	57861251	Y	NA	KIFC3	CNGB1,KATNB1,KIFC3	IMR90	Hi-C	24141950	KIFC3	33653	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.47438634715978
chr16	57927623	57928192	57928041	Y	GPR97,ZNF319	KIFC3	NA	NA	NA	NA	KIFC3	32666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.43815842562598
chr16	58159860	58159971	58159905	Y	C16orf80	C16orf80	NA	NA	NA	NA	C16orf80	1383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	58160772	58161211	58161024	Y	C16orf80	C16orf80	NA	NA	NA	NA	C16orf80	143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	58493284	58493520	58493447	Y	NDRG4,NDRG4,NDRG4	NDRG4	NA	NA	NA	NA	NDRG4	1230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	58555953	58556233	58556187	Y	NA	SETD6	NA	NA	NA	NA	SETD6	8570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.278247355344137
chr16	60691914	60691948	60691931	Y	NA	NA	NA	NA	NA	NA	GOT2	1925653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	62021508	62021884	62021766	Y	NA	NA	NA	NA	NA	NA	GOT2	3255247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	64377838	64377886	64377853	Y	NA	NA	NA	NA	NA	NA	CDH5	2020647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	65378012	65378388	65378200	Y	NA	NA	NA	NA	NA	NA	CDH5	1020145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	66416918	66416958	66416940	Y	NA	CDH5,LINC00920,BEAN1	NA	NA	NA	NA	CDH5	18385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	66440915	66440994	66440955	Y	CMTM3,CMTM3	CDH5,LINC00920,BEAN1	NA	NA	NA	NA	LINC00920	488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	66587187	66587393	66587288	Y	NA	TK2,CKLF,CKLF-CMTM1,CMTM1,CMTM3	NA	NA	NA	NA	CKLF-CMTM1	2697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr16	66709355	66709374	66709366	Y	DYNC1LI2	CMTM4	NA	NA	NA	NA	CMTM4	19236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	66719308	66719396	66719350	Y	NA	CMTM4	NA	NA	NA	NA	CMTM4	9214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	66784501	66784840	66784671	Y	NA	DYNC1LI2	NA	NA	NA	NA	DYNC1LI2	800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr16	66906996	66907469	66907329	Y	SLC9A5,KIAA0895L,CMTM4,DYNC1LI2,CES4A,CES4A,CES3,CBFB,CA7,CA7,PDP2	NAE1,PDP2,CDH16	NA	NA	NA	NA	NAE1	1837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	66939054	66939376	66939271	Y	NA	NAE1,PDP2,CDH16,RRAD,FAM96B,CES2	NA	NA	NA	NA	CDH16	11511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr16	66939830	66939961	66939896	Y	NA	NAE1,PDP2,CDH16,RRAD,FAM96B,CES2	NA	NA	NA	NA	CDH16	10926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	66988106	66988414	66988274	Y	NA	CDH16,RRAD,FAM96B,CES2,CES3	NA	NA	NA	NA	CES3	4726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr16	67030331	67030579	67030487	Y	HSF4,CMTM4,DYNC1LI2,CA7,CES4A	CES3,CBFB	NA	NA	NA	NA	CBFB	30440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	67150652	67150777	67150712	Y	LRRC29,LRRC29,FHOD1,FAM65A,ATP6V0D1,C16orf70	C16orf70,B3GNT9,FBXL8,TRADD,HSF4	NA	NA	NA	NA	C16orf70	8791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	67538327	67538734	67538468	Y	NA	ATP6V0D1,FAM65A	AGRP,TSNAXIP1,GFOD2,RANBP10,PSKH1,CTCF,RLTPR,CTRL	IMR90	Hi-C	24141950	FAM65A	11587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	67561753	67561884	67561820	Y	HSF4,SLC9A5,TPPP3,FAM65A	ATP6V0D1,FAM65A,CTCF	NA	NA	NA	NA	FAM65A	11432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr16	67581625	67581971	67581838	Y	RLTPR,CTCF	FAM65A,CTCF	NA	NA	NA	NA	CTCF	12339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	67597304	67597932	67597899	Y	THAP11,RLTPR,ACD	FAM65A,CTCF	NA	NA	NA	NA	CTCF	2994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr16	67794099	67794447	67794264	Y	CTCF,GFOD2,DPEP2,RANBP10	GFOD2,RANBP10,TSNAXIP1	NA	NA	NA	NA	GFOD2	42775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	67867011	67867153	67867060	Y	TPPP3,CENPT	RANBP10,TSNAXIP1,THAP11,NUTF2,CENPT,EDC4,NRN1L	NA	NA	NA	NA	THAP11	7060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	67891676	67892114	67891889	Y	RLTPR,ACD,PSMB10,NFATC3,EDC4,THAP11	THAP11,NUTF2,CENPT,EDC4,NRN1L,PSKH1	NA	NA	NA	NA	CENPT	11962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	67892470	67892795	67892734	Y	RLTPR,ACD,NFATC3,EDC4,THAP11	THAP11,NUTF2,CENPT,EDC4,NRN1L,PSKH1	NA	NA	NA	NA	EDC4	12131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	68113537	68113949	68113713	Y	SLC7A6OS,RLTPR,RANBP10,PSMB10,DPEP2,NFATC3	NFATC3	NA	NA	NA	NA	NFATC3	2705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr16	68129095	68129275	68129185	Y	NA	NFATC3	NA	NA	NA	NA	NFATC3	12441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	68268995	68269119	68269015	Y	NA	ESRP2,PLA2G15,SLC7A6	NA	NA	NA	NA	ESRP2	886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr16	68271348	68271876	68271591	Y	TSNAXIP1,SLC12A4,ESRP2	ESRP2,PLA2G15,SLC7A6	NA	NA	NA	NA	ESRP2	1343	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19417299873375
chr16	68320188	68320357	68320233	Y	RANBP10,THAP11,EDC4,PSMB10,DPEP2,NFATC3,ZFP90,SLC7A6,SLC7A6OS,PRMT7	PLA2G15,SLC7A6,SLC7A6OS,PRMT7,RNU4-30P	NA	NA	NA	NA	SLC7A6OS	22492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	68320405	68320913	68320608	Y	ZFP90,SMPD3	PLA2G15,SLC7A6,SLC7A6OS,PRMT7,RNU4-30P	NA	NA	NA	NA	SLC7A6OS	21936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	68415381	68415552	68415488	Y	NA	NA	NA	NA	NA	NA	RNU4-30P	53949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr16	68778758	68779020	68778839	Y	NA	CDH1	NA	NA	NA	NA	CDH1	9630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr16	69060339	69060481	69060445	Y	NA	NA	NA	NA	NA	NA	HAS3	76986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr16	69106233	69106613	69106351	Y	NA	HAS3,CHTF8	NA	NA	NA	NA	HAS3	30854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	69121214	69121414	69121257	Y	NA	HAS3,CHTF8,CIRH1A	HAS3	IMR90	Hi-C	24141950	HAS3	16053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	69225511	69225823	69225667	Y	HAS3	SNTB2	NA	NA	NA	NA	SNTB2	6479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	69345968	69346332	69346034	Y	NA	VPS4A,PDF,NIP7,COG8,TMED6	NA	NA	NA	NA	VPS4A	2709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr16	69351854	69351929	69351891	Y	NA	VPS4A,PDF,NIP7,COG8,TMED6	NA	NA	NA	NA	VPS4A	8595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr16	69432325	69432475	69432421	Y	TERF2	TMED6,TERF2,CYB5B	NFAT5,MIR1538,VPS4A,COG8,TERF2,NOB1,CYB5B,NQO1,WWP2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	TERF2	7999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr16	69506405	69506529	69506498	Y	NA	CYB5B	NA	NA	NA	NA	CYB5B	49977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr16	69556739	69556897	69556827	Y	HAS3,TERF2	NFAT5	NFAT5,CYB5B,TERF2	IMR90	Hi-C	24141950	NFAT5	40100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	69563572	69563696	69563627	Y	NA	NFAT5	NFAT5,CYB5B,TERF2,MIR1538	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	NFAT5	33301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	69564577	69564882	69564731	Y	WWP2	NFAT5	NFAT5,CYB5B,TERF2,MIR1538	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	NFAT5	32115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	69601109	69601332	69601245	Y	WWP2	NFAT5	NA	NA	NA	NA	NFAT5	4112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	69603393	69603628	69603450	Y	NA	NFAT5	NA	NA	NA	NA	NFAT5	6396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	69751128	69751528	69751345	Y	PDF,TERF2,NQO1	NQO1,NOB1,WWP2	NA	NA	NA	NA	NQO1	7326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	69761641	69762033	69761837	Y	NA	NQO1,NOB1,WWP2	NA	NA	NA	NA	NQO1	2787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	69777344	69777472	69777408	Y	NA	NQO1,NOB1,WWP2	NA	NA	NA	NA	NOB1	9371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	69790083	69790481	69790284	Y	NA	NQO1,NOB1,WWP2	NA	NA	NA	NA	NOB1	3240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr16	69790577	69791500	69790768	Y	PDF,NIP7,NOB1	NQO1,NOB1,WWP2	NA	NA	NA	NA	WWP2	2709	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.30665997260724
chr16	69865358	69865753	69865556	Y	NA	NA	NA	NA	NA	NA	WWP2	71149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	70060239	70060493	70060397	Y	EXOSC6,WWP2	PDXDC2P	NA	NA	NA	NA	PDXDC2P	37355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	70356792	70356812	70356803	Y	NA	AARS,DDX19B,DDX19A	NA	NA	NA	NA	DDX19A	21920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	70444676	70444732	70444694	Y	NA	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	26408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	70451023	70451476	70451223	Y	NA	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	19664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr16	70461908	70462625	70462132	Y	ST3GAL2	ST3GAL2,FUK	NA	NA	NA	NA	ST3GAL2	8515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr16	70564094	70564236	70564165	Y	NA	COG4,SF3B3,SNORD111B	NA	NA	NA	NA	SNORD111B	2682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	70712649	70712861	70712739	Y	NA	MTSS1L	NA	NA	NA	NA	MTSS1L	5108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr16	70716686	70717066	70716876	Y	NA	MTSS1L	NA	NA	NA	NA	MTSS1L	903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	70759138	70759547	70759396	Y	MTSS1L	MTSS1L	MTSS1L,IL34	IMR90	Hi-C	24141950	MTSS1L	41169	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.23197691874868
chr16	70779915	70780216	70780046	Y	NA	NA	NA	NA	NA	NA	VAC14	52848	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03146247104665
chr16	70780634	70780961	70780786	Y	MTSS1L	NA	NA	NA	NA	NA	VAC14	52103	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.5968363587922
chr16	70783169	70783447	70783290	Y	NA	VAC14	NA	NA	NA	NA	VAC14	49617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	70980057	70980287	70980181	Y	NA	NA	NA	NA	NA	NA	VAC14	146993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	71734305	71734386	71734346	Y	PHLPP2	PHLPP2	NA	NA	NA	NA	PHLPP2	22218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	71753676	71753893	71753785	Y	HPR,PHLPP2	PHLPP2,SNORD71	NA	NA	NA	NA	PHLPP2	2711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	71828659	71828769	71828714	Y	NA	SNORD71,AP1G1,ATXN1L,IST1	NA	NA	NA	NA	AP1G1	12335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	71931018	71931097	71931057	Y	DHX38,ATXN1L,KIAA0174	ZNF821	NA	NA	NA	NA	ZNF821	3779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr16	72257967	72258413	72258290	Y	NA	PMFBP1	HPR	IMR90	Hi-C	24141950	PMFBP1	49190	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.60389881918156
chr16	72459158	72459630	72459377	Y	NA	NA	NA	NA	NA	NA	PMFBP1	250381	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.54703360882521
chr16	72460868	72461258	72460965	Y	NA	NA	NA	NA	NA	NA	PMFBP1	252091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	72671878	72672163	72672013	Y	NA	NA	NA	NA	NA	NA	ZFHX3	419434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr16	72897745	72898023	72897884	Y	NA	NA	NA	NA	NA	NA	ZFHX3	193574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	72912475	72912642	72912542	Y	NA	NA	NA	NA	NA	NA	ZFHX3	178955	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.2962361179219
chr16	72965555	72965897	72965813	Y	ZFHX3	NA	NA	NA	NA	NA	ZFHX3	125700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	72966138	72966319	72966212	Y	NA	NA	NA	NA	NA	NA	ZFHX3	125278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	72972740	72973001	72972925	Y	NA	NA	NA	NA	NA	NA	ZFHX3	118596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	73012151	73012443	73012287	Y	ZFHX3	NA	NA	NA	NA	NA	ZFHX3	79154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	73084736	73084892	73084798	Y	NA	ZFHX3	NA	NA	NA	NA	ZFHX3	6705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	73088640	73089206	73088991	Y	NA	ZFHX3	NA	NA	NA	NA	ZFHX3	2391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr16	73090044	73090191	73090091	Y	ZFHX3,ZFHX3	ZFHX3	NA	NA	NA	NA	ZFHX3	1406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.755192441722388
chr16	73102477	73102709	73102578	Y	ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	10880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	73102955	73103191	73103082	Y	ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	11358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	73104505	73104770	73104567	Y	ZFHX3,ZFHX3	ZFHX3	ZFHX3,HTA	IMR90	Hi-C	24141950	ZFHX3	12908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.990870426564445
chr16	74353064	74353398	74353241	Y	FA2H	PSMD7,RP11-252A24.2	NA	NA	NA	NA	PSMD7	24391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	74356396	74356719	74356558	Y	NA	PSMD7,RP11-252A24.2	NA	NA	NA	NA	PSMD7	27723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr16	74610751	74610842	74610827	Y	NA	GLG1	NA	NA	NA	NA	GLG1	28170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	74672577	74672957	74672890	Y	NA	GLG1,RFWD3	NA	NA	NA	NA	RFWD3	25822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	74701397	74701877	74701440	Y	RFWD3	RFWD3,MLKL	NA	NA	NA	NA	RFWD3	2618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.426159084066716
chr16	74702224	74702291	74702259	Y	NA	RFWD3,MLKL	NA	NA	NA	NA	RFWD3	3445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	74777612	74777799	74777727	Y	NA	MLKL	NA	NA	NA	NA	MLKL	44754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	74970861	74971182	74971035	Y	MLKL	NA	NA	NA	NA	NA	ZNRF1	59746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	74991657	74991945	74991906	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	ZNRF1	38983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	75031065	75031181	75031127	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	ZNRF1	137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	75034413	75034614	75034514	Y	FA2H,ZFP1,BCAR1,BCAR1,ZNRF1	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	2342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	75034712	75035106	75034867	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	2641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	75037611	75037819	75037667	Y	NA	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	5540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	75045854	75046060	75045918	Y	TMEM170A,MLKL	ZNRF1,WDR59	NA	NA	NA	NA	WDR59	13783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	75278988	75279894	75279594	Y	CHST6,FA2H,BCAR1,BCAR1,BCAR1,BCAR1,BCAR1	CTRB1,BCAR1	NA	NA	NA	NA	BCAR1	20057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr16	75283958	75284369	75284078	Y	NA	CTRB1,BCAR1	NA	NA	NA	NA	BCAR1	15582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	75286788	75287025	75286897	Y	NA	CTRB1,BCAR1	NA	NA	NA	NA	BCAR1	12926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	75294692	75295061	75294835	Y	TERF2IP,BCAR1,BCAR1	CTRB1,BCAR1	NA	NA	NA	NA	BCAR1	4890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	75359436	75359702	75359569	Y	NA	NA	BCAR1	IMR90	Hi-C	24141950	BCAR1	59485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	75411958	75412267	75412159	Y	NA	NA	NA	NA	NA	NA	CFDP1	53116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	75420812	75420988	75420900	Y	NA	CFDP1	CTRB1,BCAR1,CTRB2	IMR90	Hi-C	24141950	CFDP1	44395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	75454988	75455069	75455029	Y	NA	CFDP1,TMEM170A	NA	NA	NA	NA	CFDP1	10314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	75483148	75483204	75483176	Y	NA	CFDP1,TMEM170A,CHST6	NA	NA	NA	NA	TMEM170A	14191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	75598847	75599270	75599139	Y	TMEM170A	TMEM231,GABARAPL2	NA	NA	NA	NA	GABARAPL2	598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	75628076	75628219	75628207	Y	NA	TMEM231,GABARAPL2,ADAT1	NA	NA	NA	NA	ADAT1	26979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	75636745	75636762	75636754	Y	NA	TMEM231,GABARAPL2,ADAT1,TERF2IP,KARS	NA	NA	NA	NA	ADAT1	18436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr16	75716922	75717191	75717044	Y	CHST5,TERF2IP	TERF2IP,KARS	NA	NA	NA	NA	KARS	36381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	76269107	76269317	76269211	Y	NA	RPL18P13,CNTNAP4	NA	NA	NA	NA	RPL18P13	1586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	78090271	78090541	78090406	Y	NA	WWOX	NA	NA	NA	NA	WWOX	40769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	78325751	78325980	78325865	Y	NA	NA	NA	NA	NA	NA	WWOX	194441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	78498317	78498699	78498508	Y	NA	NA	NA	NA	NA	NA	WWOX	367007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	78565966	78565983	78565974	Y	NA	NA	NA	NA	NA	NA	WWOX	434656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	78830248	78830546	78830432	Y	NA	NA	NA	NA	NA	NA	WWOX	698938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr16	78832287	78832508	78832373	Y	NA	NA	NA	NA	NA	NA	WWOX	700977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	78908280	78908607	78908407	Y	NA	NA	NA	NA	NA	NA	MAF	724004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.160242598709354
chr16	79414931	79415415	79415101	Y	MAF	NA	WWOX	IMR90	Hi-C	24141950	MAF	217196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	79635433	79635866	79635594	Y	MAF	MAF	NA	NA	NA	NA	MAF	2822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	79692252	79692530	79692298	Y	NA	NA	WWOX	IMR90	Hi-C	24141950	MAF	59641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	80060890	80061347	80061153	Y	NA	NA	NA	NA	NA	NA	MAF	428279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	80208286	80208441	80208438	Y	NA	NA	NA	NA	NA	NA	MAF	575675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	80697320	80697330	80697325	Y	NA	NA	NA	NA	NA	NA	CDYL2	138896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	80838768	80839127	80839024	Y	CENPN,C16orf61,ATMIN,CDYL2	CDYL2	NA	NA	NA	NA	CDYL2	2542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	80965900	80966145	80965922	Y	NA	NA	CMC2	IMR90	Hi-C	24141950	CENPN	71958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	81038389	81038511	81038494	Y	NA	CENPN,ATMIN	NA	NA	NA	NA	CENPN	286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	81439497	81439896	81439576	Y	NA	CMIP	NA	NA	NA	NA	CMIP	36879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	81465654	81465943	81465745	Y	PLCG2,CMIP	CMIP	NA	NA	NA	NA	CMIP	10832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr16	81491583	81491773	81491678	Y	NA	CMIP	NA	NA	NA	NA	CMIP	14808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	81512608	81512902	81512703	Y	PLCG2,CMIP,CMIP	CMIP	NA	NA	NA	NA	CMIP	35833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	81514966	81515415	81515191	Y	NA	CMIP	NA	NA	NA	NA	CMIP	38191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	81554788	81555293	81554938	Y	CMIP	NA	NA	NA	NA	NA	CMIP	78013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	81557764	81558419	81558110	Y	CMIP	NA	NA	NA	NA	NA	CMIP	80989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	81560583	81561027	81560837	Y	PLCG2,CMIP,CMIP	NA	NA	NA	NA	NA	CMIP	83808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	81592572	81592719	81592646	Y	GAN,CMIP	NA	NA	NA	NA	NA	CMIP	115797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	81617620	81618040	81617835	Y	NA	NA	NA	NA	NA	NA	CMIP	140845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	81649296	81649780	81649593	Y	NA	NA	NA	NA	NA	NA	CMIP	172521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	81659418	81659741	81659491	Y	PLCG2,CMIP	NA	NA	NA	NA	NA	CMIP	182643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	81659842	81660553	81660320	Y	NA	NA	NA	NA	NA	NA	CMIP	183067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	81701284	81701528	81701406	Y	NA	NA	NA	NA	NA	NA	CMIP	224509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	81732062	81732263	81732080	Y	NA	NA	NA	NA	NA	NA	CMIP	255287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	81763852	81764387	81764185	Y	NA	NA	NA	NA	NA	NA	SDR42E1	278706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	81875278	81875726	81875461	Y	PLCG2	NA	NA	NA	NA	NA	SDR42E1	167367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	82069809	82069958	82069924	Y	HSD17B2	SDR42E1,HSD17B2	NA	NA	NA	NA	HSD17B2	3200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	82071348	82071461	82071424	Y	HSD17B2	SDR42E1,HSD17B2	NA	NA	NA	NA	HSD17B2	4739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr16	82168947	82168959	82168953	Y	NA	MPHOSPH6	NA	NA	NA	NA	MPHOSPH6	32872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	82172740	82172851	82172799	Y	SDR42E1	MPHOSPH6	NA	NA	NA	NA	MPHOSPH6	28980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	82687139	82687406	82687299	Y	NA	NA	HSBP1	IMR90	Hi-C	24141950	MPHOSPH6	485308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	83953538	83953937	83953606	Y	NA	MLYCD,OSGIN1	NA	NA	NA	NA	MLYCD	22807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	83964806	83964956	83964869	Y	NA	MLYCD,OSGIN1	NA	NA	NA	NA	OSGIN1	14931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	83988181	83988500	83988282	Y	NA	OSGIN1	NA	NA	NA	NA	OSGIN1	8294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	84172759	84173286	84173220	Y	NA	MBTPS1,HSDL1,DNAAF1,TAF1C	MBTPS1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	HSDL1	3511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	84177434	84177775	84177582	Y	NA	MBTPS1,HSDL1,DNAAF1,TAF1C	NA	NA	NA	NA	DNAAF1	569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	84208911	84209121	84208992	Y	OSGIN1,COTL1,HSDL1,TAF1C	HSDL1,DNAAF1,TAF1C	NA	NA	NA	NA	TAF1C	9548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	84548498	84548894	84548797	Y	COTL1	NA	NA	NA	NA	NA	COTL1	100789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.332153010550462
chr16	84560453	84560734	84560479	Y	NA	NA	KIAA1609,COTL1,USP10	IMR90	Hi-C	24141950	COTL1	88949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	84633108	84633501	84633306	Y	ZDHHC7,KIAA0513,CRISPLD2,COTL1	COTL1,KLHL36	NA	NA	NA	NA	COTL1	16182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr16	84633541	84633938	84633771	Y	NA	COTL1,KLHL36	NA	NA	NA	NA	COTL1	15745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	84676809	84677221	84677048	Y	KIAA1609	COTL1,KLHL36	KIAA1609,COTL1,USP10,KLHL36,ZDHHC7	IMR90	Hi-C	24141950	KLHL36	2910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	84677292	84677600	84677448	Y	NA	COTL1,KLHL36	KIAA1609,COTL1,USP10,KLHL36,ZDHHC7	IMR90	Hi-C	24141950	KLHL36	2531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	84682643	84682972	84682859	Y	NA	COTL1,KLHL36,USP10	NA	NA	NA	NA	KLHL36	2512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr16	84704578	84704887	84704734	Y	NA	KLHL36,USP10	NA	NA	NA	NA	KLHL36	24447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	84726179	84726324	84726251	Y	KIAA0513,COTL1	KLHL36,USP10	USP10,KIAA1609,COTL1,KLHL36,CRISPLD2,ZDHHC7	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP10	5260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	84784930	84785133	84785062	Y	KIAA0513,COTL1	NA	CRISPLD2,ZDHHC7	IMR90	Hi-C	24141950	USP10	53346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	84788106	84788226	84788167	Y	COTL1	NA	NA	NA	NA	NA	USP10	56522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	85028506	85028759	85028547	Y	COTL1,CRISPLD2,ZDHHC7,KIAA0513	ZDHHC7,KIAA0513	NA	NA	NA	NA	ZDHHC7	14382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	85037797	85037883	85037799	Y	NA	ZDHHC7,KIAA0513	NA	NA	NA	NA	ZDHHC7	5258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85038009	85038299	85038256	Y	NA	ZDHHC7,KIAA0513	NA	NA	NA	NA	ZDHHC7	4842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85080631	85081139	85080973	Y	KIAA0513	ZDHHC7,KIAA0513	NA	NA	NA	NA	KIAA0513	21256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85185210	85185759	85185517	Y	NA	NA	NA	NA	NA	NA	KIAA0513	125835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr16	85187292	85187617	85187455	Y	NA	NA	NA	NA	NA	NA	KIAA0513	127917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85202555	85203049	85202710	Y	NA	NA	NA	NA	NA	NA	KIAA0513	143180	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.56954659209613
chr16	85339922	85340091	85340012	Y	NA	NA	NA	NA	NA	NA	KIAA0513	280547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr16	85343472	85343805	85343554	Y	KIAA0513	NA	KIAA0513,FAM92B,LOC400548,LINC00311,LOC727710,KIAA0182,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KIAA0513	284097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85343960	85344187	85344115	Y	NA	NA	KIAA0513,FAM92B,LOC400548,LINC00311,LOC727710,KIAA0182,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KIAA0513	284585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85346294	85346686	85346622	Y	FAM92B	NA	KIAA0513,FAM92B,LOC400548,LINC00311,LOC727710,KIAA0182,GINS2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	KIAA0513	286919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr16	85355565	85356105	85355766	Y	NA	NA	FAM92B,LOC727710,GINS2,KIAA0182,KIAA0513,LINC00311	IMR90	Hi-C	24141950	KIAA0513	296190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85415557	85415973	85415759	Y	NA	NA	LOC727710,LINC00311,KIAA0182,GINS2	IMR90	Hi-C	24141950	GINS2	305706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	85418434	85418651	85418593	Y	NA	NA	LOC727710,LINC00311,KIAA0182,GINS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	303028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	85424430	85424739	85424585	Y	NA	NA	LOC727710,LINC00311,GINS2,KIAA0182,FAM92B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	296940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85450092	85450367	85450166	Y	NA	NA	LOC727710,GINS2,KIAA0182,FAM92B,LOC400548,C16orf74	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	271312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85456219	85456617	85456516	Y	FAM92B	NA	KIAA0182,LOC400548,LOC727710,C16orf74	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	265062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr16	85496879	85497321	85497140	Y	FAM92B,KIAA0182	NA	KIAA0182,LOC727710,C16orf74,LINC00311,ZDHHC7,LOC400548	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	224358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	85497347	85497685	85497518	Y	KIAA0182,GINS2	NA	KIAA0182,LOC727710,C16orf74,LINC00311,ZDHHC7,LOC400548	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GINS2	223994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	85548685	85548970	85548791	Y	NA	NA	KIAA0182	IMR90	Hi-C	24141950	GINS2	172709	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.28670521694759
chr16	85557334	85557622	85557547	Y	NA	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	164057	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.14552442018686
chr16	85558121	85558453	85558347	Y	KIAA0182,KIAA0182	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	163226	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.06565460038731
chr16	85558951	85559083	85559056	Y	KIAA0513,IRF8	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	162596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr16	85569070	85569366	85569223	Y	KIAA0182,KIAA0182,GINS2,COX4NB	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	152313	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.89174687461125
chr16	85569816	85569916	85569832	Y	NA	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	151763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.204125726769093
chr16	85570517	85570742	85570617	Y	NA	NA	KIAA0182,LOC727710	IMR90	Hi-C	24141950	GINS2	150937	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.26985063787485
chr16	85586399	85586765	85586561	Y	KIAA0182,KIAA0182,GINS2	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr16	85586938	85587370	85587020	Y	NA	NA	LINC00311,LOC400548,KIAA0182,FAM92B,LOC727710,C16orf74,KIAA0513,GINS2,COX4NB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GINS2	134309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.734975956746469
chr16	85600571	85600865	85600718	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	120814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	85603902	85604423	85603949	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	117256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	85604470	85605423	85604746	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	116256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85606114	85606473	85606294	Y	NA	NA	LINC00311,FAM92B	IMR90	Hi-C	24141950	GINS2	115206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr16	85623714	85624085	85623926	Y	NA	NA	LOC727710,LOC400548,LINC00311,KIAA0182,C16orf74	IMR90	Hi-C	24141950	GINS2	97594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85648720	85648939	85648787	Y	NA	NA	NA	NA	NA	NA	GINS2	72740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr16	85678973	85679150	85679027	Y	NA	GINS2	GINS2	IMR90	Hi-C	24141950	GINS2	42529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	85878522	85878578	85878550	Y	NA	COX4I1,RP11-568J23.1	LOC400550,COX4NB,IRF8,FLJ30679,MTHFSD,LOC146513,LOC732275,FOXF1,COX4I1	IMR90	Hi-C	24141950	RP11-568J23.1	30380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	85922437	85922658	85922589	Y	COX4I1,IRF8	NA	COX4NB,COX4I1,LOC400550,MTHFSD	IMR90	Hi-C	24141950	RP11-568J23.1	74295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	85950196	85950424	85950316	Y	COX4I1,IRF8	NA	NA	NA	NA	NA	RP11-568J23.1	102054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	86587305	86587716	86587504	Y	NA	FOXF1,MTHFSD	NA	NA	NA	NA	MTHFSD	464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr16	86698129	86698417	86698281	Y	NA	NA	FOXL1,FLJ30679,MTHFSD,FOXC2,C16orf95,FBXO31	IMR90	Hi-C	24141950	MTHFSD	111288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	86698644	86698785	86698699	Y	FOXL1	NA	FOXL1,C16orf95,MTHFSD,FLJ30679,FOXC2	IMR90	Hi-C	24141950	MTHFSD	111803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	86775121	86775409	86775225	Y	NA	NA	FOXC2,FOXL1	IMR90	Hi-C	24141950	MTHFSD	188280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	87378207	87378359	87378234	Y	FBXO31	C16orf95,MAP1LC3B,FBXO31	NA	NA	NA	NA	C16orf95	29185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	87421939	87422407	87422148	Y	NA	MAP1LC3B,FBXO31	NA	NA	NA	NA	FBXO31	1341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr16	87498995	87499259	87499135	Y	BANP,BANP,MAP1LC3B,ZCCHC14	NA	NA	NA	NA	NA	FBXO31	75247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr16	87607297	87607309	87607303	Y	NA	NA	MAP1LC3B,FBXO31,ZCCHC14,KLHDC4,JPH3,CA5A	IMR90	Hi-C	24141950	FBXO31	183549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	87811524	87811882	87811665	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	13926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr16	87812654	87813065	87812978	Y	NA	KLHDC4	ZCCHC14,JPH3,KLHDC4,CA5A,SLC7A5,BANP,ZFPM1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	15056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320484685811508
chr16	87823236	87823449	87823367	Y	FBXO31,CA5A	KLHDC4	JPH3,KLHDC4,ZCCHC14,SLC7A5,CA5A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLHDC4	25638	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.43577111709026
chr16	87839693	87840050	87839856	Y	SLC7A5	KLHDC4	SLC7A5	MCF7	ChIA-PET	22265404	KLHDC4	42095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	87840547	87840941	87840913	Y	SLC7A5	KLHDC4	SLC7A5	MCF7	ChIA-PET	22265404	KLHDC4	42949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr16	87843209	87843416	87843290	Y	NA	KLHDC4	NA	NA	NA	NA	KLHDC4	45611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr16	87875229	87875683	87875262	Y	CA5A	SLC7A5	NA	NA	NA	NA	SLC7A5	25411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	87886258	87886670	87886593	Y	MAP1LC3B,ZCCHC14,BANP,BANP,BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	14424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	87888208	87888468	87888297	Y	KLHDC4,BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	12626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	87889826	87890140	87890011	Y	MAP1LC3B,ZCCHC14,BANP,BANP,BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	10954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.541044187806711
chr16	87892287	87892434	87892361	Y	FBXO31	SLC7A5	NA	NA	NA	NA	SLC7A5	8660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.417942452257261
chr16	87899593	87899990	87899750	Y	BANP	SLC7A5	NA	NA	NA	NA	SLC7A5	1104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	87904170	87904524	87904347	Y	FBXO31	SLC7A5	NA	NA	NA	NA	SLC7A5	3076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr16	87931288	87931492	87931437	Y	KLHDC4,BANP	SLC7A5,BANP	NA	NA	NA	NA	SLC7A5	30194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	87957908	87958324	87958193	Y	NA	BANP	NA	NA	NA	NA	BANP	22526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr16	87958916	87959287	87959164	Y	NA	BANP	NA	NA	NA	NA	BANP	21563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	87981759	87982021	87981940	Y	ZCCHC14,BANP,BANP,BANP	BANP	CA5A	K562	ChIA-PET	22265404	BANP	909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.438981068618564
chr16	88063556	88063600	88063578	Y	BANP,BANP,BANP	NA	NA	NA	NA	NA	BANP	82706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	88266286	88266434	88266360	Y	NA	NA	BANP	IMR90	Hi-C	24141950	ZFPM1	251291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr16	88275964	88276225	88276145	Y	NA	NA	BANP	IMR90	Hi-C	24141950	ZFPM1	241500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr16	88520905	88521327	88521137	Y	ZC3H18,SNAI3,RNF166,RNF166,RNF166,ZFPM1	ZFPM1	NA	NA	NA	NA	ZFPM1	3180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	88575081	88575169	88575126	Y	NA	NA	NA	NA	NA	NA	ZFPM1	57356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr16	88683643	88683946	88683795	Y	NA	ZC3H18,CYBA,MVD	NA	NA	NA	NA	CYBA	31614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	88837093	88837695	88837443	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	11924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	88839973	88840262	88840126	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	9357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	88847421	88847701	88847601	Y	CYBA,SNAI3,RNF166,RNF166	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	1918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr16	88857121	88857244	88857196	Y	NA	PIEZO1,CDT1,APRT	NA	NA	NA	NA	PIEZO1	7502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	89101477	89101571	89101537	Y	NA	NA	ACSF3,CBFA2T3,LOC400558,LINC00304,CDH15	IMR90	Hi-C	24141950	ACSF3	51212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	89241276	89241597	89241419	Y	NA	CDH15,ZNF778	NA	NA	NA	NA	CDH15	5101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	89268043	89268411	89268231	Y	NA	CDH15,ZNF778	NA	NA	NA	NA	ZNF778	13707	CAGE	HepG2 ENCODE	hg19	FANTOM5	65.700408797189
chr16	89313669	89314138	89313993	Y	ZNF276,ZNF778	ZNF778	NA	NA	NA	NA	ZNF778	31551	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.6698741266656
chr16	89323118	89323579	89323381	Y	NA	ZNF778	NA	NA	NA	NA	ZNF778	41000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr16	89380978	89381130	89380989	Y	ZNF276,ZNF276,SPATA2L,ANKRD11,ZNF778	NA	NA	NA	NA	NA	ZNF778	98860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	89392350	89392997	89392648	Y	NA	NA	NA	NA	NA	NA	ZNF778	110232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	89423849	89423969	89423923	Y	CBFA2T3,ZNF276,SPATA2L,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	131000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	89451016	89451317	89451295	Y	CBFA2T3,ACSF3,ZNF778,ZNF276,ZNF276,TCF25,SPG7,SPATA2L,ANKRD11	NA	NA	NA	NA	NA	ANKRD11	103652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr16	89555521	89555997	89555713	Y	ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,C16orf7,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.288600899311034
chr16	89557852	89558189	89558050	Y	NA	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	2527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr16	89564919	89565211	89565067	Y	NA	ANKRD11,SPG7	ANKRD11,SPG7	IMR90	Hi-C	24141950	SPG7	9594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr16	89571786	89572109	89572034	Y	ACSF3,ZNF276,ZNF276,TCF25,SPATA2L,CHMP1A,ANKRD11	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	16461	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19581879632612
chr16	89573610	89573931	89573734	Y	NA	ANKRD11,SPG7	NA	NA	NA	NA	SPG7	18285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr16	89579992	89580270	89580045	Y	ACSF3,ZNF778,DBNDD1,ZNF276,SPG7	ANKRD11,SPG7,RPL13,SNORD68	NA	NA	NA	NA	SPG7	24667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr16	89683162	89683271	89683207	Y	DPEP1,C16orf55	DPEP1,CHMP1A	NA	NA	NA	NA	DPEP1	5446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	89879863	89880236	89880053	Y	NA	FANCA,SPIRE2	NA	NA	NA	NA	FANCA	829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr16	89893816	89894170	89893993	Y	SPIRE2	FANCA,SPIRE2,TCF25	NA	NA	NA	NA	SPIRE2	11229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr16	89904172	89904600	89904272	Y	MC1R,SPIRE2	FANCA,SPIRE2,TCF25	NA	NA	NA	NA	SPIRE2	21585	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.2035438019633
chr16	89992380	89992810	89992683	Y	NA	MC1R,AC092143.1,TUBB3,DEF8,CENPBD1,AFG3L1P	NA	NA	NA	NA	TUBB3	6580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr16	90024486	90024764	90024610	Y	NA	MC1R,AC092143.1,TUBB3,DEF8,CENPBD1,AFG3L1P	NA	NA	NA	NA	DEF8	12153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr16	90087429	90087721	90087595	Y	TUBB3,DBNDD1,PRDM7	GAS8,DBNDD1	NA	NA	NA	NA	DBNDD1	2893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.31358232316691
chr16	90088262	90088277	90088270	Y	PRDM7	GAS8,DBNDD1	NA	NA	NA	NA	DBNDD1	3726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	234794	234851	234823	Y	DOC2B	RPH3AL,C17orf97	RPH3AL,DOC2B	IMR90	Hi-C	24141950	RPH3AL	749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr17	473610	473838	473725	Y	FAM101B	NA	NA	NA	NA	NA	RPS4XP17	84949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	597415	597783	597745	Y	NA	RPS4XP17,VPS53,FAM57A	NA	NA	NA	NA	VPS53	25174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	654300	654699	654470	Y	NA	VPS53,FAM57A,DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	DBIL5P	400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	693293	693510	693390	Y	RNMTL1	DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	GLOD4	9712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	698193	698349	698271	Y	NA	DBIL5P,GEMIN4,RNMTL1,GLOD4	NA	NA	NA	NA	GLOD4	14612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	881410	881576	881449	Y	NA	NXN,TIMM22	NA	NA	NA	NA	NXN	400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	881812	881896	881869	Y	NA	NXN,TIMM22	NA	NA	NA	NA	NXN	802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	942821	943085	942871	Y	MYO1C	TIMM22	NA	NA	NA	NA	TIMM22	44464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	1014015	1014933	1014151	Y	PITPNA,CRK,ABR	NA	NA	NA	NA	NA	TIMM22	115658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr17	1171565	1171808	1171610	Y	WDR81,PITPNA,ABR,ABR	NA	NA	NA	NA	NA	YWHAE	129864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr17	1254718	1255084	1255034	Y	NA	YWHAE	NA	NA	NA	NA	YWHAE	46588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	1391218	1391783	1391434	Y	NA	CRK,MYO1C,INPP5K,PITPNA-AS1	NA	NA	NA	NA	MYO1C	2323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr17	1620806	1621089	1620895	Y	PITPNA,SLC43A2,SCARF1,OVCA2,WDR81,WDR81,WDR81	PRPF8,TLCD2,WDR81,MIR22HG,SERPINF2,SERPINF1	NA	NA	NA	NA	MIR22HG	2338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	1666519	1666783	1666685	Y	RTN4RL1,WDR81,WDR81,SERPINF1	WDR81,MIR22HG,SERPINF2,SERPINF1	NA	NA	NA	NA	SERPINF1	3266	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05595226873025
chr17	1667462	1668045	1667797	Y	PITPNA,SLC43A2,WDR81,WDR81	WDR81,MIR22HG,SERPINF2,SERPINF1	NA	NA	NA	NA	SERPINF1	4209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	1953067	1954207	1953327	Y	TSR1,SMG6,SMG6,SGSM2,SGSM2,PITPNA,SLC43A2,RTN4RL1	RTN4RL1,DPH1,OVCA2,HIC1	NA	NA	NA	NA	HIC1	1241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	1994416	1994643	1994603	Y	HIC1,HIC1	HIC1	NA	NA	NA	NA	HIC1	38968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	2040718	2040966	2040824	Y	PAFAH1B1,SCARF1,WDR81	NA	NA	NA	NA	NA	HIC1	85270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	2078039	2078451	2078156	Y	TSR1,HIC1,HIC1	NA	NA	NA	NA	NA	HIC1	122591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	2087949	2088276	2088112	Y	NA	NA	NA	NA	NA	NA	SRR	116401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	2126107	2126815	2126522	Y	NA	NA	NA	NA	NA	NA	SRR	77862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	2241529	2241816	2241651	Y	NA	SRR,SMG6,SGSM2,TSR1	NA	NA	NA	NA	TSR1	2728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	2300026	2300553	2300288	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	1859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.355820165241481
chr17	2302108	2302510	2302261	Y	RAP1GAP2,PAFAH1B1,MNT	NA	NA	NA	NA	NA	MNT	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.321798954976365
chr17	2302778	2303366	2303033	Y	SMG6,SMG6,RAP1GAP2,PAFAH1B1,METTL16,SGSM2,SGSM2,MNT	MNT	NA	NA	NA	NA	MNT	366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.515731235523324
chr17	2305266	2305571	2305415	Y	RAP1GAP2,PAFAH1B1,MNT	MNT	NA	NA	NA	NA	MNT	2854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr17	2409124	2409453	2409310	Y	NA	METTL16	NA	NA	NA	NA	METTL16	3732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	2610688	2611037	2610862	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	116184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	2614073	2614260	2614119	Y	KIAA0664	NA	NA	NA	NA	NA	PAFAH1B1	119569	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.28423677636264
chr17	2652547	2653322	2653300	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	158043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	2795960	2796135	2796054	Y	NA	NA	NA	NA	NA	NA	PAFAH1B1	301456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	2863545	2863659	2863602	Y	OR3A2,OR1G1	NA	NA	NA	NA	NA	PAFAH1B1	369041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	2952123	2952503	2952284	Y	ASPA,ASPA,PAFAH1B1	NA	NA	NA	NA	NA	PAFAH1B1	457619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr17	3653999	3654456	3654363	Y	OR3A2,OR1E2,ATP2A3	GSG2,ITGAE	NA	NA	NA	NA	GSG2	28788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	3698279	3698691	3698534	Y	ZZEF1,ATP2A3	ITGAE,C17orf85	NA	NA	NA	NA	ITGAE	3846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	3706173	3706587	3706405	Y	NA	ITGAE,C17orf85	NA	NA	NA	NA	ITGAE	3636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.774093634319052
chr17	4107837	4108131	4108049	Y	NA	NA	NA	NA	NA	NA	ANKFY1	57143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	4118580	4118797	4118689	Y	NA	ANKFY1	NA	NA	NA	NA	ANKFY1	46477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	4125491	4125809	4125534	Y	NA	ANKFY1	NA	NA	NA	NA	ANKFY1	39465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	4204226	4204625	4204419	Y	CAMKK1	ANKFY1	NA	NA	NA	NA	ANKFY1	38952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	4205148	4205753	4205440	Y	P2RX1,ATP2A3,ZZEF1,ZMYND15,ZMYND15,SMTNL2,SMTNL2,ARRB2,UBE2G1	ANKFY1	NA	NA	NA	NA	ANKFY1	39874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	4244674	4245003	4244975	Y	NA	UBE2G1	NA	NA	NA	NA	UBE2G1	22920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	4340340	4340644	4340492	Y	NA	NA	NA	NA	NA	NA	UBE2G1	72417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	4615866	4616105	4615999	Y	MINK1,C17orf107,ARRB2,ZMYND15,ZMYND15,CXCL16	PELP1,RP11-314A20.1,ARRB2,MED11,CXCL16	NA	NA	NA	NA	ARRB2	4082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	4663304	4663479	4663372	Y	ZNF232,C17orf87,ARRB2,CXCL16,ZMYND15,ZMYND15	MED11,CXCL16,TM4SF5,GLTPD2,PSMB6,PLD2	NA	NA	NA	NA	TM4SF5	9700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr17	4737531	4737755	4737558	Y	PLD2,MINK1	GLTPD2,PSMB6,PLD2,MINK1	NA	NA	NA	NA	MINK1	2848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr17	4753672	4753828	4753714	Y	UBE2G1,ARRB2,CXCL16,ZMYND15,ZMYND15,MINK1,RNF167,C17orf107	PLD2,MINK1	NA	NA	NA	NA	MINK1	18989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	4811647	4812042	4811731	Y	NA	RNF167,SLC25A11,ENO3,PFN1	NA	NA	NA	NA	RNF167	29261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.920199979311699
chr17	4812526	4812616	4812571	Y	SMTNL2,ZNF232,KIF1C	RNF167,SLC25A11,ENO3,PFN1	NA	NA	NA	NA	RNF167	28687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr17	4839784	4839936	4839857	Y	C17orf107	RNF167,SLC25A11,ENO3,PFN1,SPAG7,CAMTA2	NA	NA	NA	NA	RNF167	1367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	6542489	6542952	6542608	Y	NA	TXNDC17,KIAA0753,MED31,C17orf100	NA	NA	NA	NA	KIAA0753	242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	6614362	6614643	6614518	Y	SLC16A13,SLC16A11,ASGR2,ASGR2,ASGR1,SLC13A5	SLC13A5,XAF1	MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100	IMR90	Hi-C	24141950	SLC13A5	243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.238638051599282
chr17	6655808	6656203	6655969	Y	RNASEK,GABARAP,XAF1	SLC13A5,XAF1	XAF1,MIR4520A,ALOX15P1,MIR4520B,MED31,C17orf100,FBXO39,TEKT1	IMR90	Hi-C	24141950	XAF1	563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr17	6656419	6656747	6656461	Y	RNASEK,GABARAP,XAF1	SLC13A5,XAF1	NA	NA	NA	NA	XAF1	19	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	6814987	6815378	6815170	Y	DLG4	NA	NA	NA	NA	NA	ALOX12P2	59807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	6818045	6818590	6818345	Y	NA	NA	NA	NA	NA	NA	ALOX12P2	62865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	6821400	6821836	6821600	Y	NA	NA	NA	NA	NA	NA	ALOX12P2	66220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	6897797	6898308	6898020	Y	NA	AC027763.2,RNASEK,C17orf49,SLC16A13	NA	NA	NA	NA	AC027763.2	15360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	6925152	6925653	6925481	Y	PLSCR3,C17orf49,BCL6B	AC027763.2,RNASEK,C17orf49,SLC16A13	NA	NA	NA	NA	C17orf49	9338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr17	6950063	6950446	6950332	Y	ZBTB4,ZBTB4,POLR2A,MED31,ACAP1	AC027763.2,RNASEK,C17orf49,SLC16A13	NA	NA	NA	NA	SLC16A13	12669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr17	6962166	6962433	6962299	Y	BCL6B	AC027763.2,RNASEK,C17orf49,SLC16A13	NA	NA	NA	NA	SLC16A13	24772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	7015601	7015870	7015677	Y	TNFSF12,POLR2A,CD68,CD68,SLC13A5,XAF1,RNASEK,GABARAP,EIF5A,ASGR1,ASGR2,ASGR2	ASGR2	NA	NA	NA	NA	ASGR2	1149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.683538742125097
chr17	7233457	7233867	7233744	Y	WRAP53,POLR2A,DNAH2,DLG4,EIF5A	YBX2,EIF5A,GPS2,NEURL4,KCTD11,TNK1	NA	NA	NA	NA	NEURL4	2745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	7381310	7382154	7381844	Y	KCTD11,TNK1,SOX15,KDM6B,ZBTB4,ZBTB4	TMEM102,CHRNB1,ZBTB4,POLR2A	NA	NA	NA	NA	ZBTB4	3428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	7389589	7389989	7389739	Y	C17orf49,GPS2,ACAP1,WRAP53,KDM6B,CHD3,AMAC1L3,ZBTB4,POLR2A	CHRNB1,ZBTB4,POLR2A	NA	NA	NA	NA	POLR2A	3904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	7456067	7456382	7456285	Y	ACAP1,WRAP53,CD68,CD68,TNFSF12	TNFSF12,TNFSF12-TNFSF13,SENP3,EIF4A1,SNORD10,CD68,MPDU1,AC113189.5	NA	NA	NA	NA	TNFSF12-TNFSF13	5651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	7737438	7738736	7737971	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,KDM6B	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	2486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	7738822	7740614	7739046	Y	ACAP1,ZBTB4,POLR2A,TNFSF12,CD68,CD68,SAT2,WRAP53,WRAP53,VAMP2,PER1,CTC1,C17orf59,KDM6B	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.834570635349663
chr17	7745337	7745870	7745591	Y	NA	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	4115	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.58056319291805
chr17	7745915	7746944	7746139	Y	NA	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	4693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.334289922707903
chr17	7746991	7747556	7747325	Y	POLR2A,EIF4A1,CD68,CD68,SAT2,WRAP53,PER1,KDM6B	KDM6B,CYB5D1,CHD3,LSMD1	NA	NA	NA	NA	KDM6B	5769	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.85526957991357
chr17	7790181	7790340	7790322	Y	POLR2A,WRAP53,PER1,CTC1,KDM6B,CHD3,CHD3	KDM6B,CYB5D1,CHD3,LSMD1,CNTROB,TRAPPC1	NA	NA	NA	NA	LSMD1	3625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	8029074	8029494	8029268	Y	NA	HES7,PER1,VAMP2,SNORD118,TMEM107	NA	NA	NA	NA	HES7	3664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	8056609	8057167	8057155	Y	NA	HES7,PER1,VAMP2,SNORD118,TMEM107,C17orf59	NA	NA	NA	NA	PER1	657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	8057335	8058055	8057702	Y	KDM6B,NDEL1,CTC1,PER1,VAMP2,C17orf59	HES7,VAMP2,SNORD118,TMEM107,C17orf59	NA	NA	NA	NA	PER1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	8090038	8090540	8090163	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	1024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	8095551	8095762	8095658	Y	KDM6B,KCNAB3,CTC1,VAMP2	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB	NA	NA	NA	NA	C17orf59	3987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.335604191872761
chr17	8103328	8103700	8103595	Y	NA	PER1,VAMP2,SNORD118,TMEM107,C17orf59,AURKB,PFAS,CTC1	NA	NA	NA	NA	AURKB	8218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.299777597877715
chr17	8268468	8268891	8268818	Y	SPDYE4,MFSD6L,CCDC42,CNTROB,ODF4	KRBA2,RPL26,NDEL1	NA	NA	NA	NA	KRBA2	9138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	8407322	8407642	8407416	Y	NA	NA	NA	NA	NA	NA	NDEL1	92873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	8436852	8437236	8437053	Y	MYH10	NA	NA	NA	NA	NA	MYH10	94843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	8532647	8532776	8532657	Y	KRBA2	MYH10	NA	NA	NA	NA	MYH10	568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	8600572	8600969	8600801	Y	MYH10	NA	MYH10,RPL26,RNF222	IMR90	Hi-C	24141950	MYH10	68493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	8649167	8649702	8649446	Y	ODF4,SPDYE4,MFSD6L,CCDC42	NA	NA	NA	NA	NA	MYH10	117088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	9741106	9741641	9741382	Y	NA	GLP2R	RCVRN,GAS7	IMR90	Hi-C	24141950	GLP2R	17583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	11928413	11928725	11928507	Y	NA	ZNF18,MAP2K4	NA	NA	NA	NA	MAP2K4	6272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	13249594	13249869	13249742	Y	HS3ST3A1	NA	HS3ST3B1,HS3ST3A1	IMR90	Hi-C	24141950	ELAC2	330090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	14044844	14045160	14045003	Y	NA	NA	NA	NA	NA	NA	COX10	74031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	14206072	14206436	14206180	Y	HS3ST3B1	HS3ST3B1	NA	NA	NA	NA	HS3ST3B1	3672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.283012805831294
chr17	14206578	14206754	14206653	Y	NA	HS3ST3B1	NA	NA	NA	NA	HS3ST3B1	4178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157774158124402
chr17	14206970	14207459	14207274	Y	HS3ST3B1	HS3ST3B1	NA	NA	NA	NA	HS3ST3B1	4570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr17	14212324	14213048	14212775	Y	HS3ST3B1	HS3ST3B1	NA	NA	NA	NA	HS3ST3B1	9924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.328370300800652
chr17	14254817	14255197	14255011	Y	HS3ST3B1	AC022816.2	NA	NA	NA	NA	AC022816.2	20259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	14276548	14276781	14276600	Y	NA	AC022816.2	NA	NA	NA	NA	AC022816.2	1092	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.10334823385365
chr17	14508636	14508878	14508796	Y	HS3ST3B1	NA	NA	NA	NA	NA	RPS18P12	97973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	14641682	14642082	14641822	Y	HS3ST3B1	RPS18P12	HS3ST3B1	IMR90	Hi-C	24141950	RPS18P12	34831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	15153959	15154348	15154277	Y	NA	PMP22	NA	NA	NA	NA	PMP22	12295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	15363919	15364293	15364237	Y	NA	NA	NA	NA	NA	NA	SNORA74	111040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr17	15393997	15394379	15394217	Y	PMP22,FAM18B2	NA	NA	NA	NA	NA	SNORA74	80954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	15849102	15849709	15849209	Y	ZSWIM7,TTC19,ADORA2B	ADORA2B	NA	NA	NA	NA	ADORA2B	2871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	15923170	15923610	15923287	Y	FAM18B2,ZNF286A,NCOR1,TTC19,ZSWIM7	TTC19,ZSWIM7	NA	NA	NA	NA	ZSWIM7	22139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	15925706	15925935	15925791	Y	FAM18B2,PIGL,NCOR1,TTC19,ZSWIM7	TTC19,ZSWIM7	NA	NA	NA	NA	ZSWIM7	24675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	16189250	16189597	16189494	Y	NCOR1,TRPV2	NA	NA	NA	NA	NA	CENPV	65373	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.56889486817909
chr17	16191035	16191327	16191109	Y	TRPV2	NA	CENPV	IMR90	Hi-C	24141950	CENPV	63643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr17	16249780	16250130	16249956	Y	CENPV	CENPV,UBB	NA	NA	NA	NA	CENPV	4840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr17	16319642	16320463	16320033	Y	NA	UBB,TRPV2	NA	NA	NA	NA	TRPV2	2786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr17	16438910	16439232	16439111	Y	NA	ZNF287	NA	NA	NA	NA	ZNF287	31288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.760288909029856
chr17	16440164	16440317	16440266	Y	ZNF624,CCDC144A	ZNF287	NA	NA	NA	NA	ZNF287	30203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	16487545	16487788	16487743	Y	NA	ZNF287,AC005822.1	NA	NA	NA	NA	ZNF287	17025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	16944636	16944769	16944688	Y	NA	MPRIP	NA	NA	NA	NA	MPRIP	777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	17098696	17098916	17098799	Y	MPRIP,RAI1,PEMT,NT5M,MED9,COPS3,PLD6,FLCN	PLD6,FLCN	NA	NA	NA	NA	PLD6	8713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	17319893	17320013	17319952	Y	FLCN	RPL13P12	NA	NA	NA	NA	RPL13P12	34567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	17338782	17338902	17338881	Y	NA	MED9	NA	NA	NA	NA	MED9	39398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	17348587	17348892	17348689	Y	NA	MED9,RASD1	MED9,PEMT	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MED9	29408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr17	17484274	17484547	17484424	Y	NA	PEMT	NA	NA	NA	NA	PEMT	8475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr17	17493657	17493822	17493814	Y	RASD1,SREBF1,PEMT,PEMT	PEMT	NA	NA	NA	NA	PEMT	635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	17596410	17596829	17596636	Y	NA	RAI1	NA	NA	NA	NA	RAI1	13623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	17597479	17598220	17598134	Y	ALKBH5,FLCN,COPS3	RAI1	NA	NA	NA	NA	RAI1	14692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.47300227888368
chr17	17617254	17617499	17617388	Y	NA	RAI1	NA	NA	NA	NA	RAI1	34467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	17655489	17655938	17655636	Y	DRG2,ALKBH5,COPS3,MED9	NA	NA	NA	NA	NA	RAI1	72702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.560597104320409
chr17	17686462	17687119	17686716	Y	NA	NA	NA	NA	NA	NA	SREBF1	51206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr17	17725605	17725781	17725666	Y	NA	SREBF1	NA	NA	NA	NA	SREBF1	12544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	17743258	17743857	17743527	Y	SMCR8	SREBF1	NA	NA	NA	NA	SREBF1	4933	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.67719780476402
chr17	17817256	17817562	17817444	Y	SREBF1	NA	NA	NA	NA	NA	TOM1L2	56174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	17861466	17861608	17861562	Y	SMCR8	TOM1L2,LRRC48	NA	NA	NA	NA	TOM1L2	12128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	18128078	18128354	18128155	Y	NA	ALKBH5,LLGL1,FLII	NA	NA	NA	NA	LLGL1	1177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chr17	18825562	18825708	18825647	Y	FAM83G,TRIM16L	SLC5A10	NA	NA	NA	NA	SLC5A10	25950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	19268894	19269122	19269008	Y	NA	MAPK7,B9D1,MFAP4	NA	NA	NA	NA	MAPK7	9912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	19273192	19273452	19273316	Y	FAM83G,MAPK7,MAPK7	MAPK7,B9D1,MFAP4	NA	NA	NA	NA	MAPK7	5582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	19398359	19398685	19398615	Y	NA	SLC47A1	SLC47A2,B9D1,EPN2	IMR90	Hi-C	24141950	SLC47A1	1661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	19411188	19411542	19411351	Y	NA	SLC47A1	EPN2,SLC47A2,B9D1,ALDH3A2,ALDH3A1,ULK2	IMR90	Hi-C	24141950	SLC47A1	14490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	20688064	20688832	20688343	Y	NA	OLA1P2,SCDP1	NA	NA	NA	NA	SCDP1	2106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.808274942328929
chr17	20755696	20755942	20755820	Y	NA	RP11-344E13.3,CCDC144NL	NA	NA	NA	NA	RP11-344E13.3	13804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	20943914	20944165	20944106	Y	NA	USP22	NA	NA	NA	NA	USP22	908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	21002403	21002809	21002523	Y	KCNJ18	DHRS7B	USP22,C17orf103	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DHRS7B	21868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	21070786	21070950	21070861	Y	NA	DHRS7B,AC087294.2,TMEM11	NA	NA	NA	NA	AC087294.2	44694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	21179100	21179414	21179208	Y	CCDC144NL,KCNJ12,C17orf103,MAP2K3,MAP2K3	C17orf103,MAP2K3	MAP2K3,KCNJ12,C17orf51,USP22,DHRS7B,C17orf103	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAP2K3	6570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.394606314386552
chr17	21189600	21190105	21189864	Y	MAP2K3,MAP2K3	C17orf103,MAP2K3	NA	NA	NA	NA	MAP2K3	3616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.688955916529289
chr17	25409900	25410125	25410078	Y	NA	NA	NA	NA	NA	NA	WSB1	208977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr17	25410571	25410806	25410743	Y	NA	NA	NA	NA	NA	NA	WSB1	208296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr17	25416172	25416581	25416426	Y	NA	NA	NA	NA	NA	NA	WSB1	202521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr17	25620233	25620423	25620280	Y	NA	WSB1	NA	NA	NA	NA	WSB1	1131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	25659360	25659787	25659571	Y	LGALS9,WSB1	WSB1	NA	NA	NA	NA	WSB1	40258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr17	25659975	25660361	25659997	Y	NA	WSB1	NA	NA	NA	NA	WSB1	40873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.25671711281056
chr17	25680204	25680481	25680340	Y	LGALS9,WSB1	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	25680632	25681097	25680982	Y	NA	NA	KSR1,WSB1,MIR4522	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WSB1	61530	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.60529370878845
chr17	25784873	25785075	25784939	Y	WSB1,LGALS9	KSR1	KSR1	MCF7	ChIA-PET	22265404	KSR1	3203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	25805507	25805777	25805623	Y	NA	KSR1	NA	NA	NA	NA	KSR1	23837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	25821459	25821654	25821516	Y	NA	KSR1	NA	NA	NA	NA	KSR1	39789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	25821729	25821988	25821800	Y	NA	KSR1	NA	NA	NA	NA	KSR1	40059	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.34660029317241
chr17	25823612	25823763	25823676	Y	NA	KSR1	NA	NA	NA	NA	KSR1	41942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	25856308	25856397	25856353	Y	WSB1,LGALS9	NA	NA	NA	NA	NA	KSR1	74638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	25859435	25859718	25859540	Y	WSB1,LGALS9	NA	NA	NA	NA	NA	KSR1	77765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	25891638	25891876	25891756	Y	NA	NA	NA	NA	NA	NA	KSR1	109968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	26368091	26368384	26368254	Y	NA	NLK	NA	NA	NA	NA	NLK	1328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	26552347	26552427	26552387	Y	NA	NA	NA	NA	NA	NA	TMEM97	91694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	27072804	27073286	27072989	Y	TRAF4	PROCA1,RPL23A,SNORD42B,SNORD42A,SNORD4B,NEK8,TLCD1,TRAF4	NA	NA	NA	NA	TRAF4	3802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	27100910	27101180	27101019	Y	NA	NEK8,TLCD1,TRAF4	NA	NA	NA	NA	TRAF4	31908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	27116093	27116114	27116106	Y	NA	TRAF4	NA	NA	NA	NA	TRAF4	47091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr17	27129097	27129445	27129306	Y	NA	NA	NA	NA	NA	NA	ERAL1	50511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	27138672	27138846	27138777	Y	NA	ERAL1	NA	NA	NA	NA	ERAL1	41110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	27264479	27264617	27264556	Y	UNC119,SDF2,FLOT2,TIAF1,TAOK1,NUFIP2,PHF12	FLOT2,DHRS13,PIPOX,PHF12	NA	NA	NA	NA	PIPOX	10914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	27475765	27476166	27476073	Y	NEK8,PHF12	MYO18A	NA	NA	NA	NA	MYO18A	29264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151202812300115
chr17	27482450	27482602	27482543	Y	NA	MYO18A	NA	NA	NA	NA	MYO18A	22828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr17	27506307	27506816	27506504	Y	TLCD1,TLCD1,TRAF4,GIT1,MYO18A	MYO18A	NA	NA	NA	NA	MYO18A	877	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.43281156194024
chr17	27530741	27530989	27530946	Y	NA	MYO18A	MYO18A,TAOK1,NUFIP2	IMR90	Hi-C	24141950	MYO18A	25311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	27824938	27824945	27824941	Y	TIAF1,MYO18A,TAOK1,EFCAB5,ANKRD13B	NA	NA	NA	NA	NA	TP53I13	66125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	27918115	27918172	27918144	Y	GIT1,ANKRD13B	TP53I13,ABHD15,ANKRD13B,GIT1,CORO6	NA	NA	NA	NA	GIT1	900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr17	27918652	27918967	27918817	Y	GIT1,EFCAB5,ANKRD13B	TP53I13,ABHD15,ANKRD13B,GIT1,CORO6	NA	NA	NA	NA	GIT1	105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	27919265	27919579	27919303	Y	NA	TP53I13,ABHD15,ANKRD13B,GIT1,CORO6	NA	NA	NA	NA	GIT1	193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	27966112	27966641	27966332	Y	NA	GIT1,CORO6	NA	NA	NA	NA	CORO6	18187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	28009923	28010244	28010118	Y	SSH2	NA	NA	NA	NA	NA	CORO6	61998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	28037853	28038223	28038205	Y	NA	NA	NA	NA	NA	NA	CORO6	89928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	28041794	28041800	28041797	Y	NA	NA	NA	NA	NA	NA	CORO6	93869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	28210608	28210734	28210655	Y	NA	SSH2	NA	NA	NA	NA	SSH2	44560	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	28431711	28432027	28431733	Y	NA	NSRP1	NA	NA	NA	NA	NSRP1	8512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	28533256	28533617	28533437	Y	SLC6A4	SNORD63	NA	NA	NA	NA	SNORD63	38221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr17	28672650	28672985	28672901	Y	NSRP1,CPD,CPD	CPD	NSRP1,TMIGD1,GOSR1,CPD,EFCAB5,MIR3184,SLC6A4,BLMH	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CPD	30938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.385567039584513
chr17	28928053	28928382	28928251	Y	NA	SMURF2P1	NA	NA	NA	NA	SMURF2P1	2239	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr17	29115484	29115559	29115508	Y	NA	CRLF3,CTD-2349P21.1,ATAD5	NA	NA	NA	NA	CRLF3	34235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	29176780	29177123	29176952	Y	NA	CRLF3,CTD-2349P21.1,ATAD5	NA	NA	NA	NA	ATAD5	19792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	29210096	29210162	29210129	Y	NA	ADAP2,TEFM	NA	NA	NA	NA	ADAP2	21200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	29212303	29212381	29212342	Y	OMG,NF1,C17orf42	ADAP2,TEFM	NA	NA	NA	NA	ADAP2	18981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	29277787	29277930	29277859	Y	EVI2A,CRLF3,ADAP2,RNF135	ADAP2,TEFM	NA	NA	NA	NA	TEFM	45949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	29423002	29423667	29423241	Y	NA	NF1	NA	NA	NA	NA	NF1	3057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	29759240	29759393	29759318	Y	NA	RAB11FIP4	NA	NA	NA	NA	RAB11FIP4	42598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	29764327	29764507	29764417	Y	NA	RAB11FIP4	NA	NA	NA	NA	RAB11FIP4	47685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	29816760	29817002	29816913	Y	NA	NA	NA	NA	NA	NA	RAB11FIP4	100118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr17	29820298	29820473	29820377	Y	EVI2B,EVI2A,SUZ12	NA	NA	NA	NA	NA	RAB11FIP4	103656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	29867919	29868196	29868058	Y	NA	NA	NA	NA	NA	NA	RAB11FIP4	151277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	29876692	29877391	29877039	Y	NA	NA	NA	NA	NA	NA	RAB11FIP4	160050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.806960673164072
chr17	29887922	29888057	29887990	Y	NA	NA	MIR4725,MIR365B	IMR90	Hi-C	24141950	RAB11FIP4	171280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	30724674	30725107	30724769	Y	RHOT1	C17orf75,ZNF207,PSMD11	NA	NA	NA	NA	PSMD11	44172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	30778136	30778420	30778202	Y	ZNF207	PSMD11,CDK5R1	NA	NA	NA	NA	PSMD11	8857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	30837973	30838187	30838080	Y	CDK5R1	CDK5R1	NA	NA	NA	NA	CDK5R1	26336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	30847234	30847756	30847477	Y	NA	CDK5R1	NA	NA	NA	NA	CDK5R1	35597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	31062983	31063086	31063034	Y	NA	NA	NA	NA	NA	NA	MYO1D	139109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	31155018	31155230	31155072	Y	MYO1D	MYO1D	NA	NA	NA	NA	MYO1D	46965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr17	31254083	31254387	31254296	Y	NA	TMEM98	NA	NA	NA	NA	TMEM98	1155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr17	32049616	32049940	32049779	Y	NA	NA	NA	NA	NA	NA	TMEM98	796688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	32365538	32365912	32365713	Y	NA	NA	NA	NA	NA	NA	ZNF830	920637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	33349623	33350064	33349994	Y	SLFN5,SLFN12L,CCT6B,ZNF830,RFFL	LIG3,CCT6B	NA	NA	NA	NA	CCT6B	43526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	33378276	33378529	33378387	Y	SLFN5,SLFN12L,ZNF830,RFFL	RFFL	NA	NA	NA	NA	RFFL	35809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	33414530	33415581	33415167	Y	SLFN5,ZNF830,RFFL	RFFL,RAD51D	NA	NA	NA	NA	RFFL	192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.258031381975417
chr17	33787408	33787803	33787736	Y	ZNF830,SLFN5,CCL5,SLFN12L	NA	NA	NA	NA	NA	AP2B1	115262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	34045470	34045815	34045642	Y	NA	RASL10B	RASL10B	IMR90	Hi-C	24141950	RASL10B	10853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	34160214	34160648	34160302	Y	NA	TAF15,CCL5	NA	NA	NA	NA	TAF15	25755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	34383347	34383807	34383653	Y	CCL5,CCL3L3,CCL3L1,CCL23,CCL4,CCL3	NA	CCL16,CCL4,CCL18,CCL23	IMR90	Hi-C	24141950	CCL14	56247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	34871446	34871455	34871448	Y	NA	ZNHIT3,PIGW,MYO19,GGNBP2	NA	NA	NA	NA	PIGW	17392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	34875469	34875747	34875679	Y	NA	ZNHIT3,PIGW,MYO19,GGNBP2	NA	NA	NA	NA	PIGW	13100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	34948982	34949076	34949029	Y	DHRS11	DHRS11,MRM1	NA	NA	NA	NA	DHRS11	2754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr17	35278050	35278157	35278104	Y	MRM1	AATF	LHX1,AATF	MCF7	ChIA-PET	22265404	AATF	26018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	35492690	35492856	35492817	Y	NA	NA	NA	NA	NA	NA	AATF	188515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	35520107	35520138	35520123	Y	ACACA	NA	NA	NA	NA	NA	AATF	215932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206754265098808
chr17	35682301	35682446	35682421	Y	NA	NA	NA	NA	NA	NA	ACACA	82463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	36068867	36069181	36068997	Y	ACACA,HNF1B	RP11-115K3.1,HNF1B	NA	NA	NA	NA	RP11-115K3.1	34025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.343820823682216
chr17	36073088	36073441	36073335	Y	ACACA,HNF1B	RP11-115K3.1,HNF1B	NA	NA	NA	NA	RP11-115K3.1	29765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	36101828	36102076	36101951	Y	DDX52,HNF1B	RP11-115K3.1,HNF1B	NA	NA	NA	NA	RP11-115K3.1	1130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.297149059548
chr17	36102823	36103051	36102995	Y	ACACA,DDX52,HNF1B	RP11-115K3.1,HNF1B	NA	NA	NA	NA	RP11-115K3.1	155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.450648881750318
chr17	36103612	36103841	36103732	Y	HNF1B	RP11-115K3.1,HNF1B	NA	NA	NA	NA	HNF1B	375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.911983347502244
chr17	36122885	36123141	36123013	Y	NA	RP11-115K3.1,HNF1B	DDX52,HNF1B,SYNRG	IMR90	Hi-C	24141950	HNF1B	19648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	36412216	36412471	36412263	Y	NA	RP11-1407O15.2,MRPL45	NA	NA	NA	NA	RP11-1407O15.2	7387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	36480536	36480738	36480637	Y	NA	MRPL45,SOCS7	NA	NA	NA	NA	SOCS7	25373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	36571646	36572076	36571709	Y	C17orf96	ARHGAP23	NA	NA	NA	NA	ARHGAP23	10586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.602674848650217
chr17	36813395	36813674	36813472	Y	ARHGAP23,C17orf96,SRCIN1	C17orf96,MLLT6	NA	NA	NA	NA	C17orf96	15513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.868762764690328
chr17	36859613	36860666	36860145	Y	NA	C17orf96,CISD3,PCGF2,PSMB3	NA	NA	NA	NA	MLLT6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	7.00563090444534
chr17	36907984	36908100	36908042	Y	NA	MLLT6,CISD3,PCGF2,PSMB3,PIP4K2B	NA	NA	NA	NA	PSMB3	995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	36996415	36996671	36996600	Y	SOCS7,FBXO47,C17orf98	PIP4K2B,CWC25,MIR4727,SNORA21,RPL23,RPS20P35,LASP1	NA	NA	NA	NA	SNORA21	10576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	37010933	37011093	37011014	Y	FBXO47,C17orf98	CWC25,MIR4727,SNORA21,RPL23,RPS20P35,LASP1	NA	NA	NA	NA	RPS20P35	1366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	37024501	37024874	37024707	Y	NA	CWC25,MIR4727,SNORA21,RPL23,RPS20P35,LASP1	NA	NA	NA	NA	LASP1	389	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.29672774409417
chr17	37027781	37027987	37027914	Y	FBXO47,CWC25	CWC25,MIR4727,SNORA21,RPL23,RPS20P35,LASP1	NA	NA	NA	NA	LASP1	3669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.599223667327918
chr17	37056956	37057300	37057070	Y	NA	SNORA21,RPL23,RPS20P35,LASP1	NA	NA	NA	NA	LASP1	32844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	37542274	37542291	37542284	Y	NA	FBXL20	NA	NA	NA	NA	FBXL20	14485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	37661852	37662117	37661985	Y	STAC2,FBXL20,MED1,CDK12	CDK12	NA	NA	NA	NA	CDK12	46088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	37831191	37831499	37831297	Y	GSDMB,GRB7,GRB7,GRB7,PGAP3,ERBB2	STARD3,ERBB2,PGAP3	NA	NA	NA	NA	ERBB2	10668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr17	37896808	37897181	37897022	Y	GRB7,GRB7,GRB7,GRB7	PGAP3,MIEN1,GRB7	NA	NA	NA	NA	GRB7	4628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr17	37910411	37911394	37910787	Y	FBXL20,CDK12,STARD3,WIPF2,ORMDL3,IKZF3,CASC3	MIEN1,GRB7	NA	NA	NA	NA	GRB7	18231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.404960369960649
chr17	38095307	38095463	38095385	Y	NA	ORMDL3,PSMD3	NA	NA	NA	NA	ORMDL3	13453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	38170793	38171091	38171022	Y	CSF3	PSMD3,CSF3,THRA,MED24	NA	NA	NA	NA	CSF3	1179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	38227405	38227627	38227516	Y	GSDMB	THRA,MED24,NR1D1,MSL1	NA	NA	NA	NA	MED24	11937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	38227745	38227903	38227871	Y	NEUROD2,THRA	THRA,MED24,NR1D1,MSL1	NA	NA	NA	NA	MED24	12277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr17	38229285	38229466	38229392	Y	GSDMB	THRA,MED24,NR1D1,MSL1	NA	NA	NA	NA	MED24	13817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr17	38254249	38254664	38254597	Y	GRB7,WIPF2,RARA,RARA,NR1D1	THRA,MED24,NR1D1,MSL1,CASC3	NA	NA	NA	NA	NR1D1	314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr17	38263317	38263642	38263602	Y	NA	MED24,NR1D1,MSL1,CASC3	NA	NA	NA	NA	NR1D1	8339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	38264417	38264842	38264667	Y	WIPF2,RARA,RARA,NR1D1	MED24,NR1D1,MSL1,CASC3	NA	NA	NA	NA	NR1D1	9439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr17	38480180	38480741	38480429	Y	IKZF3,CASC3,WIPF2,CCR7,RARA,RARA	CDC6,RARA	NA	NA	NA	NA	RARA	16736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	38482426	38483282	38482568	Y	IKZF3,MSL1,CASC3,WIPF2,RARA,RARA	CDC6,RARA	NA	NA	NA	NA	RARA	18982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	38502716	38503032	38502793	Y	NA	RARA	NA	NA	NA	NA	RARA	39272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	38509274	38509600	38509311	Y	NA	RARA	NA	NA	NA	NA	RARA	45830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351214812499087
chr17	38514847	38514935	38514891	Y	NA	NA	NA	NA	NA	NA	RARA	51403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	38601076	38601487	38601191	Y	GJD3,IGFBP4	TOP2A,IGFBP4	NA	NA	NA	NA	IGFBP4	3374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr17	38648531	38648872	38648707	Y	KRT10,MSL1,TNS4	TNS4	NA	NA	NA	NA	TNS4	6977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	38655848	38656036	38655907	Y	GJD3,IGFBP4,TNS4	NA	NA	NA	NA	NA	TNS4	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.224501797882575
chr17	38656717	38656888	38656754	Y	KRT24,KRT10,TNS4	TNS4	NA	NA	NA	NA	TNS4	868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	38666550	38666883	38666717	Y	TNS4	TNS4	CDC6,TOP2A,IGFBP4,TNS4,CCR7,KRT42P	IMR90	Hi-C	24141950	TNS4	10701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	38674878	38675250	38674921	Y	TMEM99,TMEM99,TMEM99,CDC6,TOP2A,TNS4	TNS4,CCR7	IGFBP4,KRT42P,CCR7,RARA,GJD3,TOP2A,TNS4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNS4	19029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	38689625	38689996	38689764	Y	NA	TNS4,CCR7	NA	NA	NA	NA	CCR7	29728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	38703564	38704159	38703879	Y	SMARCE1,MED24,CASC3,TOP2A,CCR7	TNS4,CCR7	NA	NA	NA	NA	CCR7	15565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	38705273	38706158	38705806	Y	GJD3,IGFBP4	TNS4,CCR7	NA	NA	NA	NA	CCR7	13566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.25671711281056
chr17	38707495	38707811	38707586	Y	KRTAP1-5,GJD3,IGFBP4	CCR7	NA	NA	NA	NA	CCR7	11913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.306679960522312
chr17	38708057	38709216	38708396	Y	KRTAP1-5,GJD3,IGFBP4	CCR7	NA	NA	NA	NA	CCR7	10508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.604811760807659
chr17	39088847	39089143	39089005	Y	NA	KRT20,KRT23	NA	NA	NA	NA	KRT23	2743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	39091937	39092186	39091988	Y	KRTAP2-1	KRT23	NA	NA	NA	NA	KRT23	51	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	39110175	39110404	39110304	Y	KRTAP3-2	KRT23	NA	NA	NA	NA	KRT23	18289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	39113005	39113367	39113263	Y	NA	KRT23	NA	NA	NA	NA	KRT23	21119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.482864196678303
chr17	39572335	39572530	39572426	Y	NA	NA	NA	NA	NA	NA	KRT19	110030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	39683248	39683750	39683386	Y	NA	KRT19	NA	NA	NA	NA	KRT19	688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	39685394	39685532	39685463	Y	KRTAP2-1,KRTAP2-2,KRTAP9-1,KRTAP9-2,KRTAP9-9	KRT19	NA	NA	NA	NA	KRT19	2834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	39686458	39686891	39686666	Y	KRT19	KRT19	NA	NA	NA	NA	KRT19	3898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217930452058288
chr17	39695431	39695775	39695718	Y	NA	KRT19	KRT19	K562	ChIA-PET	22265404	KRT19	12871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	39703664	39703881	39703736	Y	NA	KRT19	NA	NA	NA	NA	KRT19	21104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	39705098	39705383	39705310	Y	NA	KRT19	NA	NA	NA	NA	KRT19	22538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr17	39802138	39802335	39802276	Y	NKIRAS2,NKIRAS2,DHX58,EIF1	KRT17,EIF1	KRT19,KRT15	MCF7	ChIA-PET	22265404	KRT17	23044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	39822130	39822941	39822323	Y	NA	KRT17,EIF1,GAST	KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	EIF1	20196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr17	39823354	39823685	39823437	Y	NA	KRT17,EIF1,GAST	KRT19,KRT15,CCR7,SMARCE1,KRT222,KRT26,KRT25,KRT28,KRT10,TMEM99,KRT27,KRT20,KRT23,KRTAP2-2,KRTAP2-1,KRTAP2-4,LOC730755,KRTAP17-1,KRT14,LOC147093,KRT9,EIF1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	EIF1	19452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	39832714	39833014	39832798	Y	RAB5C,NKIRAS2,DNAJC7,DHX58,EIF1	EIF1,GAST	SMARCE1,KRT222,KRT28,KRT26,KRT27,TMEM99,KRT10,KRT20,KRTAP3-2,KRTAP3-3,EIF1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	EIF1	10123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	39861814	39861964	39861889	Y	TTC25	EIF1,GAST,HAP1	NA	NA	NA	NA	GAST	4614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	39949517	39949745	39949566	Y	KRT36,KRT15,KRT19,KRT9,KRT14,KRT16,KRT17,JUP	JUP,LEPREL4,FKBP10	NA	NA	NA	NA	JUP	8334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.274464645594328
chr17	39956975	39957353	39957171	Y	KRT15,KRT19,KRT14,KRT16,KRT17,JUP	JUP,LEPREL4,FKBP10	NA	NA	NA	NA	LEPREL4	9503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	40155760	40155995	40155877	Y	STAT5A	CNP,NKIRAS2,DNAJC7	NA	NA	NA	NA	NKIRAS2	5405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	40240476	40240486	40240480	Y	KLHL10,TTC25,CNP,HSPB9	ZNF385C,DHX58,KAT2A	NA	NA	NA	NA	DHX58	22265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr17	40400517	40401003	40400833	Y	EZH1,KLHL11,RAB5C,STAT3,STAT3,FAM134C,STAT5B,STAT5A	STAT5B,STAT5A	NA	NA	NA	NA	STAT5B	25722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	40464466	40464885	40464704	Y	STAT5A	STAT5B,STAT5A	NA	NA	NA	NA	STAT5A	26901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	40539110	40539537	40539349	Y	NA	STAT3,PTRF	NA	NA	NA	NA	STAT3	524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	40628029	40628344	40628111	Y	NA	ATP6V0A1,AC067852.1	NA	NA	NA	NA	ATP6V0A1	19167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	40671173	40671319	40671240	Y	PTRF	AC067852.1,NAGLU,COASY,MLX	NA	NA	NA	NA	AC067852.1	417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr17	40689876	40689925	40689901	Y	NA	AC067852.1,NAGLU,COASY,MLX,PSMC3IP	NA	NA	NA	NA	NAGLU	3686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	40816292	40816343	40816318	Y	NA	TUBG2,PLEKHH3,CNTNAP1	NA	NA	NA	NA	TUBG2	6969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	40942176	40942529	40942199	Y	NA	EZH1,RAMP2,VPS25,WNK4,CNTD1,PSME3,BECN1	NA	NA	NA	NA	CNTD1	6281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	41017672	41017950	41017805	Y	NA	PSME3,BECN1,AOC3,G6PC	NA	NA	NA	NA	AOC3	16471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.330838741385604
chr17	41162878	41163074	41162972	Y	TUBG1,CNTD1,NBR1,NBR1,ETV4	AARSD1,RUNDC1,RPL27,IFI35,VAT1,RND2	NA	NA	NA	NA	IFI35	6136	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19335035574117
chr17	41173099	41173334	41173293	Y	NAGLU,VAT1	RUNDC1,RPL27,IFI35,VAT1,RND2	NA	NA	NA	NA	VAT1	1806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr17	41324260	41324525	41324381	Y	TMEM106A	BRCA1,NBR2,NBR1,TMEM106A	NA	NA	NA	NA	NBR1	3762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	41546701	41546836	41546769	Y	NA	DHX8	DHX8,ARL4D,LOC100130581	IMR90	Hi-C	24141950	DHX8	12397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	41656262	41656390	41656311	Y	G6PC3	ETV4	DHX8,MIR2117,MPP2	IMR90	Hi-C	24141950	ETV4	1274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	41657407	41657423	41657415	Y	MPP2	ETV4	DHX8,MIR2117,MPP2	IMR90	Hi-C	24141950	ETV4	2419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	41796772	41797488	41797204	Y	TMUB2,TMEM106A,DHX8,DUSP3	NA	LOC100130581,MPP3,DUSP3,DHX8,ETV4,MEOX1,C17orf105,SOST,CD300LG,HDAC5	IMR90	Hi-C	24141950	DUSP3	56868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	42061095	42061375	42061233	Y	NA	NAGS,TMEM101	NA	NA	NA	NA	NAGS	18539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	42173050	42173151	42173101	Y	TMEM101,G6PC3	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	25919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr17	42173326	42173627	42173470	Y	NA	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	25443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.503571796219296
chr17	42174643	42174888	42174769	Y	NA	LSM12,G6PC3,HDAC5,C17orf53	NA	NA	NA	NA	HDAC5	24182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	42215472	42215904	42215679	Y	C17orf53	HDAC5,C17orf53,TMUB2	C17orf53	MCF7	ChIA-PET	22265404	C17orf53	1370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	42245888	42246083	42245988	Y	NA	HDAC5,C17orf53,TMUB2,ATXN7L3	NA	NA	NA	NA	TMUB2	16255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	42276572	42276897	42276785	Y	TMEM101,G6PC3,HDAC5,GRN,TMUB2,TMUB2,ATXN7L3	TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	1091	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.66140709847786
chr17	42278333	42278607	42278473	Y	ATXN7L3	TMUB2,ATXN7L3,UBTF	NA	NA	NA	NA	ATXN7L3	2852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	42357085	42357361	42357237	Y	TMUB2,TMUB2,GPATCH8,GRN	SLC25A39	SLC4A1,RUNDC3A,UBTF,SLC25A39	IMR90	Hi-C	24141950	SLC25A39	42877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	42404001	42404290	42404282	Y	C17orf65,TMUB2,TMUB2,UBTF,ITGA2B,SLC4A1,SLC25A39	SLC25A39,GRN,FAM171A2	NA	NA	NA	NA	SLC25A39	3763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr17	42589268	42589584	42589359	Y	C17orf53,GJC1,DBF4B,CCDC43,C17orf104	GPATCH8	ATXN7L3,GPATCH8	K562	ChIA-PET	22265404	GPATCH8	10470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	42797981	42798248	42798116	Y	CCDC43	CCDC43,DBF4B,RP11-1072C15.1,ADAM11	NA	NA	NA	NA	RP11-1072C15.1	2016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr17	42919802	42920006	42919936	Y	NA	GJC1	NA	NA	NA	NA	GJC1	13618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	43018379	43018606	43018493	Y	NA	CCDC103,EFTUD2,FAM187A,GFAP,KIF18B,C1QL1	NA	NA	NA	NA	KIF18B	4476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr17	43170304	43170536	43170449	Y	ADAM11,HIGD1B,GFAP	NMT1,DCAKD,ACBD4,PLCD3	NA	NA	NA	NA	DCAKD	33831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	43201428	43201633	43201517	Y	NA	ACBD4,PLCD3,HEXIM1,HEXIM2	NA	NA	NA	NA	ACBD4	6334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	43249989	43250354	43250021	Y	ADAM11,HIGD1B,GFAP,DCAKD	ACBD4,PLCD3,HEXIM1,HEXIM2,FMNL1	NA	NA	NA	NA	HEXIM2	13922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.709011792153246
chr17	43253543	43253622	43253574	Y	NA	ACBD4,PLCD3,HEXIM1,HEXIM2,FMNL1	NA	NA	NA	NA	HEXIM2	17476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	43305165	43306978	43306453	Y	PLEKHM1,ARHGAP27,FMNL1	FMNL1	NA	NA	NA	NA	FMNL1	8354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr17	43385085	43385291	43385153	Y	HEXIM1,FMNL1,PLEKHM1,MAP3K14,ARHGAP27	MAP3K14	LOC100133991,FMNL1	IMR90	Hi-C	24141950	MAP3K14	7123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	43389475	43389771	43389724	Y	FMNL1,PLEKHM1,MAP3K14	MAP3K14	TEX34,LOC100133991	IMR90	Hi-C	24141950	MAP3K14	2643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	43449108	43449433	43449167	Y	NA	NA	NA	NA	NA	NA	MAP3K14	56694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr17	43993191	43993527	43993444	Y	STH,MAPT	MAPT	NA	NA	NA	NA	MAPT	23443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	44113965	44114105	44114069	Y	KIAA1267,KIAA1267	NA	NA	NA	NA	NA	MAPT	144217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	44131950	44132178	44132002	Y	KIAA1267,KIAA1267	NA	NA	NA	NA	NA	MAPT	162202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	44155479	44155559	44155517	Y	NA	NA	NA	NA	NA	NA	MAPT	185731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	44198532	44198560	44198547	Y	NA	NA	NA	NA	NA	NA	MAPT	228784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	44240473	44240874	44240856	Y	NA	NA	NA	NA	NA	NA	MAPT	270725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr17	44261899	44262225	44262045	Y	NA	NA	NA	NA	NA	NA	MAPT	292151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	44344171	44344471	44344293	Y	NA	NA	KANSL1-AS1,KANSL1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MAPT	374423	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.40191051617711
chr17	44847625	44847956	44847902	Y	WNT3	NA	NA	NA	NA	NA	RPS7P11	50092	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.20929250479501
chr17	44848199	44848613	44848371	Y	NA	NA	NA	NA	NA	NA	RPS7P11	50666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	44848812	44849347	44849259	Y	NA	NA	NA	NA	NA	NA	RPS7P11	51279	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.25390848882101
chr17	45021726	45021957	45021796	Y	NA	GOSR2	NA	NA	NA	NA	GOSR2	23243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	45144155	45144236	45144196	Y	NA	NA	NPEPPS	IMR90	Hi-C	24141950	CDC27	120552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr17	45317390	45317724	45317566	Y	TBKBP1	MYL4	NA	NA	NA	NA	MYL4	41578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	45515544	45515843	45515768	Y	NA	NA	NA	NA	NA	NA	NPEPPS	82465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	45609469	45609601	45609554	Y	NA	NPEPPS	NA	NA	NA	NA	NPEPPS	11161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr17	45725037	45725352	45725118	Y	SP2	KPNB1	NA	NA	NA	NA	KPNB1	195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	45771013	45771467	45771041	Y	NPEPPS,OSBPL7,CDK5RAP3,TBX21,TBKBP1	KPNB1	NA	NA	NA	NA	KPNB1	46171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.248500481001105
chr17	45980057	45980402	45980230	Y	NA	SP6,SP2,AC003665.1,PNPO	NA	NA	NA	NA	SP2	8541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	45983662	45984115	45983847	Y	CDK5RAP3	SP2,AC003665.1,PNPO,PRR15L	PNPO	IMR90	Hi-C	24141950	SP2	12146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	46289129	46289412	46289274	Y	NA	NA	NA	NA	NA	NA	SNX11	110410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr17	47017432	47017466	47017449	Y	NA	ATP5G1,UBE2Z,SNF8,RNU1-42P	NA	NA	NA	NA	SNF8	3013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	47048763	47048955	47048859	Y	NA	SNF8,RNU1-42P,IGF2BP1	IGF2BP1	MCF7	ChIA-PET	22265404	IGF2BP1	23819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.453608948507544
chr17	47049793	47049986	47049890	Y	IGF2BP1,SNF8	SNF8,RNU1-42P,IGF2BP1	IGF2BP1	MCF7	ChIA-PET	22265404	IGF2BP1	22788	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.16491775056299
chr17	47081081	47081234	47081133	Y	NA	IGF2BP1	NA	NA	NA	NA	IGF2BP1	8307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr17	47081384	47081547	47081466	Y	NA	IGF2BP1	NA	NA	NA	NA	IGF2BP1	8610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	47092021	47092148	47092036	Y	NA	IGF2BP1	NA	NA	NA	NA	IGF2BP1	19247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	47099859	47100181	47099940	Y	PRAC,IGF2BP1	IGF2BP1	NA	NA	NA	NA	IGF2BP1	27085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	47113510	47113580	47113552	Y	NA	IGF2BP1	NA	NA	NA	NA	IGF2BP1	40736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	47270202	47270509	47270359	Y	CALCOCO2,ZNF652,ZNF652,GNGT2,GNGT2,GNGT2,ABI3	PHOSPHO1	NA	NA	NA	NA	PHOSPHO1	35619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341192285352501
chr17	47467973	47468124	47468044	Y	ABI3,PHOSPHO1,ZNF652,ZNF652,SPOP,MYST2,FAM117A	ZNF652,PHB,AC004797.1	NA	NA	NA	NA	PHB	22122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.273973019422054
chr17	47468290	47468719	47468487	Y	ZNF652,ZNF652	ZNF652,PHB,AC004797.1	NA	NA	NA	NA	PHB	21527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	47586040	47586243	47586212	Y	NA	NGFR	NA	NA	NA	NA	NGFR	15385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	47647130	47647802	47647650	Y	NA	NXPH3	ZNF652,NGFR,SPOP,SLC35B1,NXPH3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NXPH3	3418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	47765495	47765594	47765536	Y	ABI3,GNGT2,PHOSPHO1,ZNF652,ZNF652,PPP1R9B,MYST2,FAM117A,SPOP	SPOP,SLC35B1	NA	NA	NA	NA	SPOP	11899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	47815825	47816028	47815963	Y	MYST2,FAM117A,DLX4,DLX4	SLC35B1,KAT7,FAM117A	NA	NA	NA	NA	SLC35B1	31449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	47913501	47913854	47913589	Y	TMEM92	KAT7,FAM117A,RP11-613C6.4	NA	NA	NA	NA	RP11-613C6.4	42796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	47943194	47943405	47943297	Y	NA	NA	NA	NA	NA	NA	RP11-613C6.4	72489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	48208282	48208563	48208423	Y	NA	PDK2,SAMD14,PPP1R9B,SGCA,HILS1	NA	NA	NA	NA	SAMD14	3036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	48228924	48229616	48229504	Y	SPATA20,SAMD14	SAMD14,PPP1R9B,SGCA,HILS1,COL1A1	NA	NA	NA	NA	PPP1R9B	2933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233872601112125
chr17	48255388	48256117	48255676	Y	NA	PPP1R9B,SGCA,HILS1,COL1A1	NA	NA	NA	NA	HILS1	422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr17	48282931	48283079	48283012	Y	COL1A1,TMEM92	SGCA,HILS1,COL1A1	SGCA,HILS1	IMR90	Hi-C	24141950	COL1A1	5938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	48287695	48288075	48287880	Y	XYLT2,LRRC59,COL1A1	SGCA,HILS1,COL1A1	PDK2,ITGA3,COL1A1,PPP1R9B,SGCA,HILS1,TMEM92,XYLT2	IMR90	Hi-C	24141950	COL1A1	10702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	48504874	48504976	48504927	Y	NA	LRRC59,ACSF2,RSAD1	NA	NA	NA	NA	ACSF2	3355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	48716257	48716537	48716480	Y	NA	ABCC3	NA	NA	NA	NA	ABCC3	6119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	48726648	48726741	48726695	Y	NA	ABCC3	NA	NA	NA	NA	ABCC3	16510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr17	48942663	48943085	48943016	Y	NA	TOB1	NA	NA	NA	NA	TOB1	254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.283012805831294
chr17	48981540	48981884	48981711	Y	RSAD1	TOB1,RP11-700H6.1	TOB1,SPAG9,LINC00483,LOC400604,SPATA20,EPN3	IMR90	Hi-C	24141950	RP11-700H6.1	38190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	48996377	48996488	48996474	Y	RSAD1	RP11-700H6.1	LOC400604,TOB1,WFIKKN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-700H6.1	23586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	48996944	48997365	48997235	Y	UTP18,RSAD1,TOB1	RP11-700H6.1	LOC400604,TOB1,WFIKKN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-700H6.1	22709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr17	48998350	48998465	48998408	Y	CHAD	RP11-700H6.1	LOC400604,TOB1,WFIKKN2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-700H6.1	21609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	49031638	49031879	49031784	Y	NA	RP11-700H6.1	NA	NA	NA	NA	RP11-700H6.1	11564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	49182545	49182921	49182907	Y	NA	SPAG9,NME1,NME1-NME2,NME2	NA	NA	NA	NA	SPAG9	13305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	49324611	49324828	49324669	Y	MBTD1	MBTD1,UTP18	NA	NA	NA	NA	MBTD1	10696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	53017345	53017570	53017451	Y	TOM1L1	TOM1L1,STXBP4,COX11	NA	NA	NA	NA	STXBP4	26518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	53034991	53035170	53035032	Y	NA	STXBP4,COX11	NA	NA	NA	NA	STXBP4	8918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	53047778	53047982	53047880	Y	NA	STXBP4,COX11	NA	NA	NA	NA	COX11	3632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	53315618	53315983	53315841	Y	HLF	HLF	STXBP4,HLF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HLF	24390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr17	53361426	53361912	53361701	Y	MMD,COX11,STXBP4,HLF	HLF	NA	NA	NA	NA	HLF	21053	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.60346884875065
chr17	53394900	53394943	53394922	Y	NA	NA	NA	NA	NA	NA	HLF	54527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	53494121	53494283	53494202	Y	NA	MMD	NA	NA	NA	NA	MMD	3070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	53497202	53497618	53497598	Y	NA	NA	NA	NA	NA	NA	MMD	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314896592331768
chr17	53497797	53498268	53498065	Y	NA	MMD	NA	NA	NA	NA	MMD	444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.300268712442788
chr17	53510591	53510934	53510743	Y	NA	MMD	MMD,TMEM100,PCTP	IMR90	Hi-C	24141950	MMD	13238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr17	53875650	53875676	53875663	Y	NA	PCTP	NA	NA	NA	NA	PCTP	49310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	54857525	54857918	54857805	Y	NA	NA	NA	NA	NA	NA	DGKE	51542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	54864431	54864801	54864568	Y	TRIM25,SCPEP1	DGKE,C17orf67	NA	NA	NA	NA	DGKE	44659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	54947312	54947763	54947640	Y	SCPEP1,TRIM25	DGKE,C17orf67,TRIM25	NA	NA	NA	NA	C17orf67	33178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	54987224	54987877	54987630	Y	SCPEP1,TRIM25	TRIM25,COIL	NA	NA	NA	NA	TRIM25	1522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	54993018	54993544	54993286	Y	SCPEP1,TRIM25	TRIM25,COIL	DGKE	MCF7	ChIA-PET	22265404	TRIM25	3619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	55056156	55056413	55056229	Y	NA	COIL,SCPEP1	NA	NA	NA	NA	SCPEP1	2690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	55447287	55447561	55447443	Y	NA	NA	NA	NA	NA	NA	MSI2	116075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr17	55501996	55502706	55502262	Y	NA	NA	NA	NA	NA	NA	MSI2	170784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	55504815	55504992	55504904	Y	MSI2,MSI2	NA	NA	NA	NA	NA	MSI2	173603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	55517850	55518075	55517943	Y	NA	NA	NA	NA	NA	NA	MSI2	186638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	55518270	55518753	55518516	Y	MSI2,MSI2	NA	NA	NA	NA	NA	MSI2	187058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	55523126	55523573	55523446	Y	NA	NA	NA	NA	NA	NA	MSI2	191914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	55540558	55540950	55540705	Y	NA	NA	NA	NA	NA	NA	MSI2	209346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	55655246	55655454	55655378	Y	NA	NA	NA	NA	NA	NA	MRPS23	269963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.267070656777457
chr17	55690023	55690365	55690280	Y	MSI2,MSI2	NA	NA	NA	NA	NA	MRPS23	235052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	55734748	55734863	55734779	Y	DYNLL2	NA	NA	NA	NA	NA	MRPS23	190554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	55741402	55741415	55741409	Y	NA	NA	NA	NA	NA	NA	MRPS23	184002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	55938337	55938724	55938439	Y	SUPT4H1,CUEDC1	MRPS23	NA	NA	NA	NA	MRPS23	12920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21102808941369
chr17	55952714	55953105	55953007	Y	NA	MRPS23	NA	NA	NA	NA	MRPS23	27297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	55970352	55970806	55970481	Y	SUPT4H1,VEZF1	MRPS23	NA	NA	NA	NA	MRPS23	44935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.566025611662587
chr17	56013342	56013699	56013370	Y	NA	CUEDC1,VEZF1	VEZF1,CUEDC1,SRSF1	IMR90	Hi-C	24141950	CUEDC1	16985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	56015325	56015755	56015655	Y	CUEDC1	CUEDC1,VEZF1	VEZF1,CUEDC1,SRSF1	IMR90	Hi-C	24141950	CUEDC1	14929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr17	56023350	56023692	56023525	Y	NA	CUEDC1,VEZF1	CUEDC1,VEZF1	IMR90	Hi-C	24141950	CUEDC1	6992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	56025910	56026308	56026041	Y	SUPT4H1	CUEDC1,VEZF1	NA	NA	NA	NA	CUEDC1	4376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	56064193	56064677	56064258	Y	NA	CUEDC1,VEZF1,SRSF1	NA	NA	NA	NA	VEZF1	573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	56161643	56161969	56161895	Y	VEZF1,MTMR4	DYNLL2	NA	NA	NA	NA	DYNLL2	2867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	56419503	56419633	56419507	Y	OR4D2	SUPT4H1	NA	NA	NA	NA	SUPT4H1	8821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	56426877	56426962	56426920	Y	MTMR4,SUPT4H1	SUPT4H1	NA	NA	NA	NA	SUPT4H1	1492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	56428194	56428499	56428372	Y	VEZF1,MTMR4,SUPT4H1	NA	NA	NA	NA	NA	SUPT4H1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.496669433574699
chr17	56441767	56441894	56441848	Y	NA	SUPT4H1	NA	NA	NA	NA	SUPT4H1	13313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.767682897846727
chr17	56468859	56469318	56469005	Y	RNF43	SUPT4H1,RNF43	NA	NA	NA	NA	RNF43	23638	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05628379715776
chr17	56480586	56480907	56480747	Y	NA	RNF43	NA	NA	NA	NA	RNF43	12049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr17	56587640	56587744	56587729	Y	PPM1E,DYNLL2,MKS1,SEPT4,MTMR4	MTMR4,SEPT4	NA	NA	NA	NA	MTMR4	5522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr17	56736656	56737064	56736885	Y	MTMR4,SEPT4,SEPT4,PPM1E	RNU1-60P,RNU1-85P,RAD51C	SEPT4,C17orf47	K562,MCF7	ChIA-PET	22265404	RNU1-60P	1990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr17	57194064	57194075	57194070	Y	NA	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	TRIM37	11782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	57200500	57200626	57200599	Y	GDPD1	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	TRIM37	18218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	57231102	57231481	57231293	Y	C17orf71	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	PRR11	242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr17	57231530	57231848	57231723	Y	NA	AC099850.1,TRIM37,SKA2,PRR11	NA	NA	NA	NA	PRR11	670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr17	57298532	57298798	57298672	Y	NA	SMG8,GDPD1	NA	NA	NA	NA	GDPD1	2704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	57409690	57409997	57409875	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	2640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr17	57434419	57434635	57434527	Y	NA	YPEL2	NA	NA	NA	NA	YPEL2	27369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	57443443	57443708	57443557	Y	YPEL2	YPEL2	NA	NA	NA	NA	YPEL2	36393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	57698412	57698732	57698592	Y	YPEL2,RNFT1,VMP1	CLTC	NA	NA	NA	NA	CLTC	3193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	57830594	57831044	57830806	Y	VMP1,RNFT1	VMP1,PTRH2	NA	NA	NA	NA	PTRH2	47607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	57831888	57832338	57832062	Y	VMP1,RNFT1	VMP1,PTRH2	NA	NA	NA	NA	PTRH2	48901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr17	57841314	57841767	57841379	Y	NA	NA	NA	NA	NA	NA	PTRH2	58327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	57847286	57847866	57847541	Y	YPEL2,RNFT1	NA	NA	NA	NA	NA	PTRH2	64299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	57861698	57862055	57862024	Y	RNFT1	NA	NA	NA	NA	NA	MIR21	54572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	57862470	57862813	57862554	Y	NA	NA	NA	NA	NA	NA	MIR21	53814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	57863159	57864676	57863979	Y	NA	NA	NA	NA	NA	NA	MIR21	51951	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.08077410644856
chr17	57866887	57867071	57866969	Y	NA	MIR21	NA	NA	NA	NA	MIR21	49556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.539398390214343
chr17	57869540	57869779	57869705	Y	RNFT1	MIR21	NA	NA	NA	NA	MIR21	46848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	57905350	57905555	57905420	Y	NA	MIR21	NA	NA	NA	NA	MIR21	11072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr17	57906379	57907270	57906882	Y	RNFT1	MIR21	NA	NA	NA	NA	MIR21	9357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.490749811667448
chr17	57922999	57923843	57923122	Y	PTRH2,TUBD1,RPS6KB1,HEATR6	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	6372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr17	57929068	57929265	57929192	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	12441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr17	57930626	57931026	57930760	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	13999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.300760338615061
chr17	57932450	57932798	57932624	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	15823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	57932982	57933345	57933242	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	MIR21	16355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.289915168475891
chr17	57962596	57962816	57962625	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	TUBD1	5488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	57966021	57966396	57966241	Y	NA	MIR21,TUBD1,RPS6KB1	NA	NA	NA	NA	TUBD1	1908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	58467674	58467818	58467746	Y	BCAS3,RNFT1,CA4,PPM1D,APPBP2,USP32	USP32	NA	NA	NA	NA	USP32	30013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	58468371	58468697	58468395	Y	BCAS3,RNFT1,CA4,PPM1D,USP32	USP32	NA	NA	NA	NA	USP32	29134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	58470515	58470600	58470558	Y	RNFT1	USP32	NA	NA	NA	NA	USP32	27231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	58678620	58678973	58678714	Y	PPM1D	PPM1D	NA	NA	NA	NA	PPM1D	3076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr17	59213347	59213460	59213422	Y	TBX4,TBX2	NA	NA	NA	NA	NA	TBX2	261797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	59434096	59434461	59434196	Y	NA	TBX2	NA	NA	NA	NA	TBX2	40796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr17	59449966	59450070	59450027	Y	NA	TBX2	NA	NA	NA	NA	TBX2	25187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	59473194	59473360	59473229	Y	NA	TBX2	NA	NA	NA	NA	TBX2	1897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	59474585	59474918	59474715	Y	NA	TBX2	NA	NA	NA	NA	TBX2	339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	59491856	59491969	59491928	Y	NA	TBX2	NA	NA	NA	NA	TBX2	16599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	59532462	59532698	59532510	Y	NA	NA	NA	NA	NA	NA	TBX2	57205	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.72946899531596
chr17	59784149	59784411	59784258	Y	BRIP1	NA	NA	NA	NA	NA	NACA2	117586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	59786803	59787088	59786946	Y	NA	NA	NA	NA	NA	NA	NACA2	120240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	59939507	59939855	59939761	Y	BRIP1	BRIP1	NA	NA	NA	NA	BRIP1	625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	59956289	59956463	59956377	Y	NA	BRIP1,INTS2	BRIP1	IMR90	Hi-C	24141950	BRIP1	17407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr17	60085676	60086036	60086030	Y	NACA2,MED13	NA	NA	NA	NA	NA	MED13	54607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	60248976	60249158	60249063	Y	MED13	NA	NA	NA	NA	NA	MED13	108333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	60256998	60257133	60257064	Y	NA	NA	NA	NA	NA	NA	MED13	116355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	60555037	60555507	60555099	Y	NA	RP11-464D20.2	MRC2	IMR90	Hi-C	24141950	RP11-464D20.2	36621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	60973132	60973339	60973182	Y	TLK2	NA	NA	NA	NA	NA	RP11-464D20.2	381004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	61514078	61514307	61514301	Y	SMARCD2,DDX42,CYB561,CYB561	CYB561	NA	NA	NA	NA	CYB561	7432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	61629052	61629111	61629082	Y	NA	DCAF7,TACO1	NA	NA	NA	NA	DCAF7	3230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	61639369	61639739	61639552	Y	NA	DCAF7,TACO1	NA	NA	NA	NA	DCAF7	13547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	61779039	61779508	61779383	Y	NA	LIMD2,STRADA	NA	NA	NA	NA	LIMD2	2507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	61787185	61787371	61787278	Y	NA	LIMD2,STRADA	NA	NA	NA	NA	LIMD2	10653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	61796482	61796787	61796636	Y	NA	LIMD2,STRADA	NA	NA	NA	NA	LIMD2	19950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	61920991	61921115	61921104	Y	NA	PSMC5,FTSJ3,SMARCD2,TCAM1P	NA	NA	NA	NA	SMARCD2	2566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	62159440	62159790	62159613	Y	MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,CEP95,ERN1	ERN1	NA	NA	NA	NA	ERN1	46389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr17	62161129	62161576	62161448	Y	MAP3K3,LIMD2,ICAM2,PECAM1,DDX5,ERN1	ERN1	NA	NA	NA	NA	ERN1	44603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	62310016	62310373	62310195	Y	C17orf72	TEX2	NA	NA	NA	NA	TEX2	28288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	62339620	62339793	62339707	Y	CEP95	TEX2	NA	NA	NA	NA	TEX2	959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	62403904	62404562	62404234	Y	ERN1,PECAM1,DDX5	NA	NA	NA	NA	NA	TEX2	65243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr17	62484790	62485162	62485096	Y	NA	POLG2,MIR3064,CEP95,DDX5	NA	NA	NA	NA	POLG2	5992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	62487438	62487665	62487534	Y	ICAM2	POLG2,MIR3064,CEP95,DDX5	NA	NA	NA	NA	POLG2	3489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	62612826	62613207	62613064	Y	NA	SMURF2	NA	NA	NA	NA	SMURF2	42979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	62705157	62705447	62705234	Y	SMURF2	SMURF2	SMURF2	IMR90	Hi-C	24141950	SMURF2	48971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr17	62773066	62773435	62773116	Y	NA	NA	NA	NA	NA	NA	PLEKHM1P	57837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	62958497	62958860	62958615	Y	NA	LRRC37A3,AMZ2P1	NA	NA	NA	NA	AMZ2P1	10834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	63038886	63039290	63039133	Y	GNA13	GNA13	NA	NA	NA	NA	GNA13	11667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	63043139	63043174	63043152	Y	NA	GNA13	NA	NA	NA	NA	GNA13	7783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	63053851	63054126	63053975	Y	GNA13	GNA13	AMZ2P1	IMR90	Hi-C	24141950	GNA13	2894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	63060882	63060952	63060917	Y	GNA13	GNA13	GNA13,RGS9	IMR90	Hi-C	24141950	GNA13	9925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	63119249	63119621	63119552	Y	GNA13	NA	RGS9,GNA13,AMZ2P1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	GNA13	68292	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.506200334549011
chr17	63550809	63551200	63551034	Y	NA	AXIN2	NA	NA	NA	NA	AXIN2	4565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	63552177	63552345	63552261	Y	NA	AXIN2	NA	NA	NA	NA	AXIN2	3420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	63569009	63569274	63569155	Y	NA	AXIN2	NA	NA	NA	NA	AXIN2	13244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr17	63639930	63640399	63640359	Y	NA	NA	NA	NA	NA	NA	AXIN2	84165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.677950648645356
chr17	63747410	63747660	63747535	Y	CEP112,CEP112,AXIN2	NA	NA	NA	NA	NA	AXIN2	191645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	63752923	63753189	63753062	Y	NA	NA	NA	NA	NA	NA	AXIN2	197158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr17	63996608	63996849	63996729	Y	NA	NA	NA	NA	NA	NA	CEP112	189353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	64194072	64194322	64194164	Y	NA	CEP112	NA	NA	NA	NA	CEP112	7870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.786744699795352
chr17	64207206	64207303	64207255	Y	NA	CEP112,APOH	NA	NA	NA	NA	CEP112	21004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	64301184	64301397	64301241	Y	NA	PRKCA	NA	NA	NA	NA	PRKCA	4430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	64455929	64456369	64456061	Y	NA	NA	NA	NA	NA	NA	PRKCA	159175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr17	64463185	64463416	64463350	Y	NA	NA	NA	NA	NA	NA	PRKCA	166431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	64499082	64499411	64499095	Y	NA	NA	NA	NA	NA	NA	PRKCA	202328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	64544411	64544774	64544437	Y	NA	NA	NA	NA	NA	NA	PRKCA	247657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	64544919	64545280	64544935	Y	NA	NA	NA	NA	NA	NA	PRKCA	248165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	64551659	64552047	64551761	Y	NA	NA	NA	NA	NA	NA	PRKCA	254905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	64695504	64695853	64695677	Y	NA	NA	NA	NA	NA	NA	CACNG4	263173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	64947420	64948018	64947947	Y	NA	CACNG4	CACNG5,CACNG4,CACNG1,HELZ,PRKCA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CACNG4	11008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	64948296	64948612	64948339	Y	CACNG4	CACNG4	CACNG5,CACNG4,CACNG1,HELZ,PRKCA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CACNG4	10414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	65220181	65220399	65220279	Y	NA	HELZ,SNORA8	NA	NA	NA	NA	HELZ	19706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	65242250	65242562	65242536	Y	NA	HELZ,SNORA8	NA	NA	NA	NA	HELZ	2145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.237815408606697
chr17	65243162	65243488	65243335	Y	PITPNC1,HELZ	HELZ,SNORA8	NA	NA	NA	NA	HELZ	3057	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.75017608324975
chr17	65339190	65339485	65339338	Y	BPTF	PSMD12,PITPNC1	NA	NA	NA	NA	PSMD12	21258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	65394789	65395150	65395019	Y	HELZ,BPTF,PITPNC1	PSMD12,PITPNC1	NOL11	IMR90	Hi-C	24141950	PITPNC1	23214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	65611157	65611527	65611357	Y	NA	NA	NA	NA	NA	NA	NOL11	100422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	65847253	65847408	65847335	Y	NA	BPTF	NA	NA	NA	NA	BPTF	27613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	66016045	66016315	66016119	Y	NA	C17orf58,KPNA2	BPTF,C17orf58,KPNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KPNA2	13320	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.40010462083998
chr17	66016382	66016768	66016696	Y	NA	C17orf58,KPNA2	BPTF,C17orf58,KPNA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KPNA2	12867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	66030294	66030564	66030453	Y	NA	C17orf58,KPNA2	NA	NA	NA	NA	KPNA2	659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr17	66041204	66041633	66041268	Y	NA	KPNA2	NA	NA	NA	NA	KPNA2	11569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	66308597	66309089	66308898	Y	BPTF,PRKAR1A,PRKAR1A,SLC16A6	SLC16A6	NA	NA	NA	NA	SLC16A6	23189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	66314385	66314893	66314731	Y	BPTF,SLC16A6	SLC16A6	NA	NA	NA	NA	SLC16A6	28977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	66322964	66323100	66323038	Y	SLC16A6	SLC16A6	NA	NA	NA	NA	SLC16A6	37556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	66340875	66341269	66341006	Y	AMZ2,SLC16A6,PRKAR1A,PRKAR1A	NA	NA	NA	NA	NA	SLC16A6	55467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	66348483	66348670	66348577	Y	PRKAR1A	NA	NA	NA	NA	NA	SLC16A6	63075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	66374219	66374806	66374507	Y	SLC16A6	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	76848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.809097585321514
chr17	66374808	66375131	66375016	Y	SLC16A6	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	76523	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.47397585303674
chr17	66379549	66379922	66379702	Y	SLC16A6,WIPI1	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	71732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.343820823682216
chr17	66380161	66380700	66380381	Y	SLC16A6	NA	NA	NA	NA	NA	WIPI1	70954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	66382740	66382853	66382787	Y	NA	NA	WIPI1	IMR90	Hi-C	24141950	WIPI1	68801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	66434083	66434422	66434387	Y	NA	WIPI1	NA	NA	NA	NA	WIPI1	17232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	66452519	66452682	66452605	Y	SLC16A6,WIPI1	WIPI1	NA	NA	NA	NA	WIPI1	865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	66509186	66509763	66509535	Y	SLC16A6,PRKAR1A,PRKAR1A	PRKAR1A	NA	NA	NA	NA	PRKAR1A	3265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr17	66576283	66577056	66576544	Y	FAM20A	FAM20A	NA	NA	NA	NA	FAM20A	18474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	66595732	66596064	66595787	Y	NA	FAM20A	NA	NA	NA	NA	FAM20A	202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr17	66607533	66607779	66607649	Y	NA	FAM20A	NA	NA	NA	NA	FAM20A	12003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	66817214	66817283	66817253	Y	NA	NA	ABCA8	IMR90	Hi-C	24141950	ABCA8	132250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.668579845415807
chr17	66818173	66818316	66818245	Y	NA	NA	ABCA8	IMR90	Hi-C	24141950	ABCA8	131217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr17	67315191	67315526	67315500	Y	NA	ABCA5	NA	NA	NA	NA	ABCA5	5859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	67603336	67603572	67603425	Y	NA	NA	KCNJ16,KCNJ2,KCNJ2-AS1	IMR90	Hi-C	24141950	MAP2K6	194497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	68943933	68944102	68944047	Y	NA	NA	NA	NA	NA	NA	LOC124685	671017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	69617489	69617539	69617508	Y	NA	LOC124685	LOC100499467	IMR90	Hi-C	24141950	LOC124685	2370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	70113355	70113523	70113439	Y	NA	SOX9	NA	NA	NA	NA	SOX9	1638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70122851	70122907	70122879	Y	NA	SOX9	NA	NA	NA	NA	SOX9	7690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70147771	70147892	70147832	Y	NA	SOX9	SOX9,LOC100499467	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SOX9	32610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70335121	70335458	70335290	Y	NA	NA	LOC100499467,SOX9	IMR90	Hi-C	24141950	SOX9	219960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.519513945273133
chr17	70395717	70396043	70395724	Y	NA	NA	NA	NA	NA	NA	RPL32P33	225327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr17	70403681	70403886	70403813	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	217484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	70412502	70412837	70412669	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	208533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	70417215	70417683	70417549	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	203687	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.14551576520977
chr17	70421948	70422074	70421986	Y	NA	NA	NA	NA	NA	NA	RPL32P33	199296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	70442621	70442708	70442666	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	178662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr17	70443498	70443728	70443613	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	177642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280544365246341
chr17	70461830	70461987	70461862	Y	NA	NA	NA	NA	NA	NA	RPL32P33	159383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70462396	70462597	70462589	Y	NA	NA	NA	NA	NA	NA	RPL32P33	158773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	70464411	70464702	70464656	Y	NA	NA	NA	NA	NA	NA	RPL32P33	156668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	70484276	70484648	70484400	Y	NA	NA	NA	NA	NA	NA	RPL32P33	136722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	70497980	70498445	70498203	Y	SOX9	NA	NA	NA	NA	NA	RPL32P33	122925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.423039431171927
chr17	70512872	70513243	70513164	Y	NA	NA	NA	NA	NA	NA	RPL32P33	108127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	70514986	70515384	70515137	Y	NA	NA	NA	NA	NA	NA	RPL32P33	105986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr17	70577972	70578326	70578149	Y	NA	RPL32P33	NA	NA	NA	NA	RPL32P33	43044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70585200	70585480	70585419	Y	NA	RPL32P33,LINC00511	NA	NA	NA	NA	RPL32P33	35890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	70585924	70586379	70586141	Y	NA	RPL32P33,LINC00511	NA	NA	NA	NA	RPL32P33	34991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	70587266	70587776	70587444	Y	NA	RPL32P33,LINC00511	NA	NA	NA	NA	RPL32P33	33594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr17	70628447	70628581	70628499	Y	NA	RPL32P33,LINC00511	NA	NA	NA	NA	LINC00511	6030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.383430127427072
chr17	70664433	70664574	70664507	Y	NA	RPL32P33,LINC00511	NA	NA	NA	NA	LINC00511	29822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	70680022	70680249	70680147	Y	NA	LINC00511	NA	NA	NA	NA	LINC00511	45411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr17	70706379	70706638	70706553	Y	NA	NA	NA	NA	NA	NA	LINC00511	71768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	70712408	70712674	70712489	Y	NA	NA	NA	NA	NA	NA	LINC00511	77797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr17	70779461	70779663	70779556	Y	CPSF4L	NA	NA	NA	NA	NA	LINC00511	144850	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.32729726142979
chr17	71024945	71025268	71025108	Y	NA	NA	NA	NA	NA	NA	SLC39A11	61583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	71064440	71064923	71064668	Y	CPSF4L	SLC39A11	NA	NA	NA	NA	SLC39A11	21928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr17	71085897	71086274	71086125	Y	SLC39A11	SLC39A11	NA	NA	NA	NA	SLC39A11	577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr17	71200352	71200549	71200451	Y	NA	SSTR2,COG1,C17orf80,FAM104A	NA	NA	NA	NA	COG1	13223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr17	71227425	71227646	71227536	Y	NA	COG1,C17orf80,FAM104A	NA	NA	NA	NA	C17orf80	1053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	71304431	71304616	71304518	Y	NA	CDC42EP4	NA	NA	NA	NA	CDC42EP4	1698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	71305759	71306422	71306099	Y	NA	NA	NA	NA	NA	NA	CDC42EP4	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr17	71338137	71338558	71338458	Y	NA	CDC42EP4	NA	NA	NA	NA	CDC42EP4	31823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	72426026	72426159	72426078	Y	DNAI2,GPRC5C	GPRC5C	NA	NA	NA	NA	GPRC5C	7036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.422216276572143
chr17	72453815	72453911	72453863	Y	TTYH2,TTYH2,RAB37,GRIN2C,GPRC5C	GPRC5C	NA	NA	NA	NA	GPRC5C	34825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	72532761	72533135	72532770	Y	TTYH2,TTYH2,CD300A,TMEM104,CD300LF,CD300E,CD300LB,CD300LD,CD300C	CD300C	NA	NA	NA	NA	CD300C	7147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	72745955	72746124	72746086	Y	NA	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	3164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	72746451	72746964	72746655	Y	NA	SLC9A3R1,NAT9,TMEM104	NA	NA	NA	NA	SLC9A3R1	3660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr17	72865540	72865567	72865553	Y	NA	FDXR,FADS6	NA	NA	NA	NA	FDXR	1589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	72978355	72978661	72978434	Y	KIAA0195,RAB37,GRIN2C,KCTD2,FADS6,C17orf28,CDR2L	CDR2L,ICT1,KCTD2	CDR2L,ICT1,C17orf28,HN1	MCF7,K562	ChIA-PET	22265404	CDR2L	3066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.348586274169372
chr17	72984795	72985307	72985001	Y	RAB37,CDR2L	CDR2L,ICT1,KCTD2	NA	NA	NA	NA	CDR2L	3068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	73007152	73007476	73007237	Y	RAB37,GRIN2C,C17orf28,CDR2L,SUMO2,NUP85,KCTD2,ARMC7	CDR2L,ICT1,KCTD2,ATP5H	NA	NA	NA	NA	ICT1	387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	73009835	73009966	73009891	Y	NA	CDR2L,ICT1,KCTD2,ATP5H	NA	NA	NA	NA	ICT1	3070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr17	73074678	73074996	73074848	Y	LLGL2,C17orf28,ARMC7	KCTD2,ATP5H,SLC16A5,ARMC7	NA	NA	NA	NA	SLC16A5	6826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	73087456	73087829	73087515	Y	NA	ATP5H,SLC16A5,ARMC7,NT5C	NA	NA	NA	NA	SLC16A5	5634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	73304838	73305233	73305159	Y	UNK,SAP30BP,H3F3B,GRB2,GRB2,SLC16A5,GGA3,SLC25A19	MRPS7,GGA3,MIF4GD,SLC25A19,AC011933.1	NA	NA	NA	NA	AC011933.1	8177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.522965126595432
chr17	73319762	73319905	73319788	Y	SAP30BP,H3F3B,GRB2,GRB2,SLC16A5,GGA3,SLC25A19	SLC25A19,AC011933.1	NA	NA	NA	NA	AC011933.1	6352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	73333353	73333637	73333600	Y	H3F3B,GRB2,GRB2,GGA3	SLC25A19,AC011933.1	NA	NA	NA	NA	AC011933.1	19943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	73426423	73426691	73426652	Y	MRPS7	GRB2,KIAA0195	NA	NA	NA	NA	KIAA0195	8549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr17	73545364	73545732	73545559	Y	NA	CASKIN2,TSEN54,LLGL2	NA	NA	NA	NA	LLGL2	26203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr17	73546030	73546166	73546084	Y	NA	CASKIN2,TSEN54,LLGL2	NA	NA	NA	NA	LLGL2	26869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	73641652	73641951	73641723	Y	CASKIN2,LLGL2,FOXJ1,EVPL,LOC100130933	SAP30BP,RECQL5	NA	NA	NA	NA	SAP30BP	19245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	73696530	73696897	73696707	Y	SAP30BP,ITGB4,ITGB4	SAP30BP,RECQL5,ITGB4	NA	NA	NA	NA	ITGB4	18511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	73805010	73805399	73805102	Y	NA	GALK1,UNK,H3F3B,UNC13D,WBP2	NA	NA	NA	NA	H3F3B	25036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	73850621	73850811	73850693	Y	GRB2,GRB2,SAP30BP,H3F3B,FAM100B,EVPL,ACOX1,UNC13D,WBP2,TRIM47	UNC13D,WBP2,TRIM47,TRIM65	NA	NA	NA	NA	WBP2	33	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	73868951	73869202	73869040	Y	TRIM47	UNC13D,WBP2,TRIM47,TRIM65,MRPL38	NA	NA	NA	NA	TRIM47	3454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.292052080633333
chr17	73891396	73891618	73891569	Y	NA	WBP2,TRIM47,TRIM65,MRPL38,FBF1	NA	NA	NA	NA	TRIM65	312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314073949339183
chr17	73992927	73993207	73992957	Y	NA	TEN1,ACOX1,CDK3,EVPL	NA	NA	NA	NA	CDK3	1780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr17	74067493	74067877	74067630	Y	RNF157,FAM100B	EVPL,SRP68,GALR2,EXOC7	NA	NA	NA	NA	SRP68	759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	74117633	74117738	74117682	Y	NA	GALR2,EXOC7,FOXJ1	NA	NA	NA	NA	EXOC7	1976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	74128444	74128992	74128680	Y	LOC100130933,RECQL5,RECQL5,FOXJ1	EXOC7,FOXJ1	NA	NA	NA	NA	FOXJ1	6388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.248991595566178
chr17	74134600	74134832	74134764	Y	LOC100130933,RECQL5,RECQL5,PRPSAP1,ZACN,FOXJ1	EXOC7,FOXJ1	NA	NA	NA	NA	FOXJ1	548	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.97204934280262
chr17	74233896	74234348	74234226	Y	NA	ATF4P3,RNF157	NA	NA	NA	NA	RNF157	106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	74248222	74248574	74248373	Y	ST6GALNAC2,RHBDF2,RHBDF2,JMJD6,H3F3B,UNC13D,WBP2,ACOX1,SPHK1,FAM100B	ATF4P3,RNF157	RNF157	MCF7	ChIA-PET	22265404	RNF157	13768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	74255513	74255743	74255629	Y	NA	ATF4P3,RNF157	NA	NA	NA	NA	RNF157	21059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.248168952573594
chr17	74341579	74341976	74341749	Y	NA	SPHK1,PRPSAP1	NA	NA	NA	NA	SPHK1	28689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.181772841242931
chr17	74373540	74373784	74373662	Y	RHBDF2,RHBDF2,JMJD6,TEN1,QRICH2,SPHK1,SPHK1	SPHK1,PRPSAP1	NA	NA	NA	NA	SPHK1	2875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr17	74415585	74415933	74415760	Y	MFSD11,RNF157	SPHK1,PRPSAP1,UBE2O	NA	NA	NA	NA	UBE2O	31355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	74440987	74441354	74441087	Y	NA	UBE2O	NA	NA	NA	NA	UBE2O	5934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	74444372	74444742	74444506	Y	NA	UBE2O	NA	NA	NA	NA	UBE2O	2546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	74496600	74496786	74496748	Y	NA	UBE2O,RHBDF2	NA	NA	NA	NA	RHBDF2	728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr17	74525125	74525268	74525197	Y	NA	RHBDF2	NA	NA	NA	NA	RHBDF2	29253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	74525744	74526079	74526045	Y	ST6GALNAC2,MGAT5B,CYGB	RHBDF2	NA	NA	NA	NA	RHBDF2	29872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	74526422	74526750	74526585	Y	CYGB	RHBDF2	NA	NA	NA	NA	RHBDF2	30550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	74692944	74693312	74693210	Y	NA	MXRA7,JMJD6,METTL23,MFSD11,SRSF2	NA	NA	NA	NA	MXRA7	11786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	74696685	74696955	74696820	Y	NA	MXRA7,JMJD6,METTL23,MFSD11,SRSF2	NA	NA	NA	NA	MXRA7	8143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr17	75086431	75086552	75086490	Y	NA	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	5633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	75096190	75096538	75096428	Y	JMJD6,SEC14L1,SEC14L1,SEC14L1,SEC14L1	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	15392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	75103651	75103906	75103737	Y	JMJD6,SRSF2	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	22853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	75112462	75112730	75112694	Y	SEC14L1,SEC14L1	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	31664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr17	75118026	75118235	75118074	Y	NA	LINC00338,SEC14L1	NA	NA	NA	NA	LINC00338,SEC14L1	37228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	75167597	75167895	75167730	Y	NA	NA	NA	NA	NA	NA	LINC00338,SEC14L1	86799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	75170939	75171192	75170955	Y	NA	NA	NA	NA	NA	NA	LINC00338,SEC14L1	90141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	75199050	75199385	75199187	Y	NA	NA	NA	NA	NA	NA	SEPT9	75266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	75251434	75251777	75251766	Y	NA	SEPT9	SEPT9,SRSF2,METTL23,MFSD11,SEC14L1,MGAT5B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SEPT9	22874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	75278845	75279720	75279369	Y	NA	SEPT9	NA	NA	NA	NA	SEPT9	4194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr17	75281264	75281453	75281354	Y	SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	6613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	75281811	75282557	75281917	Y	SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	7160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.23650113944184
chr17	75282703	75283463	75282995	Y	SEPT9,SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	8052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chr17	75284936	75285118	75285041	Y	NA	SEPT9	NA	NA	NA	NA	SEPT9	10285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr17	75312591	75312808	75312697	Y	NA	SEPT9	NA	NA	NA	NA	SEPT9	37940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	75319028	75319523	75319372	Y	SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	44377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	75319670	75320031	75319742	Y	MGAT5B,SEPT9,SEPT9	SEPT9	NA	NA	NA	NA	SEPT9	45019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	75359988	75360125	75360083	Y	NA	NA	NA	NA	NA	NA	SEPT9	85337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	75384636	75384998	75384811	Y	NA	NA	NA	NA	NA	NA	SEPT9	109985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.161065241701938
chr17	75387909	75388384	75388205	Y	SEPT9,SEPT9	NA	NA	NA	NA	NA	SEPT9	113258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	75388510	75388802	75388677	Y	NA	NA	NA	NA	NA	NA	SEPT9	113859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.946004046160161
chr17	75402047	75402301	75402134	Y	NA	NA	NA	NA	NA	NA	SEPT9	127396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	75405377	75405733	75405639	Y	NA	NA	NA	NA	NA	NA	SEPT9	130726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	75450694	75450827	75450755	Y	NA	NA	NA	NA	NA	NA	SEPT9	176043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr17	75451587	75451956	75451821	Y	NA	NA	NA	NA	NA	NA	SEPT9	176936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr17	75456086	75456409	75456172	Y	NA	NA	NA	NA	NA	NA	SEPT9	181435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	75461802	75462176	75461947	Y	SEC14L1,SEC14L1	NA	NA	NA	NA	NA	SEPT9	187151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	75504499	75504824	75504660	Y	NA	NA	NA	NA	NA	NA	SEPT9	229848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	75953939	75954304	75954190	Y	TMEM235,TMC8,TMC6,TMC6,SOCS3,PGS1,TNRC6C	RNU1-80P	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNU1-80P	39759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	75954393	75954796	75954614	Y	NA	RNU1-80P	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNU1-80P	40213	CAGE	HepG2 ENCODE	hg19	FANTOM5	15.4629632304896
chr17	75955923	75956319	75956134	Y	TMC8,TMC6,TMC6,TNRC6C	RNU1-80P	TNRC6C,LOC100507351	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RNU1-80P	41743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	76195016	76195360	76195224	Y	TMC6,TMC8,SOCS3,PGS1	SYNGR2,TK1,AFMID,BIRC5	BIRC5	IMR90	Hi-C	24141950	BIRC5	12907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr17	76233617	76233864	76233741	Y	TNRC6C,TMEM235	BIRC5	NA	NA	NA	NA	BIRC5	25350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	76237561	76237918	76237683	Y	TMEM235	BIRC5	NA	NA	NA	NA	BIRC5	29294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	76310071	76310633	76310436	Y	CYTH1,SOCS3,PGS1	SOCS3	PGS1,DNAH17,SOCS3	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SOCS3	43525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	76348964	76349371	76349046	Y	USP36,CYTH1,TMC6,TMC8,SOCS3,PGS1	SOCS3,PGS1	NA	NA	NA	NA	SOCS3	4787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	76371473	76371684	76371583	Y	SOCS3,PGS1	SOCS3,PGS1	SOCS3	K562	ChIA-PET	22265404	PGS1	1037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	76564130	76564337	76564280	Y	SOCS3,PGS1,USP36,CYTH1	NA	NA	NA	NA	NA	PGS1	191409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	76588219	76588768	76588537	Y	NA	NA	DNAH17,CYTH1,USP36	IMR90	Hi-C	24141950	CYTH1	187611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	76592779	76593067	76592910	Y	SOCS3,PGS1,USP36,ENGASE,CYTH1,CANT1	NA	DNAH17,CYTH1,PGS1,USP36	IMR90	Hi-C	24141950	CYTH1	183312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	76643240	76643420	76643373	Y	SOCS3,PGS1,USP36,ENGASE,CYTH1	NA	DNAH17,CYTH1	IMR90	Hi-C	24141950	CYTH1	132959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	76662391	76662551	76662479	Y	SOCS3,PGS1,USP36,ENGASE,CYTH1	NA	NA	NA	NA	NA	CYTH1	113828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr17	76731686	76732147	76732043	Y	SOCS3,PGS1,USP36,ENGASE,CYTH1	CYTH1	NA	NA	NA	NA	CYTH1	44232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	76871917	76872130	76872058	Y	PGS1,CYTH1,CANT1	USP36,TIMP2	NA	NA	NA	NA	USP36	36394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	76879007	76879631	76879400	Y	CYTH1,ENGASE,CANT1,USP36	USP36,TIMP2	NA	NA	NA	NA	TIMP2	39838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr17	76879876	76880180	76879977	Y	NA	USP36,TIMP2	NA	NA	NA	NA	TIMP2	39289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr17	76929562	76929807	76929665	Y	CANT1	TIMP2,LGALS3BP	TIMP2	MCF7	ChIA-PET	22265404	TIMP2	10093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr17	76930060	76930674	76930419	Y	NA	TIMP2,LGALS3BP	TIMP2	MCF7	ChIA-PET	22265404	TIMP2	10591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	77022886	77023125	77023007	Y	C1QTNF1	LGALS3BP,CANT1,C1QTNF1,ENGASE	NA	NA	NA	NA	C1QTNF1	5990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.353191626911766
chr17	77025234	77025427	77025328	Y	NA	CANT1,C1QTNF1,ENGASE	NA	NA	NA	NA	C1QTNF1	8338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	77481345	77481685	77481515	Y	NA	NA	NA	NA	NA	NA	ENPP7	220996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr17	77702456	77702572	77702532	Y	NA	ENPP7,CBX2	NA	NA	NA	NA	ENPP7	109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	77776510	77776898	77776679	Y	CCDC40	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	3028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	77778056	77778248	77778123	Y	CBX2,CBX8	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	4574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr17	77783959	77784243	77784073	Y	CBX2,CBX8	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	10477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.298131800285346
chr17	77784894	77785612	77785337	Y	NA	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	11412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr17	77787297	77787609	77787349	Y	NA	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	13815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.161065241701938
chr17	77788517	77788922	77788877	Y	NA	CBX2,CBX8,CBX4	NA	NA	NA	NA	CBX8	15035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	77816646	77816987	77816930	Y	NA	CBX8,CBX4	NA	NA	NA	NA	CBX4	5418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	77817686	77818105	77817998	Y	NA	CBX8,CBX4	NA	NA	NA	NA	CBX4	6458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr17	77916649	77916884	77916753	Y	NA	NA	NA	NA	NA	NA	TBC1D16	90763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	77952311	77952542	77952488	Y	NA	NA	NA	NA	NA	NA	TBC1D16	55105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	77959820	77960211	77960016	Y	NA	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	47436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr17	77961931	77962339	77962251	Y	NA	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	45308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.551397731773607
chr17	77965696	77966573	77966281	Y	CBX2,CBX8,CBX4,CCDC40	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	41074	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.0157615517868
chr17	77967532	77967765	77967641	Y	CBX8,CBX4,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	39882	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.83348842939452
chr17	77970749	77971301	77971166	Y	CBX4,SGSH,RNF213,GAA,EIF4A3	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	36346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	77979653	77979899	77979776	Y	NA	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	27748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	77990350	77990422	77990386	Y	NA	TBC1D16,CCDC40	NA	NA	NA	NA	TBC1D16	17225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr17	78008584	78008924	78008651	Y	TBC1D16,GAA	TBC1D16,CCDC40	NA	NA	NA	NA	CCDC40	149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	78087852	78088239	78088062	Y	NA	GAA,EIF4A3	NA	NA	NA	NA	GAA	14497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	78098181	78098723	78098426	Y	NA	GAA,EIF4A3	NA	NA	NA	NA	EIF4A3	20259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr17	78121490	78121818	78121740	Y	NA	GAA,EIF4A3	NA	NA	NA	NA	EIF4A3	2508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr17	78228476	78228940	78228764	Y	GAA,EIF4A3,SGSH,RNF213	SLC26A11,SGSH,RNF213	NA	NA	NA	NA	RNF213	3725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	78352228	78352499	78352367	Y	GAA,RNF213	ENDOV	NA	NA	NA	NA	ENDOV	34466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	78428203	78429274	78428566	Y	NA	ENDOV,NPTX1	NA	NA	NA	NA	NPTX1	20369	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.49261633953154
chr17	78471918	78472124	78472096	Y	NA	NPTX1,RPL32P31,RPTOR	RPTOR,ENDOV,LOC100294362,CHMP6	IMR90	Hi-C	24141950	NPTX1	22275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	78524165	78524352	78524226	Y	NA	RPL32P31,RPTOR	NA	NA	NA	NA	RPTOR	7546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	78652497	78652856	78652573	Y	SGSH,RNF213	NA	NA	NA	NA	NA	RPTOR	135878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	78669175	78669353	78669258	Y	NA	NA	NA	NA	NA	NA	RPTOR	152556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	78724836	78725014	78724914	Y	NA	NA	NA	NA	NA	NA	RPTOR	208217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	78810006	78810317	78810174	Y	NA	NA	NA	NA	NA	NA	CHMP6	153081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	78853513	78853762	78853623	Y	NA	NA	NA	NA	NA	NA	CHMP6	109636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	78962835	78962976	78962910	Y	NA	CHMP6,BAIAP2	NA	NA	NA	NA	CHMP6	422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	79017666	79018027	79017910	Y	AZI1,BAIAP2	BAIAP2	NA	NA	NA	NA	BAIAP2	10718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.535947208892044
chr17	79056542	79056873	79056681	Y	NA	BAIAP2	NA	NA	NA	NA	BAIAP2	49594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	79064673	79065032	79064884	Y	BAIAP2,TMEM105	NA	NA	NA	NA	NA	BAIAP2	57725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79068878	79069252	79068906	Y	C17orf56	NA	NA	NA	NA	NA	BAIAP2	61930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	79107096	79107396	79107264	Y	AATK	AATK	NA	NA	NA	NA	AATK	30481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.301582981607645
chr17	79123029	79123440	79123130	Y	NA	AATK	NA	NA	NA	NA	AATK	14437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79126074	79126501	79126440	Y	C17orf56	AATK	NA	NA	NA	NA	AATK	11376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79228717	79229006	79228862	Y	NA	AZI1,C17orf89,SLC38A10	NA	NA	NA	NA	C17orf89	17678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	79313114	79313481	79313281	Y	NA	SLC38A10,LINC00482,TMEM105	SLC38A10,LINC00482,TMEM105,MIR4740,BAHCC1,C17orf70,FSCN2,ACTG1	IMR90	Hi-C	24141950	TMEM105	10640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr17	79316253	79317268	79317090	Y	NA	SLC38A10,LINC00482,TMEM105	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,C17orf56,C17orf89,LINC00482,MIR3186,C17orf70,FSCN2,NPLOC4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM105	13779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr17	79317785	79317948	79317891	Y	FAM195B,C17orf70,ACTG1,BAHCC1	LINC00482,TMEM105	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM105	15311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr17	79318144	79318304	79318226	Y	TMEM105,BAHCC1	LINC00482,TMEM105	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM105	15670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr17	79319325	79319648	79319507	Y	FAM195B,CHMP6,C17orf89,SLC38A10,MRPL12,HGS,C17orf90,C17orf70,ACTG1	LINC00482,TMEM105	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM105	16851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.486807004172875
chr17	79319812	79320225	79320116	Y	FAM195B,DYSFIP1,AATK,AZI1,TSPAN10,C17orf70,BAHCC1	LINC00482,TMEM105	BAHCC1,SLC38A10,TMEM105,ACTG1,MIR4740,NPLOC4,LINC00482,MIR3186,FSCN2,C17orf70	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TMEM105	17338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.481549927513446
chr17	79358751	79359583	79359338	Y	NA	NA	NA	NA	NA	NA	TMEM105	56277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr17	79360408	79361324	79361141	Y	ARHGDIA,ARHGDIA,TSPAN10	NA	NA	NA	NA	NA	TMEM105	57934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr17	79362745	79363068	79363048	Y	NA	NA	NA	NA	NA	NA	TMEM105	60271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	79365060	79367456	79365203	Y	NA	NA	NA	NA	NA	NA	TMEM105	62586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr17	79368790	79369424	79369000	Y	NA	NA	NA	NA	NA	NA	TMEM105	66316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr17	79369574	79370687	79370597	Y	NA	NA	NA	NA	NA	NA	TMEM105	67100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr17	79370754	79371569	79371407	Y	NA	NA	NA	NA	NA	NA	TMEM105	68280	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.16663385887381
chr17	79375864	79375954	79375909	Y	DYSFIP1,BAHCC1	NA	NA	NA	NA	NA	TMEM105	73390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79399158	79399431	79399295	Y	NA	NA	NA	NA	NA	NA	RP13-766D20.1	78658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79399639	79399699	79399664	Y	GCGR,BAHCC1	NA	NA	NA	NA	NA	RP13-766D20.1	78390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	79439092	79439387	79439261	Y	PCYT2,FAM195B,C17orf90,C17orf70,ACTG1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	38702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr17	79448388	79448678	79448571	Y	NPB,AATK,AZI1,BAHCC1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	29411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	79451287	79451558	79451462	Y	AATK,AZI1,BAHCC1	RP13-766D20.1,ACTG1	NA	NA	NA	NA	RP13-766D20.1	26531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr17	79546845	79547000	79546944	Y	PCYT2	C17orf70	NA	NA	NA	NA	C17orf70	27858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	79886802	79887109	79886903	Y	NA	ANAPC11,ALYREF,NPB,PCYT2,SIRT7,MAFG,MAFG-AS1,PYCR1,NOTUM,ASPSCR1	NA	NA	NA	NA	MAFG-AS1	3097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr17	79925685	79926075	79926048	Y	TSPAN10	SIRT7,MAFG,MAFG-AS1,PYCR1,NOTUM,ASPSCR1	ASPSCR1	K562,MCF7	ChIA-PET	22265404	ASPSCR1	6608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.630284810835808
chr17	79942701	79942868	79942785	Y	SLC16A3,NARF,CCDC57,C17orf62,C17orf62	PYCR1,NOTUM,ASPSCR1,LRRC45,STRA13,RAC3	NA	NA	NA	NA	ASPSCR1	10018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr17	79949658	79950000	79949804	Y	SLC25A10,STRA13,LRRC45,FASN,DCXR,PCYT2,NOTUM,ASPSCR1	NOTUM,ASPSCR1,LRRC45,STRA13,RAC3,DCXR	NA	NA	NA	NA	ASPSCR1	16975	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.73906969540152
chr17	79950743	79950987	79950865	Y	SLC25A10,GCGR,DCXR,PCYT2	NOTUM,ASPSCR1,LRRC45,STRA13,RAC3,DCXR	NA	NA	NA	NA	ASPSCR1	18060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.686658906627085
chr17	79958827	79959194	79958989	Y	NA	NOTUM,ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG	NA	NA	NA	NA	LRRC45	19984	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.21472050052998
chr17	79979263	79979824	79979465	Y	NA	ASPSCR1,LRRC45,STRA13,RAC3,DCXR,GPS1,RFNG,DUS1L	NA	NA	NA	NA	LRRC45	85	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	80052713	80052821	80052782	Y	MRPL12,SLC25A10,GCGR,PCYT2,ASPSCR1,HEXDC,FOXK2,LRRC45,DCXR,DUS1L,FASN	GPS1,RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	1387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.765054359517013
chr17	80056613	80056910	80056718	Y	C17orf90,CCDC137,HGS,MRPL12,SLC25A10,FAM195B,THOC4,ANAPC11,ANAPC11,PCYT2,SIRT7,ASPSCR1,NARF,HEXDC,FOXK2,CCDC57,C17orf62,C17orf101,STRA13,LRRC45,RAC3,GPS1,DUS1L,FASN	RFNG,DUS1L,FASN	NA	NA	NA	NA	FASN	2405	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.81886971608982
chr17	80060759	80061000	80060880	Y	NA	DUS1L,FASN	NA	NA	NA	NA	FASN	6551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.362722527886078
chr17	80068190	80068440	80068326	Y	NA	DUS1L,FASN	NA	NA	NA	NA	FASN	13982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	80183373	80183743	80183482	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	SLC16A3	530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr17	80184723	80185021	80184926	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	SLC16A3	450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr17	80188750	80189250	80189000	Y	NARF,CSNK1D,C17orf62,SLC16A3,SLC16A3,SLC16A3,SLC16A3,SLC16A3	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	SLC16A3	4477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.33905537319506
chr17	80215337	80215590	80215470	Y	SIRT7,WDR45L,NARF,CSNK1D,CD7,C17orf62,C17orf62,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	14017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	80216124	80216440	80216314	Y	NA	CCDC57,SLC16A3,CSNK1D	NA	NA	NA	NA	CSNK1D	13167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	80245965	80246238	80246057	Y	MAFG,MAFG,SLC16A3,CSNK1D,SECTM1	CSNK1D,CD7,SECTM1	CSNK1D,SLC16A3,CCDC57,TEX19,C17orf101,SECTM1,HEXDC	IMR90	Hi-C	24141950	CSNK1D	16358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr17	80255299	80255755	80255478	Y	SIRT7,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D,CD7,SECTM1	NA	NA	NA	NA	CD7	17723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr17	80255798	80256475	80256187	Y	SIRT7,MAFG,MAFG,CCDC57,SLC16A3,SLC16A3,SLC16A3,SLC16A3,NARF,NARF,HEXDC,C17orf62,C17orf62,CSNK1D,SECTM1,CD7	CSNK1D,CD7,SECTM1	NA	NA	NA	NA	CD7	17003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr17	80292742	80293207	80293087	Y	MAFG,MAFG,SLC16A3,SLC16A3,CSNK1D,SECTM1	CD7,SECTM1,TEX19	NA	NA	NA	NA	SECTM1	2792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr17	80296831	80297318	80297085	Y	NA	CD7,SECTM1,TEX19	SECTM1,CCDC57,SLC16A3,CSNK1D,CD7,TEX19,C17orf62,C17orf101,NARF,HEXDC,FOXK2,WDR45L	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	SECTM1	6881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.688955916529289
chr17	80328282	80328672	80328333	Y	NA	SECTM1,TEX19,HEXDC	NA	NA	NA	NA	TEX19	13159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	80453708	80453979	80453866	Y	LRRC45,DUS1L,FASN,UTS2R,TBCD,FOXK2	C17orf62,NARF,FOXK2	NA	NA	NA	NA	FOXK2	21610	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.96021009898811
chr17	80594524	80594906	80594740	Y	UTS2R,WDR45L	NA	NA	NA	NA	NA	RAB40B	59698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	80712796	80713169	80712899	Y	ZNF750,TBCD	FN3KRP,FN3K,TBCD	NA	NA	NA	NA	TBCD	4856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	80805995	80806457	80806155	Y	NA	NA	NA	NA	NA	NA	TBCD	98055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr17	80817904	80818262	80818042	Y	C17orf62,C17orf62,NARF,METRNL	NA	NA	NA	NA	NA	TBCD	109964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr17	80833209	80833609	80833394	Y	ZNF750	NA	NA	NA	NA	NA	TBCD	125269	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.91814419920349
chr17	80834043	80834346	80834307	Y	ZNF750	NA	NA	NA	NA	NA	TBCD	126103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr17	80845276	80845458	80845382	Y	C17orf62,C17orf62,NARF,METRNL	NA	NA	NA	NA	NA	TBCD	137336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr17	81038687	81040054	81039707	Y	B3GNTL1,METRNL	B3GNTL1,METRNL	NA	NA	NA	NA	METRNL	3120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	81057799	81057924	81057864	Y	METRNL	METRNL	NA	NA	NA	NA	METRNL	22232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr17	81099382	81099733	81099616	Y	NA	NA	METRNL	MCF7	ChIA-PET	22265404	METRNL	63815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.317525130661482
chr18	221277	221425	221379	Y	THOC1,ENOSF1,ENOSF1	THOC1	NA	NA	NA	NA	THOC1	44625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	235900	236290	236249	Y	NA	THOC1	NA	NA	NA	NA	THOC1	29760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	666183	666708	666437	Y	THOC1,YES1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	9843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	667633	668016	667981	Y	THOC1,CLUL1,YES1,TYMS,C18orf56,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.432410234401478
chr18	668283	668526	668405	Y	THOC1,ENOSF1,ENOSF1	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	11943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	679559	679568	679564	Y	NA	TYMS,C18orf56,ENOSF1	NA	NA	NA	NA	C18orf56	23219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	711356	711474	711397	Y	ENOSF1,ENOSF1	ENOSF1	NA	NA	NA	NA	ENOSF1	680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr18	813044	813594	813404	Y	YES1	RNU1-109P,YES1	NA	NA	NA	NA	YES1	2497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.315388218504041
chr18	2548368	2548472	2548420	Y	NA	METTL4,NDC80	NA	NA	NA	NA	METTL4	21036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	2549022	2549121	2549072	Y	NA	METTL4,NDC80	NA	NA	NA	NA	METTL4	20387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	2656589	2657177	2656999	Y	NA	CBX3P2,SMCHD1	NA	NA	NA	NA	SMCHD1	2852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr18	2963165	2963356	2963277	Y	TGIF1,MYL12B,METTL4,SMCHD1,EMILIN2	LPIN2	NA	NA	NA	NA	LPIN2	47957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	2978254	2978441	2978377	Y	NA	LPIN2	NA	NA	NA	NA	LPIN2	32872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	3015219	3015501	3015351	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,METTL4,EMILIN2	LPIN2	LPIN2	K562	ChIA-PET	22265404	LPIN2	3906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.324759021733591
chr18	3058527	3058678	3058565	Y	MYL12B,SMCHD1,LPIN2	LPIN2	NA	NA	NA	NA	LPIN2	47214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	3059400	3059535	3059456	Y	MYL12B,METTL4,SMCHD1	LPIN2	NA	NA	NA	NA	LPIN2	48087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	3250721	3251122	3250738	Y	NA	MYL12A,MYL12B	NA	NA	NA	NA	MYL12A	5242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	3251422	3251674	3251471	Y	MYOM1	MYL12A,MYL12B	NA	NA	NA	NA	MYL12A	5943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr18	3552509	3552635	3552572	Y	DLGAP1	NA	NA	NA	NA	NA	TGIF1	142903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr18	3594733	3596177	3595596	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	185127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr18	3623872	3624258	3624140	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	214266	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.37142161928352
chr18	3624338	3624601	3624482	Y	TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	214732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3446434666748
chr18	3624841	3625119	3625035	Y	MYL12A,MYL12B,MYL12B,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1,TGIF1	NA	NA	NA	NA	NA	TGIF1	215235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.220558990388003
chr18	3625326	3625427	3625380	Y	NA	NA	NA	NA	NA	NA	TGIF1	215720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr18	3665613	3666165	3665884	Y	NA	NA	NA	NA	NA	NA	TGIF1	256007	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.3310799711796
chr18	5294371	5294839	5294435	Y	ZFP161	NA	NA	NA	NA	NA	L3MBTL4	1118397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr18	6021141	6021623	6021376	Y	NA	NA	NA	NA	NA	NA	L3MBTL4	391613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	6187863	6188007	6187935	Y	NA	NA	NA	NA	NA	NA	L3MBTL4	225229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	6193210	6193559	6193391	Y	NA	NA	NA	NA	NA	NA	L3MBTL4	219677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	6355893	6356010	6355962	Y	ARHGAP28,L3MBTL4	NA	NA	NA	NA	NA	L3MBTL4	57226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	7751060	7751343	7751235	Y	NA	NA	NA	NA	NA	NA	PTPRM	186280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.806138030171488
chr18	7802923	7802988	7802937	Y	NA	NA	NA	NA	NA	NA	PTPRM	238143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	7958203	7958469	7958242	Y	NA	NA	NA	NA	NA	NA	PTPRM	393423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr18	8412266	8412506	8412385	Y	NA	NA	NA	NA	NA	NA	RAB12	194937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr18	8689782	8689966	8689874	Y	NA	NA	NDUFV2,RAB12,CCDC165,ANKRD12,PPP4R1,RALBP1	IMR90	Hi-C	24141950	RAB12	82339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	8730480	8730718	8730581	Y	NA	NA	NA	NA	NA	NA	RAB12	123037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194263297367269
chr18	8803155	8803225	8803221	Y	NA	NA	NA	NA	NA	NA	RAB12	195712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	9094792	9095105	9094897	Y	ANKRD12,ANKRD12	NDUFV2,ANKRD12	RALBP1,TWSG1,NDUFV2,CCDC165,ANKRD12	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	NDUFV2	5523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr18	9101793	9102110	9101852	Y	RAB12,ANKRD12,ANKRD12	NDUFV2,ANKRD12	NA	NA	NA	NA	NDUFV2	1165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	9128926	9129321	9129124	Y	NDUFV2,ANKRD12,ANKRD12	NDUFV2,ANKRD12	ANKRD12	IMR90	Hi-C	24141950	ANKRD12	4905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	9129786	9129925	9129855	Y	PPP4R1,ANKRD12,ANKRD12	NDUFV2,ANKRD12	ANKRD12	IMR90	Hi-C	24141950	ANKRD12	4301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	9219810	9220134	9219877	Y	NA	NA	NA	NA	NA	NA	ANKRD12	85584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	9548277	9548390	9548335	Y	ANKRD12,VAPA,RAB31,PPP4R1	NA	NA	NA	NA	NA	PPP4R1	64848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	9554563	9554587	9554575	Y	NA	NA	NA	NA	NA	NA	PPP4R1	58651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	9604214	9604566	9604459	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	8672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	9612296	9612535	9612373	Y	NA	PPP4R1	NA	NA	NA	NA	PPP4R1	703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	9742137	9742641	9742378	Y	NA	RAB31	TXNDC2	IMR90	Hi-C	24141950	RAB31	35975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	9742767	9742849	9742828	Y	VAPA,RAB31	RAB31	TXNDC2	IMR90	Hi-C	24141950	RAB31	36605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	9869849	9870152	9869995	Y	VAPA	VAPA	NA	NA	NA	NA	VAPA	41847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr18	9877272	9877635	9877453	Y	VAPA	VAPA	NA	NA	NA	NA	VAPA	34364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	9899069	9899359	9899167	Y	NA	VAPA	NA	NA	NA	NA	VAPA	12640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	9914998	9915501	9915128	Y	PPP4R1,RAB31,VAPA	VAPA	NA	NA	NA	NA	VAPA	2999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.225816067047433
chr18	10141033	10141178	10141087	Y	NA	NA	APCDD1,NAPG	IMR90	Hi-C	24141950	VAPA	229034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	10297142	10297534	10297283	Y	NA	NA	APCDD1,VAPA	IMR90	Hi-C	24141950	APCDD1	155091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	10708268	10708433	10708298	Y	NA	NA	NA	NA	NA	NA	NAPG	184366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	10726542	10726663	10726595	Y	NAPG	NA	NA	NA	NA	NA	NAPG	202640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	11005597	11005922	11005792	Y	NA	NA	NA	NA	NA	NA	NAPG	481695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.986104976077288
chr18	11431991	11432229	11432112	Y	NA	NA	NA	NA	NA	NA	GNAL	254726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr18	11849903	11850727	11850169	Y	MPPE1,CHMP1B	CHMP1B	NA	NA	NA	NA	CHMP1B	508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr18	11859926	11860218	11860181	Y	CHMP1B	CHMP1B,MPPE1	NA	NA	NA	NA	CHMP1B	10531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	11947272	11947721	11947412	Y	CHMP1B	MPPE1,IMPA2	IMPA2,GNAL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	IMPA2	31303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.404468743788376
chr18	11995516	11995787	11995574	Y	NA	IMPA2	NA	NA	NA	NA	IMPA2	16492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	12288068	12288497	12288213	Y	NA	TUBB6	TUBB6	IMR90	Hi-C	24141950	TUBB6	17171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	12317654	12318000	12317871	Y	CHMP1B	TUBB6	NA	NA	NA	NA	TUBB6	11986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	12471098	12471401	12471374	Y	PSMG2	NA	NA	NA	NA	NA	AFG3L2	95785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	12606965	12607268	12607096	Y	PTPN2,SPIRE1	AP005482.1,SPIRE1,PSMG2	NA	NA	NA	NA	AP005482.1	48774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	12763760	12763785	12763774	Y	CEP192,C18orf1	NA	PTPN2	IMR90	Hi-C	24141950	CEP76	62984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	12864190	12864369	12864245	Y	NA	NA	NA	NA	NA	NA	PTPN2	63273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	12993260	12993605	12993433	Y	NA	SEH1L,CEP192	NA	NA	NA	NA	CEP192	3899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	13137958	13138425	13138153	Y	NA	NA	NA	NA	NA	NA	CEP192	148597	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.68427159809136
chr18	13175824	13176186	13176005	Y	C18orf1	NA	NA	NA	NA	NA	CEP192	186463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.339878016187644
chr18	13217020	13217525	13217240	Y	NA	NA	NA	NA	NA	NA	CEP192	227659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.446706585862946
chr18	13219877	13220140	13220009	Y	C18orf1,C18orf1	NA	NA	NA	NA	NA	CEP192	230516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	13220671	13221282	13220939	Y	NA	NA	NA	NA	NA	NA	CEP192	231310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	13313521	13313917	13313675	Y	NA	NA	NA	NA	NA	NA	CEP192	324160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	13418060	13418088	13418062	Y	NA	NA	NA	NA	NA	NA	RNMT	306571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	13470863	13471264	13471112	Y	NA	NA	NA	NA	NA	NA	RNMT	253395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	13500609	13500835	13500766	Y	NA	NA	NA	NA	NA	NA	RNMT	223824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	13542199	13542509	13542255	Y	NA	NA	NA	NA	NA	NA	RNMT	182150	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.7424310896975
chr18	13579325	13579466	13579390	Y	RNMT,C18orf19,C18orf1	NA	NA	NA	NA	NA	RNMT	145193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	14111961	14112330	14112146	Y	NA	ZNF519	NA	NA	NA	NA	ZNF519	18159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	19090172	19090203	19090178	Y	NA	NA	NA	NA	NA	NA	ESCO1	88642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	19279600	19279639	19279620	Y	NA	ABHD3,MIB1	NA	NA	NA	NA	ABHD3	3127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	19415827	19415836	19415832	Y	NA	NA	NA	NA	NA	NA	MIB1	132909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	19774212	19774351	19774284	Y	GATA6	GATA6	NA	NA	NA	NA	GATA6	26808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr18	19862450	19862773	19862669	Y	NA	NA	GATA6	IMR90	Hi-C	24141950	GATA6	115046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr18	20138967	20139156	20139093	Y	GATA6	NA	CTAGE1,GATA6	IMR90	Hi-C	24141950	RBBP8	237068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	20835223	20835287	20835255	Y	NA	NA	NA	NA	NA	NA	CABLES1	122695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	20855209	20855599	20855401	Y	NA	NA	NA	NA	NA	NA	CABLES1	142681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	21091625	21091887	21091629	Y	C18orf8	C18orf8	NA	NA	NA	NA	C18orf8	10152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	21153994	21154335	21154180	Y	NA	NPC1	NA	NA	NA	NA	NPC1	10527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	21165246	21165762	21165429	Y	C18orf8,NPC1	NPC1	NA	NA	NA	NA	NPC1	384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr18	21198837	21198991	21198936	Y	NA	NPC1,ANKRD29	NA	NA	NA	NA	NPC1	33975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	21463540	21463749	21463607	Y	NA	NA	NA	NA	NA	NA	TTC39C	106988	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03508508305169
chr18	23609881	23610142	23609962	Y	NA	NA	NA	NA	NA	NA	SS18	59039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	23657156	23657540	23657507	Y	NA	SS18	NA	NA	NA	NA	SS18	11641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	23836366	23836416	23836389	Y	TAF4B	TAF4B	NA	NA	NA	NA	TAF4B	32466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr18	24536394	24536497	24536444	Y	KCTD1,KCTD1,AQP4,AQP4,CHST9	NA	NA	NA	NA	NA	KCTD1	301029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	25645893	25646031	25645963	Y	NA	NA	NA	NA	NA	NA	CDH2	109379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	25674451	25674773	25674612	Y	NA	NA	NA	NA	NA	NA	CDH2	80637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	25691984	25692409	25692174	Y	NA	NA	NA	NA	NA	NA	CDH2	63001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	25695112	25695346	25695270	Y	CDH2	NA	NA	NA	NA	NA	CDH2	60064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	25754926	25755429	25755157	Y	CDH2	NA	NA	NA	NA	NA	CDH2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.365351066215793
chr18	26231611	26231936	26231774	Y	NA	NA	NA	NA	NA	NA	CDH2	476201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	28786845	28787168	28787084	Y	DSC3,DSC2,DSG3,DSG2,DSG1,DSC1	NA	DSC2	MCF7	ChIA-PET	22265404	DSC2	106467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.889138835803809
chr18	28805681	28805804	28805743	Y	NA	NA	NA	NA	NA	NA	DSC2	125303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	28823621	28824065	28823663	Y	NA	NA	DSC2	MCF7	ChIA-PET	22265404	DSC2	143243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.560105989755336
chr18	28981595	28981685	28981659	Y	NA	NA	NA	NA	NA	NA	DSG2	94321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	29092491	29092685	29092630	Y	DSC3,DSC2,DSG1,DSG2	DSG2	NA	NA	NA	NA	DSG2	16485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr18	29354326	29354665	29354429	Y	NA	NA	NA	NA	NA	NA	B4GALT6	90527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr18	29542474	29542964	29542885	Y	RNF138	TRAPPC8	NA	NA	NA	NA	TRAPPC8	11375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr18	29599439	29599921	29599769	Y	RNF138,RNF138,TRAPPC8,RNF125	RNF125	NA	NA	NA	NA	RNF125	3104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	30724477	30724607	30724523	Y	NA	NA	NA	NA	NA	NA	KLHL14	373452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	30862088	30862282	30862185	Y	NA	NA	NA	NA	NA	NA	KLHL14	511063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	31140777	31140968	31140873	Y	NA	NA	NA	NA	NA	NA	KLHL14	789752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	32106446	32106756	32106602	Y	NA	NA	NA	NA	NA	NA	MAPRE2	448136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	32239709	32239834	32239782	Y	MAPRE2,DTNA,DTNA,DTNA,DTNA,DTNA,DTNA	NA	NA	NA	NA	NA	MAPRE2	315058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	32291109	32291369	32291156	Y	MAPRE2,NOL4,DTNA,DTNA,DTNA,DTNA,DTNA,DTNA,DTNA	NA	NA	NA	NA	NA	MAPRE2	263523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	32413678	32413828	32413755	Y	NA	NA	NA	NA	NA	NA	MAPRE2	141064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	32558962	32559433	32559316	Y	ZNF397,ZNF396,ZNF24,MAPRE2,MAPRE2	MAPRE2	NA	NA	NA	NA	MAPRE2	4070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr18	32610382	32610507	32610471	Y	ZNF24,MAPRE2	NA	NA	NA	NA	NA	MAPRE2	55490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	32674767	32675124	32674837	Y	NA	NA	NA	NA	NA	NA	MAPRE2	119875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr18	32684186	32684352	32684206	Y	NA	NA	NA	NA	NA	NA	MAPRE2	129294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	32925283	32925658	32925513	Y	MAPRE2,MAPRE2,MAPRE2,ZNF397,ZNF24	ZNF24,ZNF396	NA	NA	NA	NA	ZNF24	1837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.297309157292762
chr18	33038926	33039146	33039052	Y	NA	INO80C	NA	NA	NA	NA	INO80C	36809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	33040584	33040905	33040747	Y	NA	INO80C	NA	NA	NA	NA	INO80C	35050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	33057648	33057699	33057650	Y	MAPRE2,MAPRE2,ZNF24,ZNF396,INO80C	INO80C	NA	NA	NA	NA	INO80C	18256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	33071303	33071471	33071398	Y	NA	INO80C	NA	NA	NA	NA	INO80C	4484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	33073738	33073904	33073824	Y	NA	INO80C	NA	NA	NA	NA	INO80C	2051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	33185452	33185527	33185471	Y	ZNF397,GALNT1	GALNT1	NA	NA	NA	NA	GALNT1	26371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	33311016	33311295	33311162	Y	NA	NA	NA	NA	NA	NA	GALNT1	151935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15383135062983
chr18	33711406	33711801	33711526	Y	NA	SLC39A6,ELP2	NA	NA	NA	NA	ELP2	3999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr18	34204611	34205032	34204799	Y	NA	NA	NA	NA	NA	NA	KIAA1328	202037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	34406593	34406898	34406790	Y	NA	KIAA1328,TPGS2	NA	NA	NA	NA	KIAA1328	171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	34813677	34814006	34813844	Y	NA	NA	NA	NA	NA	NA	TPGS2	406519	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	36850987	36851328	36851158	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	62311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	36903724	36904130	36903931	Y	NA	RPL7AP66	NA	NA	NA	NA	RPL7AP66	9509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	37033966	37034182	37034037	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	120327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	37151664	37151869	37151793	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	238025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	37629293	37629563	37629339	Y	NA	NA	NA	NA	NA	NA	RPL7AP66	715654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	39768386	39768788	39768438	Y	NA	NA	NA	NA	NA	NA	PIK3C3	235215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	39840158	39840520	39840205	Y	NA	NA	NA	NA	NA	NA	PIK3C3	306987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr18	39965392	39965594	39965467	Y	NA	NA	NA	NA	NA	NA	PIK3C3	432221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	40066860	40066928	40066894	Y	NA	NA	NA	NA	NA	NA	PIK3C3	533689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	42324731	42325124	42324894	Y	SETBP1,SETBP1	NA	NA	NA	NA	NA	SETBP1	66593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	43210324	43210708	43210352	Y	NA	NA	NA	NA	NA	NA	SLC14A1	91384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	43533217	43533245	43533231	Y	NA	EPG5	NA	NA	NA	NA	EPG5	11995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	44372138	44372406	44372272	Y	RNF165,PIAS2	NA	NA	NA	NA	NA	KATNAL2	123049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	44392877	44393138	44393020	Y	NA	NA	NA	NA	NA	NA	KATNAL2	102317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	44675442	44676177	44675810	Y	NA	HDHD2,IER3IP1	NA	NA	NA	NA	HDHD2	551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	45420480	45420806	45420653	Y	NA	SMAD2	NA	NA	NA	NA	SMAD2	34709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	45444466	45444807	45444662	Y	NA	SMAD2	NA	NA	NA	NA	SMAD2	10708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	45454827	45455289	45455128	Y	NA	SMAD2	NA	NA	NA	NA	SMAD2	226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	45534549	45534809	45534718	Y	NA	NA	NA	NA	NA	NA	SMAD2	79034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr18	45688048	45688324	45688110	Y	NA	NA	NA	NA	NA	NA	SMAD2	232533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr18	46066779	46067121	46067052	Y	CTIF	CTIF	NA	NA	NA	NA	CTIF	3362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr18	46074456	46074621	46074556	Y	NA	CTIF	NA	NA	NA	NA	CTIF	11039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	46242460	46242735	46242629	Y	SMAD7	NA	NA	NA	NA	NA	CTIF	179043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	46253142	46253362	46253168	Y	NA	NA	NA	NA	NA	NA	CTIF	189725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	46254756	46255278	46254982	Y	NA	NA	NA	NA	NA	NA	CTIF	191339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	46307580	46307886	46307760	Y	SMAD7	NA	NA	NA	NA	NA	SMAD7	167195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	46349762	46350033	46349891	Y	NA	NA	NA	NA	NA	NA	SMAD7	125048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr18	46353431	46353823	46353627	Y	NA	NA	NA	NA	NA	NA	SMAD7	121258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	46404939	46405048	46404994	Y	NA	NA	NA	NA	NA	NA	SMAD7	70033	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	46423062	46423579	46423314	Y	SMAD7	NA	SMAD7	MCF7	ChIA-PET	22265404	SMAD7	51502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr18	46428346	46428737	46428479	Y	NA	SMAD7	NA	NA	NA	NA	SMAD7	46344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.556163182260764
chr18	46455103	46455621	46455353	Y	SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	19460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr18	46456597	46456819	46456703	Y	SMAD7,SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	18262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.359271346563779
chr18	46459367	46459671	46459607	Y	SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	15410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	46465508	46465942	46465798	Y	SMAD7,SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	9139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr18	46467138	46467469	46467322	Y	SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	7612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr18	46472885	46473143	46472966	Y	NA	SMAD7	NA	NA	NA	NA	SMAD7	1938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr18	46473942	46474323	46474293	Y	NA	SMAD7	NA	NA	NA	NA	SMAD7	758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	46478230	46479206	46479122	Y	SMAD7,SMAD7	SMAD7	NA	NA	NA	NA	SMAD7	3149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr18	46502180	46502412	46502333	Y	SMAD7	SMAD7	SMAD7,CTIF	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	SMAD7	27099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.205108467506439
chr18	46520518	46520924	46520659	Y	NA	SMAD7	CTIF,SMAD7,DYM	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMAD7	45437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	46547875	46548139	46548027	Y	NA	NA	SMAD7	MCF7	ChIA-PET	22265404	SMAD7	72794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.556003084516001
chr18	46582084	46582553	46582428	Y	SMAD7,DYM	NA	NA	NA	NA	NA	SMAD7	107003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	46598750	46599196	46598974	Y	DYM	NA	NA	NA	NA	NA	SMAD7	123669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr18	46946352	46946456	46946404	Y	NA	DYM	NA	NA	NA	NA	DYM	39261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	47325286	47325511	47325399	Y	NA	ACAA2	NA	NA	NA	NA	ACAA2	12819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	47834061	47834491	47834223	Y	CCDC11,MBD1,MBD1	CCDC11,MBD1,CXXC1	CCDC11,CXXC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CXXC1	21387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	47834587	47834811	47834691	Y	NA	CCDC11,MBD1,CXXC1	CCDC11,CXXC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CXXC1	21913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	48380307	48380600	48380464	Y	ME2	ME2	SMAD4	IMR90	Hi-C	24141950	ME2	22819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	48462357	48462700	48462360	Y	ME2	ELAC1,SMAD4	NA	NA	NA	NA	ELAC1	29661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	48616016	48616044	48616031	Y	NA	NA	NA	NA	NA	NA	SMAD4	123606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr18	48721492	48722312	48721913	Y	SMAD4,MEX3C	MEX3C	NA	NA	NA	NA	MEX3C	20362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr18	48737977	48738244	48738154	Y	ME2	MEX3C	MEX3C	K562	ChIA-PET	22265404	MEX3C	4430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	49479835	49480219	49480027	Y	NA	NA	NA	NA	NA	NA	MEX3C	737161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr18	51699489	51699550	51699520	Y	NA	MBD2	NA	NA	NA	NA	MBD2	49608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	51860775	51860976	51860876	Y	NA	NA	NA	NA	NA	NA	POLI	67001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	51883843	51884006	51883925	Y	NA	NA	NA	NA	NA	NA	POLI	90069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	52698891	52699047	52699006	Y	NA	NA	NA	NA	NA	NA	CCDC68	74152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	54439234	54439547	54439439	Y	WDR7	NA	NA	NA	NA	NA	TXNL1	122403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	55098490	55098766	55098627	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	2151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	55104670	55104954	55104730	Y	NA	ONECUT2	NA	NA	NA	NA	ONECUT2	3753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr18	55109141	55109496	55109318	Y	ONECUT2	ONECUT2	NA	NA	NA	NA	ONECUT2	8224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr18	55448232	55448442	55448350	Y	NA	ATP8B1	NA	NA	NA	NA	ATP8B1	19891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	55710685	55710979	55710720	Y	NEDD4L	NEDD4L	NA	NA	NA	NA	NEDD4L	1086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	55768514	55768737	55768683	Y	NEDD4L	NA	NA	NA	NA	NA	NEDD4L	58915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	55863542	55863917	55863628	Y	NA	NA	NA	NA	NA	NA	NEDD4L	153943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	55872819	55873190	55873005	Y	NEDD4L,NEDD4L	NA	NA	NA	NA	NA	NEDD4L	163220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	55889534	55890049	55889817	Y	MALT1	NA	NA	NA	NA	NA	NEDD4L	179935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	55890970	55891630	55891068	Y	NEDD4L,NEDD4L	NA	NA	NA	NA	NA	NEDD4L	181371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.294680618963047
chr18	56074480	56074676	56074577	Y	NEDD4L	NA	NA	NA	NA	NA	SNORD28	191187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr18	56081187	56081552	56081390	Y	NA	NA	NA	NA	NA	NA	SNORD28	184311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.612537278052041
chr18	56096279	56096485	56096382	Y	NA	NA	NA	NA	NA	NA	SNORD28	169378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	56117134	56117320	56117186	Y	NA	NA	NA	NA	NA	NA	SNORD28	148543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	56188177	56188434	56188359	Y	MALT1	NA	NA	NA	NA	NA	SNORD28	77429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	56193191	56193601	56193321	Y	MALT1	NA	NA	NA	NA	NA	SNORD28	72262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167967604346536
chr18	56194097	56194141	56194127	Y	NEDD4L,MALT1	NA	NA	NA	NA	NA	SNORD28	71722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.716405780970118
chr18	56339458	56339877	56339543	Y	MALT1	ALPK2,MALT1	NA	NA	NA	NA	MALT1	2840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	56359373	56359598	56359412	Y	NA	MALT1	NA	NA	NA	NA	MALT1	22755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	56394566	56394962	56394680	Y	MALT1	NA	NA	NA	NA	NA	MALT1	57948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	56633214	56633485	56633410	Y	ZNF532	NA	NA	NA	NA	NA	U8	148966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	59766177	59766307	59766242	Y	NA	NA	NA	NA	NA	NA	PIGN	86044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	59968434	59968761	59968590	Y	NA	TNFRSF11A	NA	NA	NA	NA	TNFRSF11A	21759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	60087446	60087621	60087533	Y	ZCCHC2	NA	PHLPP1,ZCCHC2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TNFRSF11A	96926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr18	60087978	60088258	60088046	Y	KIAA1468,ZCCHC2	NA	PHLPP1,ZCCHC2,TNFRSF11A,BCL2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFRSF11A	97458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	60118389	60118639	60118544	Y	KIAA1468,ZCCHC2	NA	PHLPP1,ZCCHC2	IMR90	Hi-C	24141950	ZCCHC2	69601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr18	60119520	60119795	60119627	Y	KIAA1468,ZCCHC2	NA	PHLPP1,ZCCHC2	IMR90	Hi-C	24141950	ZCCHC2	68445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285149717988735
chr18	60172936	60173272	60173091	Y	NA	ZCCHC2	ZCCHC2	MCF7	ChIA-PET	22265404	ZCCHC2	14968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr18	60189219	60189514	60189362	Y	TNFRSF11A,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	979	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.18510508103956
chr18	60193382	60194139	60194065	Y	KIAA1468,PHLPP1,ZCCHC2	ZCCHC2	NA	NA	NA	NA	ZCCHC2	5142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.743524116983435
chr18	60221448	60221638	60221488	Y	NA	ZCCHC2	NA	NA	NA	NA	ZCCHC2	33208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	60263992	60264160	60264076	Y	NA	NA	NA	NA	NA	NA	ZCCHC2	75752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr18	60445199	60445356	60445226	Y	NA	NA	NA	NA	NA	NA	PHLPP1	64527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	61033511	61033750	61033687	Y	NA	BCL2,KDSR	NA	NA	NA	NA	KDSR	768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr18	61085026	61085396	61085214	Y	VPS4B	VPS4B	NA	NA	NA	NA	VPS4B	2320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	61350519	61350880	61350698	Y	SERPINB5,SERPINB12,SERPINB3,SERPINB11	NA	SERPINB10,SERPINB7	IMR90	Hi-C	24141950	SERPINB2	186046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	63445505	63445788	63445646	Y	CDH7	NA	NA	NA	NA	NA	CDH19	823587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	65027496	65027665	65027594	Y	NA	NA	NA	NA	NA	NA	DSEL	154552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	66373953	66374204	66374079	Y	NA	CCDC102B,TMX3	NA	NA	NA	NA	CCDC102B	6242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	67069140	67069566	67069456	Y	DOK6	DOK6	NA	NA	NA	NA	DOK6	2849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr18	67083698	67084057	67083878	Y	DOK6	DOK6	NA	NA	NA	NA	DOK6	17407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	67285857	67286143	67286048	Y	NA	NA	NA	NA	NA	NA	DOK6	219566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr18	67430849	67430952	67430901	Y	DOK6,RTTN	NA	NA	NA	NA	NA	DOK6	364558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	67602629	67602968	67602766	Y	RTTN,CD226	NA	NA	NA	NA	NA	RTTN	268213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	67682034	67682164	67682099	Y	NA	NA	NA	NA	NA	NA	RTTN	189017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	67957012	67957306	67957264	Y	NA	SOCS6	NA	NA	NA	NA	SOCS6	2875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr18	68001159	68001386	68001197	Y	NA	SOCS6	NA	NA	NA	NA	SOCS6	47022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.31358232316691
chr18	68002975	68003345	68003133	Y	NA	SOCS6	NA	NA	NA	NA	SOCS6	48838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.332975653543046
chr18	68004496	68004658	68004562	Y	NA	NA	NA	NA	NA	NA	SOCS6	50359	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.89437860250907
chr18	68044126	68044452	68044254	Y	NA	NA	RTTN	IMR90	Hi-C	24141950	SOCS6	89989	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.65550746448568
chr18	68087534	68087889	68087601	Y	CD226,SOCS6	NA	RTTN,SOCS6	IMR90	Hi-C	24141950	SOCS6	133397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr18	68088825	68088985	68088877	Y	SOCS6	NA	RTTN,SOCS6	IMR90	Hi-C	24141950	SOCS6	134688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	70535937	70536272	70536159	Y	NA	NA	NA	NA	NA	NA	FBXO15	1276828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	71819121	71819367	71819268	Y	C18orf55	FBXO15,TIMM21	NA	NA	NA	NA	TIMM21	5375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	71901673	71901892	71901764	Y	NA	NA	NA	NA	NA	NA	CYB5A	55359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.298131800285346
chr18	71910001	71910146	71910074	Y	NA	CYB5A	NA	NA	NA	NA	CYB5A	47105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	71916623	71916973	71916652	Y	CNDP2	CYB5A	NA	NA	NA	NA	CYB5A	40278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	71950185	71950349	71950304	Y	NA	CYB5A	NA	NA	NA	NA	CYB5A	6902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr18	72208946	72209159	72209053	Y	FAM69C,CNDP1	CNDP2	NA	NA	NA	NA	CNDP2	47895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.297309157292762
chr18	72452985	72453338	72453047	Y	C18orf63	NA	NA	NA	NA	NA	ZNF407	189879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	72676291	72676559	72676424	Y	ZNF407,TSHZ1	NA	NA	NA	NA	NA	ZADH2	242744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr18	72782580	72783607	72783115	Y	ZNF407,ZADH2,TSHZ1	NA	NA	NA	NA	NA	ZADH2	135696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.404628841533138
chr18	72916177	72916455	72916218	Y	NA	ZADH2,TSHZ1	NA	NA	NA	NA	ZADH2	2848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	74104077	74104276	74104177	Y	NA	NA	NA	NA	NA	NA	ZNF516	100870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	74162277	74162639	74162448	Y	ZNF516	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	42507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	74171783	74172228	74172071	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	32918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	74194351	74194716	74194640	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	10430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	74195251	74195532	74195392	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	9614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	74199867	74199923	74199879	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	ZNF516	5223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr18	74204839	74205357	74205296	Y	NA	RP11-17M16.1	NA	NA	NA	NA	ZNF516	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.884704913744163
chr18	74205649	74206020	74205889	Y	NA	ZNF516,RP11-17M16.1	NA	NA	NA	NA	RP11-17M16.1	172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.676796477225262
chr18	74292470	74292738	74292612	Y	NA	NA	NA	NA	NA	NA	RP11-17M16.1	86993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	74766602	74767022	74766743	Y	MBP	NA	NA	NA	NA	NA	MBP	76617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr18	74767033	74767545	74767189	Y	MBP	NA	NA	NA	NA	NA	MBP	76094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	74768655	74769369	74768895	Y	MBP	NA	NA	NA	NA	NA	MBP	74270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr18	74805603	74805845	74805816	Y	MBP	MBP	NA	NA	NA	NA	MBP	37794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr18	74826312	74827078	74826635	Y	NA	MBP	NA	NA	NA	NA	MBP	16561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr18	74829789	74830209	74830033	Y	MBP	MBP	NA	NA	NA	NA	MBP	13430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr18	74830215	74830809	74830560	Y	MBP	MBP	NA	NA	NA	NA	MBP	12830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	74840150	74840705	74840388	Y	MBP	MBP	NA	NA	NA	NA	MBP	2934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	75149077	75149342	75149210	Y	NA	NA	NA	NA	NA	NA	MBP	305438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr18	76734377	76734736	76734420	Y	NA	NA	NA	NA	NA	NA	ATP9B	92549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	76831132	76831674	76831321	Y	NFATC1,NFATC1,ATP9B	ATP9B	NA	NA	NA	NA	ATP9B	3847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	77218531	77218849	77218576	Y	NFATC1,CTDP1	NA	NA	NA	NA	NA	CTDP1	218952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr18	77554904	77555044	77554983	Y	PQLC1,ADNP2,NFATC1,CTDP1,CTDP1	NA	KCNG2,PQLC1,CTDP1,RBFA,TXNL4A	IMR90	Hi-C	24141950	CTDP1	117103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	77558494	77558673	77558529	Y	NA	NA	KCNG2,PQLC1,CTDP1,RBFA,TXNL4A	IMR90	Hi-C	24141950	CTDP1	120693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	77682652	77682872	77682762	Y	NA	PQLC1,HSBP1L1	NA	NA	NA	NA	PQLC1	26792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr18	78004258	78004625	78004566	Y	PARD6G	PARD6G	NA	NA	NA	NA	PARD6G	829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	485856	486161	485966	Y	PALM,HCN2,FGF22,C2CD4C,SHC2	SHC2,MADCAM1,TPGS1,CDC34	ODF3L2,SHC2	MCF7	ChIA-PET	22265404	MADCAM1	1015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167967604346536
chr19	488227	488667	488380	Y	NA	SHC2,MADCAM1,TPGS1,CDC34	ODF3L2,SHC2,TPGS1,MADCAM1	MCF7,K562	ChIA-PET	22265404	MADCAM1	1051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr19	510583	510951	510744	Y	NA	MADCAM1,TPGS1,CDC34	NA	NA	NA	NA	TPGS1	5284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	511222	511648	511350	Y	RNF126,GZMM	MADCAM1,TPGS1,CDC34	NA	NA	NA	NA	TPGS1	5923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	532930	533293	533259	Y	C19orf6,C19orf22,ARID3A	MADCAM1,TPGS1,CDC34,BSG	NA	NA	NA	NA	CDC34	3216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.318347773654067
chr19	555976	556322	556024	Y	NA	CDC34,BSG	NA	NA	NA	NA	BSG	12975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr19	567332	567750	567473	Y	NA	CDC34,BSG	NA	NA	NA	NA	BSG	1547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	573434	573573	573481	Y	ODF3L2,C19orf22,CDC34,BSG	CDC34,BSG	NA	NA	NA	NA	BSG	4137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	661410	661735	661571	Y	HMHA1,GZMM,C19orf6,ABCA7,RNF126	POLRMT,RNF126,FSTL3,PALM	NA	NA	NA	NA	RNF126	133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	662216	662510	662281	Y	HMHA1,GZMM,C19orf6,C19orf22,ABCA7,RNF126	POLRMT,RNF126,FSTL3,PALM	NA	NA	NA	NA	RNF126	939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr19	678997	679265	679214	Y	HCN2,PALM	POLRMT,RNF126,FSTL3,PALM	NA	NA	NA	NA	FSTL3	4605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	752652	753043	752777	Y	PPAP2C,PPAP2C,FSTL3,C19orf21	PALM,PTBP1,MIR4745	NA	NA	NA	NA	PTBP1	42032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	778993	779222	779048	Y	GPX4,BSG,CNN2	PTBP1,MIR4745,MIR3187	NA	NA	NA	NA	PTBP1	15853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr19	782330	783005	782707	Y	NA	PTBP1,MIR4745,MIR3187	NA	NA	NA	NA	PTBP1	12070	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.45950858249973
chr19	789308	789721	789469	Y	NA	PTBP1,MIR4745,MIR3187	NA	NA	NA	NA	PTBP1	5354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	908605	908810	908775	Y	NA	MED16,R3HDM4,KISS1R,ARID3A	NA	NA	NA	NA	R3HDM4	2430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	925071	925217	925123	Y	NA	MED16,R3HDM4,KISS1R,ARID3A	NA	NA	NA	NA	ARID3A	1290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.494040895244984
chr19	928103	928378	928301	Y	SBNO2,MIDN,HMHA1,C19orf22,KISS1R,ARID3A	MED16,R3HDM4,KISS1R,ARID3A	NA	NA	NA	NA	ARID3A	4322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.32821020305589
chr19	934999	935434	935086	Y	MIDN,CIRBP	MED16,R3HDM4,KISS1R,ARID3A,WDR18	NA	NA	NA	NA	ARID3A	11218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr19	951651	951841	951690	Y	NA	R3HDM4,KISS1R,ARID3A,WDR18	NA	NA	NA	NA	ARID3A	27870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	953220	953565	953383	Y	EFNA2,MADCAM1,KISS1R,ARID3A	R3HDM4,KISS1R,ARID3A,WDR18	NA	NA	NA	NA	WDR18	27609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.449175026447899
chr19	958944	959162	959060	Y	NA	R3HDM4,KISS1R,ARID3A,WDR18	NA	NA	NA	NA	WDR18	22012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.788230399642958
chr19	980601	980803	980725	Y	NA	WDR18,RNU6-2,CNN2	NA	NA	NA	NA	WDR18	371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr19	1028160	1028923	1028240	Y	SBNO2,SBNO2,MIDN,HMHA1,CIRBP,CDC34,GZMM,RNF126,C19orf22,C19orf6,CNN2,ABCA7	WDR18,RNU6-2,CNN2,ABCA7,HMHA1	NA	NA	NA	NA	CNN2	3862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr19	1085284	1085426	1085350	Y	C19orf22,ARID3A,ABCA7,MIDN,CIRBP,HMHA1,SBNO2,SBNO2	ABCA7,HMHA1,POLR2E,GPX4	NA	NA	NA	NA	POLR2E	8172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	1140329	1140530	1140433	Y	NA	POLR2E,GPX4,SBNO2,STK11	NA	NA	NA	NA	SBNO2	31752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	1171933	1172315	1172045	Y	NA	STK11	NA	NA	NA	NA	SBNO2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	1172839	1173266	1172915	Y	CFD,ATP5D,GPX4,GPX4	SBNO2,STK11	NA	NA	NA	NA	SBNO2	557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr19	1183874	1184237	1184064	Y	SBNO2	SBNO2,STK11	ATP5D,MIDN,SBNO2,STK11,GPX4	MCF7	ChIA-PET	22265404	STK11	3169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	1240232	1240534	1240365	Y	MUM1,APC2,C19orf26	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	ATP5D	483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr19	1252961	1253429	1253036	Y	C19orf22,ARID3A,CNN2,ABCA7,HMHA1,SBNO2,SBNO2,MIDN,CIRBP	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	CIRBP	3955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	1260732	1261171	1260912	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	CIRBP	3348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr19	1262305	1262850	1262469	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	CIRBP	4921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr19	1266359	1266798	1266589	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	C19orf24	6228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.316210861496625
chr19	1280981	1281104	1281044	Y	NA	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	MUM1	2786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	1284432	1284856	1284552	Y	REEP6,ONECUT3,GAMT,EFNA2	C19orf26,ATP5D,MIDN,CIRBP,C19orf24,MUM1,EFNA2	NA	NA	NA	NA	EFNA2	279	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05118681824309
chr19	1400453	1400832	1400746	Y	NA	NDUFS7,GAMT,DAZAP1,RPS15	NA	NA	NA	NA	GAMT	884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.764071107172465
chr19	1408607	1408695	1408655	Y	CNN2,POLR2E,GPX4,GPX4,UQCR11,SCAMP4,FAM108A1,ADAT3,RPS15	NDUFS7,GAMT,DAZAP1,RPS15	NA	NA	NA	NA	DAZAP1	3039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr19	1408835	1409120	1409078	Y	NA	NDUFS7,GAMT,DAZAP1,RPS15	NA	NA	NA	NA	DAZAP1	3267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	1410481	1410741	1410600	Y	NA	NDUFS7,GAMT,DAZAP1,RPS15	NA	NA	NA	NA	DAZAP1	4913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	1651371	1651730	1651556	Y	NA	UQCR11,TCF3	NA	NA	NA	NA	TCF3	767	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	1725719	1725877	1725796	Y	C19orf26,MUM1,APC2	ONECUT3	TCF3,C19orf25,ONECUT3,PLK5,UQCR11,ATP8B3,LOC100288123,REXO1	IMR90	Hi-C	24141950	ONECUT3	24495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	1747200	1747550	1747426	Y	PLEKHJ1,DAZAP1,RPS15,ONECUT3	ONECUT3	TCF3,ONECUT3,ADAMTSL5,PLK5,UQCR11,ATP8B3,REXO1,LOC100288123	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ONECUT3	2822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	1840916	1841078	1840939	Y	NA	ATP8B3,REXO1,KLF16	NA	NA	NA	NA	REXO1	5374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	1856794	1856864	1856840	Y	NA	ATP8B3,REXO1,KLF16,SCAMP4,ADAT3	NA	NA	NA	NA	KLF16	4703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	1909763	1910077	1909925	Y	KLF16	KLF16,SCAMP4,ADAT3,AC012615.1,CSNK1G2	NA	NA	NA	NA	ADAT3	6386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	1942393	1942508	1942451	Y	OAZ1,DOT1L,C19orf35,MOBKL2A,MKNK2,REXO1,KLF16,CSNK1G2	SCAMP4,ADAT3,AC012615.1,CSNK1G2	NA	NA	NA	NA	CSNK1G2	3205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr19	2049976	2050209	2050080	Y	OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MOBKL2A,MKNK2	BTBD2,MKNK2,IZUMO4,MOB3A	NA	NA	NA	NA	MKNK2	733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	2056461	2056895	2056707	Y	OAZ1,C19orf35,FAM108A1,SCAMP4,ADAT3,BTBD2,MKNK2,MOBKL2A	BTBD2,MKNK2,IZUMO4,MOB3A	NA	NA	NA	NA	MKNK2	7218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2059605	2060167	2060113	Y	REXO1,FAM108A1,SCAMP4,ADAT3,BTBD2	BTBD2,MKNK2,IZUMO4,MOB3A	NA	NA	NA	NA	MKNK2	10362	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.46616971535033
chr19	2061356	2061737	2061654	Y	SF3A2,OAZ1,GADD45B,DOT1L,C19orf35,REXO1,CSNK1G2,MKNK2,MOBKL2A	BTBD2,MKNK2,IZUMO4,MOB3A	NA	NA	NA	NA	MKNK2	12113	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.09211039115281
chr19	2165096	2165788	2165320	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	2632	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.20239014215041
chr19	2167436	2167667	2167594	Y	CSNK1G2,GADD45B,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	4972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.447529228855531
chr19	2168320	2168637	2168529	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	5856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	2168890	2169464	2169082	Y	REXO1,CSNK1G2,OAZ1,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	6426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr19	2171377	2171588	2171512	Y	REXO1,CSNK1G2,MKNK2,MOBKL2A,GADD45B,C19orf35,DOT1L	DOT1L,AP3D1	NA	NA	NA	NA	AP3D1	8913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr19	2266489	2266732	2266611	Y	NA	SF3A2,PLEKHJ1,OAZ1,JSRP1	NA	NA	NA	NA	OAZ1	753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2330710	2331138	2330903	Y	NA	SPPL2B,LSM7	NA	NA	NA	NA	LSM7	4091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr19	2394369	2394570	2394516	Y	NA	TIMM13	NA	NA	NA	NA	TIMM13	31322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	2394788	2394991	2394868	Y	CSNK1G2,DOT1L,TMPRSS9	TIMM13	NA	NA	NA	NA	TIMM13	30901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	2494705	2495117	2494880	Y	DOT1L,GADD45B	LMNB2,GADD45B	NA	NA	NA	NA	GADD45B	20585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	2507206	2507458	2507335	Y	DOT1L,OAZ1,C19orf35,GADD45B	GADD45B	NA	NA	NA	NA	GADD45B	33086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	2524971	2525260	2525066	Y	NA	NA	NA	NA	NA	NA	GADD45B	50851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	2529574	2529858	2529677	Y	NA	NA	NA	NA	NA	NA	GADD45B	55454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	2540691	2541097	2540881	Y	TIMM13	NA	NA	NA	NA	NA	GADD45B	66571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	2543618	2543970	2543682	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	GADD45B	69498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.437666799453707
chr19	2544084	2544261	2544159	Y	NA	NA	NA	NA	NA	NA	GADD45B	69964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2545643	2546037	2545824	Y	DOT1L,GADD45B,GNG7	NA	NA	NA	NA	NA	GADD45B	71523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	2549602	2550221	2549903	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	GADD45B	75482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	2578988	2579272	2579256	Y	TMPRSS9	NA	NA	NA	NA	NA	GADD45B	104868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	2588002	2588286	2588143	Y	LINGO3,GNG7,DIRAS1	NA	NA	NA	NA	NA	GNG7	112421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2599036	2599584	2599134	Y	DOT1L,GADD45B	NA	NA	NA	NA	NA	GNG7	101123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2616819	2617162	2616940	Y	DOT1L,OAZ1,C19orf35,GADD45B	NA	NA	NA	NA	NA	GNG7	83545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	2621859	2622002	2621918	Y	DOT1L,OAZ1,C19orf35,GADD45B,TLE2	NA	NA	NA	NA	NA	GNG7	78705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	2664236	2664533	2664361	Y	SPPL2B,AES,GNG7	GNG7	NA	NA	NA	NA	GNG7	36174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	2685862	2686043	2685879	Y	NA	GNG7,DIRAS1	NA	NA	NA	NA	GNG7	14664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr19	2719845	2720284	2720049	Y	JSRP1,TLE6,AES,GNG7,DIRAS1	GNG7,DIRAS1,SLC39A3	NA	NA	NA	NA	DIRAS1	429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	2775891	2776162	2776129	Y	NA	SLC39A3,SGTA,THOP1,ZNF554	NA	NA	NA	NA	SGTA	5207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	2926811	2926963	2926923	Y	NA	ZNF57,ZNF77,TLE6	NA	NA	NA	NA	ZNF77	16006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	2950130	2950295	2950189	Y	NA	ZNF77,TLE6	THOP1,ZNF555,ZNF554,ZNF57,ZNF77,TLE6,AES,TLE2,GNA11,S1PR4,NCLN,GNA15,CELF5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF77	7161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	3035530	3035851	3035686	Y	NCLN,DOHH,DOHH,SLC39A3,SGTA,THOP1,TLE6,TLE2,TLE2	TLE2,AES	NA	NA	NA	NA	TLE2	9782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.442432249940863
chr19	3153392	3153939	3153476	Y	GNA15,FZR1	NCLN	NA	NA	NA	NA	NCLN	29622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	3154006	3154458	3154241	Y	GNA15,FZR1,S1PR4	NCLN	NA	NA	NA	NA	NCLN	29103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	3177322	3177366	3177344	Y	AES,S1PR4	NCLN	NA	NA	NA	NA	NCLN	6195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	3358221	3358724	3358471	Y	NA	NFIC	NA	NA	NA	NA	NFIC	660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	3360183	3360356	3360294	Y	TLE2,TLE2,TLE2,AES,CELF5,CELF5,MATK,FZR1,NFIC	NFIC	NA	NA	NA	NA	NFIC	2622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr19	3367171	3367852	3367502	Y	NFIC,NFIC	NFIC	NA	NA	NA	NA	NFIC	9610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	3387730	3388119	3388011	Y	NA	NFIC	NA	NA	NA	NA	NFIC	30169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	3397236	3397600	3397594	Y	NA	NFIC	NA	NA	NA	NA	NFIC	39675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr19	3398670	3398894	3398830	Y	NA	NFIC	NA	NA	NA	NA	NFIC	41109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15416287905734
chr19	3409586	3409938	3409796	Y	NA	NA	NA	NA	NA	NA	NFIC	52025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314896592331768
chr19	3552794	3553085	3553017	Y	GNA15,C19orf28	FZR1,HMG20B,MFSD12	NA	NA	NA	NA	HMG20B	17690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	4008398	4008778	4008498	Y	MATK,ZFR2,ATCAY	DAPK3,SNORD37,EEF2,PIAS4	NA	NA	NA	NA	PIAS4	2754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	4051584	4052099	4051914	Y	CCDC94	PIAS4,ZBTB7A	NA	NA	NA	NA	ZBTB7A	12844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr19	4052414	4052757	4052628	Y	CCDC94,ZBTB7A	PIAS4,ZBTB7A	NA	NA	NA	NA	ZBTB7A	12186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr19	4053092	4053572	4053301	Y	CCDC94,ZBTB7A	PIAS4,ZBTB7A	NA	NA	NA	NA	ZBTB7A	11371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	4057405	4058198	4058044	Y	CCDC94,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	6745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	4061318	4061457	4061400	Y	SEMA6B,PLIN5,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	3486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	4061604	4061945	4061775	Y	SEMA6B,PLIN5	ZBTB7A	NA	NA	NA	NA	ZBTB7A	2998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	4063699	4063930	4063813	Y	NA	ZBTB7A	NA	NA	NA	NA	ZBTB7A	1013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	4064475	4064868	4064603	Y	SEMA6B,CCDC94,ZBTB7A,SIRT6	ZBTB7A	NA	NA	NA	NA	ZBTB7A	75	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr19	4067781	4068111	4067963	Y	SEMA6B,ATCAY,ZBTB7A	ZBTB7A	NA	NA	NA	NA	ZBTB7A	2838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	4123124	4123351	4123249	Y	MATK,ZFR2,ATCAY	MAP2K2,CREB3L3	NA	NA	NA	NA	MAP2K2	998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr19	4375126	4375688	4375404	Y	NA	STAP2,MPND,SH3GL1,CHAF1A	NA	NA	NA	NA	SH3GL1	22856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	4379386	4379764	4379673	Y	NA	STAP2,MPND,SH3GL1,CHAF1A	NA	NA	NA	NA	SH3GL1	18780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	4381377	4381710	4381643	Y	NA	STAP2,MPND,SH3GL1,CHAF1A	NA	NA	NA	NA	SH3GL1	16834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr19	4393849	4394251	4394129	Y	NA	SH3GL1,CHAF1A	NA	NA	NA	NA	SH3GL1	4293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	4456035	4456301	4456168	Y	NA	UBXN6,HDGFRP2	NA	NA	NA	NA	UBXN6	216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	4456385	4456784	4456737	Y	UBXN6,UBXN6	UBXN6,HDGFRP2	NA	NA	NA	NA	UBXN6	566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr19	4567148	4567365	4567215	Y	TICAM1,SEMA6B	PLIN5,LRG1	NA	NA	NA	NA	LRG1	28662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	4567864	4568201	4568091	Y	CCDC94,TICAM1,KDM4B,SEMA6B	PLIN5,LRG1	NA	NA	NA	NA	LRG1	29378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	4584891	4584944	4584918	Y	NA	LRG1	EBI3,CCDC94,ANKRD24,TNFAIP8L1,C19orf10	IMR90	Hi-C	24141950	LRG1	46405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	4870294	4870493	4870397	Y	SEMA6B,TICAM1	TICAM1,PLIN3,UHRF1	NA	NA	NA	NA	PLIN3	4514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr19	4912030	4912419	4912247	Y	NA	PLIN3,UHRF1	NA	NA	NA	NA	UHRF1	10938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr19	4936813	4936840	4936828	Y	NA	UHRF1,KDM4B	NA	NA	NA	NA	KDM4B	30285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	5336072	5336705	5336347	Y	PTPRS	PTPRS	NA	NA	NA	NA	PTPRS	2109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	5624052	5624252	5624226	Y	VMAC,RFX2,DUS3L,SAFB2,SAFB	SAFB,SAFB2,RPL36	NA	NA	NA	NA	SAFB2	1995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.903275089520515
chr19	5829202	5829624	5829506	Y	NA	DUS3L,FUT6,FUT3	NA	NA	NA	NA	FUT6	8118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	5880679	5880918	5880789	Y	NA	FUT6,FUT3,FUT5,NDUFA11,VMAC,CAPS	NA	NA	NA	NA	FUT5	20880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr19	5953003	5953253	5953208	Y	SAFB2,FUT5	CAPS,RANBP3	NA	NA	NA	NA	RANBP3	22900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	5968077	5968307	5968208	Y	NA	RANBP3	NA	NA	NA	NA	RANBP3	7846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	6023211	6023679	6023440	Y	RFX2	RANBP3	NA	NA	NA	NA	RANBP3	47058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	6056849	6057757	6057360	Y	DENND1C,SAFB2,SAFB,VMAC,RFX2	NA	NA	NA	NA	NA	RANBP3	80696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	6108978	6109271	6109224	Y	NA	NA	NA	NA	NA	NA	RFX2	88312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	6189136	6189412	6189274	Y	NA	RFX2	NA	NA	NA	NA	RFX2	8171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	6238228	6238618	6238539	Y	RFX2	RFX2,MLLT1	NA	NA	NA	NA	MLLT1	39341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	6273754	6274259	6273940	Y	VAV1,GPR108,DENND1C,RFX2,MLLT1	MLLT1	NA	NA	NA	NA	MLLT1	3700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	6423549	6423953	6423663	Y	NA	GTF2F1,KHSRP,CRB3,SLC25A23	NA	NA	NA	NA	KHSRP	744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	6674780	6675150	6675080	Y	DENND1C,TNFSF9,VAV1,EMR1,TNFSF14	NA	NA	NA	NA	NA	C3	53423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	6708735	6709024	6708902	Y	C3	C3,GPR108,TRIP10	NA	NA	NA	NA	C3	19549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3794873199325
chr19	6738802	6739114	6738954	Y	NA	C3,GPR108,TRIP10,SH2D3A	NA	NA	NA	NA	TRIP10	2866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	7197339	7197547	7197388	Y	NA	NA	NA	NA	NA	NA	INSR	94498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	7254620	7254884	7254780	Y	NA	INSR	NA	NA	NA	NA	INSR	37161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	7665007	7665263	7665135	Y	INSR,PNPLA6,FLJ22184,KIAA1543	CAMSAP3,XAB2,STXBP2	NA	NA	NA	NA	CAMSAP3	6219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr19	7907381	7907869	7907475	Y	PNPLA6,PNPLA6,KIAA1543,FBN3,LASS4,EVI5L,FLJ22184,CTXN1	EVI5L,LRRC8E	NA	NA	NA	NA	EVI5L	14262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	8115456	8115774	8115631	Y	PRAM1,STXBP2,C19orf59	ELAVL1	NA	NA	NA	NA	ELAVL1	46913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	8226134	8226320	8226231	Y	NA	CERS4	FBN3,TIMM44	IMR90	Hi-C	24141950	CERS4	43300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.389349749334323
chr19	8272965	8273383	8273152	Y	NA	CERS4	NA	NA	NA	NA	CERS4	3345	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	8426850	8427217	8427032	Y	LOC645781,ANGPTL4	RPS28,NDUFA7,KANK3,ANGPTL4,RAB11B,MARCH2	NA	NA	NA	NA	ANGPTL4	677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	8488334	8488459	8488398	Y	PRAM1,MYO1F,MARCH2	RAB11B,MARCH2,HNRNPM	NA	NA	NA	NA	MARCH2	12180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	8488784	8489136	8488939	Y	PRAM1,MYO1F	RAB11B,MARCH2,HNRNPM	NA	NA	NA	NA	MARCH2	12630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	8674150	8674979	8674636	Y	ADAMTS10	MYO1F,ADAMTS10	NA	NA	NA	NA	ADAMTS10	530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.245540414243879
chr19	8749433	8750038	8749788	Y	PRAM1,MYO1F	NA	NA	NA	NA	NA	ADAMTS10	75813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr19	9402141	9402360	9402251	Y	NA	ZNF559	NA	NA	NA	NA	ZNF559	30088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	9420483	9420931	9420837	Y	NA	ZNF559	NA	NA	NA	NA	ZNF559	11517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr19	9733198	9733520	9733415	Y	NA	ZNF121,ZNF561	NA	NA	NA	NA	ZNF561	3123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	9748883	9749171	9749027	Y	OR7D4,OR7E24,ZNF559,ZNF559,ZNF559-ZNF177,ZNF177,ZNF177,ZNF426,ZNF846,OLFM2,ZNF562	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF561	18808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	9758216	9758505	9758322	Y	ZNF559,ZNF559,ZNF559-ZNF177,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	25271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	9776683	9777096	9776903	Y	OR7D4,ZNF559,ZNF559,ZNF559-ZNF177,ZNF177,ZNF426,ZNF121,ZNF846,OLFM2	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	6680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	9777343	9777681	9777659	Y	ZNF559,ZNF559,ZNF177,ZNF846	ZNF561,ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	6095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	9783821	9783976	9783959	Y	NA	ZNF562,RPS4XP22	NA	NA	NA	NA	ZNF562	45	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr19	9895815	9895899	9895870	Y	NA	FBXL12,UBL5,PIN1	NA	NA	NA	NA	FBXL12	40593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	9896233	9896620	9896495	Y	ZNF266,COL5A3,ZNF846	FBXL12,UBL5,PIN1	NA	NA	NA	NA	FBXL12	39872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.230421419789826
chr19	9937602	9937876	9937738	Y	NA	FBXL12,UBL5,PIN1	NA	NA	NA	NA	UBL5	1034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	9974094	9974487	9974263	Y	NA	FBXL12,UBL5,PIN1	NA	NA	NA	NA	PIN1	30161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	10056236	10056512	10056406	Y	ZNF846,COL5A3,OLFM2	NA	NA	NA	NA	NA	PIN1	112303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	10304383	10304612	10304534	Y	TYK2,KRI1,ILF3	S1PR2,DNMT1	PPAN-P2RY11,EIF3G	MCF7	ChIA-PET	22265404	S1PR2	35336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr19	10317020	10317257	10317138	Y	NA	S1PR2,DNMT1,MRPL4	DNMT1	IMR90	Hi-C	24141950	S1PR2	22691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	10346765	10347120	10347031	Y	TYK2,S1PR5,S1PR5,DNM2,ATG4D,ZNF846,FBXL12,C19orf66,PPAN,ICAM3	S1PR2,DNMT1,MRPL4,ICAM1,ICAM4	NA	NA	NA	NA	DNMT1	6803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	10349944	10350302	10350123	Y	NA	S1PR2,DNMT1,MRPL4,ICAM1,ICAM4,ICAM5	MRPL4,ICAM1	IMR90	Hi-C	24141950	DNMT1	9982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	10352370	10352740	10352555	Y	KRI1,ILF3,PPAN,RAVER1,MRPL4,DNMT1	S1PR2,DNMT1,MRPL4,ICAM1,ICAM4,ICAM5	MRPL4,ICAM1	IMR90	Hi-C	24141950	MRPL4	7837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	10513154	10513331	10513243	Y	ICAM1,DNM2,C19orf38,TYK2,PDE4A,PDE4A	TYK2,MIR1181	NA	NA	NA	NA	MIR1181	940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.181772841242931
chr19	10515339	10515636	10515481	Y	PDE4A,PDE4A	TYK2,MIR1181	NA	NA	NA	NA	MIR1181	3125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	10535896	10536533	10536178	Y	C19orf66,ICAM1,ICAM3,DNM2,C19orf38,TYK2,PDE4A,PDE4A	TYK2,MIR1181	NA	NA	NA	NA	MIR1181	23682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	10713789	10714290	10714179	Y	ICAM1,ICAM3,TYK2,PDE4A,DNM2,C19orf38,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,SLC44A2	KRI1,CDKN2D,SLC44A2,ILF3	NA	NA	NA	NA	SLC44A2	2656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	10766466	10766790	10766534	Y	NA	ILF3,QTRT1	NA	NA	NA	NA	ILF3	3529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	10842367	10842486	10842420	Y	ICAM1,ICAM3,TYK2,PDE4A,PDE4A,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,SLC44A2,C19orf38,DNM2	QTRT1,DNM2	NA	NA	NA	NA	DNM2	15612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	10925932	10926095	10926043	Y	ICAM3,TYK2,PDE4A,PDE4A,S1PR5,S1PR5,ATG4D,CDKN2D,CDKN2D,DNM2,C19orf38	TMED1	NA	NA	NA	NA	TMED1	18899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	11044199	11044446	11044323	Y	NA	YIPF2,C19orf52,SMARCA4	NA	NA	NA	NA	C19orf52	6790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	11202212	11202837	11202668	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	4174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.481218910693135
chr19	11202963	11203178	11203054	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	4925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	11205696	11206011	11205901	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	7658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr19	11206953	11207150	11207057	Y	ACP5,ACP5,DNM2,C19orf38,CCDC159,LDLR	LDLR	NA	NA	NA	NA	LDLR	8915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	11248443	11248964	11248826	Y	NA	SPC24	NA	NA	NA	NA	SPC24	15520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	11253262	11253482	11253341	Y	TMED1,CARM1,YIPF2,DOCK6	SPC24	NA	NA	NA	NA	SPC24	11002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15383135062983
chr19	11253991	11254271	11254206	Y	PRKCSH,ECSIT,TMED1,CARM1,YIPF2,DOCK6	SPC24	NA	NA	NA	NA	SPC24	10213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	11375157	11375492	11375297	Y	DOCK6	C19orf80,DOCK6	TSPAN16	MCF7	ChIA-PET	22265404	DOCK6	4000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	11484314	11484469	11484411	Y	ZNF439,ZNF653,ZNF627,ZNF491,ZNF441,ELAVL3,CCDC151,SMARCA4,SMARCA4	CCDC159,RAB3D,TMEM205,SWSAP1,EPOR,RGL3	NA	NA	NA	NA	SWSAP1	953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	11592904	11593323	11593025	Y	ZNF491,ZNF441,CCDC151,ELAVL3,ZNF653	PRKCSH,CCDC151,ZNF653,CTC-398G3.2,ECSIT	NA	NA	NA	NA	ZNF653	21415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	11601973	11602308	11602059	Y	ZNF491,ZNF441	ZNF653,CTC-398G3.2,ECSIT,CNN1	NA	NA	NA	NA	ZNF653	12430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	11671531	11671898	11671778	Y	LDLR,CCDC159	CTC-398G3.2,ECSIT,CNN1,ELOF1,ZNF627,ACP5	NA	NA	NA	NA	ZNF627	3342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	11679134	11679427	11679281	Y	CCDC159,ACP5,ACP5	CTC-398G3.2,ECSIT,CNN1,ELOF1,ZNF627,ACP5	NA	NA	NA	NA	ACP5	8396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	11804467	11804940	11804795	Y	ZNF878,ZNF823,ZNF491	HNRNPA1P10,ZNF823	NA	NA	NA	NA	HNRNPA1P10	28622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr19	11878639	11879058	11878901	Y	NA	ZNF823,ZNF441,ZNF491,ZNF440	NA	NA	NA	NA	ZNF441	2824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	11925678	11926080	11925867	Y	NA	ZNF441,ZNF491,ZNF440,ZNF439	NA	NA	NA	NA	ZNF440	2579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	12065633	12065838	12065735	Y	NA	ZNF700,ZNF763,CTD-2006C1.2	NA	NA	NA	NA	CTD-2006C1.2	30594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	12131760	12131812	12131786	Y	NA	CTD-2006C1.2,ZNF433,ZNF878,ZNF844	NA	NA	NA	NA	ZNF433	12744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	12261625	12261922	12261774	Y	NA	ZNF20,CTC-359D24.3,ZNF625,ZNF136	NA	NA	NA	NA	ZNF625	3624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	12270640	12270828	12270733	Y	NA	ZNF20,CTC-359D24.3,ZNF625,ZNF136	NA	NA	NA	NA	ZNF136	1051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr19	12404552	12404928	12404719	Y	ZNF791,ZNF564,ZNF490,WDR83,JUNB,ZNF700,ZNF763,ZNF136,ZNF799,ZNF443,ZNF563,ZNF44	CTD-2666L21.3,ZNF44,ZNF563	NA	NA	NA	NA	ZNF44	850	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.34258768656659
chr19	12427205	12427564	12427426	Y	NA	ZNF44,ZNF563,ZNF442	NA	NA	NA	NA	ZNF563	14970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	12844296	12844608	12844453	Y	NA	FBXW9,SNORD41,TNPO2,C19orf43,ASNA1	NA	NA	NA	NA	C19orf43	707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	12888910	12889352	12889266	Y	NA	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A	NA	NA	NA	NA	JUNB	10958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.70950341832552
chr19	12889371	12889726	12889619	Y	NA	C19orf43,ASNA1,JUNB,PRDX2,RNASEH2A	NA	NA	NA	NA	JUNB	10584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	12894545	12895330	12894818	Y	ZNF44,ZNF791,MAN2B1,C19orf43,DNASE2,JUNB	ASNA1,JUNB,PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	4980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	12899457	12901460	12900777	Y	NA	PRDX2,RNASEH2A,MAST1,RTBDN	NA	NA	NA	NA	JUNB	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.258031381975417
chr19	13006078	13006409	13006086	Y	NA	HOOK2,DNASE2,GCDH,SYCE2,FARSA,CALR,RAD23A	NA	NA	NA	NA	GCDH	6238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	13023589	13024232	13023881	Y	ZNF709,TNPO2,TNPO2,MAST1,DAND5	HOOK2,DNASE2,GCDH,SYCE2,FARSA,CALR,RAD23A,GADD45GIP1	NA	NA	NA	NA	SYCE2	3858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr19	13095998	13096573	13096246	Y	ZNF490,ZNF791,TNPO2,TNPO2,MAST1	CALR,RAD23A,GADD45GIP1,NFIX	NA	NA	NA	NA	NFIX	7849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	13123653	13124120	13123822	Y	WDR83,TNPO2,TNPO2,NFIX,CACNA1A	NFIX	NA	NA	NA	NA	NFIX	19231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	13137197	13137461	13137217	Y	NA	NFIX	NA	NA	NA	NA	NFIX	32775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	13143095	13143350	13143204	Y	WDR83,FBXW9,TNPO2,TNPO2	NFIX	NA	NA	NA	NA	NFIX	38673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	13164647	13164970	13164763	Y	NA	LYL1	NA	NA	NA	NA	LYL1	47005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr19	13171487	13171654	13171570	Y	NA	LYL1	NA	NA	NA	NA	LYL1	40321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr19	13188264	13188490	13188383	Y	ZNF490,PRDX2,KLF1,STX10,LYL1	LYL1,TRMT1,NACC1	NA	NA	NA	NA	LYL1	23485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	13238145	13238217	13238180	Y	NA	LYL1,TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	NACC1	11228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr19	13262107	13262928	13262695	Y	MAN2B1,C19orf43,JUNB	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	2878	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.20303269948316
chr19	13266326	13267156	13266576	Y	MAN2B1,C19orf43,JUNB,DNASE2,LYL1,STX10	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	7097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.474316548048537
chr19	13273540	13274187	13273840	Y	MAN2B1,C19orf43,JUNB,LYL1	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	14311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr19	13274586	13275096	13274696	Y	GADD45GIP1,NACC1	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	15357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	13275397	13275802	13275486	Y	NA	TRMT1,NACC1,STX10,IER2	NA	NA	NA	NA	IER2	16168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.781487623135923
chr19	13278382	13278991	13278445	Y	BEST2,JUNB,LYL1,STX10	STX10,IER2	NA	NA	NA	NA	IER2	19153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.635050261322964
chr19	13324184	13324516	13324349	Y	MAST1,CACNA1A	NA	NA	NA	NA	NA	IER2	64955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	13907523	13907866	13907763	Y	NA	MRI1,C19orf53,ZSWIM4	NA	NA	NA	NA	ZSWIM4	3249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	13944359	13944683	13944571	Y	CCDC130,RFX1,PRKACA,IL27RA,DCAF15	ZSWIM4	NA	NA	NA	NA	ZSWIM4	40085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.2623052062903
chr19	13954357	13954714	13954441	Y	NA	NA	NA	NA	NA	NA	ZSWIM4	50083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	13957204	13959386	13957586	Y	NA	NA	NA	NA	NA	NA	ZSWIM4	52930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.343329197509943
chr19	13972364	13973309	13972780	Y	CCDC130,RFX1,PRKACA,IL27RA,DCAF15,ZSWIM4	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	41705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	13975574	13976059	13975671	Y	CACNA1A,LPHN1,CC2D1A,C19orf57	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	38955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	13976745	13977653	13977105	Y	CACNA1A,RFX1,LPHN1,ZSWIM4,C19orf57	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	37361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr19	13995440	13995781	13995611	Y	NA	CC2D1A,C19orf57	NA	NA	NA	NA	CC2D1A	19233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	14084978	14085262	14085120	Y	NA	DCAF15,RFX1	NA	NA	NA	NA	DCAF15	23674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	14115648	14116111	14115801	Y	CCDC130,ZSWIM4,PKN1,DDX39A,CD97,DCAF15,RFX1,IL27RA	IL27RA	NA	NA	NA	NA	RFX1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	14172809	14173223	14173004	Y	NA	IL27RA,EEF1DP1,SAMD1	NA	NA	NA	NA	EEF1DP1	5931	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.42927008198442
chr19	14229419	14229865	14229637	Y	CCDC130,ZSWIM4,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,DDX39A,CD97	SAMD1,PRKACA,ASF1B	NA	NA	NA	NA	PRKACA	2523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280875893673852
chr19	14241315	14241555	14241521	Y	NA	SAMD1,PRKACA,ASF1B	NA	NA	NA	NA	ASF1B	4213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	14274504	14274771	14274661	Y	C19orf57,RFX1,LPHN1	PRKACA,ASF1B,LPHN1	NA	NA	NA	NA	ASF1B	28736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	14276845	14277176	14277145	Y	NA	PRKACA,ASF1B,LPHN1	NA	NA	NA	NA	ASF1B	31077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	14528800	14529217	14529142	Y	ZNF333,EMR2,DCAF15,RFX1,IL27RA,PKN1,DNAJB1,CD97,DDX39A	DDX39A,PKN1	NA	NA	NA	NA	DDX39A	608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	14545712	14545849	14545765	Y	NDUFB7,PKN1	DDX39A,PKN1,PTGER1	NA	NA	NA	NA	PKN1	3847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr19	14545997	14546246	14546106	Y	NA	DDX39A,PKN1,PTGER1	NA	NA	NA	NA	PKN1	4132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	14616908	14617174	14617017	Y	GIPC1	PTGER1,GIPC1,TECR,DNAJB1	GIPC1	MCF7	ChIA-PET	22265404	TECR	8723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	14661096	14661426	14661346	Y	NA	TECR,DNAJB1,NDUFB7	NA	NA	NA	NA	NDUFB7	19448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	14732511	14733275	14733016	Y	SYDE1	NA	NA	NA	NA	NA	NDUFB7	51637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151202812300115
chr19	15492858	15492952	15492905	Y	NA	AKAP8,AKAP8L	NA	NA	NA	NA	AKAP8	4249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	15666666	15666804	15666739	Y	NA	NA	NA	NA	NA	NA	PGLYRP2	58899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	15752781	15753122	15752960	Y	BRD4,AKAP8,RAB8A,HSH2D,CYP4F3	CYP4F3,CYP4F12	NA	NA	NA	NA	CYP4F3	3074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	15947617	15948119	15947980	Y	AKAP8,AKAP8L,RASAL3,OR10H3,OR10H4,RAB8A,KLF2,AP1M1	NA	NA	NA	NA	NA	CYP4F2	58811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.536278737319554
chr19	16181046	16181841	16181607	Y	OR10H2,OR10H3,OR10H4	TPM4,RAB8A	NA	NA	NA	NA	TPM4	5215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285972360981319
chr19	16188924	16190024	16189835	Y	TPM4	TPM4,RAB8A	NA	NA	NA	NA	TPM4	13093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.483355822850577
chr19	16193841	16194249	16194048	Y	NA	TPM4,RAB8A,HSH2D	NA	NA	NA	NA	TPM4	18010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	16205409	16205807	16205414	Y	EPS15L1,RAB8A,HSH2D	TPM4,RAB8A,HSH2D	NA	NA	NA	NA	RAB8A	14632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	16230487	16230565	16230516	Y	TPM4	RAB8A,HSH2D	NA	NA	NA	NA	RAB8A	10048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	16482225	16482879	16482589	Y	MED26,KLF2	KLF2	NA	NA	NA	NA	KLF2	48597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	16510195	16510544	16510471	Y	RAB8A,HSH2D,MED26,EPS15L1,KLF2	NA	NA	NA	NA	NA	EPS15L1	70352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	16560891	16561165	16561157	Y	NA	EPS15L1,CALR3,C19orf44	NA	NA	NA	NA	EPS15L1	19731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	16573693	16573897	16573763	Y	HSH2D	EPS15L1,CALR3,C19orf44	NA	NA	NA	NA	EPS15L1	6999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	16574808	16575111	16574962	Y	NA	EPS15L1,CALR3,C19orf44	NA	NA	NA	NA	EPS15L1	5785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	16704980	16705245	16705094	Y	KLF2,MED26	SLC35E1,MED26	NA	NA	NA	NA	SLC35E1	23787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	16772555	16772747	16772653	Y	NA	MED26,TMEM38A	NA	NA	NA	NA	TMEM38A	2617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	17200078	17200517	17200217	Y	MED26,FAM129C,HAUS8,MYO9B	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	15487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	17200566	17201240	17200825	Y	MED26,FAM129C,HAUS8,MYO9B	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	15975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr19	17208293	17208806	17208572	Y	NA	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	23702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr19	17218539	17219391	17218963	Y	MED26,HAUS8,MYO9B	HAUS8,MYO9B	NA	NA	NA	NA	MYO9B	33948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	17246297	17246722	17246423	Y	SLC27A1,PGLS,OCEL1,MYO9B	NA	NA	NA	NA	NA	MYO9B	61706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	17371801	17372164	17371849	Y	NXNL1,GTPBP3	USE1,OCEL1,NR2F6,BABAM1,USHBP1,MRPL34,DDA1,ABHD8	NR2F6	K562	ChIA-PET	22265404	BABAM1	3995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr19	17604234	17604409	17604322	Y	NA	TMEM221,SLC27A1,PGLS	NA	NA	NA	NA	PGLS	16029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	17667126	17667426	17667289	Y	MAP1S,ARRDC2,MYO9B,SLC27A1,PGLS,GLT25D1	PGLS	NA	NA	NA	NA	PGLS	46688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	17866765	17867157	17866984	Y	NA	MAP1S,FCHO1,B3GNT3	NA	NA	NA	NA	FCHO1	10238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	17961350	17961505	17961471	Y	FAM129C,FCHO1,FCHO1,IL12RB1,IFI30,ARRDC2,JAK3	JAK3,RPL18A	PLVAP,FAM125A,TMEM221,BST2,NXNL1,UNC13A,GLT25D1,FAM129C,MAP1S,FCHO1,INSL3,B3GNT3,JAK3,SLC5A5,KCNN1,RPL18A,CCDC124,ARRDC2	IMR90	Hi-C	24141950	JAK3	4470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	18131070	18131394	18131314	Y	FCHO1,PDE4C,ARRDC2,MAST3	ARRDC2	NA	NA	NA	NA	ARRDC2	21129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18133045	18133309	18133130	Y	FAM129C,MAP1S,FCHO1,FCHO1,LRRC25,IFI30,ELL,ARRDC2,ARRDC2	ARRDC2	NA	NA	NA	NA	ARRDC2	23104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.448020855027804
chr19	18162301	18162691	18162523	Y	NA	MAST3,IL12RB1	NA	NA	NA	NA	MAST3	43912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	18211545	18211814	18211678	Y	NA	MAST3,IL12RB1	NA	NA	NA	NA	IL12RB1	3791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	18214987	18215493	18215283	Y	NA	MAST3,IL12RB1,PIK3R2	NA	NA	NA	NA	IL12RB1	7233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	18264934	18265291	18265179	Y	NA	PIK3R2,IFI30,MPV17L2,RAB3A	NA	NA	NA	NA	PIK3R2	2966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr19	18315989	18316123	18316056	Y	NA	IFI30,MPV17L2,RAB3A	NA	NA	NA	NA	RAB3A	3105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	18393747	18393881	18393780	Y	NA	KIAA1683,JUND,MIR3188,LSM4	NA	NA	NA	NA	MIR3188	2860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr19	18402387	18403564	18402535	Y	JAK3,KCNN1,ARRDC2,ARRDC2,IL12RB1,MAST3,IFI30,SSBP4,LRRC25,KLHL26,ELL,CRTC1,C19orf60,JUND,PGPEP1	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	MIR3188	11500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	18404099	18404539	18404373	Y	NA	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	MIR3188	13212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18414244	18414595	18414365	Y	NA	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	17489	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.20617234029302
chr19	18415031	18416060	18415513	Y	JAK3,KCNN1,ARRDC2,ARRDC2,IL12RB1,SSBP4,KLHL26,ELL,C19orf60,JUND	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	16024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.448511969592877
chr19	18430446	18430898	18430653	Y	ARRDC2,IL12RB1,IFI30,LRRC25	KIAA1683,JUND,MIR3188,LSM4,PGPEP1	NA	NA	NA	NA	LSM4	1186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	18485152	18485556	18485412	Y	ARRDC2,ARRDC2,IFI30,ELL,LRRC25	PGPEP1,GDF15,LRRC25,SSBP4	NA	NA	NA	NA	GDF15	1611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.607440299137374
chr19	18497624	18497977	18497708	Y	PDE4C,GDF15	PGPEP1,GDF15,LRRC25,SSBP4,ISYNA1	NA	NA	NA	NA	LRRC25	8450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	18498524	18498706	18498615	Y	ARRDC2,IFI30,JUND	PGPEP1,GDF15,LRRC25,SSBP4,ISYNA1	NA	NA	NA	NA	LRRC25	7721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18504645	18504988	18504829	Y	UPF1,ARRDC2,ARRDC2,IL12RB1,IFI30,UBA52,ELL,LRRC25	GDF15,LRRC25,SSBP4,ISYNA1	NA	NA	NA	NA	LRRC25	1439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	18512599	18512849	18512719	Y	IFI30,UBA52,LRRC25	GDF15,LRRC25,SSBP4,ISYNA1	LRRC25	K562	ChIA-PET	22265404	LRRC25	6172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18527701	18528040	18527800	Y	KCNN1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,PGPEP1,LRRC25,SSBP4	GDF15,LRRC25,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	27	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.354997522248897
chr19	18528263	18528792	18528577	Y	UPF1,ARRDC2,ARRDC2,IFI30,PGPEP1,UBA52,C19orf60,LRRC25,SSBP4	GDF15,LRRC25,SSBP4,ISYNA1	NA	NA	NA	NA	SSBP4	589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr19	18589714	18590055	18589946	Y	UPF1,ARRDC2,ARRDC2,IL12RB1,IFI30,JUND,ELL,LRRC25	ISYNA1,ELL	NA	NA	NA	NA	ELL	40882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr19	18590516	18590939	18590817	Y	ARRDC2,ARRDC2,IFI30,ELL,LRRC25	ISYNA1,ELL	NA	NA	NA	NA	ELL	39998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	18625662	18626077	18625893	Y	UPF1,IL12RB1,IFI30,JUND,LRRC25,KLHL26,UBA52,FKBP8,ELL	ELL,FKBP8,KXD1	NA	NA	NA	NA	ELL	4860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr19	18630929	18631259	18631008	Y	UPF1,IFI30,JUND,PGPEP1,LRRC25,ELL	FKBP8,KXD1,UBA52	NA	NA	NA	NA	ELL	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr19	18631384	18632027	18631497	Y	ELL	ELL,FKBP8,KXD1,UBA52	NA	NA	NA	NA	ELL	447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr19	18722417	18722765	18722581	Y	GDF1,RAB3A,PDE4C,CRTC1,TMEM59L	UBA52,C19orf60,TMEM59L,CRLF1,KLHL26	NA	NA	NA	NA	CRLF1	5866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.520828214437991
chr19	18793678	18793914	18793817	Y	PDE4C	KLHL26,CRTC1	NA	NA	NA	NA	CRTC1	1191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18810961	18811220	18811091	Y	NA	CRTC1	NA	NA	NA	NA	CRTC1	18474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	18852715	18852875	18852814	Y	GDF1,GDF15	COMP	NA	NA	NA	NA	COMP	47248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr19	19005223	19006062	19005586	Y	TMEM59L,KLHL26,CRTC1,SUGP2,SLC25A42,NCAN,HAPLN4,HOMER3,HOMER3,GDF1	GDF1,COPE,DDX49,HOMER3	NA	NA	NA	NA	CERS1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	19027750	19028071	19027900	Y	MAU2	GDF1,CERS1,COPE,DDX49,HOMER3	NA	NA	NA	NA	COPE	135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	19143307	19143510	19143378	Y	DDX49,SUGP1,NR2C2AP,SUGP2,ARMC6	ARMC6,SUGP2,SLC25A42	NA	NA	NA	NA	SUGP2	475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	19248225	19248392	19248286	Y	NA	TMEM161A	NA	NA	NA	NA	TMEM161A	903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	19248583	19248716	19248628	Y	NA	TMEM161A	NA	NA	NA	NA	TMEM161A	1261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	19432213	19432594	19432445	Y	SUGP2,NCAN,ZNF14,PBX4,SUGP1,MAU2	MAU2,SUGP1	NA	NA	NA	NA	SUGP1	2560	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr19	19483893	19484092	19484012	Y	NA	GATAD2A	NA	NA	NA	NA	GATAD2A	10543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264111101627431
chr19	19488658	19488936	19488750	Y	NA	GATAD2A	NA	NA	NA	NA	GATAD2A	5699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	19504149	19504345	19504247	Y	NA	GATAD2A	NA	NA	NA	NA	GATAD2A	9514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	19570650	19571032	19570761	Y	ZNF506,RFXANK,MAU2,GATAD2A,ZNF14,PBX4,GMIP	NA	NA	NA	NA	NA	NDUFA13	53513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	19571175	19572073	19571752	Y	ZNF506,RFXANK,MAU2,GATAD2A,ZNF14,PBX4,GMIP	NA	NA	NA	NA	NA	NDUFA13	52472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	19600012	19600395	19600260	Y	RFXANK,MAU2,GATAD2A,PBX4,GMIP	NDUFA13,TSSK6,YJEFN3,CILP2	NA	NA	NA	NA	NDUFA13	24150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	19623798	19624201	19624001	Y	NA	NDUFA13,TSSK6,YJEFN3,CILP2	NA	NA	NA	NA	NDUFA13	344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	19866097	19866485	19866349	Y	TSSK6	ZNF14	NA	NA	NA	NA	ZNF14	24191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	19977247	19977754	19977315	Y	PBX4,LPAR2,ZNF101,ZNF14,ZNF682,ZNF682,ZNF506,ZNF253	ZNF506,ZNF253,ZNF93	NA	NA	NA	NA	ZNF253	2552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	20128543	20128860	20128736	Y	NA	ZNF682	NA	NA	NA	NA	ZNF682	19455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	20162886	20163252	20163139	Y	ZNF506,ZNF253,ZNF682,ZNF682	ZNF682,ZNF90,AC006539.2	ZNF682,LOC284440	MCF7	ChIA-PET	22265404	ZNF682	14571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	20337633	20337845	20337749	Y	ZNF93,ZNF682,ZNF682,ZNF90,ZNF486	NA	NA	NA	NA	NA	ZNF486	61596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	20747496	20747853	20747738	Y	NA	ZNF737	NA	NA	NA	NA	ZNF737	881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	21689202	21689645	21689487	Y	ZNF430,ZNF708,ZNF493,ZNF100,ZNF429	ZNF429	NA	NA	NA	NA	ZNF429	11718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr19	23416597	23416606	23416602	Y	NA	ZNF724P	NA	NA	NA	NA	ZNF724P	14586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	23425915	23426300	23426108	Y	NA	ZNF724P	NA	NA	NA	NA	ZNF724P	4892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	23530488	23530791	23530760	Y	NA	ZNF91	NA	NA	NA	NA	ZNF91	45571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr19	24216985	24217321	24217111	Y	ZNF254	ZNF254	NA	NA	NA	NA	ZNF254	2709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	28219787	28220540	28220091	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1481908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	28232492	28232748	28232631	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1469700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	28252106	28252716	28252616	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1449732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	28270762	28271411	28271062	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1431037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	28278661	28279931	28279051	Y	NA	NA	NA	NA	NA	NA	UQCRFS1	1422517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	29702850	29703471	29703365	Y	NA	UQCRFS1	NA	NA	NA	NA	UQCRFS1	402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	30157267	30157499	30157417	Y	PLEKHF1,C19orf12,C19orf12	PLEKHF1,C19orf12	NA	NA	NA	NA	PLEKHF1	3304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	30206961	30207337	30207149	Y	NA	C19orf12	NA	NA	NA	NA	C19orf12	2597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr19	30207596	30207744	30207670	Y	NA	C19orf12	NA	NA	NA	NA	C19orf12	3232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	30336581	30336824	30336781	Y	C19orf2,C19orf2	CCNE1	NA	NA	NA	NA	CCNE1	35776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr19	30447917	30448294	30448014	Y	NA	URI1	NA	NA	NA	NA	URI1	35366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr19	31841682	31842327	31842237	Y	NA	NA	NA	NA	NA	NA	ZNF507	992173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	32863977	32864267	32864121	Y	NA	ZNF507,DPY19L3	NA	NA	NA	NA	ZNF507	29477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	33532238	33532582	33532339	Y	RHPN2,GPATCH1,PDCD5,ANKRD27,NUDT19,CEP89,C19orf40	RHPN2,GPATCH1	NA	NA	NA	NA	RHPN2	21212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.420902007407286
chr19	33538325	33538659	33538479	Y	RHPN2,GPATCH1,NUDT19,CEP89,C19orf40	RHPN2,GPATCH1	NA	NA	NA	NA	RHPN2	15135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	33664629	33664677	33664651	Y	NA	LRP3	NA	NA	NA	NA	LRP3	1832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	33668108	33668528	33668227	Y	SLC7A10,LRP3	LRP3,SLC7A10	NA	NA	NA	NA	LRP3	1599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	33740333	33740640	33740371	Y	NA	SLC7A10	CHST8,CEBPA,LOC80054,PEPD	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC7A10	25577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.240774963756723
chr19	33758723	33759220	33758755	Y	CEBPG,CEBPA	SLC7A10,CEBPA	CEBPA,LOC80054,PEPD,CEBPG,CHST8	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CEBPA	32250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	33764887	33765213	33765153	Y	CEBPG,CEBPA	CEBPA	CEBPA,LOC80054,CHST8,PEPD	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CEBPA	26257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	33769544	33769942	33769761	Y	CEBPA	CEBPA	NA	NA	NA	NA	CEBPA	21528	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.662660223508556
chr19	33784292	33784447	33784359	Y	CEBPG,CEBPA	CEBPA	NA	NA	NA	NA	CEBPA	7023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr19	33789888	33790286	33790087	Y	NA	CEBPA	NA	NA	NA	NA	CEBPA	1184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	33796303	33796393	33796348	Y	SLC7A9,CEBPA	CEBPA	NA	NA	NA	NA	CEBPA	4833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.344152352109727
chr19	33875552	33875576	33875564	Y	NA	CEBPG	NA	NA	NA	NA	CEBPG	13316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	33888059	33888360	33888231	Y	CEBPA	CEBPG	NA	NA	NA	NA	CEBPG	25823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.927102341956297
chr19	33894583	33894808	33894696	Y	CEBPA	CEBPG	NA	NA	NA	NA	CEBPG	32347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268384925942314
chr19	33996867	33997517	33996997	Y	LRP3	PEPD	NA	NA	NA	NA	PEPD	13183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr19	34625713	34625998	34625854	Y	PDCD2L	LSM14A	CEBPA,LOC80054,KCTD15,CHST8,UBA2,KIAA0355,LRP3,SLC7A10,WDR88,LSM14A,PEPD	IMR90	Hi-C	24141950	LSM14A	35411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.373407600280486
chr19	34850085	34850642	34850351	Y	ZNF599,ZNF302,ZNF181	GPI,PDCD2L	NA	NA	NA	NA	GPI	1700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr19	34874880	34875495	34875019	Y	NA	GPI,PDCD2L,UBA2	NA	NA	NA	NA	PDCD2L	17794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	35453242	35453666	35453504	Y	ZNF792	ZNF30,ZNF792,GRAMD1A	NA	NA	NA	NA	ZNF792	289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	35491833	35492367	35492256	Y	FFAR3,FFAR2,USF2,FXYD5,FXYD5,FXYD5,GRAMD1A	ZNF792,GRAMD1A,SCN1B,HPN	NA	NA	NA	NA	GRAMD1A	8145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr19	35494139	35494542	35494364	Y	NA	ZNF792,GRAMD1A,SCN1B,HPN	NA	NA	NA	NA	GRAMD1A	10451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.362722527886078
chr19	35557782	35557965	35557875	Y	MAG,SCGBL,ZNF302,ZNF181,ZNF30,HPN,LGI4	SCN1B,HPN,FXYD3	NA	NA	NA	NA	HPN	28372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	35696373	35696472	35696417	Y	FFAR1,CD22,USF2	LSR	NA	NA	NA	NA	LSR	40761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	35781724	35782082	35781902	Y	SCN1B,HPN,LGI4,FXYD1,FXYD7,MAG,ARHGAP33	LSR,USF2,HAMP,MAG	NA	NA	NA	NA	MAG	696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	35806837	35807076	35807010	Y	NA	USF2,HAMP,MAG	NA	NA	NA	NA	MAG	25809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr19	35808532	35808711	35808557	Y	GRAMD1A,FXYD5,FXYD5,FXYD5,USF2,FFAR2,U2AF1L4,IGFLR1,FFAR3	HAMP,MAG	NA	NA	NA	NA	MAG	27504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	35809679	35810380	35810036	Y	GRAMD1A,FXYD5,FXYD5,FXYD5,USF2,FFAR2,U2AF1L4,IGFLR1,FFAR3	HAMP,MAG	NA	NA	NA	NA	MAG	28651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr19	35880330	35880634	35880484	Y	ZNF792,FXYD5,FXYD5,FXYD5,USF2,CD22	NA	NA	NA	NA	NA	MAG	99302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr19	36100762	36101128	36100979	Y	FXYD5,FXYD5,FXYD5,USF2,CD22,FFAR1,ZBTB32,U2AF1L4,NFKBID,IGFLR1,HCST	HAUS5,RBM42,ETV2,COX6B1	HAUS5	K562	ChIA-PET	22265404	HAUS5	518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	36135988	36136183	36136108	Y	ARHGAP33	HAUS5,RBM42,ETV2,COX6B1,UPK1A-AS1	NA	NA	NA	NA	COX6B1	942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.156459888959544
chr19	36193251	36193562	36193412	Y	USF2,CD22,FFAR1,HAUS5,ETV2,WDR62,HCST,ZBTB32,U2AF1L4,MLL4,IGFLR1,ARHGAP33	UPK1A-AS1,IGFLR1,PSENEN,U2AF1L4,LIN37	MLL4,ZBTB32	K562	ChIA-PET	22265404	UPK1A-AS1	31058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.228775622197458
chr19	36448313	36448413	36448320	Y	ZNF565,ZNF565,ZFP14,APLP1	LRFN3,SDHAF1	NA	NA	NA	NA	LRFN3	24053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	36449882	36450230	36450084	Y	NA	LRFN3,SDHAF1	NA	NA	NA	NA	LRFN3	25622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	36519340	36519516	36519376	Y	ZNF565	SDHAF1,ALKBH6,THAP8,WDR62	NA	NA	NA	NA	ALKBH6	16199	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr19	36618643	36619171	36618835	Y	NA	TBCB,POLR2I,CAPNS1	NA	NA	NA	NA	CAPNS1	9306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr19	36720266	36720641	36720459	Y	ARHGAP33,APLP1,CLIP3,CLIP3,ZNF566,ZNF566,ZNF529,ZNF382,ZNF260,ZFP14,ZNF565,ZNF565	ZNF146,ZNF565	NA	NA	NA	NA	ZNF565	14518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	36757480	36757645	36757542	Y	NA	ZNF565	ZNF146	IMR90	Hi-C	24141950	ZNF565	22321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	37246589	37246720	37246657	Y	NA	ZNF850	NA	NA	NA	NA	ZNF850	15007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	37795242	37795359	37795301	Y	ZNF790,ZNF345,ZNF345,ZNF345,ZNF829,ZNF568,ZNF420,ZNF585B,ZNF793,ZNF781,ZNF607,ZNF607,ZNF573,ZNF570,ZNF569,ZNF540,ZNF527,HKR1	HKR1	NA	NA	NA	NA	HKR1	6380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	37942009	37942313	37942161	Y	ZNF420,ZNF585B,ZNF527,ZNF781,ZNF607,ZNF607,ZNF573,ZNF571,ZNF540,ZNF540,ZFP30,ZNF793,ZNF570,ZNF569	ZNF570,ZNF569	NA	NA	NA	NA	ZNF570	14174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	37953316	37953327	37953324	Y	NA	ZNF570,ZNF569,ZNF793	NA	NA	NA	NA	ZNF570	3160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	38433320	38433698	38433507	Y	ZNF569,ZNF570,ZNF793,ZFP30,ZNF607,ZNF607,ZNF573,DPF1,DPF1	WDR87,SIPA1L3	NA	NA	NA	NA	SIPA1L3	37452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	38470537	38470671	38470619	Y	NA	NA	NA	NA	NA	NA	SIPA1L3	74669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	38482400	38482784	38482644	Y	NA	NA	NA	NA	NA	NA	SIPA1L3	86532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	38717073	38717581	38717079	Y	NA	DPF1	NA	NA	NA	NA	DPF1	773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	39148533	39148920	39148613	Y	C19orf33,FAM98C,PAPL,ACTN4	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	12244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	39149253	39149575	39149354	Y	SPINT2,C19orf33,PAK4,ACTN4	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	12964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr19	39152764	39152958	39152839	Y	NA	EIF3K,ACTN4	NA	NA	NA	NA	ACTN4	16475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	39167742	39168127	39167771	Y	NA	ACTN4	NA	NA	NA	NA	ACTN4	31453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	39175000	39175365	39175141	Y	NFKBIB,HNRNPL,EIF3K	ACTN4	NA	NA	NA	NA	ACTN4	38711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	39177340	39177518	39177421	Y	RASGRP4,NFKBIB,HNRNPL	ACTN4	NA	NA	NA	NA	ACTN4	41051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	39184148	39184440	39184342	Y	C19orf33,PSMD8,PAK4,MRPS12,MRPS12,FBXO27,ACTN4	ACTN4	NA	NA	NA	NA	ACTN4	47859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	39411140	39411539	39411467	Y	LGALS7	RINL,NFKBIB,SIRT2,MRPS12,SARS2	NA	NA	NA	NA	MRPS12	7649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	39453898	39453904	39453901	Y	NA	MRPS12,SARS2,FBXO17	NA	NA	NA	NA	FBXO17	10646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr19	39564346	39564568	39564426	Y	ZFP36,HNRNPL,NFKBIB	FBXO27,PAK4	PAPL,SAMD4B,GMFG,LRFN1	IMR90	Hi-C	24141950	FBXO27	42921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	39621407	39621638	39621523	Y	NA	PAK4	NA	NA	NA	NA	PAK4	6997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	39831946	39832143	39832027	Y	NA	GMFG,SAMD4B,PAF1,MED29	NA	NA	NA	NA	SAMD4B	910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	39891902	39892845	39892340	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,SUPT5H,SUPT5H,RPS16,PLEKHG2	PAF1,MED29,ZFP36,MIR4530,PLEKHG2,RPS16,SUPT5H	NA	NA	NA	NA	ZFP36	2608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.820114186143433
chr19	39921308	39921946	39921495	Y	GMFG,SAMD4B,PAF1,MED29,ZFP36,PLEKHG2	PAF1,MED29,ZFP36,MIR4530,PLEKHG2,RPS16,SUPT5H,TIMM50	NA	NA	NA	NA	RPS16	2642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	40315090	40315548	40315357	Y	NA	DYRK1B,FBL	NA	NA	NA	NA	DYRK1B	7293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.152517081464972
chr19	40441958	40442162	40442060	Y	FCGBP	CTC-471F3.4,PSMC4,ZNF546	NA	NA	NA	NA	CTC-471F3.4	5472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	40751869	40752087	40752041	Y	NA	CNTD2,AKT2	NA	NA	NA	NA	CNTD2	21272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	40823184	40823546	40823487	Y	NA	AKT2,PLD3,C19orf47	NA	NA	NA	NA	PLD3	28817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr19	40939716	40940068	40940022	Y	SERTAD1	PRX,SERTAD1,SERTAD3,BLVRB,SPTBN4	NA	NA	NA	NA	SERTAD3	8544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280384267501579
chr19	40942693	40943017	40942855	Y	NA	PRX,SERTAD1,SERTAD3,BLVRB,SPTBN4	NA	NA	NA	NA	SERTAD3	5595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	41109606	41110134	41110046	Y	SERTAD1,ITPKC,EGLN2,EGLN2,C19orf54,ADCK4,SHKBP1	SHKBP1	NA	NA	NA	NA	SHKBP1	28849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	41169097	41169273	41169245	Y	NA	NA	NA	NA	NA	NA	ITPKC	51735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	41254580	41254859	41254762	Y	SHKBP1,ADCK4	ITPKC,ADCK4,SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	SNRPA	38	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	41267029	41267391	41267210	Y	NA	ITPKC,ADCK4,SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	MIA	8162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr19	41289050	41289265	41289158	Y	SERTAD3,SHKBP1,ADCK4,RAB4B,EGLN2,EGLN2	SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	RAB4B	6929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	41304071	41304255	41304136	Y	SERTAD1,SERTAD3,SHKBP1,ADCK4,ADCK4,RAB4B,HNRNPUL1	SNRPA,C19orf54,MIA,RAB4B,EGLN2	NA	NA	NA	NA	EGLN2	1170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	41681944	41682199	41682187	Y	NA	RPL36P16,CYP2S1,AXL	CYP2B7P1,HNRNPUL1,CYP2A13,CYP2F1,CCDC97,BCKDHA,B3GNT8	IMR90	Hi-C	24141950	RPL36P16	8178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.523456752767706
chr19	41729438	41729579	41729517	Y	ATP5SL,ATP5SL,AXL	CYP2S1,AXL,HNRNPUL1	NA	NA	NA	NA	AXL	6330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr19	41731541	41731893	41731762	Y	NA	CYP2S1,AXL,HNRNPUL1	NA	NA	NA	NA	AXL	8433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr19	41771602	41771660	41771636	Y	CEACAM4,CEACAM21,RAB4B,EGLN2,EGLN2,TMEM91,TMEM91,TGFB1,B9D2,HNRNPUL1	AXL,HNRNPUL1,CCDC97	NA	NA	NA	NA	HNRNPUL1	5201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.485492735008018
chr19	41795419	41795640	41795447	Y	CYP2A13,B9D2,HNRNPUL1	HNRNPUL1,CCDC97	NA	NA	NA	NA	CCDC97	18454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	41804006	41804567	41804366	Y	TGFB1,B9D2,HNRNPUL1	HNRNPUL1,CCDC97	NA	NA	NA	NA	CCDC97	9527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	41827649	41828097	41827915	Y	HNRNPUL1,TGFB1,B9D2	CCDC97,TMEM91,TGFB1,B9D2	NA	NA	NA	NA	CCDC97	13555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	41915515	41915996	41915671	Y	ARHGEF1,HNRNPUL1,TGFB1	B9D2,BCKDHA,EXOSC5,B3GNT8,ATP5SL,C19orf69	NA	NA	NA	NA	EXOSC5	14131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr19	42028325	42028365	42028354	Y	NA	NA	CEACAM7,LOC100505495,C19orf69,ATP5SL,CEACAM21	IMR90	Hi-C	24141950	C19orf69	81262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr19	42037922	42038313	42037990	Y	CCDC97,TGFB1,B9D2,TMEM91,CEACAM4,CEACAM21,ARHGEF1	NA	LOC100505495	IMR90	Hi-C	24141950	C19orf69	90859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	42303520	42303673	42303597	Y	TGFB1,TMEM91,B9D2,TMEM91,CEACAM21,CEACAM4,ERF,DEDD2,ARHGEF1,CEACAM3	NA	NA	NA	NA	NA	RPS19	58315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	42404902	42404963	42404932	Y	NA	RPS19,CD79A,ARHGEF1	NA	NA	NA	NA	ARHGEF1	19674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	42430880	42431141	42430883	Y	NA	ARHGEF1,RABAC1	NA	NA	NA	NA	RABAC1	30401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	42444727	42445027	42444981	Y	NA	RABAC1	NA	NA	NA	NA	RABAC1	16515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr19	42710307	42710321	42710316	Y	NA	POU2F2,DEDD2,ZNF526,GSK3A,ERF	NA	NA	NA	NA	POU2F2	11570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	42772295	42772768	42772477	Y	NA	ZNF526,GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	1606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.448020855027804
chr19	42772804	42773312	42773020	Y	CEACAM3,LYPD4,DMRTC2,ZNF574,DEDD2,LIPE	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	2115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr19	42774379	42774759	42774668	Y	CEACAM8,CEACAM3,ARHGEF1,ZNF574,POU2F2,DEDD2,ERF,CIC	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	POU2F2,LOC100505622,MIR4323	IMR90	Hi-C	24141950	CIC	3690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr19	42775992	42776735	42776352	Y	NA	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145	NA	NA	NA	NA	CIC	5303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268876552114587
chr19	42784087	42784212	42784170	Y	CEACAM8,CEACAM3,DEDD2	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	42784527	42784991	42784716	Y	ATP1A3,GRIK5,ZNF574,ZNF526,GSK3A,TMEM145,PRR19,PAFAH1B3,PAFAH1B3,PAFAH1B3,MEGF8	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	13838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.878293665664639
chr19	42785500	42785936	42785827	Y	NA	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	CIC	14811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.368802247538092
chr19	42789863	42790090	42789919	Y	CEACAM8,CEACAM3,ARHGEF1,DEDD2,CIC	GSK3A,ERF,CIC,PRR19,PAFAH1B3,TMEM145,MEGF8	NA	NA	NA	NA	PRR19	14160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	42948068	42948265	42948167	Y	NA	NA	NA	NA	NA	NA	CEACAM1	115121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr19	42954515	42954747	42954627	Y	CEACAM1,LIPE	NA	CXCL17	IMR90	Hi-C	24141950	CEACAM1	108639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	43124353	43124394	43124374	Y	NA	NA	CXCL17,TEX101,PSG3	IMR90	Hi-C	24141950	CEACAM1	60967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	44032541	44032939	44032740	Y	NA	PHLDB3,ZNF575,ETHE1,XRCC1	NA	NA	NA	NA	ETHE1	3145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	44137942	44138031	44138016	Y	ZNF575,ZNF221,LYPD5,ZNF428,CADM4	IRGQ,ZNF576,SRRM5,ZNF428,CADM4,PLAUR	NA	NA	NA	NA	CADM4	3960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	44139252	44139636	44139395	Y	ZNF575,ZNF284,ZNF225,ZNF224,ZNF223,ZNF221,LYPD5,IRGQ,CADM4	IRGQ,ZNF576,SRRM5,ZNF428,CADM4,PLAUR	NA	NA	NA	NA	CADM4	2355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.359271346563779
chr19	44287065	44287299	44287223	Y	NA	SMG9,KCNN4,ZNF283	NA	NA	NA	NA	KCNN4	3656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	44711538	44711905	44711597	Y	NA	ZNF226,ZNF227,ZNF233	NA	NA	NA	NA	ZNF227	1838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr19	44749585	44749846	44749685	Y	LYPD5,ZNF221,ZNF223,ZNF284,ZNF224,ZNF234,ZNF226,ZNF226,ZNF226,ZNF285,ZNF229,ZFP112,ZNF227,ZNF235,ZNF233,ZNF233	ZNF227,ZNF233	NA	NA	NA	NA	ZNF233	2472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	44773096	44773391	44773244	Y	LYPD5,ZNF221,ZNF284,ZNF224,ZNF234,ZNF226,ZNF226,ZNF226,ZNF285,ZFP112,ZNF227,ZNF233,ZNF233,ZNF235	ZNF233,ZNF235	NA	NA	NA	NA	ZNF233	20778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	45100230	45100376	45100298	Y	NA	IGSF23,PVR	CEACAM16,TOMM40,PVR,MIR4531,IGSF23	IMR90	Hi-C	24141950	IGSF23	14564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	45129392	45129792	45129578	Y	PVRL2,GEMIN7,GEMIN7,PVR	IGSF23,PVR	NA	NA	NA	NA	IGSF23	14452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	45195366	45195649	45195556	Y	RELB,CLASRP,BCL3	NA	NA	NA	NA	NA	PVR	50268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	45221919	45222313	45222185	Y	NA	BCL3	NA	NA	NA	NA	BCL3	26649	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.32687594597596
chr19	45225441	45225906	45225728	Y	RELB,CLASRP,BCL3	BCL3	NA	NA	NA	NA	BCL3	23056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	45228436	45228775	45228695	Y	IGSF23,RELB,APOE,APOC4,APOC2,BCL3	BCL3	NA	NA	NA	NA	BCL3	20187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.392800930656622
chr19	45242034	45242469	45242251	Y	RELB,CLASRP,BCL3	BCL3,CBLC	BCL3	K562	ChIA-PET	22265404	BCL3	6493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	45248499	45249479	45248793	Y	NA	CBLC	NA	NA	NA	NA	BCL3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	45350775	45351289	45350997	Y	BCL3,PVRL2,RELB	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	3343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr19	45352107	45352544	45352311	Y	NA	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	4675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	45352951	45353140	45353112	Y	NA	BCAM,PVRL2,TOMM40	NA	NA	NA	NA	PVRL2	5519	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	45393623	45393866	45393750	Y	ZNF285,ZNF180,GEMIN7,GEMIN7,CLASRP,TOMM40	PVRL2,TOMM40,APOE,APOC1,APOC1P1	NA	NA	NA	NA	TOMM40	1797	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.47488930627004
chr19	45427550	45427884	45427705	Y	IGSF23,APOE,APOC1,APOC4,APOC2	TOMM40,APOE,APOC1,APOC1P1,APOC2,CLPTM1	NA	NA	NA	NA	APOC1P1	177	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.17379743922747
chr19	45601584	45601804	45601678	Y	FOSB	ZNF296,GEMIN7,MARK4,PPP1R37	NA	NA	NA	NA	PPP1R37	8930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	45616872	45617353	45617125	Y	NA	ZNF296,GEMIN7,MARK4,PPP1R37	NA	NA	NA	NA	PPP1R37	24218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	45755637	45756189	45755812	Y	RELB,CLASRP,VASP	NA	NA	NA	NA	NA	CKM	68046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	45879605	45879880	45879744	Y	NA	KLC3,ERCC2,CD3EAP,PPP1R13L	NA	NA	NA	NA	ERCC2	7429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	45931993	45932316	45932152	Y	GIPR,RELB,CLASRP,VASP,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1	NA	NA	NA	NA	PPP1R13L	24386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	45943163	45943490	45943268	Y	GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	ERCC1,PPM1N,RTN2,VASP,FOSB,CD3EAP,PPP1R13L	K562,MCF7	ChIA-PET	22265404	FOSB	25763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	45946690	45947113	45946759	Y	GIPR,RELB,CLASRP,VASP,PPP1R13L,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N	ERCC1,VASP,FOSB,RTN2,LOC100287177,EML2	K562,MCF7	ChIA-PET	22265404	FOSB	22140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr19	45952039	45952594	45952534	Y	GIPR,RELB,CLASRP,PPM1N,FOSB	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	16659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	45953764	45954783	45954182	Y	NA	CD3EAP,PPP1R13L,FOSB,ERCC1,PPM1N,RTN2	FOSB,VASP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSB	14470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr19	45959420	45959846	45959631	Y	GIPR,RELB,CLASRP,BLOC1S3,VASP,FOSB	FOSB,ERCC1,PPM1N,RTN2,VASP	FOSB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FOSB	9407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	46011701	46012269	46011904	Y	FBXO46,CLASRP,ZNF296,VASP	FOSB,ERCC1,PPM1N,RTN2,VASP	NA	NA	NA	NA	VASP	3864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206754265098808
chr19	46012498	46012899	46012640	Y	FBXO46,CLASRP,ZNF296,BLOC1S3,VASP	FOSB,ERCC1,PPM1N,RTN2,VASP	NA	NA	NA	NA	VASP	4661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.699640988923696
chr19	46361761	46362096	46361929	Y	NA	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	SYMPK	2452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	46379598	46379943	46379895	Y	NA	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	IRF2BP1	7433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314896592331768
chr19	46385401	46385465	46385433	Y	NA	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	IRF2BP1	1911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr19	46386037	46386278	46386146	Y	OPA3,GIPR,FBXO46,SYMPK,FOXA3	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	IRF2BP1	1098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.629302070098462
chr19	46398825	46399093	46398978	Y	EML2,EML2	SYMPK,FOXA3,IRF2BP1,MYPOP	NA	NA	NA	NA	MYPOP	4769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.602674848650217
chr19	46683956	46684315	46684191	Y	NA	IGFL2	NA	NA	NA	NA	IGFL2	39593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	46803943	46804533	46804229	Y	IRF2BP1,MYPOP,HIF3A,HIF3A,HIF3A,CCDC8	PPP5C	NA	NA	NA	NA	PPP5C	43718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	46905606	46905628	46905621	Y	NA	NA	NA	NA	NA	NA	PPP5C	57355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	46907328	46907649	46907570	Y	NA	NA	NA	NA	NA	NA	PPP5C	59077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.951592651247101
chr19	46930027	46930174	46930086	Y	NA	PNMAL1	CCDC8,LOC100506012	IMR90	Hi-C	24141950	PNMAL1	42646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	47062362	47062544	47062453	Y	NA	GAPDHP38,CALM3	NA	NA	NA	NA	GAPDHP38	2464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	47220951	47221042	47220998	Y	ZC3H4,PRKD2	PRKD2,FKRP,STRN4	NA	NA	NA	NA	PRKD2	2567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	47234783	47235117	47235027	Y	PTGIR,ZC3H4,PRKD2,STRN4	PRKD2,FKRP,STRN4	NA	NA	NA	NA	FKRP	12186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	47269374	47269772	47269575	Y	LOC100506012,SLC1A5,SLC1A5	FKRP,STRN4,SLC1A5	NA	NA	NA	NA	SLC1A5	20079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	47363167	47364689	47363471	Y	PNMAL1,PNMAL2,LOC100506012,CALM3,DACT3,ARHGAP35	AP2S1	SLC1A5,MIR3190,BBC3,ARHGAP35,AP2S1,ZC3H4,CCDC9,FKRP,STRN4,NPAS1	MCF7,K562	ChIA-PET	22265404	AP2S1	10918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.986927619069873
chr19	47394206	47394341	47394251	Y	NA	AP2S1	ARHGAP35,SAE1,NPAS1,TMEM160,ZC3H4,FKRP,STRN4,PRKD2,SLC1A5,SNAR-E,AP2S1	IMR90	Hi-C	24141950	AP2S1	41957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr19	47448240	47448462	47448420	Y	PNMAL1,PNMAL2,DACT3,ARHGAP35,MEIS3,NPAS1	NA	NA	NA	NA	NA	NPAS1	72615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47458912	47459233	47458939	Y	ZC3H4,CCDC9	NA	NPAS1	IMR90	Hi-C	24141950	NPAS1	61844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47487878	47488175	47487946	Y	ZC3H4,DHX34,CCDC9,C5AR1	NPAS1	NPAS1	IMR90	Hi-C	24141950	NPAS1	32902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.365351066215793
chr19	47599577	47599849	47599731	Y	NA	TMEM160,SAE1,ZC3H4	NA	NA	NA	NA	SAE1	14682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.43815842562598
chr19	47610820	47611121	47611012	Y	NA	SAE1,ZC3H4	TMEM160,NPAS1	IMR90	Hi-C	24141950	SAE1	3410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	47611153	47611400	47611382	Y	NA	SAE1,ZC3H4	TMEM160,NPAS1	IMR90	Hi-C	24141950	SAE1	3131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	47613231	47613789	47613256	Y	PRKD2,STRN4,NAPA,GPR77,DHX34,CCDC9,C5AR1,BBC3,ZC3H4	SAE1,ZC3H4	TMEM160,NPAS1	IMR90	Hi-C	24141950	SAE1	742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.256385584383049
chr19	47613894	47614902	47614503	Y	PTGIR,PRKD2,NAPA,GPR77,GLTSCR1,DHX34,CCDC9,C5AR1,BBC3,ZC3H4	ZC3H4	NA	NA	NA	NA	SAE1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	47662714	47662828	47662771	Y	NA	SAE1,ZC3H4	NA	NA	NA	NA	ZC3H4	47705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47689758	47690163	47690151	Y	GLTSCR1,BBC3	MIR3191,BBC3	NA	NA	NA	NA	MIR3191	38036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47729030	47729228	47729064	Y	NA	MIR3191,BBC3,CCDC9,PRR24	NA	NA	NA	NA	MIR3191	831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	47746329	47746738	47746506	Y	SLC1A5,SLC1A5,SLC1A5,MEIS3,EHD2,BBC3,PRR24	MIR3191,BBC3,CCDC9,PRR24,C5AR1	NA	NA	NA	NA	CCDC9	10499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47776748	47776969	47776841	Y	GLTSCR2,ZC3H4,NAPA,GLTSCR1,DHX34,BBC3,CCDC9,GPR77,C5AR1	MIR3191,BBC3,CCDC9,PRR24,C5AR1	NA	NA	NA	NA	PRR24	606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.546632281286451
chr19	47817254	47817597	47817448	Y	ZC3H4,NAPA,DHX34,BBC3,CCDC9,C5AR1,GPR77	PRR24,C5AR1,DHX34	NA	NA	NA	NA	C5AR1	25974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	47818553	47819137	47818792	Y	ZC3H4,NAPA,DHX34,CCDC9,C5AR1,GPR77	PRR24,C5AR1,DHX34	NA	NA	NA	NA	C5AR1	27273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr19	47826848	47827155	47827019	Y	ZC3H4,ZNF541,NAPA,DHX34,CCDC9,C5AR1,GPR77	C5AR1,DHX34	NA	NA	NA	NA	DHX34	23383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	47854917	47855115	47854986	Y	ZC3H4,BBC3,CCDC9,C5AR1,GPR77,NAPA,DHX34	DHX34	NA	NA	NA	NA	DHX34	4379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	47950200	47950556	47950503	Y	SLC8A2	MEIS3,KPTN	NA	NA	NA	NA	MEIS3	29420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	48016024	48016351	48016088	Y	SULT2A1,CCDC9,GPR77,DHX34,NAPA	KPTN,NAPA	NA	NA	NA	NA	NAPA	146	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19269914343133
chr19	48101913	48102072	48101991	Y	NA	NA	SLC8A2,MEIS3,NAPA,LOC100505681,KPTN,GLTSCR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NAPA	85416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	48103581	48103982	48103689	Y	GLTSCR2,BBC3,PRR24,NAPA,GLTSCR1	NA	GLTSCR1,NAPA	MCF7	ChIA-PET	22265404	NAPA	87084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.240774963756723
chr19	48151789	48152128	48151872	Y	NA	NA	NA	NA	NA	NA	EHD2	62472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	48222362	48222481	48222377	Y	SEPW1,PLA2G4C,MEIS3,SLC8A2	EHD2,GLTSCR2	NA	NA	NA	NA	EHD2	7762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr19	48277326	48277623	48277440	Y	SLC8A2,PLA2G4C	GLTSCR2,SEPW1,RPL23AP80	NA	NA	NA	NA	SEPW1	2206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	48395340	48395779	48395530	Y	NA	SULT2A1	NA	NA	NA	NA	SULT2A1	7686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21102808941369
chr19	48896382	48896733	48896528	Y	GRIN2D	TMEM143,SYNGR4,KDELR1	NA	NA	NA	NA	KDELR1	3572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	48974873	48974967	48974920	Y	NA	GRWD1,CYTH2,LMTK3	NA	NA	NA	NA	CYTH2	4584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	49092091	49092636	49092297	Y	BCAT2,TMEM143,KDELR1,KCNJ14,MAMSTR,SPHK2,SPHK2,DBP,CA11	SULT2B1,SPHK2,RPL18,DBP	NA	NA	NA	NA	SPHK2	27912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	49315464	49315783	49315738	Y	NA	HSD17B14	NA	NA	NA	NA	HSD17B14	22152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	49465555	49466264	49465736	Y	IZUMO1,PPP1R15A,CD37,FTL	DHDH,BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	294	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.45589730343266
chr19	49466802	49467527	49467169	Y	IZUMO1,PPP1R15A,CD37,FTL	DHDH,BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	FTL	244	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.88337065666424
chr19	49486890	49487028	49486959	Y	NA	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	GYS1	7539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	49493898	49494273	49494153	Y	NA	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	GYS1	294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	49495555	49495708	49495609	Y	SPHK2,SPHK2,BCAT2,NUCB1,TRPM4	BAX,FTL,GYS1,RUVBL2	NA	NA	NA	NA	RUVBL2	850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr19	49710890	49711280	49711224	Y	IZUMO1,PPP1R15A,RPS11,FCGRT,CD37	NA	NA	NA	NA	NA	TRPM4	51892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	50092384	50092705	50092545	Y	BCL2L12	PRRG2,NOSIP,PRR12,RRAS	NA	NA	NA	NA	PRR12	195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	50276330	50276635	50276461	Y	VRK3,BCL2L12,AP2A1,MED25	AP2A1,MED25	NA	NA	NA	NA	AP2A1	8105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr19	50414628	50414884	50414779	Y	RPS11,FCGRT,NR1H2,IL4I1,NUP62,NUP62,NUP62,NUP62,IL4I1,ATF5	PNKP,TBC1D17,AKT1S1,ATF5,IL4I1,NUP62,MIR4751	NA	NA	NA	NA	ATF5	15075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	50833837	50834367	50834143	Y	MYH14,GPR32,SYT3,SYT3,SHANK1,LRRC4B,ASPDH,KCNC3	NR1H2,KCNC3	NA	NA	NA	NA	KCNC3	405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	50839026	50839389	50839371	Y	ACPT,SYT3,LOC342918,KCNC3	NR1H2,KCNC3,POLD1	NA	NA	NA	NA	KCNC3	4254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	50888786	50889179	50888984	Y	ACPT,LOC342918	POLD1	NA	NA	NA	NA	POLD1	3325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	51111018	51111676	51111369	Y	NA	NA	NA	NA	NA	NA	JOSD2	98408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	51287900	51288107	51288100	Y	NA	C19orf48	NA	NA	NA	NA	C19orf48	18079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	51339255	51339614	51339393	Y	KLK14,IGLON5,LRRC4B,SYT3,SYT3	C19orf48	NA	NA	NA	NA	C19orf48	33069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	51898753	51899047	51898851	Y	SIGLEC9,CD33,FPR2,SIGLEC14,SIGLEC10,FPR3,FPR2,FPR1	ETFB,NKG7,LIM2	NA	NA	NA	NA	LIM2	9539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	52075080	52075242	52075159	Y	ZNF615,ZNF614,ZNF613,SIGLEC7,SIGLEC6,ZNF649,ZNF175	ZNF175	NA	NA	NA	NA	ZNF175	2529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	52192085	52192767	52192400	Y	ZNF841,ZNF615,IGLON5,SIGLEC8,ZNF175,ZNF649,ZNF577,ZNF577	MIRLET7E	NA	NA	NA	NA	MIRLET7E	1272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr19	52192842	52193550	52192951	Y	ZNF615,IGLON5,ZNF577,ZNF577	MIRLET7E	NA	NA	NA	NA	MIRLET7E	489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	52586676	52587051	52586863	Y	NA	ZNF432,ZNF841	NA	NA	NA	NA	ZNF432	9940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	52641935	52642117	52642107	Y	ZNF649,ZNF610,ZNF528,ZNF836,ZNF616	ZNF432,ZNF841,ZNF616,RPL37P23,ZNF836,PPP2R1A	NA	NA	NA	NA	ZNF616	760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr19	52697339	52697517	52697506	Y	ZNF350,ZNF432,ZNF836,ZNF83,ZNF808,ZNF766	ZNF836,PPP2R1A	NA	NA	NA	NA	PPP2R1A	6047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	53128477	53128840	53128754	Y	NA	NA	NA	NA	NA	NA	ZNF83	62909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	53129559	53129725	53129643	Y	ZNF160,ZNF616,ZNF766,ZNF808,ZNF701,ZNF611,ZNF611,ZNF83	NA	NA	NA	NA	NA	ZNF83	62024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	53145294	53145545	53145446	Y	NA	ZNF83	NA	NA	NA	NA	ZNF83	46204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	53150651	53150972	53150733	Y	NA	ZNF83	ZNF137P	IMR90	Hi-C	24141950	ZNF83	40777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	53426305	53426488	53426354	Y	ZNF765,ZNF468,ZNF816	ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	17366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	53444729	53445104	53444918	Y	ZNF765,ZNF761,ZNF665,ZNF347,ZNF347,ZNF160,ZNF808,ZNF701,ZNF701,ZNF83,ZNF816	ZNF816-ZNF321P,ZNF321P,ZNF816	NA	NA	NA	NA	ZNF816-ZNF321P	875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr19	53592651	53593387	53593361	Y	NA	ERVV-2,ZNF160	NA	NA	NA	NA	ZNF160	11302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr19	53727403	53727861	53727738	Y	NA	ZNF665	NA	NA	NA	NA	ZNF665	32764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.646226959889645
chr19	54116077	54116235	54116154	Y	NA	NA	DPRX	IMR90	Hi-C	24141950	ZNF813	147088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	54145720	54146081	54145890	Y	NA	NA	NA	NA	NA	NA	AC008753.3	130772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	54288550	54288757	54288603	Y	ZNF765,ZNF813,ZNF331,DPRX	AC008753.3	NA	NA	NA	NA	AC008753.3	11697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	54373735	54373974	54373935	Y	VSTM1,TFPT,OSCAR,MBOAT7,LILRB3,LILRB2,LILRA6,LILRA5,LILRA3,LILRA3,CNOT3,ZNF765,ZNF761,ZNF813,NLRP12,NLRP12,MYADM,MYADM,MYADM	AC008440.10,MYADM,AC008753.6,PRKCG	NA	NA	NA	NA	AC008753.6	3374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	54548907	54549052	54548979	Y	NLRP12,NLRP12,VSTM1	NA	NA	NA	NA	NA	OSCAR	54948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	54707641	54707712	54707644	Y	NA	LENG1,TMC4,MBOAT7,TSEN34,RPS9,AC012314.19	NA	NA	NA	NA	AC012314.19	3574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	54713468	54714085	54713942	Y	NLRP12,NLRP12,MYADM,MYADM,MYADM,VSTM1,TARM1,OSCAR,LILRB4,LILRB1,LILRB1,LILRB1,LILRA5,LILRA3,LILRA3,LILRA2,LILRA1,LENG8,LAIR1,MBOAT7,TSEN34,LILRB3,LILRB2,LILRA6	TMC4,MBOAT7,TSEN34,RPS9,AC012314.19	NA	NA	NA	NA	AC012314.19	2182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	54714720	54715094	54714879	Y	NLRP12,NLRP12,MYADM,MYADM,MYADM,VSTM1,OSCAR,LILRB4,LILRB1,LILRB1,LILRB1,LILRA5,LILRA3,LILRA3,LILRA2,LILRA1,LENG8,LAIR1,MBOAT7,TSEN34,LILRB3,LILRB2,LILRA6	TMC4,MBOAT7,TSEN34,RPS9,AC012314.19	NA	NA	NA	NA	AC012314.19	3434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	55034604	55034910	55034757	Y	NA	LAIR2	NA	NA	NA	NA	LAIR2	27504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	55582606	55582776	55582718	Y	NA	RDH13,PPP1R12C	NA	NA	NA	NA	RDH13	1947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	55619280	55619321	55619308	Y	NA	RDH13,PPP1R12C,TNNT1,TNNI3	NA	NA	NA	NA	PPP1R12C	7606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr19	55627475	55627790	55627718	Y	LILRB1,LILRB1,LILRB4,FCAR,NCR1,GP6,ZNF865,TMEM86B,TMEM150B,SHISA7,PPP6R1,PPP1R12C	RDH13,PPP1R12C,TNNT1,TNNI3	NA	NA	NA	NA	PPP1R12C	548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	55721470	55721547	55721521	Y	NA	PTPRH,TMEM86B,PPP6R1	NA	NA	NA	NA	PTPRH	2596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr19	55880979	55881171	55881094	Y	ZNF579,NAT14,COX6B2,IL11	SUV420H2,IL11,TMEM190,RPL28,UBE2S	NA	NA	NA	NA	IL11	1148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	55885541	55885905	55885786	Y	NA	SUV420H2,IL11,TMEM190,RPL28,UBE2S	NA	NA	NA	NA	TMEM190	299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr19	55917170	55917359	55917333	Y	U2AF2,SUV420H2,COX6B2,UBE2S	IL11,TMEM190,RPL28,UBE2S	NA	NA	NA	NA	UBE2S	25	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	55983917	55984059	55984005	Y	RDH13,HSPBP1,ISOC2	ISOC2,ZNF628,NAT14	ZNF628,ISOC2	K562,MCF7	ChIA-PET	22265404	ZNF628	1640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr19	56061327	56061704	56061673	Y	NA	SBK2,ZNF579,ZNF524,FIZ1	SGK110	K562	ChIA-PET	22265404	SBK2	14871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr19	56064106	56064277	56064192	Y	ZNF579	SBK2,ZNF579,ZNF524,FIZ1	NA	NA	NA	NA	SBK2	17650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	56097081	56097467	56097273	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581	SSC5D,SGK110,SBK2,ZNF579	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF579	6870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr19	56098668	56099098	56098905	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581	SSC5D,SGK110,SBK2,ZNF579	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF579	8457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	56116208	56117068	56116734	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	4872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.604320646242585
chr19	56117286	56117783	56117722	Y	NA	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	5950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	56118803	56119132	56118967	Y	COX6B2	ZNF579,ZNF524,FIZ1,ZNF784,ZNF580,ZNF581,CCDC106,U2AF2	NA	NA	NA	NA	FIZ1	7467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	56169893	56170373	56169939	Y	NA	ZNF784,ZNF580,ZNF581,CCDC106,U2AF2,EPN1	NA	NA	NA	NA	U2AF2	6381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	56621885	56622165	56622061	Y	NA	ZNF787,ZNF444	NA	NA	NA	NA	ZNF787	8484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr19	56623811	56623981	56623918	Y	ZNF865,EPN1	ZNF787,ZNF444	NA	NA	NA	NA	ZNF787	6668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	56796830	56796936	56796883	Y	NA	NA	NA	NA	NA	NA	ZNF542	80532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	56807694	56808027	56807709	Y	NLRP13,ZSCAN5A	NA	NA	NA	NA	NA	ZNF542	69441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	56810811	56811236	56810900	Y	NA	NA	NA	NA	NA	NA	ZNF542	66232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	57349423	57349757	57349684	Y	ZNF543,ZNF583,ZNF583,ZNF583,ZNF667,ZNF471,ZNF470,ZNF71,LOC147670,ZNF835,ZIM2,PEG3	PEG3,ZIM2	NA	NA	NA	NA	PEG3	339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr19	57351144	57351414	57351350	Y	ZNF543,AURKC,AURKC,ZNF583,ZNF583,ZNF583,ZNF667,ZNF471,ZFP28,ZNF470,LOC147670,ZNF835,PEG3,ZIM2,PEG3	PEG3,ZIM2	NA	NA	NA	NA	ZIM2	1047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr19	57944833	57945004	57944919	Y	NA	ZNF548,ZNF17,ZNF749,VN1R1,ZNF772	NA	NA	NA	NA	ZNF749	136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr19	57965552	57965851	57965609	Y	NA	ZNF17,ZNF749,VN1R1,ZNF772,ZNF419,ZNF773	NA	NA	NA	NA	VN1R1	3	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr19	57980425	57980680	57980553	Y	NA	ZNF749,VN1R1,ZNF772,ZNF419,ZNF773	NA	NA	NA	NA	ZNF772	6258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	58162762	58163096	58162801	Y	NA	ZNF134,ZNF211,ZNF551	NA	NA	NA	NA	ZNF211	23001	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.01354618554103
chr19	58175767	58176046	58175802	Y	ZNF460,ZNF543,ZNF304,ZNF548,ZNF17,ZNF772,ZNF549,ZSCAN18,ZSCAN18,ZSCAN1,ZNF776,ZNF671,ZNF586,ZNF418,ZNF417,ZNF256,ZNF135,ZNF550,ZNF211,ZNF551	ZNF211,ZNF551	NA	NA	NA	NA	ZNF551	15291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	58217187	58217439	58217313	Y	NA	ZNF551,ZNF776	NA	NA	NA	NA	ZNF551	25850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	58218479	58218613	58218485	Y	ZNF543,ZNF304,ZNF548,ZNF17,VN1R1,ZNF772,ZNF419,ZNF773,ZNF549,ZNF416,ZIK1,ZNF134,ZSCAN4,ZNF551,ZSCAN18,ZSCAN1,ZNF814,ZNF606,ZNF418,ZNF256,ZNF135,LOC100293516,ZNF671,ZNF586,ZNF154	ZNF551,ZNF776	NA	NA	NA	NA	ZNF551	27142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	58237757	58238155	58237774	Y	NA	ZNF551,ZNF776	ZNF154	IMR90	Hi-C	24141950	ZNF776	18009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr19	58315114	58315751	58315446	Y	ZNF543,ZNF549,ZNF418,ZNF135,ZNF154,ZNF552	ZNF552,ZNF587	NA	NA	NA	NA	ZNF552	8530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	58321012	58321020	58321017	Y	VN1R1,ZNF211,ZNF587,ZNF417,ZNF776,ZNF586,ZNF552	ZNF552,ZNF587	NA	NA	NA	NA	ZNF552	3261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	58413801	58413982	58413868	Y	ZNF154,ZNF418	ZNF417,ZNF256	NA	NA	NA	NA	ZNF417	11996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr19	58415823	58415990	58415970	Y	NA	ZNF417,ZNF256	NA	NA	NA	NA	ZNF417	9988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	58532436	58532530	58532517	Y	NA	C19orf18,CTD-2368P22.1,ZNF606	NA	NA	NA	NA	ZNF606	19719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr19	58557282	58557656	58557471	Y	NA	CTD-2368P22.1,ZNF606	NA	NA	NA	NA	ZNF606	44565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr19	58742086	58742094	58742090	Y	NA	ZNF274,ZNF544,ZNF8	NA	NA	NA	NA	ZNF544	4126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr19	58784706	58785064	58784920	Y	NA	ZNF544,ZNF8,ERVK3-1	NA	NA	NA	NA	ZNF8	3254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr19	58824678	58824957	58824818	Y	ZNF256	ZNF8,ERVK3-1,ZSCAN22,A1BG,ZNF497	NA	NA	NA	NA	ERVK3-1	9963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr19	58911739	58912056	58911822	Y	NA	A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF324B	NA	NA	NA	NA	ZNF584	868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr19	58912594	58912944	58912773	Y	ZNF417,ZNF418,ZNF256,ZSCAN1,ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,MZF1,ZNF497,ZNF837,ZNF324B,ZNF324	A1BG,ZNF497,ZNF837,RPS5,ZNF584,ZNF324B	NA	NA	NA	NA	ZNF584	1723	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.45089011154431
chr19	59029635	59029989	59029796	Y	NA	SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M	SLC27A5	MCF7	ChIA-PET	22265404	SLC27A5	7855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr19	59049687	59049971	59049795	Y	ZNF135,ZSCAN18,ZNF544,ZNF8,ZNF497,ZNF324B,ZNF324,UBE2M,TRIM28	SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1,MGC2752	NA	NA	NA	NA	ZBTB45	1409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr19	59050036	59050316	59050176	Y	ZNF135,ZSCAN18,ZNF329,ZNF544,ZNF8,ZNF132,ZNF324B,ZNF324,TRIM28,MZF1	SLC27A5,ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1,MGC2752	NA	NA	NA	NA	ZBTB45	1758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr19	59087419	59087864	59087514	Y	NA	ZBTB45,TRIM28,CHMP2A,UBE2M,CENPBD1P1,MZF1,MGC2752	NA	NA	NA	NA	MGC2752	3527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	1679499	1679591	1679561	Y	NA	NA	NA	NA	NA	NA	TMEM18	1004060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	1722150	1722351	1722236	Y	NA	NA	NA	NA	NA	NA	TMEM18	1046711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	2617084	2617480	2617333	Y	NA	NA	NA	NA	NA	NA	TSSC1	762173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	3340825	3341028	3341010	Y	NA	TSSC1,TRAPPC12	NA	NA	NA	NA	TSSC1	38625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr2	3528781	3528909	3528848	Y	NA	ADI1	NA	NA	NA	NA	ADI1	7274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	3583560	3583858	3583796	Y	NA	AC108488.4,RNASEH1-AS1,RNASEH1,RPS7	NA	NA	NA	NA	AC108488.4	1097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.107651212667887
chr2	3699787	3700199	3700016	Y	NA	NA	NA	NA	NA	NA	RPS7	78992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	3707060	3707165	3707123	Y	NA	NA	NA	NA	NA	NA	RPS7	86265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	7068069	7068244	7068157	Y	NA	RNF144A	NA	NA	NA	NA	RNF144A	12546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	7081985	7082191	7081999	Y	NA	RNF144A	NA	NA	NA	NA	RNF144A	26462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr2	7082324	7082720	7082522	Y	RNF144A	RNF144A	NA	NA	NA	NA	RNF144A	26801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	7191649	7191931	7191786	Y	RNF144A	NA	NA	NA	NA	NA	RNF144A	136126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	8231020	8231604	8231329	Y	NA	NA	NA	NA	NA	NA	ID2	585371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.31358232316691
chr2	8259183	8259343	8259265	Y	NA	NA	NA	NA	NA	NA	ID2	557632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	8259720	8260124	8259943	Y	NA	NA	NA	NA	NA	NA	ID2	556851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.962769349813779
chr2	8260417	8260563	8260490	Y	NA	NA	NA	NA	NA	NA	ID2	556412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr2	8712183	8712281	8712245	Y	NA	NA	LINC00299,LOC100506274,ID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ID2	104694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr2	8712879	8713177	8712998	Y	NA	NA	LOC100506274,ID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ID2	103798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	8713737	8713978	8713829	Y	NA	NA	LOC100506274,ID2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ID2	102997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr2	8767111	8767480	8767322	Y	NA	ID2	LINC00299,LOC339788,LOC100506274	IMR90	Hi-C	24141950	ID2	49495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.624205091183795
chr2	8773908	8774094	8774001	Y	NA	ID2,AC011747.7	LINC00299,LOC339788,LOC100506274,ID2	IMR90	Hi-C	24141950	ID2	42881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.342506554517358
chr2	9374844	9375591	9375054	Y	YWHAQ,ASAP2	ASAP2	NA	NA	NA	NA	ASAP2	29950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.26756228294973
chr2	9391833	9392063	9392058	Y	NA	ASAP2	NA	NA	NA	NA	ASAP2	46939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	9641378	9641587	9641543	Y	NA	IAH1	NA	NA	NA	NA	IAH1	29591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	9678248	9678641	9678477	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	15280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	9688603	9688902	9688848	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	5019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr2	9692579	9693026	9692911	Y	ADAM17	ADAM17	NA	NA	NA	NA	ADAM17	895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	9705660	9705808	9705714	Y	NA	ADAM17	NA	NA	NA	NA	ADAM17	11739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	9811704	9812003	9811849	Y	NA	YWHAQ	NA	NA	NA	NA	YWHAQ	42561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	10075100	10075410	10075131	Y	TAF1B	GRHL1	GRHL1	IMR90	Hi-C	24141950	GRHL1	7931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr2	10260365	10260994	10260486	Y	ODC1,TAF1B,RRM2,RRM2	CYS1	NA	NA	NA	NA	RRM2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.26869646645476
chr2	10261505	10261712	10261609	Y	NA	CYS1,RRM2	NA	NA	NA	NA	RRM2	1050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr2	10274411	10274722	10274506	Y	TAF1B,RRM2,RRM2,C2orf48	RRM2	NA	NA	NA	NA	RRM2	13956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr2	10330449	10330626	10330557	Y	NA	NA	NA	NA	NA	NA	RRM2	69994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr2	10418251	10419155	10418675	Y	NA	HPCAL1	RRM2,GRHL1,NOL10,HPCAL1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	21860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.522965126595432
chr2	10423423	10423670	10423576	Y	NA	HPCAL1	RRM2,GRHL1,NOL10,HPCAL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	17345	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	10425680	10425925	10425803	Y	HPCAL1	HPCAL1	HPCAL1,RRM2,C2orf48,MIR4261	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HPCAL1	15090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr2	10441145	10441558	10441458	Y	KLF11	HPCAL1	ODC1	IMR90	Hi-C	24141950	HPCAL1	130	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.92141529486596
chr2	10471190	10471549	10471320	Y	HPCAL1,HPCAL1	HPCAL1	ODC1	IMR90	Hi-C	24141950	HPCAL1	30175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	10540655	10540950	10540779	Y	KLF11,KLF11,HPCAL1	ODC1,RP11-320M2.1	NA	NA	NA	NA	ODC1	45680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	10549320	10549595	10549372	Y	HPCAL1,HPCAL1	ODC1,RP11-320M2.1	NA	NA	NA	NA	ODC1	37035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	10550434	10550795	10550555	Y	HPCAL1,HPCAL1	ODC1,RP11-320M2.1	ODC1	IMR90	Hi-C	24141950	ODC1	35835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr2	10950898	10951279	10951023	Y	NA	PDIA6	ATP6V1C2	IMR90	Hi-C	24141950	PDIA6	24824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	11076268	11076628	11076485	Y	NA	KCNF1	KCNF1,FLJ33534,PDIA6	IMR90	Hi-C	24141950	KCNF1	26205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	11270081	11270242	11270156	Y	KCNF1,C2orf50	PQLC3	NA	NA	NA	NA	PQLC3	23082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr2	11343595	11343995	11343855	Y	E2F6	NA	NA	NA	NA	NA	PQLC3	50271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	11352501	11352895	11352887	Y	NA	NA	NA	NA	NA	NA	PQLC3	59177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.386881308749371
chr2	11443913	11444199	11444137	Y	NA	ROCK2	NA	NA	NA	NA	ROCK2	42257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr2	11483029	11483376	11483266	Y	NA	ROCK2,AC099344.2	NA	NA	NA	NA	ROCK2	3080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr2	11514785	11514933	11514926	Y	NA	ROCK2,AC099344.2	ROCK2,E2F6,PQLC3,PDIA6,C2orf50	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC099344.2	11023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr2	11547236	11547448	11547321	Y	NA	AC099344.2	ROCK2,PQLC3,C2orf50	IMR90	Hi-C	24141950	AC099344.2	43474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	11621258	11621798	11621627	Y	NA	E2F6	GREB1,NTSR2,FLJ33534,C2orf50,MIR4429,ROCK2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	E2F6	16961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	11623044	11623914	11623865	Y	NA	E2F6,GREB1	GREB1,NTSR2,FLJ33534,C2orf50,MIR4429,ROCK2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	E2F6	18747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.515571137778561
chr2	11623935	11624324	11624249	Y	NA	E2F6,GREB1	GREB1,NTSR2,FLJ33534,C2orf50,MIR4429,ROCK2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	E2F6	19638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr2	11624930	11625118	11625003	Y	ROCK2,GREB1,GREB1,GREB1	E2F6,GREB1	NTSR2,GREB1,MIR4429,FLJ33534,C2orf50	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	E2F6	20633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.563557171077635
chr2	11634636	11634845	11634741	Y	NA	E2F6,GREB1	GREB1,MIR4429	IMR90	Hi-C	24141950	E2F6	30339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	11639355	11639445	11639424	Y	NA	E2F6,GREB1	GREB1,MIR4429	IMR90	Hi-C	24141950	GREB1	32797	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.9100876651388
chr2	11673553	11673665	11673599	Y	NA	GREB1	NA	NA	NA	NA	GREB1	1311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	11675998	11676466	11676097	Y	NA	GREB1	NA	NA	NA	NA	GREB1	3756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	11681139	11681830	11681410	Y	NA	GREB1	NA	NA	NA	NA	GREB1	8897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	11720189	11720409	11720300	Y	NA	GREB1	NA	NA	NA	NA	GREB1	47947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	11838238	11838829	11838549	Y	E2F6,LPIN1	LPIN1,AC106875.1	GREB1,LPIN1	IMR90	Hi-C	24141950	AC106875.1	18652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	11882551	11882713	11882627	Y	E2F6,LPIN1	NA	NA	NA	NA	NA	AC106875.1	62965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	11884050	11884543	11884432	Y	NA	NA	NA	NA	NA	NA	AC106875.1	64464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.334289922707903
chr2	11970136	11970284	11970210	Y	NA	NA	NA	NA	NA	NA	AC106875.1	150550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	11970305	11970612	11970555	Y	NA	NA	NA	NA	NA	NA	AC106875.1	150719	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.00418403728857
chr2	12466136	12466597	12466183	Y	TRIB2	NA	LOC100506474,MIR4262,TRIB2,LPIN1	IMR90	Hi-C	24141950	TRIB2	388418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	13768746	13768755	13768750	Y	NA	NA	NA	NA	NA	NA	TRIB2	913731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	14440337	14440350	14440344	Y	NA	NA	NA	NA	NA	NA	FAM84A	330460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	15199994	15200355	15200088	Y	NA	NA	NA	NA	NA	NA	FAM84A	429184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	15282327	15282677	15282506	Y	NA	NA	NA	NA	NA	NA	NBAS	416777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	15397207	15397542	15397373	Y	DDX1,NBAS	NA	NA	NA	NA	NA	NBAS	301912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	15700375	15700622	15700454	Y	DDX1,NBAS	NBAS,DDX1	NA	NA	NA	NA	NBAS	921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	16210180	16210466	16210268	Y	NA	NA	NA	NA	NA	NA	MYCN	131494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	16210624	16210684	16210654	Y	NA	NA	NA	NA	NA	NA	MYCN	131938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	16576517	16576693	16576605	Y	NA	NA	NA	NA	NA	NA	FAM49A	268906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	17719194	17719451	17719323	Y	MSGN1	VSNL1	NA	NA	NA	NA	VSNL1	801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	19273463	19273583	19273517	Y	NA	NA	OSR1	IMR90	Hi-C	24141950	OSR1	282831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	19340591	19340734	19340664	Y	OSR1	NA	OSR1,MIR4757	IMR90	Hi-C	24141950	OSR1	215680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	19547126	19547267	19547173	Y	NA	OSR1	NA	NA	NA	NA	OSR1	9147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	19548078	19548301	19548191	Y	NA	OSR1	NA	NA	NA	NA	OSR1	8113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	19562818	19563058	19562929	Y	NA	OSR1	NA	NA	NA	NA	OSR1	6404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	19788015	19788399	19788228	Y	NA	NA	NA	NA	NA	NA	OSR1	231601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	20176136	20176469	20176303	Y	WDR35	WDR35,MATN3	NA	NA	NA	NA	WDR35	11423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr2	20249984	20250622	20250147	Y	TTC32,PUM2	MATN3,LAPTM4A,RP11-644K8.1	NA	NA	NA	NA	RP11-644K8.1	89	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20252703	20252899	20252848	Y	NA	MATN3,LAPTM4A,RP11-644K8.1	NA	NA	NA	NA	RP11-644K8.1	2808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	20262884	20263152	20263015	Y	TTC32	LAPTM4A,RP11-644K8.1	WDR35,MATN3,LAPTM4A	IMR90	Hi-C	24141950	RP11-644K8.1	12989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	20341243	20341467	20341355	Y	NA	NA	PUM2,WDR35,MATN3,SDC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SDC1	81727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	20372050	20372172	20372122	Y	SDC1,SDC1	NA	MATN3,SDC1,PUM2	IMR90	Hi-C	24141950	SDC1	51022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	20379968	20380084	20380011	Y	SDC1,SDC1	SDC1	NA	NA	NA	NA	SDC1	43110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194263297367269
chr2	20386283	20386578	20386422	Y	TTC32,HS1BP3	SDC1	NA	NA	NA	NA	SDC1	36616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.660031685178841
chr2	20407883	20408194	20408074	Y	RHOB,SDC1,SDC1	SDC1	NA	NA	NA	NA	SDC1	15000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.225324440875159
chr2	20415166	20415327	20415249	Y	NA	SDC1	NA	NA	NA	NA	SDC1	7867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.331661384378189
chr2	20421306	20421667	20421468	Y	NA	SDC1	NA	NA	NA	NA	SDC1	1527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	20431248	20431615	20431535	Y	SDC1,SDC1	SDC1	NA	NA	NA	NA	SDC1	8054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	20491517	20491908	20491876	Y	NA	NA	SDC1	IMR90	Hi-C	24141950	PUM2	58087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	20544740	20544866	20544805	Y	NA	PUM2	PUM2,HS1BP3	IMR90	Hi-C	24141950	PUM2	5129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr2	20618253	20618491	20618372	Y	NA	RHOB	HS1BP3,RHOB	IMR90	Hi-C	24141950	RHOB	26344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20624612	20624982	20624777	Y	HS1BP3	RHOB	HS1BP3,RHOB,PUM2	IMR90	Hi-C	24141950	RHOB	19853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20630632	20630977	20630855	Y	HS1BP3	RHOB	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RHOB	13858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	20638245	20638508	20638456	Y	HS1BP3	RHOB	HS1BP3,GDF7	IMR90	Hi-C	24141950	RHOB	6327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	20674316	20674523	20674398	Y	NA	RHOB	RHOB,HS1BP3	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RHOB	29481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20690151	20690332	20690196	Y	NA	RHOB	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RHOB	45316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr2	20690620	20690861	20690695	Y	NA	RHOB	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RHOB	45785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20709880	20710074	20709978	Y	NA	NA	HS1BP3,RHOB	IMR90	Hi-C	24141950	RHOB	65045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	20738527	20738717	20738644	Y	NA	NA	HS1BP3,RHOB	IMR90	Hi-C	24141950	RHOB	93692	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05661481397807
chr2	20778645	20778883	20778839	Y	NA	NA	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	69966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr2	20779015	20779511	20779185	Y	NA	NA	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	69338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.993498964894159
chr2	20784084	20784557	20784460	Y	NA	NA	HS1BP3,RHOB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	64292	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05644389490253
chr2	20793103	20793496	20793437	Y	APOB	NA	HS1BP3,RHOB,PUM2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HS1BP3	55353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.990378800392172
chr2	20795868	20796230	20795893	Y	RHOB,HS1BP3	NA	HS1BP3,RHOB,PUM2	IMR90	Hi-C	24141950	HS1BP3	52619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr2	20796774	20797139	20797030	Y	APOB,RHOB,GDF7	NA	NA	NA	NA	NA	HS1BP3	51710	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.81229888187273
chr2	20798919	20799303	20799111	Y	NA	HS1BP3	NA	NA	NA	NA	HS1BP3	49546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	20811186	20811439	20811262	Y	NA	HS1BP3	NA	NA	NA	NA	HS1BP3	37410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.583773144446355
chr2	20817015	20817334	20817182	Y	RHOB,GDF7	HS1BP3	NA	NA	NA	NA	HS1BP3	31515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	20848318	20848468	20848370	Y	NA	HS1BP3	NA	NA	NA	NA	HS1BP3	381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	20965440	20965780	20965672	Y	NA	NA	NA	NA	NA	NA	C2orf43	55102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	23095033	23095160	23095097	Y	NA	NA	NA	NA	NA	NA	ATAD2B	1052824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	23743180	23743526	23743353	Y	NA	NA	NA	NA	NA	NA	ATAD2B	404458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	23901919	23902357	23902230	Y	UBXN2A	NA	NA	NA	NA	NA	ATAD2B	245627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	24238466	24238799	24238602	Y	NA	MFSD2B,C2orf44,FKBP1B	NA	NA	NA	NA	MFSD2B	7515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.289092525483307
chr2	24491623	24491942	24491630	Y	ATAD2B,NCOA1,ITSN2	NA	NA	NA	NA	NA	RPL36AP13	63439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	24535588	24535972	24535848	Y	NA	RPL36AP13,ITSN2	NA	NA	NA	NA	RPL36AP13	19409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	24713346	24713697	24713476	Y	DNAJC27,ITSN2	NCOA1	CENPO,NCOA1	IMR90	Hi-C	24141950	NCOA1	563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	24859370	24859696	24859496	Y	NA	NA	NA	NA	NA	NA	NCOA1	146587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	25193628	25193634	25193631	Y	NA	DNAJC27-AS1,DNAJC27	NA	NA	NA	NA	DNAJC27	665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	25514055	25514238	25514170	Y	NA	DNMT3A	NA	NA	NA	NA	DNMT3A	49221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	25701614	25701880	25701747	Y	NA	NA	NA	NA	NA	NA	DNMT3A	138155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	25780615	25780755	25780681	Y	RAB10	NA	NA	NA	NA	NA	DTNB	113748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	25874787	25874953	25874848	Y	RAB10	DTNB	NA	NA	NA	NA	DTNB	19550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	26220678	26220902	26220866	Y	RAB10	KIF3C,UQCRHP2,RAB10	ASXL2,RAB10,FAM59B,KIF3C	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UQCRHP2	5015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	26241064	26241266	26241191	Y	RAB10	KIF3C,UQCRHP2,RAB10	ASXL2,RAB10,FAM59B,HADHB,KIF3C,HADHA	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RAB10	13710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	26259161	26259559	26259360	Y	RAB10	UQCRHP2,RAB10	NA	NA	NA	NA	RAB10	4185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	26521727	26522029	26521734	Y	NA	EPT1,GPR113	NA	NA	NA	NA	EPT1	7386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	26522632	26522929	26522714	Y	NA	EPT1,GPR113	NA	NA	NA	NA	EPT1	6486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr2	26567616	26567683	26567653	Y	NA	EPT1,GPR113	NA	NA	NA	NA	GPR113	2	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	26943701	26943984	26943834	Y	GPR113	AC015977.5,KCNK3,CENPA	NA	NA	NA	NA	KCNK3	30082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	26946934	26947339	26946998	Y	C2orf28,C2orf28,HADHA,HADHB,C2orf18	AC015977.5,KCNK3,CENPA	NA	NA	NA	NA	KCNK3	33315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	26980806	26981182	26980970	Y	C2orf18	CENPA	OTOF,CENPA,C2orf70,CIB4,KCNK3,DPYSL5,MAPRE3,C2orf18	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CENPA	3975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	27005355	27005756	27005547	Y	NA	CENPA	NA	NA	NA	NA	CENPA	20198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	27304052	27304486	27304234	Y	CENPA,CENPA,DPYSL5,SLC5A6,PPM1G,GTF3C2,CAD,CGREF1	AGBL5,OST4,EMILIN1,KHK,CGREF1,ABHD1	NA	NA	NA	NA	KHK	3129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.773762617498741
chr2	27432989	27433207	27433072	Y	NA	SLC5A6,CAD	NA	NA	NA	NA	SLC5A6	619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	27543962	27544264	27544065	Y	NA	SLC30A3,TRIM54,MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17	NA	NA	NA	NA	MPV17	2283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr2	27557346	27557529	27557503	Y	DPYSL5,C2orf16	MPV17,AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513	NA	NA	NA	NA	MPV17	10799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	27614467	27614499	27614483	Y	EIF2B4,EIF2B4	AC074117.10,GTF3C2,EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1	NA	NA	NA	NA	FTH1P3	233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	27629706	27629770	27629738	Y	NA	EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1	NA	NA	NA	NA	PPM1G	784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	27631105	27631216	27631160	Y	C2orf16	EIF2B4,SNX17,ZNF513,FTH1P3,PPM1G,NRBP1	NA	NA	NA	NA	PPM1G	551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	27878874	27879165	27879028	Y	SLC5A6,GTF3C2,NRBP1,IFT172,BRE,BRE,ZNF512,GPN1,CCDC121,GPN1,CCDC121,SUPT7L,SLC4A1AP	GPN1,CCDC121,SLC4A1AP,SUPT7L	NA	NA	NA	NA	SLC4A1AP	5173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.353191626911766
chr2	27939397	27939784	27939607	Y	TRIM54	AC074091.13	RBKS,BRE,LOC100505716,FOSL2,PLB1	IMR90	Hi-C	24141950	AC074091.13	2798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	27960575	27961156	27960621	Y	RBKS	AC074091.13,MRPL33	BRE,PLB1,MRPL33,RBKS,LOC100505716,FOSL2	IMR90	Hi-C	24141950	AC074091.13	23976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	27988549	27989353	27988873	Y	NA	MRPL33	NA	NA	NA	NA	MRPL33	3231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28003613	28003725	28003670	Y	NA	MRPL33	NA	NA	NA	NA	MRPL33	11029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	28021914	28022357	28022176	Y	RBKS	MRPL33	NA	NA	NA	NA	MRPL33	29330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	28024813	28024890	28024852	Y	IFT172,ZNF512,GPN1,CCDC121,GPN1,CCDC121,SLC4A1AP,SUPT7L,MRPL33	MRPL33	NA	NA	NA	NA	MRPL33	32229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28077414	28077634	28077524	Y	ZNF513,ZNF513,RBKS	BRE,RBKS	MRPL33	IMR90	Hi-C	24141950	BRE	33174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	28134368	28134411	28134390	Y	NA	BRE,RBKS	NA	NA	NA	NA	RBKS	22403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28182324	28182658	28182394	Y	FOSL2,GCKR,RBKS	NA	NA	NA	NA	NA	RBKS	70359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	28215985	28216067	28216026	Y	NA	NA	NA	NA	NA	NA	RBKS	104020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28303771	28304058	28303879	Y	NA	NA	NA	NA	NA	NA	RBKS	191806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28319174	28319559	28319300	Y	NA	NA	NA	NA	NA	NA	RBKS	207209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	28400759	28401210	28400868	Y	RBKS,BRE,BRE,FOSL2	NA	NA	NA	NA	NA	FOSL2	212105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	28492364	28492732	28492561	Y	NA	NA	NA	NA	NA	NA	FOSL2	120583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28513236	28513438	28513331	Y	RBKS,PPP1CB,PPP1CB,FOSL2	NA	NA	NA	NA	NA	FOSL2	99877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28582195	28582710	28582283	Y	NA	FOSL2	NA	NA	NA	NA	FOSL2	30605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	28589661	28589896	28589794	Y	FOSL2	FOSL2	BRE,RBKS,FOSL2,GPN1,CCDC121,SLC4A1AP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FOSL2	23419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	28767576	28768254	28768064	Y	WDR43,TRMT61B,SPDYA	NA	NA	NA	NA	NA	FOSL2	154261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.900315534370491
chr2	28806831	28807046	28806964	Y	FOSL2	NA	NA	NA	NA	NA	PPP1CB	165460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	28844259	28844848	28844625	Y	FOSL2,TRMT61B,PPP1CB,PPP1CB	NA	NA	NA	NA	NA	PPP1CB	127658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	29009696	29009902	29009742	Y	FOSL2,PPP1CB,PPP1CB	PPP1CB	NA	NA	NA	NA	PPP1CB	37190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	29075660	29075992	29075826	Y	TRMT61B	TRMT61B,WDR43	NA	NA	NA	NA	TRMT61B	15175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	29331222	29331429	29331307	Y	NA	CLIP4	CLIP4	MCF7	ChIA-PET	22265404	CLIP4	12651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	29803354	29803753	29803678	Y	ALK	NA	NA	NA	NA	NA	CLIP4	484783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	30704285	30704557	30704478	Y	NA	LCLAT1	NA	NA	NA	NA	LCLAT1	36193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	30788063	30788262	30788163	Y	NA	NA	NA	NA	NA	NA	LCLAT1	119971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	30791728	30792075	30791902	Y	NA	NA	NA	NA	NA	NA	LCLAT1	123636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	30807812	30808169	30807846	Y	NA	NA	NA	NA	NA	NA	LCLAT1	139720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	30887906	30888094	30887998	Y	NA	NA	NA	NA	NA	NA	LCLAT1	219814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr2	30889265	30889652	30889547	Y	NA	NA	YPEL5,LBH,LCLAT1	IMR90	Hi-C	24141950	LCLAT1	221173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr2	32166229	32166498	32166237	Y	NA	NA	NA	NA	NA	NA	MEMO1	67801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	33163246	33163288	33163260	Y	NA	LTBP1	LTBP1	IMR90	Hi-C	24141950	LTBP1	6751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	33805444	33805464	33805454	Y	RASGRP3	FAM98A	NA	NA	NA	NA	FAM98A	16985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	33823609	33823729	33823667	Y	RASGRP3	FAM98A	NA	NA	NA	NA	FAM98A	1160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	33863068	33863290	33863179	Y	NA	FAM98A	NA	NA	NA	NA	FAM98A	40619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	36584242	36585529	36584872	Y	FEZ2,CRIM1	CRIM1	NA	NA	NA	NA	CRIM1	3173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.353683253084039
chr2	36603527	36603925	36603600	Y	NA	CRIM1	NA	NA	NA	NA	CRIM1	22458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	36688353	36688868	36688635	Y	NA	NA	NA	NA	NA	NA	CRIM1	107284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	36712578	36712925	36712822	Y	CRIM1,FEZ2	NA	NA	NA	NA	NA	CRIM1	131509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	36761840	36762400	36762263	Y	NA	NA	NA	NA	NA	NA	FEZ2	108830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	36790527	36791707	36791646	Y	NA	NA	NA	NA	NA	NA	FEZ2	79523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr2	36795570	36795942	36795825	Y	FEZ2	NA	NA	NA	NA	NA	FEZ2	75288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	37103475	37103824	37103655	Y	NA	NA	NA	NA	NA	NA	STRN	87791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	37116938	37117262	37117216	Y	NA	NA	NA	NA	NA	NA	STRN	74353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	37139828	37140219	37140054	Y	NA	NA	NA	NA	NA	NA	STRN	51396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	37383262	37383336	37383288	Y	NA	EIF2AK2,AC007390.4	NA	NA	NA	NA	EIF2AK2	1054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	37491311	37491687	37491498	Y	NA	CEBPZ	NA	NA	NA	NA	CEBPZ	34455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	37497492	37497655	37497574	Y	HEATR5B	CEBPZ	NA	NA	NA	NA	CEBPZ	40636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	37617673	37618124	37617783	Y	CDC42EP3,EIF2AK2	QPCT	NA	NA	NA	NA	QPCT	47956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	37789550	37789826	37789587	Y	EIF2AK2,CDC42EP3	NA	CDC42EP3,QPCT	IMR90	Hi-C	24141950	CDC42EP3	173785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	38120007	38120217	38120112	Y	FAM82A1	NA	CDC42EP3,QPCT,PRKD3,FAM82A1	IMR90	Hi-C	24141950	CDC42EP3	156396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	38146886	38147198	38147079	Y	NA	NA	CDC42EP3,QPCT	IMR90	Hi-C	24141950	CDC42EP3	183275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.457060129829843
chr2	38264530	38264933	38264752	Y	CDC42EP3	NA	NA	NA	NA	NA	RPL7P12	191777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	38552581	38552739	38552658	Y	NA	ATL2	NA	NA	NA	NA	ATL2	49688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	38599092	38599284	38599189	Y	FAM82A1	ATL2	NA	NA	NA	NA	ATL2	3143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	38724832	38725088	38724960	Y	ARHGEF33	RPLP0P6	ATL2	IMR90	Hi-C	24141950	RPLP0P6	17912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr2	38770175	38770358	38770267	Y	NA	NA	NA	NA	NA	NA	RPLP0P6	63255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr2	38894252	38894471	38894390	Y	ATL2,SRSF7,HNRPLL	GALM	NA	NA	NA	NA	GALM	3200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	38949741	38950194	38950072	Y	HNRPLL,SRSF7	SRSF7,GEMIN6	NA	NA	NA	NA	SRSF7	26442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	39063059	39063487	39063392	Y	NA	DHX57,MORN2	NA	NA	NA	NA	DHX57	37588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	39078847	39079086	39078967	Y	NA	DHX57,MORN2	NA	NA	NA	NA	DHX57	21989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	39079289	39079498	39079407	Y	SRSF7,ARHGEF33	DHX57,MORN2	NA	NA	NA	NA	DHX57	21577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	39334876	39335293	39335230	Y	NA	SOS1	NA	NA	NA	NA	SOS1	14193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	39340813	39341200	39341198	Y	NA	SOS1	NA	NA	NA	NA	SOS1	8286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	39443973	39444333	39444109	Y	SOS1	NA	NA	NA	NA	NA	SOS1	94487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	39665108	39665339	39665266	Y	NA	AC007246.3,MAP4K3	NA	NA	NA	NA	MAP4K3	2655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr2	39683895	39683929	39683912	Y	NA	AC007246.3,MAP4K3	NA	NA	NA	NA	MAP4K3	21442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	39722003	39722381	39722147	Y	NA	NA	NA	NA	NA	NA	MAP4K3	59550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	39727713	39727883	39727798	Y	NA	NA	NA	NA	NA	NA	MAP4K3	65260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	39732092	39732298	39732165	Y	MAP4K3	NA	NA	NA	NA	NA	MAP4K3	69639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	42068299	42068635	42068587	Y	NA	NA	EML4	IMR90	Hi-C	24141950	PKDCC	204525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	42278314	42278459	42278342	Y	NA	PKDCC	NA	NA	NA	NA	PKDCC	5154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	42332532	42332812	42332662	Y	EML4	NA	EML4,LOC388942	IMR90	Hi-C	24141950	PKDCC	59372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr2	42333001	42333603	42333353	Y	EML4	NA	EML4,LOC388942	IMR90	Hi-C	24141950	PKDCC	59841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.519513945273133
chr2	42351253	42351626	42351357	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	42864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	42354917	42355159	42355039	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	39331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.777053701076277
chr2	42356539	42356712	42356585	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	37778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	42359577	42359846	42359732	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	34644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	42360195	42360705	42360352	Y	EML4	EML4	EML4,COX7A2L,LOC388942	IMR90	Hi-C	24141950	EML4	33785	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.83990833245113
chr2	42363980	42364100	42364040	Y	NA	EML4	EML4,COX7A2L	IMR90	Hi-C	24141950	EML4	30390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	42364243	42364571	42364413	Y	NA	EML4	EML4,COX7A2L	IMR90	Hi-C	24141950	EML4	29919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.854134884801348
chr2	42368526	42368635	42368598	Y	NA	EML4	EML4,LOC388942,C2orf91,COX7A2L	IMR90	Hi-C	24141950	EML4	25855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr2	42368874	42369229	42369001	Y	EML4	EML4	EML4,LOC388942,C2orf91,COX7A2L	IMR90	Hi-C	24141950	EML4	25261	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19466462490603
chr2	42412542	42412681	42412587	Y	NA	EML4	NA	NA	NA	NA	EML4	18052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr2	42481657	42481775	42481735	Y	EML4	NA	NA	NA	NA	NA	EML4	87167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.404468743788376
chr2	42535809	42536204	42535901	Y	NA	NA	COX7A2L	IMR90	Hi-C	24141950	COX7A2L	114024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	42567305	42567366	42567336	Y	EML4	NA	NA	NA	NA	NA	COX7A2L	82862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	42696554	42696964	42696742	Y	NA	COX7A2L,KCNG3,MTA3	NA	NA	NA	NA	KCNG3	22273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	43020336	43020977	43020619	Y	HAAO	HAAO	NA	NA	NA	NA	HAAO	2603	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.65566756223044
chr2	43023230	43023314	43023309	Y	NA	HAAO	NA	NA	NA	NA	HAAO	5497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.299446069450204
chr2	43023531	43023735	43023679	Y	NA	HAAO	NA	NA	NA	NA	HAAO	5798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.256385584383049
chr2	43037224	43037999	43037611	Y	NA	HAAO	THADA,ZFP36L2,LOC100129726,HAAO	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	HAAO	19491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.872374043757388
chr2	43038629	43038924	43038876	Y	NA	HAAO	THADA,ZFP36L2,LOC100129726,HAAO,PLEKHH2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	HAAO	20896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.497160548139772
chr2	43151826	43152270	43152066	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	78930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.26756228294973
chr2	43152648	43152978	43152751	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	78222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.529375863067757
chr2	43153788	43153898	43153799	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	77302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.572927974307185
chr2	43155191	43155549	43155370	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	75651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	43157114	43157487	43157153	Y	NA	NA	ZFP36L2,LOC100129726,THADA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	73713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	43186488	43186945	43186694	Y	NA	AC016735.1	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	44255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.177498505320848
chr2	43197884	43198002	43197975	Y	NA	AC016735.1	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	33198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	43201925	43202517	43202160	Y	NA	AC016735.1	ZFP36L2,LOC100129726,THADA	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	28683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.978710987260416
chr2	43205442	43205824	43205685	Y	MTA3,HAAO	AC016735.1	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	25376	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.61827681429946
chr2	43206770	43207218	43206984	Y	HAAO	AC016735.1	ZFP36L2,LOC100129726,THADA	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC016735.1	23982	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.30896780384023
chr2	43245528	43245689	43245593	Y	NA	AC016735.1,AC016735.2	ZFP36L2,LOC100129726,THADA	IMR90	Hi-C	24141950	AC016735.1	14328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.323604850313496
chr2	43265724	43265951	43265843	Y	NA	AC016735.1,AC016735.2	ZFP36L2,LOC100129726,THADA	IMR90	Hi-C	24141950	AC016735.2	1038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	43267467	43267802	43267635	Y	NA	AC016735.1,AC016735.2	ZFP36L2,LOC100129726,THADA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC016735.2	2781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	43273834	43273859	43273847	Y	NA	AC016735.1,AC016735.2	ZFP36L2,LOC100129726,THADA	IMR90	Hi-C	24141950	AC016735.2	9148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	43379449	43379628	43379558	Y	ZFP36L2,THADA,THADA	NA	THADA,LOC100129726,ZFP36L2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	72120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	43385938	43386506	43386186	Y	OXER1,ZFP36L2	NA	THADA,LOC100129726,ZFP36L2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	65242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.867940121697744
chr2	43390138	43390489	43390286	Y	NA	NA	THADA,LOC100129726,ZFP36L2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	61259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.33379829653563
chr2	43396497	43396745	43396689	Y	OXER1,ZFP36L2	NA	LOC100129726,ZFP36L2,THADA	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZFP36L2	55003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	43401535	43402035	43401733	Y	OXER1,THADA,THADA,ZFP36L2	ZFP36L2	ZFP36L2,THADA,LOC100129726	K562,MCF7	ChIA-PET	22265404	ZFP36L2	49713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	43405877	43406433	43406206	Y	OXER1	ZFP36L2	ZFP36L2,THADA,LOC100129726	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZFP36L2	45315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	43421229	43421631	43421263	Y	HAAO,THADA,THADA	ZFP36L2	ZFP36L2,LOC100129726,THADA	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZFP36L2	30117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr2	43422005	43422472	43422185	Y	THADA,THADA,ZFP36L2	ZFP36L2	ZFP36L2,LOC100129726,THADA	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZFP36L2	29276	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.80375072163577
chr2	43434759	43434952	43434875	Y	OXER1	ZFP36L2	NA	NA	NA	NA	ZFP36L2	16796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	43437815	43438151	43437904	Y	OXER1,ZFP36L2	ZFP36L2	NA	NA	NA	NA	ZFP36L2	13597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	43527782	43528145	43528003	Y	NA	NA	LOC100129726,ZFP36L2	MCF7	ChIA-PET	22265404	ZFP36L2	76034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	43653578	43653957	43653847	Y	NA	NA	LOC100129726,ZFP36L2	MCF7	ChIA-PET	22265404	THADA	167228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	43672480	43672679	43672609	Y	NA	NA	NA	NA	NA	NA	THADA	148506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	44212195	44212421	44212308	Y	NA	LRPPRC	NA	NA	NA	NA	LRPPRC	8723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	44805618	44805736	44805677	Y	NA	NA	NA	NA	NA	NA	CAMKMT	218529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	44935582	44935781	44935667	Y	NA	NA	NA	NA	NA	NA	RP11-89K21.1	228557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	44996263	44996426	44996345	Y	NA	NA	NA	NA	NA	NA	RP11-89K21.1	167912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	45164818	45165169	45165126	Y	NA	RP11-89K21.1	NA	NA	NA	NA	RP11-89K21.1	480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	45225232	45225342	45225296	Y	NA	AC012354.8	NA	NA	NA	NA	AC012354.8	3680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	45999486	45999797	45999642	Y	NA	NA	NA	NA	NA	NA	PRKCE	123002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	46100592	46100616	46100604	Y	NA	NA	NA	NA	NA	NA	PRKCE	224108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	46265425	46265774	46265513	Y	NA	NA	NA	NA	NA	NA	EPAS1	253032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	46452124	46452363	46452229	Y	RHOQ	NA	PRKCE,EPAS1	IMR90	Hi-C	24141950	EPAS1	66443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	46456791	46456944	46456828	Y	NA	NA	PRKCE,EPAS1,PIGF	IMR90	Hi-C	24141950	EPAS1	61862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.358448703571195
chr2	46525633	46526278	46526263	Y	NA	EPAS1	NA	NA	NA	NA	EPAS1	6827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	46542401	46542637	46542520	Y	NA	EPAS1	NA	NA	NA	NA	EPAS1	23595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr2	46542843	46542999	46542890	Y	NA	EPAS1	NA	NA	NA	NA	EPAS1	24037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr2	46554101	46554217	46554159	Y	NA	EPAS1	NA	NA	NA	NA	EPAS1	35295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	46561811	46562247	46561970	Y	SOCS5,SOCS5	EPAS1	NA	NA	NA	NA	EPAS1	43005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	46614603	46614745	46614671	Y	RHOQ	NA	NA	NA	NA	NA	EPAS1	95797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	46636668	46636826	46636747	Y	NA	NA	EPAS1,PRKCE,RHOQ,PIGF,CRIPT	IMR90	Hi-C	24141950	EPAS1	117862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.93318206160831
chr2	46662046	46662321	46662184	Y	NA	NA	PRKCE,EPAS1,LOC388946,ATP6V1E2,RHOQ,PIGF,CRIPT	IMR90	Hi-C	24141950	RHOQ	104624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391155133064253
chr2	46797577	46797967	46797772	Y	NA	RHOQ,ATP6V1E2,CRIPT,PIGF	NA	NA	NA	NA	ATP6V1E2	29881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	46928465	46928698	46928588	Y	MCFD2,MCFD2,SOCS5,SOCS5	SOCS5	NA	NA	NA	NA	SOCS5	4374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	46993562	46993962	46993767	Y	NA	NA	NA	NA	NA	NA	SOCS5	69471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	46997897	46997963	46997932	Y	MCFD2,MCFD2,SOCS5,SOCS5	NA	NA	NA	NA	NA	SOCS5	73806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47027530	47027861	47027840	Y	NA	NA	LOC388948,SOCS5,CRIPT,LOC100134259,MCFD2,TTC7A	IMR90	Hi-C	24141950	SOCS5	103439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47031260	47031826	47031474	Y	NA	NA	LOC388948,SOCS5,CRIPT,LOC100134259,MCFD2,TTC7A	IMR90	Hi-C	24141950	SOCS5	107169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47171092	47171539	47171232	Y	TTC7A,MCFD2	TTC7A,MCFD2	NA	NA	NA	NA	MCFD2	4098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47194379	47194775	47194547	Y	RHOQ,TTC7A,MCFD2	MCFD2	NA	NA	NA	NA	MCFD2	27385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr2	47197841	47198107	47197954	Y	RHOQ,TTC7A,MCFD2	MCFD2	NA	NA	NA	NA	MCFD2	30847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr2	47210404	47210621	47210509	Y	RHOQ,TTC7A,MCFD2	MCFD2	NA	NA	NA	NA	MCFD2	43410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47213827	47213985	47213928	Y	NA	MCFD2	NA	NA	NA	NA	MCFD2	46833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47214273	47214540	47214407	Y	NA	MCFD2	NA	NA	NA	NA	MCFD2	47279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	47229826	47230084	47229931	Y	TTC7A	NA	NA	NA	NA	NA	MCFD2	62832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	47270774	47271231	47270943	Y	NA	NA	NA	NA	NA	NA	MCFD2	103780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr2	47296749	47297008	47296937	Y	NA	NA	NA	NA	NA	NA	CALM2	104732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr2	47297632	47297822	47297725	Y	NA	NA	NA	NA	NA	NA	CALM2	103918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.271013464272029
chr2	47298687	47298930	47298712	Y	TTC7A,MCFD2	NA	NA	NA	NA	NA	CALM2	102810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.271013464272029
chr2	47306951	47307378	47307182	Y	NA	NA	NA	NA	NA	NA	CALM2	94362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr2	47418967	47419222	47419129	Y	NA	CALM2,AC106869.2	TTC7A,C2orf61,SOCS5,MCFD2,CALM2,EPCAM	IMR90	Hi-C	24141950	CALM2	17227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr2	47420372	47420663	47420518	Y	NA	CALM2,AC106869.2	EPCAM,TTC7A,MCFD2,C2orf61,CALM2	IMR90	Hi-C	24141950	CALM2	18632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	47499706	47499760	47499719	Y	C2orf61	AC106869.2	TTC7A,CALM2,SOCS5,MCFD2,C2orf61	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC106869.2	48773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr2	47540250	47540463	47540357	Y	NA	AC073283.4,EPCAM	CALM2,TTC7A	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	AC073283.4	29750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	47979563	47979754	47979705	Y	NA	NA	KCNK12,MSH2,MSH6	IMR90	Hi-C	24141950	MSH6	58894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	48373241	48373406	48373298	Y	FOXN2	NA	FOXN2,PPP1R21	IMR90	Hi-C	24141950	FOXN2	166370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr2	48559553	48559778	48559608	Y	FOXN2	FOXN2,RNU4-49P	NA	NA	NA	NA	RNU4-49P	6187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	48584014	48584658	48584325	Y	FBXO11,FOXN2	FOXN2,RNU4-49P	NA	NA	NA	NA	RNU4-49P	18049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	48696599	48696946	48696773	Y	NA	PPP1R21	NA	NA	NA	NA	PPP1R21	30862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	48709527	48709805	48709665	Y	FOXN2,KLRAQ1	PPP1R21,STON1	NA	NA	NA	NA	PPP1R21	43790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr2	48718676	48719233	48718981	Y	NA	STON1	NA	NA	NA	NA	STON1	35289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	50951878	50951957	50951935	Y	NA	NA	NA	NA	NA	NA	STON1	2197356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	53079014	53079114	53079064	Y	NA	NA	NA	NA	NA	NA	CHAC2	913815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	53331505	53331666	53331586	Y	NA	NA	NA	NA	NA	NA	CHAC2	661263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	54019039	54019374	54019207	Y	ACYP2,ASB3,ASB3,GPR75	CHAC2,ERLEC1	NA	NA	NA	NA	ERLEC1	6858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	54022416	54022710	54022562	Y	NA	CHAC2,ERLEC1	NA	NA	NA	NA	ERLEC1	10235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	54054125	54054397	54054212	Y	NA	ERLEC1,GPR75,GPR75-ASB3,ASB3	NA	NA	NA	NA	GPR75	30729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.295012147390558
chr2	54196339	54196842	54196524	Y	ASB3,ASB3,PSME4	ACYP2,PSME4	NA	NA	NA	NA	PSME4	362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	54270419	54270555	54270547	Y	GPR75,ACYP2	NA	SPTBN1,EML6,PSME4,ACYP2	IMR90	Hi-C	24141950	PSME4	74442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	54285444	54285567	54285472	Y	NA	NA	SPTBN1,EML6,PSME4	IMR90	Hi-C	24141950	PSME4	89467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	54643124	54643489	54643323	Y	NA	SPTBN1	ACYP2,C2orf73,SPTBN1	IMR90	Hi-C	24141950	SPTBN1	37933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	54682152	54682577	54682442	Y	NA	SPTBN1	NA	NA	NA	NA	SPTBN1	730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.485492735008018
chr2	54714209	54714329	54714214	Y	NA	SPTBN1	NA	NA	NA	NA	SPTBN1	32787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	54751942	54752182	54752042	Y	NA	NA	NA	NA	NA	NA	SPTBN1	70520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	54786900	54787386	54787056	Y	NA	NA	NA	NA	NA	NA	SPTBN1	105478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.552712000938465
chr2	54787503	54787764	54787623	Y	RTN4,SPTBN1	NA	NA	NA	NA	NA	SPTBN1	106081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr2	54796924	54797237	54797074	Y	SPTBN1	NA	NA	NA	NA	NA	SPTBN1	115502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	54799241	54799892	54799606	Y	SPTBN1	NA	NA	NA	NA	NA	SPTBN1	117819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	54800045	54800558	54800206	Y	SPTBN1	NA	NA	NA	NA	NA	SPTBN1	118623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	54806978	54807402	54807168	Y	SPTBN1	NA	NA	NA	NA	NA	SPTBN1	125556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.322622109576149
chr2	54816609	54817000	54816923	Y	SPTBN1	NA	NA	NA	NA	NA	EML6	131636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	54971761	54972012	54971777	Y	NA	EML6	NA	NA	NA	NA	EML6	23125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	54977564	54977711	54977648	Y	TSPYL6,C2orf73	EML6	NA	NA	NA	NA	EML6	28928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	55249584	55250267	55249993	Y	NA	NA	NA	NA	NA	NA	RTN4	87490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	55338983	55339153	55339057	Y	CCDC88A,RTN4,RTN4	RTN4	C2orf63,RTN4,EML6	IMR90	Hi-C	24141950	RTN4	1226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	55360803	55361407	55361172	Y	SMEK2,CCDC88A,RTN4	RTN4	RTN4,C2orf63,EML6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RTN4	23046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	55364745	55365096	55365046	Y	NA	RTN4	RTN4,EML6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RTN4	26988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	55767070	55767336	55767332	Y	NA	CCDC104	NA	NA	NA	NA	CCDC104	22330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	56066410	56066608	56066510	Y	NA	NA	EFEMP1	IMR90	Hi-C	24141950	PNPT1	147365	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	57034024	57034047	57034036	Y	NA	NA	NA	NA	NA	NA	VRK2	1098739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	58105448	58105884	58105678	Y	NA	VRK2	FLJ30838	IMR90	Hi-C	24141950	VRK2	26902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	58271974	58272513	58272036	Y	NA	NA	NA	NA	NA	NA	VRK2	139188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	58384642	58384701	58384672	Y	NA	NA	NA	NA	NA	NA	FANCL	81806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	60962204	60962802	60962781	Y	NA	PAPOLG	NA	NA	NA	NA	PAPOLG	18563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr2	61126778	61127091	61126822	Y	REL	REL,RNU4-51P	NA	NA	NA	NA	RNU4-51P	9347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	61140048	61140151	61140100	Y	REL	REL,RNU4-51P	NA	NA	NA	NA	RNU4-51P	3610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	61165363	61165465	61165452	Y	NA	RNU4-51P	NA	NA	NA	NA	RNU4-51P	28925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	61184848	61185156	61185008	Y	NA	RNU4-51P	NA	NA	NA	NA	RNU4-51P	48410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	61204524	61204872	61204698	Y	NA	PEX13,PUS10	REL	IMR90	Hi-C	24141950	PEX13	37488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	61207503	61207627	61207564	Y	NA	PEX13,PUS10	NA	NA	NA	NA	PEX13	34733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr2	61428317	61428371	61428344	Y	USP34,AHSA2	AHSA2	NA	NA	NA	NA	AHSA2	25764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	61580039	61580318	61580309	Y	NA	NA	NA	NA	NA	NA	USP34	115586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	61698926	61699282	61699220	Y	PUS10,AHSA2,USP34	USP34	NA	NA	NA	NA	USP34	3022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.753386546385258
chr2	61748471	61748954	61748828	Y	NA	XPO1	NA	NA	NA	NA	XPO1	14807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	61757728	61758222	61758112	Y	NA	XPO1	NA	NA	NA	NA	XPO1	5539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	61766465	61766637	61766569	Y	AHSA2,USP34	XPO1	NA	NA	NA	NA	XPO1	2704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	61921641	61922071	61921953	Y	NA	NA	NA	NA	NA	NA	FAM161A	157207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr2	61990946	61991094	61991044	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	88184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr2	61991278	61991660	61991557	Y	NA	NA	XPO1,FAM161A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM161A	87618	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.32039489878519
chr2	62424513	62424632	62424578	Y	B3GNT2	B3GNT2	NA	NA	NA	NA	B3GNT2	3265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	62689007	62689250	62689129	Y	NA	TMEM17	EHBP1,COMMD1,OTX1,LOC100132215,TMEM17	IMR90	Hi-C	24141950	TMEM17	47779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	62753696	62753810	62753753	Y	NA	TMEM17	TMEM17	IMR90	Hi-C	24141950	TMEM17	16667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.296326416555416
chr2	62803591	62803729	62803643	Y	NA	NA	EHBP1	IMR90	Hi-C	24141950	TMEM17	66562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	62805190	62805410	62805295	Y	NA	NA	EHBP1	IMR90	Hi-C	24141950	TMEM17	68161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.281698536666436
chr2	62806044	62806443	62806244	Y	NA	NA	EHBP1	IMR90	Hi-C	24141950	TMEM17	69015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	63023345	63023597	63023471	Y	NA	NA	NA	NA	NA	NA	EHBP1	124359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr2	63122149	63122353	63122251	Y	EHBP1,EHBP1,OTX1	NA	NA	NA	NA	NA	OTX1	152839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	63285480	63285937	63285754	Y	OTX1	OTX1	NA	NA	NA	NA	OTX1	10288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	63452850	63453196	63453026	Y	NA	NA	NA	NA	NA	NA	OTX1	177658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	63601034	63601048	63601041	Y	NA	NA	NA	NA	NA	NA	MDH1	212695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	64245195	64245602	64245370	Y	NA	VPS54	NA	NA	NA	NA	VPS54	989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	64291243	64291430	64291349	Y	NA	VPS54	LINC00309,PELI1	IMR90	Hi-C	24141950	VPS54	47037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	64352533	64352773	64352693	Y	NA	PELI1	NA	NA	NA	NA	PELI1	16815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	64360908	64361228	64361132	Y	NA	PELI1	NA	NA	NA	NA	PELI1	8360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	64364775	64365257	64365170	Y	NA	PELI1	NA	NA	NA	NA	PELI1	4331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	64756167	64756526	64756224	Y	NA	AFTPH	NA	NA	NA	NA	AFTPH	6702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	64772977	64773339	64773158	Y	SLC1A4,AFTPH	AFTPH	NA	NA	NA	NA	AFTPH	23512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	64836549	64836646	64836605	Y	SLC1A4,PELI1,SERTAD2,AFTPH	NA	NA	NA	NA	NA	AFTPH	87084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	64879120	64879608	64879340	Y	NA	NA	LOC339807	IMR90	Hi-C	24141950	SERTAD2	96531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	64879615	64879792	64879667	Y	SERTAD2	NA	LOC339807	IMR90	Hi-C	24141950	SERTAD2	96347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	64894012	64894430	64894356	Y	NA	NA	SERTAD2,AFTPH	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	SERTAD2	81709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	64925964	64926159	64926058	Y	SLC1A4,RAB1A,AFTPH,SERTAD2	SERTAD2	SERTAD2	IMR90	Hi-C	24141950	SERTAD2	49980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	64957479	64957902	64957679	Y	NA	SERTAD2	SERTAD2,AFTPH,LOC339807	IMR90	Hi-C	24141950	SERTAD2	18237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	64978173	64978610	64978385	Y	CEP68	SERTAD2	SERTAD2,LOC339807,AFTPH	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	2034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314073949339183
chr2	64994926	64995226	64995021	Y	SLC1A4,RAB1A,ACTR2,AFTPH,SERTAD2	SERTAD2	SERTAD2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERTAD2	18787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	65058327	65058875	65058618	Y	AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2	NA	SERTAD2	IMR90	Hi-C	24141950	SERTAD2	82188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	65065938	65066285	65066136	Y	AFTPH,SERTAD2,SLC1A4,RAB1A,ACTR2	NA	SERTAD2,LOC339807,AFTPH	IMR90	Hi-C	24141950	SERTAD2	89799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	65086968	65087262	65087080	Y	AFTPH,SERTAD2,RAB1A,ACTR2	NA	SERTAD2,LOC339807,AFTPH	IMR90	Hi-C	24141950	SERTAD2	110829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	65214378	65214996	65214823	Y	NA	SLC1A4	NA	NA	NA	NA	SLC1A4	767	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146437361812958
chr2	65221577	65221744	65221661	Y	NA	SLC1A4	NA	NA	NA	NA	SLC1A4	7966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	65303160	65303240	65303200	Y	SERTAD2,SLC1A4,ACTR2,RAB1A	CEP68	NA	NA	NA	NA	CEP68	21660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	65326595	65326952	65326834	Y	NA	CEP68,RAB1A	NA	NA	NA	NA	RAB1A	28288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	65328578	65328848	65328754	Y	NA	CEP68,RAB1A	NA	NA	NA	NA	RAB1A	26392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	65583296	65583698	65583484	Y	NA	NA	NA	NA	NA	NA	SPRED2	74073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	65609993	65610402	65610168	Y	NA	SPRED2	NA	NA	NA	NA	SPRED2	47369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	65656801	65657217	65657146	Y	NA	SPRED2	NA	NA	NA	NA	SPRED2	554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	65657861	65658229	65658008	Y	SLC1A4,SPRED2,SPRED2	SPRED2	NA	NA	NA	NA	SPRED2	90	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.944358760174991
chr2	67625110	67625487	67625291	Y	ETAA1	ETAA1	NA	NA	NA	NA	ETAA1	2659	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.08068380781505
chr2	68263709	68263719	68263714	Y	NA	NA	NA	NA	NA	NA	C1D	72361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	68278313	68278683	68278526	Y	NA	NA	NA	NA	NA	NA	C1D	57397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	68428934	68429266	68429100	Y	NA	WDR92,PNO1	NA	NA	NA	NA	PNO1	45958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr2	68432380	68432395	68432387	Y	NA	WDR92,PNO1,PPP3R1	NA	NA	NA	NA	PPP3R1	48974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	68472906	68473226	68473141	Y	PPP3R1	PPP3R1	NA	NA	NA	NA	PPP3R1	8143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr2	69135600	69135857	69135778	Y	NA	NA	ARHGAP25,APLF,FBXO48,BMP10	IMR90	Hi-C	24141950	ANTXR1	102453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	69309666	69309994	69309927	Y	NA	NA	NA	NA	NA	NA	ANTXR1	71356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	69390293	69390547	69390355	Y	ARHGAP25,ARHGAP25	NA	NA	NA	NA	NA	ANTXR1	151983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	69419782	69420224	69419939	Y	NA	NA	NA	NA	NA	NA	ANTXR1	181472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	69533941	69534050	69534019	Y	ANTXR1	NA	NA	NA	NA	NA	GFPT1	78332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	69663778	69663884	69663817	Y	AAK1	NFU1	NA	NA	NA	NA	NFU1	1018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	69750715	69750748	69750731	Y	NA	NA	NA	NA	NA	NA	NFU1	87955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	69857892	69858266	69858093	Y	NA	ANXA4,AAK1	NA	NA	NA	NA	ANXA4	11291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	69981246	69981481	69981365	Y	MXD1	NA	GMCL1	IMR90	Hi-C	24141950	GMCL1	73293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	69989990	69990667	69990520	Y	NA	NA	GMCL1	IMR90	Hi-C	24141950	GMCL1	64107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	69997386	69997753	69997552	Y	PCBP1,MXD1	NA	NA	NA	NA	NA	GMCL1	57021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	70000495	70000634	70000556	Y	MXD1	NA	NA	NA	NA	NA	GMCL1	54140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	70004336	70004726	70004528	Y	NA	NA	NA	NA	NA	NA	GMCL1	50048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	70048617	70048893	70048741	Y	ANXA4	GMCL1	NA	NA	NA	NA	GMCL1	5881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	70057532	70057914	70057667	Y	C2orf42,AAK1,GMCL1	GMCL1	NA	NA	NA	NA	GMCL1	2758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr2	70141198	70141461	70141241	Y	NA	SNRNP27,MXD1,ASPRV1	NA	NA	NA	NA	MXD1	18378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	70144957	70145388	70145176	Y	PCBP1,GMCL1,MXD1,ASPRV1	SNRNP27,MXD1,ASPRV1	NA	NA	NA	NA	MXD1	22137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	70154281	70154743	70154417	Y	PCBP1,GMCL1,MXD1,ASPRV1	SNRNP27,MXD1,ASPRV1	NA	NA	NA	NA	MXD1	31461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr2	70173540	70174234	70173890	Y	PCBP1,GMCL1,MXD1,ASPRV1	ASPRV1	NA	NA	NA	NA	ASPRV1	13163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	70174757	70175015	70174885	Y	PCBP1,GMCL1,MXD1,ASPRV1	ASPRV1	NA	NA	NA	NA	ASPRV1	12382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	70226418	70226806	70226612	Y	PCBP1,GMCL1,MXD1,ASPRV1	ASPRV1	NA	NA	NA	NA	ASPRV1	39021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	70229859	70229868	70229864	Y	PCBP1,GMCL1,MXD1,ASPRV1	ASPRV1	NA	NA	NA	NA	ASPRV1	42462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	70270545	70270983	70270722	Y	MXD1,ASPRV1,C2orf42,PCBP1	PCBP1,PCBP1-AS1	NA	NA	NA	NA	PCBP1	41602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	70273102	70273420	70273221	Y	GMCL1,MXD1,ASPRV1,PCBP1	PCBP1,PCBP1-AS1	NA	NA	NA	NA	PCBP1	39165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	70285414	70285703	70285559	Y	NA	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	PCBP1	26882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	70294861	70295138	70295000	Y	NA	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	PCBP1	17447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	70296121	70296604	70296392	Y	GMCL1,MXD1,ASPRV1,C2orf42,PCBP1	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	PCBP1	15981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	70331843	70331986	70331900	Y	NA	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	AC016700.3	3491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	70335985	70336314	70336204	Y	AAK1,C2orf42,PCBP1	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	AC016700.3	7633	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.71105891728437
chr2	70346022	70346119	70346054	Y	NA	PCBP1,PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	AC016700.3	17670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr2	70363059	70363462	70363144	Y	MXD1,C2orf42,PCBP1	PCBP1-AS1,AC016700.4,AC016700.3	NA	NA	NA	NA	AC016700.3	34707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	70388970	70389092	70389031	Y	NA	NA	NA	NA	NA	NA	AC016700.3	60618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	70784432	70784674	70784554	Y	NA	TGFA	TGFA	K562	ChIA-PET	22265404	TGFA	5107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr2	71129017	71129173	71129049	Y	NA	VAX2,ATP6V1B1	NA	NA	NA	NA	VAX2	3297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr2	71228347	71228418	71228366	Y	ANKRD53	ANKRD53,TEX261	TEX261	MCF7,K562	ChIA-PET	22265404	TEX261	8272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	71725442	71725771	71725690	Y	DYSF	NA	NA	NA	NA	NA	ZNF638	223751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	72416850	72417011	72416931	Y	NA	NA	NA	NA	NA	NA	EXOC6B	634159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	72732418	72732763	72732614	Y	NA	NA	NA	NA	NA	NA	EXOC6B	318407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	73402910	73403369	73403123	Y	SFXN5	RAB11FIP5,SMYD5	EMX1,RAB11FIP5,SFXN5,NOTO,PRADC1,CCT7,SMYD5	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RAB11FIP5	21061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	74060180	74060503	74060342	Y	NA	STAMBP	NA	NA	NA	NA	STAMBP	6094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	74152201	74152400	74152268	Y	NA	ACTG2,DGUOK	NA	NA	NA	NA	DGUOK	248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr2	74153090	74153262	74153147	Y	NA	ACTG2,DGUOK	NA	NA	NA	NA	DGUOK	1137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	74259703	74260366	74260024	Y	NA	AC073046.25,TET3	TET3,ACTG2,BOLA3	IMR90	Hi-C	24141950	TET3	31863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	74297420	74297667	74297536	Y	MOBKL1B	FNBP1P1	NA	NA	NA	NA	FNBP1P1	48140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	74616605	74616668	74616637	Y	NA	DCTN1,C2orf81,WDR54	NA	NA	NA	NA	DCTN1	546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	74722835	74723021	74722928	Y	NA	INO80B,WBP1,MOGS,MRPL53,TTC31,CCDC142,LBX2,PCGF1,DQX1,HTRA2,AUP1	NA	NA	NA	NA	LBX2	5422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	74801154	74801351	74801200	Y	DOK1	DQX1,HTRA2,AUP1,DOK1,LOXL3	NA	NA	NA	NA	LOXL3	20337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	74804828	74804964	74804881	Y	MOBKL1B,DOK1	AUP1,DOK1,LOXL3	NA	NA	NA	NA	LOXL3	24011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75043732	75043824	75043778	Y	NA	HK2	HK2,SEMA4F	IMR90	Hi-C	24141950	HK2	15284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	75063027	75063135	75063034	Y	HK2	HK2	NA	NA	NA	NA	HK2	3919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	75089962	75090221	75090092	Y	HK2	HK2	NA	NA	NA	NA	HK2	30854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75103488	75103536	75103515	Y	LBX2,HK2	HK2,AC104135.3	NA	NA	NA	NA	AC104135.3	39739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75141745	75142080	75142074	Y	NA	AC104135.3,POLE4	NA	NA	NA	NA	AC104135.3	1195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75172635	75172664	75172650	Y	NA	AC104135.3,POLE4	POLE4,TACR1,HK2	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	POLE4	10955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75498571	75498680	75498627	Y	NA	NA	TACR1	IMR90	Hi-C	24141950	TACR1	73745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	75770641	75770653	75770647	Y	NA	NA	NA	NA	NA	NA	MRPL19	101256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	75775367	75775568	75775468	Y	NA	NA	NA	NA	NA	NA	MRPL19	96341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	75779311	75779317	75779314	Y	NA	NA	NA	NA	NA	NA	MRPL19	92592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	75798121	75798484	75798332	Y	NA	NA	NA	NA	NA	NA	MRPL19	73425	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.94805117129128
chr2	75836166	75836348	75836343	Y	NA	MRPL19	FAM176A,TACR1	IMR90	Hi-C	24141950	MRPL19	35561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr2	75894065	75894458	75894192	Y	NA	MRPL19,GCFC2	NA	NA	NA	NA	MRPL19	22156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	75903279	75903482	75903481	Y	C2orf3,C2orf3	MRPL19,GCFC2	NA	NA	NA	NA	MRPL19	31370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	75912574	75912759	75912685	Y	NA	MRPL19,GCFC2	NA	NA	NA	NA	GCFC2	23356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	77377674	77377853	77377764	Y	LRRTM4	NA	NA	NA	NA	NA	AC105399.2	635655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	78055629	78055831	78055731	Y	NA	AC105399.2	NA	NA	NA	NA	AC105399.2	42121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr2	78328146	78328439	78328293	Y	NA	NA	NA	NA	NA	NA	AC105399.2	314638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr2	78386991	78387304	78387148	Y	NA	NA	NA	NA	NA	NA	AC105399.2	373483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	78401270	78401306	78401289	Y	NA	NA	NA	NA	NA	NA	AC105399.2	387762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233872601112125
chr2	78464924	78465229	78465077	Y	NA	NA	NA	NA	NA	NA	AC105399.2	451416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	78478830	78479153	78479031	Y	NA	NA	NA	NA	NA	NA	AC105399.2	465322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.939592798080634
chr2	78486500	78486864	78486682	Y	NA	NA	NA	NA	NA	NA	AC105399.2	472992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr2	78525487	78525634	78525561	Y	NA	NA	NA	NA	NA	NA	AC105399.2	511979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	78631329	78631672	78631604	Y	NA	NA	NA	NA	NA	NA	AC105399.2	617821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149888543135257
chr2	78632836	78632912	78632895	Y	NA	NA	NA	NA	NA	NA	AC105399.2	619328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276601557751769
chr2	78683398	78683574	78683486	Y	NA	NA	NA	NA	NA	NA	AC105399.2	669890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr2	80009885	80010107	80009996	Y	NA	NA	NA	NA	NA	NA	AC016716.1	378154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	84683355	84683532	84683444	Y	NA	SUCLG1	NA	NA	NA	NA	SUCLG1	1637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	85147093	85147556	85147171	Y	TMSB10	TMSB10,KCMF1	NA	NA	NA	NA	TMSB10	16344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.371270688123044
chr2	85151844	85152193	85152004	Y	NA	TMSB10,KCMF1	NA	NA	NA	NA	TMSB10	21095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	85154234	85154422	85154323	Y	NA	TMSB10,KCMF1	NA	NA	NA	NA	TMSB10	23485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.306679960522312
chr2	85173188	85173797	85173736	Y	TMSB10	TMSB10,KCMF1	KCMF1,TMSB10	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KCMF1	22419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.425667969501642
chr2	85267777	85267839	85267811	Y	NA	NA	NA	NA	NA	NA	LSM3P3	59978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	85567649	85568034	85567918	Y	NA	TGOLN2,ELMOD3,RETSAT	TGOLN2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ELMOD3	11483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr2	85673142	85673285	85673214	Y	NA	NA	NA	NA	NA	NA	MAT2A	91003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr2	85726317	85726428	85726373	Y	CAPG,VAMP8	MAT2A	TMEM150A,USP39,SH2D6,MAT2A,LOC100630918,TGOLN2,RETSAT,GGCX,VAMP5,VAMP8,RNF181,CAPG,C2orf68	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	MAT2A	37860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	85764802	85765239	85764815	Y	SH2D6,USP39	MAT2A,GGCX,VAMP8,VAMP5	NA	NA	NA	NA	MAT2A	514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.773270991326468
chr2	85887180	85887589	85887391	Y	SH2D6,SFTPB	C2orf68	NA	NA	NA	NA	C2orf68	49991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	85956315	85956539	85956423	Y	SH2D6	RNU1-38P,ATOH8	ATOH8,POLR1A,USP39,C2orf68,SFTPB,LOC284950,ST3GAL5,LOC90784,PTCD3	IMR90	Hi-C	24141950	RNU1-38P	2855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	85969500	85969917	85969748	Y	VAMP5,TMEM150A,ATOH8	RNU1-38P,ATOH8	ATOH8,POLR1A,USP39,C2orf68,SFTPB,LOC284950,ST3GAL5,LOC90784,PTCD3	IMR90	Hi-C	24141950	ATOH8	6550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr2	85993562	85993638	85993601	Y	NA	RNU1-38P,ATOH8	NA	NA	NA	NA	ATOH8	17095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	86284876	86285205	86285126	Y	NA	POLR1A,PTCD3	NA	NA	NA	NA	POLR1A	46073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	86388217	86388607	86388413	Y	NA	SNORD94,IMMT,MRPL35	NA	NA	NA	NA	SNORD94	27224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	86722014	86722392	86722297	Y	RMND5A	NA	NA	NA	NA	NA	KDM3A	56244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	86722974	86723324	86723287	Y	NA	NA	NA	NA	NA	NA	KDM3A	57204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	86761300	86761347	86761323	Y	REEP1,REEP1	NA	NA	NA	NA	NA	RNF103	87642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	86922220	86922584	86922381	Y	NA	RMND5A,CHMP3,RNF103-CHMP3	NA	NA	NA	NA	RMND5A	22712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr2	88353539	88354148	88353800	Y	KRCC1	RNU2-63P,KRCC1	NA	NA	NA	NA	KRCC1	291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr2	88590567	88590888	88590740	Y	C2orf51	NA	NA	NA	NA	NA	THNSL2	122732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	88803075	88803473	88803273	Y	FOXI3,C2orf51	AC104134.2	C2orf51	IMR90	Hi-C	24141950	AC104134.2	32765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	88959127	88959352	88959240	Y	NA	EIF2AK3,RPIA	EIF2AK3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPIA	29810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	90485310	90485405	90485339	Y	NA	NA	NA	NA	NA	NA	RPIA	1496148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	91815672	91815808	91815787	Y	NA	NA	NA	NA	NA	NA	RPIA	2826510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	91815826	91816191	91816014	Y	NA	NA	NA	NA	NA	NA	RPIA	2826664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	91821438	91821799	91821741	Y	NA	NA	NA	NA	NA	NA	RPIA	2832276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	91845288	91845519	91845445	Y	NA	NA	NA	NA	NA	NA	RPIA	2856126	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.56001569112182
chr2	91936197	91936406	91936290	Y	NA	NA	NA	NA	NA	NA	RPIA	2947035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr2	91954549	91954973	91954634	Y	NA	NA	NA	NA	NA	NA	RPIA	2965387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	96995983	96996007	96995995	Y	ITPRIPL1,ITPRIPL1	SNRNP200,AC021188.4,ITPRIPL1,NCAPH	NA	NA	NA	NA	NCAPH	3518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	97012594	97012961	97012778	Y	ASTL	SNRNP200,AC021188.4,ITPRIPL1,NCAPH	NA	NA	NA	NA	NCAPH	13069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	97151625	97152085	97151839	Y	ASTL,DUSP2,TMEM127,KIAA1310,CNNM4,ARID5A	NEURL3,ARID5A	NA	NA	NA	NA	NEURL3	19761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	97171611	97171894	97171753	Y	NA	ARID5A	NA	NA	NA	NA	NEURL3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	97204407	97205263	97204568	Y	NA	NEURL3,ARID5A	NA	NA	NA	NA	ARID5A	3927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr2	97222458	97223029	97222771	Y	DUSP2,TMEM127,KIAA1310,CNNM4,ARID5A	ARID5A	NA	NA	NA	NA	ARID5A	21978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr2	97291626	97292008	97291852	Y	NA	KANSL3	NA	NA	NA	NA	KANSL3	14516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	97472369	97472711	97472456	Y	ANKRD36,ARID5A,KIAA1310,CNNM3	CNNM4,CNNM3,ANKRD23,ANKRD39	CNNM3	IMR90	Hi-C	24141950	CNNM3	7271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	97522669	97523105	97522935	Y	NA	CNNM3,ANKRD23,ANKRD39,SEMA4C	NA	NA	NA	NA	ANKRD39	837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	98367978	98368166	98368128	Y	TMEM131,ANKRD36B,ZAP70,ZAP70	ZAP70	NA	NA	NA	NA	ZAP70	39955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	98443211	98443622	98443475	Y	NA	NA	NA	NA	NA	NA	ZAP70	115188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	98465985	98466159	98466067	Y	NA	NA	NA	NA	NA	NA	ZAP70	137962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	98485830	98486136	98485916	Y	NA	NA	NA	NA	NA	NA	TMEM131	124252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	98598628	98598759	98598694	Y	NA	TMEM131	NA	NA	NA	NA	TMEM131	11629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	98822932	98823207	98823080	Y	NA	NA	NA	NA	NA	NA	CNGA3	137411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr2	99064911	99065194	99064955	Y	MGAT4A,MGAT4A,INPP4A	INPP4A	NA	NA	NA	NA	INPP4A	5594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	99121825	99122251	99122089	Y	INPP4A	NA	NA	NA	NA	NA	INPP4A	62508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	99173119	99173416	99173284	Y	INPP4A	COA5,UNC50	UNC50,COA5	IMR90	Hi-C	24141950	COA5	49562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	99250910	99251133	99251091	Y	NA	COA5,UNC50	NA	NA	NA	NA	UNC50	27868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	99287467	99287477	99287472	Y	CNGA3	NA	NA	NA	NA	NA	MGAT4A	58112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	99318923	99319110	99319017	Y	NA	MGAT4A	NA	NA	NA	NA	MGAT4A	26479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	99344413	99344676	99344545	Y	INPP4A,MGAT4A	MGAT4A	NA	NA	NA	NA	MGAT4A	913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	100026434	100026453	100026444	Y	NA	NA	NA	NA	NA	NA	TXNDC9	71269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	100061589	100061940	100061765	Y	NA	REV1	NA	NA	NA	NA	REV1	42557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	100082054	100082282	100082201	Y	NA	REV1	NA	NA	NA	NA	REV1	22215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	100104968	100105518	100105262	Y	REV1	REV1	NA	NA	NA	NA	REV1	471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.618616997704054
chr2	100685193	100685529	100685389	Y	AFF3	NA	NA	NA	NA	NA	CHST10	346589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	100937334	100937484	100937407	Y	LONRF2	NA	NA	NA	NA	NA	CHST10	94634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	101397207	101397582	101397418	Y	C2orf29	NPAS2	NPAS2,RPL31,TBC1D8	IMR90	Hi-C	24141950	NPAS2	37032	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.77992346919999
chr2	101435496	101435968	101435616	Y	NPAS2	NPAS2	NA	NA	NA	NA	NPAS2	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.625027734176379
chr2	101669826	101670190	101670079	Y	TBC1D8	NA	NA	NA	NA	NA	RPL31	53649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	101680419	101680493	101680454	Y	NA	NA	NA	NA	NA	NA	RPL31	64242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	101712877	101712902	101712892	Y	NA	NA	NA	NA	NA	NA	RPL31	96700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr2	101872333	101872649	101872491	Y	RNF149	TBC1D8,SNORD89	NA	NA	NA	NA	TBC1D8	5005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	101922561	101923216	101923063	Y	NA	SNORD89	NA	NA	NA	NA	RNF149	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	101923239	101923757	101923472	Y	RPL31,MAP4K4,MAP4K4,RNF149	SNORD89,RNF149	NA	NA	NA	NA	RNF149	76	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	101946998	101947171	101947106	Y	MAP4K4,MAP4K4,RNF149	RNF149	NA	NA	NA	NA	RNF149	23835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.28777825631845
chr2	102133779	102134093	102133972	Y	MAP4K4,MAP4K4	NA	MAP4K4,RFX8,CREG2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CREG2	131722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	102134407	102134716	102134504	Y	NA	NA	MAP4K4,RFX8,CREG2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CREG2	132350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	102173496	102173792	102173644	Y	NA	NA	MAP4K4,RFX8,CREG2	IMR90	Hi-C	24141950	MAP4K4	137520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr2	102241918	102242303	102242103	Y	RNF149,IL1R2,MAP4K4,MAP4K4	NA	RFX8,MAP4K4,CREG2	IMR90	Hi-C	24141950	MAP4K4	69009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	102243895	102244327	102243955	Y	RNF149,MAP4K4,MAP4K4	NA	RFX8,MAP4K4,CREG2	IMR90	Hi-C	24141950	MAP4K4	66985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	102333492	102333834	102333706	Y	IL1R1,RNF149,IL1R2,MAP4K4,MAP4K4	MAP4K4	NA	NA	NA	NA	MAP4K4	22180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	102339341	102339788	102339615	Y	IL1R1,RNF149,MAP4K4,MAP4K4	MAP4K4	NA	NA	NA	NA	MAP4K4	28029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	102353138	102353817	102353456	Y	IL1R1,RNF149,MAP4K4,MAP4K4	MAP4K4	NA	NA	NA	NA	MAP4K4	41826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	102368893	102369115	102369004	Y	NA	NA	NA	NA	NA	NA	MAP4K4	57581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	102382879	102383094	102382925	Y	NA	NA	NA	NA	NA	NA	MAP4K4	71567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102383406	102383725	102383568	Y	MAP4K4,MAP4K4	NA	NA	NA	NA	NA	MAP4K4	72094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.932199832478165
chr2	102399741	102400097	102399970	Y	NA	NA	NA	NA	NA	NA	MAP4K4	88429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102515032	102515286	102515160	Y	IL1R2	NA	NA	NA	NA	NA	IL1R1	163718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102604405	102604499	102604418	Y	NA	NA	NA	NA	NA	NA	IL1R1	74505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	102647669	102647785	102647677	Y	NA	IL1R1	NA	NA	NA	NA	IL1R1	31219	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.37775173531382
chr2	102649919	102650192	102650054	Y	IL1RL2,IL1R1,IL18RAP,IL18R1,MAP4K4,MAP4K4,IL1R2	IL1R1	NA	NA	NA	NA	IL1R1	28812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr2	102711352	102711649	102711577	Y	IL1R1,MAP4K4,MAP4K4	IL1R1	IL1R2,MAP4K4,IL1RL2	IMR90	Hi-C	24141950	IL1R1	32348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	102712603	102712733	102712668	Y	IL1R1,MAP4K4,MAP4K4	IL1R1	IL1R2,MAP4K4,IL1RL2	IMR90	Hi-C	24141950	IL1R1	33599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	102722636	102722783	102722710	Y	NA	IL1R1	IL1RL2,IL1R1	IMR90	Hi-C	24141950	IL1R1	43632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102744285	102744459	102744372	Y	IL1R1,MAP4K4,MAP4K4	NA	IL1RL2,IL1R2,IL1R1,IL1RL1,IL18RAP	IMR90	Hi-C	24141950	IL1R1	65281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102825978	102826306	102826015	Y	NA	NA	NA	NA	NA	NA	IL1RL1	99656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	102844003	102844653	102844435	Y	IL1R2,IL18RAP,IL1R1	NA	NA	NA	NA	NA	IL1RL1	81309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	102857184	102857493	102857313	Y	IL1R2,IL18RAP,IL1R1	NA	NA	NA	NA	NA	IL1RL1	68469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	103280963	103281189	103281017	Y	IL1RL2,SLC9A2	NA	NA	NA	NA	NA	MFSD9	70158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	103390349	103390733	103390541	Y	NA	MFSD9,TMEM182	NA	NA	NA	NA	TMEM182	38982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	105459435	105459826	105459464	Y	GPR45,POU3F3	NA	NA	NA	NA	NA	MRPS9	192615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	105655685	105655967	105655739	Y	NA	MRPS9	NA	NA	NA	NA	MRPS9	3244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	105913488	105913594	105913541	Y	NA	TGFBRAP1,C2orf49	NA	NA	NA	NA	TGFBRAP1	30897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	105973379	105973614	105973553	Y	NA	TGFBRAP1,C2orf49	NA	NA	NA	NA	C2orf49	21563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	106020631	106021071	106020783	Y	FHL2,FHL2	FHL2	NA	NA	NA	NA	FHL2	31899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	106364522	106364900	106364611	Y	TGFBRAP1,C2orf49,NCK2	NCK2	NA	NA	NA	NA	NCK2	5168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	106474357	106474542	106474414	Y	NA	NA	NA	NA	NA	NA	NCK2	115003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr2	106545066	106545218	106545146	Y	NA	NA	LOC285000	IMR90	Hi-C	24141950	NCK2	185712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	106755891	106756182	106756037	Y	NA	NA	NA	NA	NA	NA	UXS1	52613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	106761137	106761371	106761251	Y	NCK2	UXS1	NA	NA	NA	NA	UXS1	47424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	109201604	109202307	109201998	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	52747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	109206329	109206788	109206425	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	57472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	109210699	109211038	109210811	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	61842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr2	109211421	109211903	109211563	Y	LIMS1,RANBP2,LIMS1,LIMS1	NA	NA	NA	NA	NA	LIMS1	62564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	109228635	109228941	109228810	Y	GCC2,RANBP2,LIMS1	NA	NA	NA	NA	NA	LIMS1	79778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	109686360	109686496	109686432	Y	NA	NA	MALL,SEPT10,SH3RF3,EDAR	IMR90	Hi-C	24141950	CCDC138	285147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	109883526	109883741	109883650	Y	NA	NA	NA	NA	NA	NA	CCDC138	482313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	109934621	109934818	109934675	Y	NA	NA	NA	NA	NA	NA	SEPT10	434965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	110318153	110318301	110318244	Y	NA	NA	NA	NA	NA	NA	SEPT10	51482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	110402204	110402551	110402400	Y	NA	SEPT10,SOWAHC	SEPT10,SOWAHC	IMR90	Hi-C	24141950	SOWAHC	32293	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.48244288122448
chr2	110431985	110432251	110432119	Y	NA	NA	EDAR,SEPT10	IMR90	Hi-C	24141950	SOWAHC	62074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	110859077	110859497	110859213	Y	NA	NA	NA	NA	NA	NA	NPHP1	101146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	110863536	110863928	110863763	Y	MALL	NA	NA	NA	NA	NA	NPHP1	96715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	111879046	111879315	111879118	Y	NA	BCL2L11	NA	NA	NA	NA	BCL2L11	4091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	112375521	112375561	112375551	Y	NA	NA	NA	NA	NA	NA	MIR4435-1HG	124844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	112376562	112376898	112376751	Y	BCL2L11	NA	ACOXL	IMR90	Hi-C	24141950	MIR4435-1HG	125885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	112417011	112417329	112417184	Y	NA	NA	BCL2L11,ACOXL	IMR90	Hi-C	24141950	MIR4435-1HG	166334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	112456456	112456792	112456629	Y	NA	NA	BCL2L11,ACOXL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANAPC1	183475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.286463987153593
chr2	112459778	112460151	112459873	Y	NA	NA	BCL2L11,ACOXL	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ANAPC1	180116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr2	112811776	112811937	112811878	Y	ZC3H6	TMEM87B	NA	NA	NA	NA	TMEM87B	976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr2	113292630	113292957	113292832	Y	IL1A	POLR1B,CHCHD5	NA	NA	NA	NA	POLR1B	4535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	113341105	113341247	113341152	Y	POLR1B	POLR1B,CHCHD5,AC079922.2	NA	NA	NA	NA	CHCHD5	1288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	113398370	113398650	113398523	Y	NA	AC079922.2,SLC20A1	NA	NA	NA	NA	SLC20A1	2784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	113448371	113448563	113448450	Y	IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A	SLC20A1,NT5DC4	SLC20A1,FLJ42351,POLR1B,CHCHD5,CKAP2L	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	NT5DC4	28500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	113448603	113448987	113448785	Y	IL36B,IL36G,IL1RN,IL1B,IL1A	SLC20A1,NT5DC4	POLR1B,CHCHD5,SLC20A1,CKAP2L,FLJ42351	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NT5DC4	28076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	113450039	113450435	113450231	Y	IL36B,IL36G,PSD4,IL1RN,IL1B,IL1A	SLC20A1,NT5DC4	SLC20A1,FLJ42351	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NT5DC4	26628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	113561817	113562080	113561958	Y	NA	CKAP2L	CKAP2L	IMR90	Hi-C	24141950	CKAP2L	41563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	113569466	113569945	113569683	Y	IL36B,IL36G,IL36RN,IL1RN,IL1A,IL1B	CKAP2L	NA	NA	NA	NA	CKAP2L	49212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr2	113576216	113576532	113576373	Y	IL36G,PSD4,IL1RN,IL1A,IL1B	NA	NA	NA	NA	NA	CKAP2L	55962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	113581693	113582026	113582010	Y	NA	NA	NA	NA	NA	NA	CKAP2L	61439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	113629155	113629320	113629193	Y	IL36B,IL36G,IL1RN,IL1A,IL1B	NA	IL1B,CKAP2L,IL1A	IMR90	Hi-C	24141950	CKAP2L	108901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	113916006	113916157	113916098	Y	IL1B,IL36G,IL36B,IL1RN	PSD4	IL1RN,LOC654433,PAX8,PSD4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PSD4	3104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	113924878	113925123	113925003	Y	IL1A,IL1B,IL36G,IL36B,IL1RN,CBWD2	PSD4	PSD4	K562	ChIA-PET	22265404	PSD4	11976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434707244303682
chr2	113969874	113970195	113970111	Y	NA	NA	NA	NA	NA	NA	PSD4	56972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	114046330	114046643	114046448	Y	NA	NA	PAX8,LOC654433	IMR90	Hi-C	24141950	PSD4	133428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.415805540099819
chr2	114082449	114082815	114082523	Y	NA	NA	PAX8,LOC654433	IMR90	Hi-C	24141950	PSD4	169547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr2	114457868	114458149	114458009	Y	ACTR3	MIR4782	NA	NA	NA	NA	MIR4782	18796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	114469366	114469830	114469722	Y	SLC35F5	MIR4782,SLC35F5	NA	NA	NA	NA	MIR4782	7115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.302897250772503
chr2	114634434	114634643	114634539	Y	NA	ACTR3	ACTR3	IMR90	Hi-C	24141950	ACTR3	10894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	114649026	114649412	114649076	Y	CBWD2,ACTR3	ACTR3	NA	NA	NA	NA	ACTR3	3489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr2	114652011	114652405	114652035	Y	CBWD2,ACTR3	ACTR3	NA	NA	NA	NA	ACTR3	6474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	114653014	114653311	114653090	Y	CBWD2,ACTR3	ACTR3	NA	NA	NA	NA	ACTR3	7477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	114672841	114673224	114672915	Y	NA	ACTR3	NA	NA	NA	NA	ACTR3	27304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	115177421	115177704	115177562	Y	NA	DPP10	NA	NA	NA	NA	DPP10	20172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	115897297	115897567	115897434	Y	DPP10,DPP10,DPP10	DPP10-AS1	NA	NA	NA	NA	DPP10-AS1	19353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	116027244	116027630	116027326	Y	NA	NA	NA	NA	NA	NA	DPP10-AS1	110324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	118739522	118739775	118739730	Y	DDX18,CCDC93	CCDC93	NA	NA	NA	NA	CCDC93	29934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr2	118741787	118742055	118741993	Y	CCDC93	CCDC93	NA	NA	NA	NA	CCDC93	27654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	118847045	118847263	118847087	Y	INSIG2	INSIG2	NA	NA	NA	NA	INSIG2	3017	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.42944151266717
chr2	120190413	120190812	120190613	Y	SCTR,PCDP1,TMEM37	TMEM37	NA	NA	NA	NA	TMEM37	4936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	120191442	120191798	120191569	Y	TMEM37	TMEM37	NA	NA	NA	NA	TMEM37	5965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr2	120192847	120193082	120192954	Y	TMEM37	TMEM37	NA	NA	NA	NA	TMEM37	7370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.329524472220747
chr2	120222602	120222796	120222714	Y	NA	TMEM37	NA	NA	NA	NA	TMEM37	37125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	120887789	120888032	120887910	Y	NA	NA	NA	NA	NA	NA	TMEM185B	90952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	120905923	120906046	120905986	Y	EPB41L5,EPB41L5	NA	NA	NA	NA	NA	TMEM185B	72938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr2	120971736	120972136	120971936	Y	NA	TMEM185B,RALB	NA	NA	NA	NA	TMEM185B	6848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	120996274	120996566	120996498	Y	NA	TMEM185B,RALB	EPB41L5,RALB,TMEM185B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RALB	634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.538575747221758
chr2	121156856	121157127	121156991	Y	INHBB	NA	INHBB,LOC84931	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	INHBB	55137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	121213613	121213629	121213621	Y	NA	NA	NA	NA	NA	NA	INHBB	111894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	121303695	121304155	121304026	Y	NA	NA	RALB,LOC84931,INHBB	IMR90	Hi-C	24141950	INHBB	201976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.665128664093508
chr2	121575399	121575754	121575577	Y	NA	NA	NA	NA	NA	NA	INHBB	473680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	121943239	121943562	121943401	Y	NA	NA	NA	NA	NA	NA	AC013399.3	122009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	122226715	122226882	122226860	Y	NA	NA	NA	NA	NA	NA	RNU4ATAC	59575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	122405703	122406017	122405860	Y	NA	CLASP1,NIFK-AS1	NA	NA	NA	NA	NIFK-AS1	477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	122456992	122457582	122457167	Y	CLASP1	TSN	NA	NA	NA	NA	TSN	35097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	122458148	122458329	122458303	Y	CLASP1	TSN	NA	NA	NA	NA	TSN	34350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	128090505	128090721	128090714	Y	NA	ERCC3	NA	NA	NA	NA	ERCC3	40753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	128143711	128144108	128144023	Y	SFT2D3,MAP3K2	PROC	CYP27C1,IWS1	IMR90	Hi-C	24141950	MAP3K2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	128165400	128165641	128165534	Y	NA	MAP3K2,PROC	NA	NA	NA	NA	PROC	8362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	128171512	128171657	128171580	Y	SFT2D3,IWS1,AMMECR1L,MAP3K2	MAP3K2,PROC	NA	NA	NA	NA	PROC	2346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	128258405	128258697	128258648	Y	NA	RNU4-48P,IWS1	NA	NA	NA	NA	IWS1	23765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	128283052	128283292	128283172	Y	MAP3K2,SFT2D3,AMMECR1L	IWS1	NA	NA	NA	NA	IWS1	590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	128469057	128469300	128469179	Y	NA	LIMS2,SFT2D3	NA	NA	NA	NA	SFT2D3	12460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	128470034	128470252	128470136	Y	NA	LIMS2,SFT2D3	NA	NA	NA	NA	SFT2D3	13437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	128562322	128562673	128562571	Y	NA	WDR33	LIMS2	IMR90	Hi-C	24141950	WDR33	4088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	128598749	128599093	128599053	Y	IWS1,SFT2D3,AMMECR1L	WDR33,POLR2D	NA	NA	NA	NA	POLR2D	14638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	128617356	128617514	128617464	Y	NA	POLR2D	NA	NA	NA	NA	POLR2D	3625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	128651321	128651407	128651347	Y	PROC,LIMS2,AMMECR1L	POLR2D	SAP130	IMR90	Hi-C	24141950	POLR2D	37590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.309308498852027
chr2	128773511	128773726	128773583	Y	NA	SAP130	NA	NA	NA	NA	SAP130	9968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	128927207	128927481	128927321	Y	NA	NA	NA	NA	NA	NA	UGGT1	80433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.819782657715921
chr2	129073927	129074235	129074112	Y	NA	NA	NA	NA	NA	NA	HS6ST1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	129074706	129075071	129074888	Y	NA	HS6ST1	NA	NA	NA	NA	HS6ST1	555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.454923217672401
chr2	129294867	129295138	129294889	Y	NA	NA	UGGT1,HS6ST1	IMR90	Hi-C	24141950	HS6ST1	220716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	129381655	129381863	129381711	Y	NA	NA	UGGT1,HS6ST1	IMR90	Hi-C	24141950	HS6ST1	307504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	131112712	131112965	131112906	Y	NA	IMP4,CCDC115	NA	NA	NA	NA	CCDC115	14790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	131148815	131149203	131148908	Y	FAM123C,FAM123C,FAM123C,CCDC115,PTPN18	NA	NA	NA	NA	NA	CCDC115	50893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	131149333	131149678	131149410	Y	FAM123C,FAM123C,FAM123C	NA	NA	NA	NA	NA	CCDC115	51411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.172733054833692
chr2	131555592	131555820	131555689	Y	CCDC115	ARHGEF4	PLEKHB2,FAM168B	K562,MCF7	ChIA-PET	22265404	ARHGEF4	36669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	131580723	131580994	131580902	Y	NA	ARHGEF4	ARHGEF4	IMR90	Hi-C	24141950	ARHGEF4	11495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	131828545	131828813	131828794	Y	NA	FAM168B,PLEKHB2	NA	NA	NA	NA	FAM168B	20220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	131863489	131864378	131863990	Y	PLEKHB2	FAM168B,PLEKHB2	NA	NA	NA	NA	PLEKHB2	3069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	132152335	132152426	132152381	Y	NA	NA	NA	NA	NA	NA	TUBA3D	79240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	133011418	133011623	133011538	Y	NA	NA	NA	NA	NA	NA	GPR39	160524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	134878523	134878632	134878609	Y	MGAT5	MGAT5	NA	NA	NA	NA	MGAT5	2969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	134878887	134879265	134878997	Y	NA	MGAT5	NA	NA	NA	NA	MGAT5	3333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	135062328	135062641	135062375	Y	NA	NA	NA	NA	NA	NA	MGAT5	186774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	135691118	135691392	135691265	Y	TMEM163,ACMSD,CCNT2	CCNT2,CCNT2-AS1	NA	NA	NA	NA	CCNT2-AS1	16838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	135701216	135701448	135701313	Y	NA	CCNT2,CCNT2-AS1	NA	NA	NA	NA	CCNT2-AS1	26936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr2	135931129	135931440	135931285	Y	NA	NA	NA	NA	NA	NA	RAB3GAP1	123294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	136242341	136242686	136242514	Y	NA	ZRANB3,R3HDM1	NA	NA	NA	NA	ZRANB3	44120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	136268329	136268541	136268430	Y	NA	ZRANB3,R3HDM1	NA	NA	NA	NA	ZRANB3	18265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr2	136504457	136504522	136504461	Y	NA	UBXN4	NA	NA	NA	NA	UBXN4	7268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	136632932	136633416	136633308	Y	UBXN4,CXCR4,CXCR4	MCM6	NA	NA	NA	NA	MCM6	936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr2	136887149	136887816	136887360	Y	UBXN4,CXCR4,CXCR4	CXCR4	CXCR4	K562	ChIA-PET	22265404	CXCR4	13414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	138765071	138765376	138765123	Y	NA	HNMT	NA	NA	NA	NA	HNMT	45481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr2	139112246	139112514	139112380	Y	NA	NA	NA	NA	NA	NA	AC097721.2	144754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	139226248	139226635	139226522	Y	NA	AC097721.2,SPOPL	NA	NA	NA	NA	AC097721.2	30633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	139260181	139260311	139260246	Y	SPOPL	AC097721.2,SPOPL	NA	NA	NA	NA	SPOPL	2810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr2	139342135	139342417	139342276	Y	NA	NA	NA	NA	NA	NA	SPOPL	84764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	140977991	140978216	140978106	Y	NA	NA	NA	NA	NA	NA	SPOPL	1720620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	143621913	143622291	143622202	Y	KYNU	KYNU	KYNU	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KYNU	10776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	143626907	143627542	143627416	Y	KYNU	KYNU	KYNU	MCF7	ChIA-PET	22265404	KYNU	5525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.702109429508648
chr2	143628214	143628759	143628425	Y	NA	KYNU	NA	NA	NA	NA	KYNU	4308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	143630782	143631707	143631171	Y	KYNU	KYNU	NA	NA	NA	NA	KYNU	1360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr2	143695947	143696225	143696015	Y	NA	NA	NA	NA	NA	NA	KYNU	62880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	143697269	143697638	143697450	Y	KYNU	NA	NA	NA	NA	NA	KYNU	64202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	143720663	143721004	143720729	Y	NA	NA	NA	NA	NA	NA	KYNU	87596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr2	143841282	143841488	143841338	Y	KYNU,ARHGAP15	NA	NA	NA	NA	NA	KYNU	208215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	143852347	143852525	143852358	Y	NA	NA	NA	NA	NA	NA	KYNU	219280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	144991861	144992184	144991938	Y	NA	NA	NA	NA	NA	NA	GTDC1	95951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	148640468	148640547	148640483	Y	NA	ACVR2A	NA	NA	NA	NA	ACVR2A	40382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	149267026	149267240	149267133	Y	EPC2	NA	NA	NA	NA	NA	EPC2	132769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr2	149403654	149404182	149403820	Y	NA	EPC2	NA	NA	NA	NA	EPC2	3645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	149416749	149416956	149416876	Y	NA	EPC2	NA	NA	NA	NA	EPC2	16740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	149634441	149634782	149634502	Y	KIF5C	KIF5C	NA	NA	NA	NA	KIF5C	3622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	149925246	149925613	149925433	Y	NA	NA	NA	NA	NA	NA	LYPD6	258886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	150222263	150222576	150222421	Y	NA	LYPD6	NA	NA	NA	NA	LYPD6	37764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.389018220906812
chr2	150440132	150440521	150440417	Y	NA	AC144449.1,MMADHC	NA	NA	NA	NA	AC144449.1	1189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	150470264	150470563	150470414	Y	NA	AC144449.1,MMADHC	RND3,RBM43	IMR90	Hi-C	24141950	MMADHC	27934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	152627978	152628361	152628290	Y	NA	NA	NA	NA	NA	NA	ARL5A	54645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	152700971	152701203	152701087	Y	FMNL2,CACNB4	ARL5A	NA	NA	NA	NA	ARL5A	17965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	152742904	152743255	152743079	Y	NA	NA	NA	NA	NA	NA	ARL5A	59898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	152757130	152757527	152757465	Y	CACNB4,CACNB4,CACNB4	NA	NA	NA	NA	NA	ARL5A	74124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	152789657	152790028	152790018	Y	FMNL2	NA	NA	NA	NA	NA	ARL5A	106651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr2	152971717	152971973	152971845	Y	NA	NA	NA	NA	NA	NA	STAM2	58533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	153057173	153057360	153057266	Y	FMNL2	STAM2	FMNL2	IMR90	Hi-C	24141950	STAM2	26667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	153261807	153262193	153261950	Y	NA	NA	NA	NA	NA	NA	FMNL2	72056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	153275296	153275683	153275311	Y	FMNL2	NA	NA	NA	NA	NA	FMNL2	85545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	153309848	153310421	153310088	Y	CACNB4,CACNB4,FMNL2,ARL6IP6	NA	NA	NA	NA	NA	FMNL2	120097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	153311931	153312064	153312029	Y	FMNL2	NA	NA	NA	NA	NA	FMNL2	122180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	153318771	153319092	153318943	Y	NA	NA	NA	NA	NA	NA	FMNL2	129020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	153347389	153347769	153347704	Y	NA	NA	NA	NA	NA	NA	FMNL2	157638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	153450651	153451105	153450977	Y	PRPF40A	NA	NA	NA	NA	NA	ARL6IP6	121302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	153568262	153568351	153568307	Y	NA	ARL6IP6,PRPF40A	NA	NA	NA	NA	ARL6IP6	4056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	154729073	154729474	154729153	Y	NA	GALNT13	NA	NA	NA	NA	GALNT13	2647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	156832393	156832495	156832444	Y	NA	NA	NA	NA	NA	NA	NR4A2	364365	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	156949297	156949674	156949418	Y	NA	NA	NA	NA	NA	NA	NR4A2	247186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	157038752	157038990	157038871	Y	NR4A2	NA	NR4A2	MCF7	ChIA-PET	22265404	NR4A2	157870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	157190328	157191531	157191235	Y	GPD2,NR4A2	NR4A2	GPD2	IMR90	Hi-C	24141950	NR4A2	5329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	157191997	157192231	157192220	Y	GPD2,NR4A2	NR4A2	GPD2	IMR90	Hi-C	24141950	NR4A2	4629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	157659765	157659881	157659802	Y	NA	NA	NA	NA	NA	NA	NR4A2	462905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	158067838	158068005	158067865	Y	NA	NA	NA	NA	NA	NA	ERMN	114220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	159749466	159749905	159749830	Y	NA	NA	LY75-CD302,TANC1,WDSUB1,BAZ2B	IMR90	Hi-C	24141950	TANC1	73241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	159855059	159855514	159855150	Y	NA	TANC1	NA	NA	NA	NA	TANC1	31913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	159996824	159997456	159997123	Y	NA	NA	NA	NA	NA	NA	WDSUB1	143854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	160095412	160095531	160095474	Y	NA	WDSUB1	NA	NA	NA	NA	WDSUB1	45779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	160106082	160106269	160106215	Y	MARCH7	WDSUB1	NA	NA	NA	NA	WDSUB1	35041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	160411225	160411529	160411489	Y	NA	NA	NA	NA	NA	NA	AC009506.1	58278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	160470388	160470776	160470715	Y	NA	AC009506.1,BAZ2B	NA	NA	NA	NA	BAZ2B	427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	161064664	161064880	161064794	Y	NA	NA	ITGB6,RBMS1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MIR4785	197513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	161080666	161080905	161080769	Y	NA	NA	ITGB6,RBMS1,TANK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MIR4785	181488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	161155946	161156394	161156280	Y	NA	NA	NA	NA	NA	NA	MIR4785	105999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	161173742	161174088	161173899	Y	NA	NA	NA	NA	NA	NA	MIR4785	88305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	161277229	161277590	161277411	Y	NA	MIR4785	NA	NA	NA	NA	MIR4785	14836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	161348201	161348679	161348535	Y	RBMS1	NA	NA	NA	NA	NA	RBMS1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr2	161951172	161951432	161951220	Y	NA	TANK	TANK,ITGB6,RBMS1	IMR90	Hi-C	24141950	TANK	39987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	161979819	161979978	161979936	Y	TANK,TANK	TANK	PLA2R1,RBMS1,LY75-CD302,TANK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TANK	11441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	161991888	161992259	161991958	Y	NA	TANK	NA	NA	NA	NA	TANK	469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	162095171	162095411	162095272	Y	TBR1,SLC4A10	AC009299.3	NA	NA	NA	NA	AC009299.3	3839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	162197345	162197490	162197464	Y	NA	PSMD14,AC009299.5	NA	NA	NA	NA	AC009299.5	1508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr2	163176169	163176652	163176261	Y	NA	IFIH1,GCA	NA	NA	NA	NA	GCA	2819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	164486140	164486494	164486462	Y	NA	NA	NA	NA	NA	NA	FIGN	104028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	164553215	164553632	164553445	Y	NA	FIGN	NA	NA	NA	NA	FIGN	36890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	164563373	164563497	164563435	Y	FIGN	FIGN	NA	NA	NA	NA	FIGN	27025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	164991272	164991524	164991400	Y	FIGN	NA	NA	NA	NA	NA	FIGN	400750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	165371083	165371396	165371192	Y	NA	NA	NA	NA	NA	NA	GRB14	104962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr2	165430240	165430431	165430256	Y	NA	GRB14	NA	NA	NA	NA	GRB14	45927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	165508598	165508853	165508726	Y	COBLL1	GRB14	GRB14	MCF7	ChIA-PET	22265404	GRB14	32240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	165640958	165641192	165641060	Y	NA	NA	NA	NA	NA	NA	AC019181.2	54067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	165643142	165643316	165643229	Y	NA	NA	NA	NA	NA	NA	AC019181.2	51943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	165683192	165683287	165683237	Y	NA	AC019181.2,COBLL1	NA	NA	NA	NA	AC019181.2	11972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr2	165727413	165727426	165727420	Y	NA	AC019181.2,COBLL1	COBLL1	MCF7	ChIA-PET	22265404	COBLL1	29224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	165777057	165777208	165777083	Y	NA	NA	NA	NA	NA	NA	COBLL1	78868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	165801450	165801783	165801617	Y	SLC38A11	NA	NA	NA	NA	NA	COBLL1	103261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	166671246	166671486	166671366	Y	CSRNP3	GALNT3	NA	NA	NA	NA	GALNT3	22054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	166705742	166705996	166705870	Y	NA	NA	NA	NA	NA	NA	GALNT3	56550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	166734901	166734996	166734949	Y	NA	NA	NA	NA	NA	NA	TTC21B	73357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	166778122	166778316	166778220	Y	NA	TTC21B	NA	NA	NA	NA	TTC21B	30037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	166796102	166796135	166796119	Y	NA	TTC21B	NA	NA	NA	NA	TTC21B	12218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr2	166890650	166891004	166890893	Y	TTC21B,SCN1A	NA	NA	NA	NA	NA	TTC21B	82297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	166983519	166983786	166983732	Y	NA	SCN1A	NA	NA	NA	NA	SCN1A	996	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.00796623543118
chr2	167070669	167070978	167070814	Y	NA	NA	NA	NA	NA	NA	SCN1A	88146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	168822360	168822564	168822456	Y	NA	NA	NA	NA	NA	NA	STK39	280087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	168858571	168859104	168858832	Y	NA	NA	NA	NA	NA	NA	STK39	243547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	168911148	168911462	168911308	Y	NA	NA	NA	NA	NA	NA	STK39	191189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	168994093	168994243	168994234	Y	NA	NA	NA	NA	NA	NA	STK39	108408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	169347640	169347834	169347737	Y	NA	CERS6	NA	NA	NA	NA	CERS6	37268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	169409032	169409398	169409117	Y	NA	NA	NA	NA	NA	NA	CERS6	98660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	169434382	169434732	169434541	Y	NA	NA	NA	NA	NA	NA	CERS6	124010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	170441657	170442069	170441908	Y	NA	FASTKD1,PPIG	NA	NA	NA	NA	PPIG	2807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	170573146	170573520	170573335	Y	NA	PHOSPHO2,KLHL23	NA	NA	NA	NA	KLHL23	24148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr2	170684911	170685465	170685124	Y	PPIG,C2orf77,PHOSPHO2,UBR3	SSB,METTL5,UBR3	NA	NA	NA	NA	UBR3	2943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	171786835	171787228	171786978	Y	TLK1	GORASP2	NA	NA	NA	NA	GORASP2	3861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	171830049	171830396	171830113	Y	NA	GORASP2	NA	NA	NA	NA	GORASP2	47075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.480727284520862
chr2	171977769	171978174	171977980	Y	NA	NA	NA	NA	NA	NA	TLK1	107650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	171997679	171997950	171997833	Y	NA	NA	NA	NA	NA	NA	TLK1	87874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	172287168	172287529	172287349	Y	TLK1	DCAF17,METTL8	NA	NA	NA	NA	DCAF17	1198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	172792873	172793084	172792979	Y	NA	HAT1	NA	NA	NA	NA	HAT1	15915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	172957811	172957994	172957904	Y	DYNC1I2,DLX1,DLX2	DLX1,DLX2	NA	NA	NA	NA	DLX2	7634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	173064305	173064723	173064396	Y	NA	NA	ITGA6	IMR90	Hi-C	24141950	DLX2	98677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	173111540	173111762	173111691	Y	ITGA6	NA	ITGA6	IMR90	Hi-C	24141950	DLX2	145912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	173117910	173118399	173118084	Y	NA	NA	ITGA6	IMR90	Hi-C	24141950	DLX2	152282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	173302497	173302807	173302540	Y	NA	ITGA6	NA	NA	NA	NA	ITGA6	12415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	173306862	173307108	173306983	Y	NA	ITGA6	NA	NA	NA	NA	ITGA6	16780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	173941754	173942308	173942062	Y	ZAK	NA	NA	NA	NA	NA	CDCA7	275240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	174007383	174007707	174007544	Y	ZAK	NA	NA	NA	NA	NA	CDCA7	209841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	174046612	174047013	174046770	Y	NA	NA	NA	NA	NA	NA	CDCA7	170535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	174776201	174776462	174776332	Y	NA	NA	NA	NA	NA	NA	SP3	51968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	174800246	174800560	174800554	Y	NA	SP3	NA	NA	NA	NA	SP3	27870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	174888201	174889400	174889077	Y	SP3,SP3	NA	SP3,OLA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SP3	59771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	174889919	174890381	174890067	Y	NA	NA	SP3,OLA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SP3	61489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	174900688	174901381	174900887	Y	SP3,SP3	NA	SP3,CDCA7,OLA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SP3	72258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	174963658	174963852	174963755	Y	NA	NA	NA	NA	NA	NA	SP3	135228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	175036157	175036485	175036321	Y	NA	NA	NA	NA	NA	NA	OLA1	74941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	175085975	175086128	175086062	Y	NA	OLA1	NA	NA	NA	NA	OLA1	25298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	175248509	175248787	175248661	Y	SP3,SP3	CIR1,SCRN3	NA	NA	NA	NA	CIR1	9656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	175708423	175708587	175708507	Y	NA	NA	NA	NA	NA	NA	H3F3AP4	125918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	175762241	175762347	175762322	Y	NA	NA	NA	NA	NA	NA	H3F3AP4	179736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	176210828	176210945	176210887	Y	NA	NA	NA	NA	NA	NA	ATP5G3	163493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	176495464	176495481	176495473	Y	NA	NA	EVX2,HOXD13	IMR90	Hi-C	24141950	KIAA1715	370086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	176608884	176609040	176608962	Y	NA	NA	NA	NA	NA	NA	KIAA1715	256527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	176866139	176866392	176866261	Y	KIAA1715	KIAA1715	NA	NA	NA	NA	KIAA1715	572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr2	177047108	177047317	177047213	Y	NA	HOXD1,HOXD-AS1,AC016739.2	NA	NA	NA	NA	HOXD1	3990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	177344827	177345046	177344942	Y	HOXD4	NA	HOXD-AS2,MTX2,HOXD8,HOXD-AS1,HOXD1	IMR90	Hi-C	24141950	MTX2	212704	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	178030872	178031290	178031011	Y	NFE2L2,NFE2L2	HNRNPA3,AC079305.8	HOXD-AS2,LOC100130691,AGPS,PDE11A,NFE2L2,HNRNPA3,TTC30A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	HNRNPA3	44001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	178100990	178101571	178101482	Y	NA	HNRNPA3,AC079305.8,MIR3128	NA	NA	NA	NA	MIR3128	17167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	178104644	178105169	178104872	Y	NFE2L2,NFE2L2,HNRNPA3	HNRNPA3,AC079305.8,MIR3128	NA	NA	NA	NA	MIR3128	13569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.679264917810214
chr2	178116726	178117036	178116927	Y	NFE2L2,NFE2L2,HNRNPA3	HNRNPA3,AC079305.8,MIR3128	NA	NA	NA	NA	MIR3128	1702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr2	178131060	178131559	178131324	Y	NA	MIR3128	NA	NA	NA	NA	MIR3128	12322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	178260156	178260330	178260230	Y	NFE2L2	AGPS,AC074286.1,NFE2L2	NA	NA	NA	NA	NFE2L2	4731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	178261376	178261686	178261570	Y	NA	AGPS,AC074286.1,NFE2L2	NA	NA	NA	NA	NFE2L2	5951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	179487942	179488336	179488251	Y	NA	NA	NA	NA	NA	NA	TTN-AS1	104032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	180044911	180045098	180045020	Y	SESTD1	NA	NA	NA	NA	NA	SESTD1	82419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	180098781	180098979	180098880	Y	NA	SESTD1	NA	NA	NA	NA	SESTD1	28538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	180116495	180116858	180116779	Y	SESTD1	SESTD1	NA	NA	NA	NA	SESTD1	10659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	180123713	180123938	180123827	Y	NA	SESTD1	NA	NA	NA	NA	SESTD1	3579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	180127574	180128171	180127755	Y	NA	SESTD1	NA	NA	NA	NA	SESTD1	57	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	180325251	180325377	180325327	Y	NA	NA	NA	NA	NA	NA	SESTD1	197734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	180625658	180625928	180625899	Y	ZNF385B	NA	NA	NA	NA	NA	CWC22	243912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	180871045	180871158	180871103	Y	NA	CWC22	NA	NA	NA	NA	CWC22	1205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	182655515	182655597	182655556	Y	NA	NA	SSFA2,PPP1R1C	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	SSFA2	98963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	182675600	182675877	182675735	Y	SSFA2	NA	SSFA2	IMR90	Hi-C	24141950	SSFA2	78683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	183626884	183626903	183626894	Y	NA	DNAJC10	NA	NA	NA	NA	DNAJC10	47885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	183839050	183839414	183839395	Y	NA	NA	NA	NA	NA	NA	NCKAP1	62172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	183877830	183878146	183878099	Y	NA	NCKAP1	NA	NA	NA	NA	NCKAP1	23440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	186616540	186616923	186616825	Y	NA	FSIP2	NA	NA	NA	NA	FSIP2	15185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	186638782	186639016	186638929	Y	NA	FSIP2	NA	NA	NA	NA	FSIP2	37427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	186645587	186645801	186645694	Y	NA	FSIP2	NA	NA	NA	NA	FSIP2	44232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	186785756	186786079	186786020	Y	NA	NA	NA	NA	NA	NA	FSIP2	184401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	186832070	186832214	186832142	Y	NA	NA	NA	NA	NA	NA	FSIP2	230715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	187015061	187015446	187015349	Y	NA	NA	NA	NA	NA	NA	ZC3H15	333437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr2	187194208	187194220	187194214	Y	NA	NA	NA	NA	NA	NA	ZC3H15	154663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	187263813	187264095	187263899	Y	NA	NA	NA	NA	NA	NA	ZC3H15	84788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr2	187318926	187319192	187319071	Y	NA	ZC3H15	NA	NA	NA	NA	ZC3H15	29691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr2	187390995	187391341	187391159	Y	NA	ZC3H15	NA	NA	NA	NA	ZC3H15	42112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	187409105	187409391	187409239	Y	ITGAV,ITGAV	ITGAV	ITGAV	MCF7	ChIA-PET	22265404	ITGAV	43401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	188326523	188326725	188326579	Y	NA	NA	NA	NA	NA	NA	TFPI	101762	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.30732302946227
chr2	188340607	188340894	188340852	Y	NA	NA	NA	NA	NA	NA	TFPI	87593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	188347584	188347786	188347681	Y	NA	NA	NA	NA	NA	NA	TFPI	80701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	188389811	188390126	188390006	Y	NA	TFPI	NA	NA	NA	NA	TFPI	38361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr2	188404228	188404596	188404560	Y	TFPI	TFPI	NA	NA	NA	NA	TFPI	23891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr2	188414787	188415077	188415012	Y	NA	TFPI	NA	NA	NA	NA	TFPI	13410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.513102697193609
chr2	188463858	188463880	188463868	Y	TFPI	TFPI	GULP1	IMR90	Hi-C	24141950	TFPI	35371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	188464486	188464724	188464607	Y	NA	TFPI	GULP1	IMR90	Hi-C	24141950	TFPI	35999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	190272344	190272674	190272405	Y	NA	WDR75	COL5A2,GULP1,COL3A1,MIR1245B,WDR75,DIRC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	WDR75	31485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	190308827	190308942	190308831	Y	NA	WDR75	NA	NA	NA	NA	WDR75	4668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	190477917	190478080	190477982	Y	NA	SLC40A1,ASNSD1	SLC40A1,WDR75,ASNSD1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	SLC40A1	31433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	190729809	190730106	190729887	Y	OSGEPL1,PMS1	C2orf88	NA	NA	NA	NA	C2orf88	12229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	190739432	190739578	190739518	Y	NA	C2orf88	NA	NA	NA	NA	C2orf88	2757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr2	190741113	190741271	190741187	Y	NA	C2orf88	NA	NA	NA	NA	C2orf88	1064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	191075616	191075973	191075872	Y	NA	NA	NA	NA	NA	NA	INPP1	130223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276110443186696
chr2	191104181	191104357	191104269	Y	NA	NA	NA	NA	NA	NA	INPP1	101839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	191217459	191217900	191217739	Y	NA	INPP1,HIBCH	NA	NA	NA	NA	HIBCH	10540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	191659220	191659442	191659369	Y	GLS	NA	STAT1,MFSD6,GLS,NAB1	IMR90	Hi-C	24141950	GLS	84111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	191660541	191660565	191660553	Y	NA	NA	STAT1,MFSD6,GLS,NAB1	IMR90	Hi-C	24141950	GLS	82988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr2	191708638	191708846	191708778	Y	STAT4,NAB1,STAT1,GLS	GLS,AC005540.3	GLS,STAT1,NAB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GLS	34707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	191711355	191711777	191711579	Y	GLS	GLS,AC005540.3	GLS,STAT1,NAB1	IMR90	Hi-C	24141950	GLS	31776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	191815156	191815612	191815322	Y	GLS	AC067945.3	NA	NA	NA	NA	AC067945.3	40681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	191825811	191826187	191826065	Y	NAB1,GLS,STAT1	AC067945.3	NA	NA	NA	NA	AC067945.3	30106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	191984586	191984681	191984634	Y	NA	NA	NA	NA	NA	NA	STAT1	100900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	192082382	192082563	192082473	Y	MYO1B,MYO1B	MYO1B	MYO1B,STAT4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MYO1B	25348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	192084344	192084437	192084391	Y	NA	MYO1B	MYO1B,STAT4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MYO1B	23474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	192112527	192112680	192112632	Y	NA	MYO1B	NA	NA	NA	NA	MYO1B	4616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr2	192123995	192124097	192124046	Y	NA	MYO1B	NA	NA	NA	NA	MYO1B	16084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	192170125	192170408	192170266	Y	NA	NA	NA	NA	NA	NA	MYO1B	62214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	192489815	192490209	192490062	Y	STAT4,OBFC2A	NA	OBFC2A	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	AC098617.1	219056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	192500525	192500897	192500643	Y	NA	NA	OBFC2A	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	AC098617.1	208368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr2	192503383	192503649	192503532	Y	OBFC2A	NA	OBFC2A	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	AC098617.1	205616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	192707967	192708344	192708338	Y	NA	AC098617.1,SDPR	NA	NA	NA	NA	AC098617.1	921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	192709927	192710444	192710339	Y	SDPR	AC098617.1	NA	NA	NA	NA	SDPR	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	192714242	192714365	192714337	Y	SDPR	AC098617.1,SDPR	NA	NA	NA	NA	SDPR	4261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	192717272	192717408	192717316	Y	NA	AC098617.1,SDPR	NA	NA	NA	NA	SDPR	7291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr2	192839658	192840009	192839864	Y	TMEFF2	NA	NA	NA	NA	NA	SDPR	129677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	192870555	192870805	192870799	Y	NA	NA	NA	NA	NA	NA	SDPR	160574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr2	192889960	192890123	192890039	Y	NA	NA	NA	NA	NA	NA	SDPR	179979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	192893540	192893930	192893543	Y	TMEFF2	NA	NA	NA	NA	NA	SDPR	183559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	192915570	192915970	192915770	Y	NA	NA	NA	NA	NA	NA	SDPR	205589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr2	196478695	196478993	196478847	Y	NA	SLC39A10	SLC39A10	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC39A10	39994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	196531201	196531576	196531334	Y	NA	NA	NA	NA	NA	NA	SLC39A10	92500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	197623019	197623245	197623231	Y	NA	GTF3C3	NA	NA	NA	NA	GTF3C3	39204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	197787148	197787421	197787192	Y	NA	PGAP1	NA	NA	NA	NA	PGAP1	3099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	197934286	197934620	197934500	Y	NA	NA	NA	NA	NA	NA	PGAP1	143766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr2	198024213	198024664	198024538	Y	SF3B1,COQ10B	NA	NA	NA	NA	NA	ATP5G2P3	101171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	198112714	198113044	198112879	Y	NA	ATP5G2P3	NA	NA	NA	NA	ATP5G2P3	12791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	198350765	198350931	198350852	Y	NA	COQ10B,HSPE1,MOB4,HSPD1	NA	NA	NA	NA	HSPE1	11787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr2	198702876	198702992	198702942	Y	NA	PLCL1	NA	NA	NA	NA	PLCL1	35450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	198779993	198780262	198780022	Y	NA	NA	NA	NA	NA	NA	PLCL1	112567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	200209653	200209909	200209897	Y	SATB2,SATB2,SATB2	NA	NA	NA	NA	NA	SATB2-AS1	110514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	200270966	200271332	200271300	Y	NA	SATB2-AS1	NA	NA	NA	NA	SATB2-AS1	49091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	200328214	200328741	200328463	Y	SATB2,SATB2,SATB2	SATB2-AS1,SATB2	NA	NA	NA	NA	SATB2	5248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	200328743	200328999	200328976	Y	SATB2,SATB2,SATB2	SATB2-AS1,SATB2	NA	NA	NA	NA	SATB2	4990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	200800298	200800427	200800328	Y	SATB2,SATB2,SATB2,TYW5,C2orf69	AC073043.1,C2orf69,C2orf47,TYW5	NA	NA	NA	NA	C2orf47	17613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	201167757	201168004	201167857	Y	SPATS2L,SPATS2L	SPATS2L	NA	NA	NA	NA	SPATS2L	600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.656912032284053
chr2	201172384	201172536	201172446	Y	NA	SPATS2L	NA	NA	NA	NA	SPATS2L	3780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	201268506	201268867	201268734	Y	CLK1,CLK1,BZW1,BZW1,BZW1	NA	NA	NA	NA	NA	SPATS2L	99902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	201270357	201270484	201270442	Y	CLK1,CLK1,BZW1,BZW1,BZW1	NA	NA	NA	NA	NA	SPATS2L	101753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	201273148	201273356	201273255	Y	CLK1,CLK1,BZW1,BZW1,BZW1	NA	NA	NA	NA	NA	SGOL2	99375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	201289842	201289940	201289893	Y	NA	NA	NA	NA	NA	NA	SGOL2	82791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	201397001	201397079	201397012	Y	NA	SGOL2,KCTD18	NA	NA	NA	NA	KCTD18	14494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	201411222	201411458	201411252	Y	PPIL3,NIF3L1,NIF3L1,SGOL2	SGOL2,KCTD18,AOX1	NA	NA	NA	NA	KCTD18	28715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr2	201777095	201777270	201777183	Y	FAM126B,CFLAR,CFLAR	CLK1,PPIL3,NIF3L1,AC005037.3,ORC2	NA	NA	NA	NA	NIF3L1	25045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	201794314	201794594	201794537	Y	BZW1,BZW1,BZW1,CASP10,CLK1,CLK1	PPIL3,NIF3L1,AC005037.3,ORC2	NA	NA	NA	NA	AC005037.3	31392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	201829288	201829721	201829590	Y	KCTD18,FAM126B,CFLAR,CFLAR,CFLAR,CASP8,CASP8,CLK1,CLK1,NIF3L1,NIF3L1,ORC2	AC005037.3,ORC2	NA	NA	NA	NA	ORC2	2885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	201830040	201830326	201830203	Y	KCTD18,FAM126B,CASP8,CLK1,CLK1	AC005037.3,ORC2	NA	NA	NA	NA	ORC2	3637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	201922447	201922672	201922559	Y	NA	NDUFB3,FAM126B,AC007272.3	ORC2	IMR90	Hi-C	24141950	NDUFB3	11484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	201978583	201978718	201978642	Y	CLK1,CLK1,TRAK2,STRADB,CFLAR,CFLAR,CFLAR,CASP8,FAM126B,CFLAR	NDUFB3,FAM126B,AC007272.3,CFLAR	NA	NA	NA	NA	CFLAR	109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	201989489	201990098	201989672	Y	BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	AC007272.3,CFLAR	NA	NA	NA	NA	CFLAR	10662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr2	201990242	201990732	201990460	Y	BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	AC007272.3,CFLAR	NA	NA	NA	NA	CFLAR	11415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	201995421	201995893	201995513	Y	BZW1,BZW1,BZW1,CLK1,CLK1,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	AC007272.3,CFLAR,CASP10	NA	NA	NA	NA	CFLAR	16594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	202078581	202078959	202078777	Y	CASP10	CASP10,CASP8	NA	NA	NA	NA	CASP8	17207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	202079360	202079680	202079556	Y	CLK1,CLK1,CFLAR,CASP10	CASP10,CASP8	NA	NA	NA	NA	CASP8	16486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr2	202100663	202100910	202100770	Y	NA	CASP8	NA	NA	NA	NA	CASP8	4497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	202102159	202102434	202102342	Y	NA	CASP8	NA	NA	NA	NA	CASP8	5993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	202104378	202104489	202104432	Y	BZW1,BZW1,BZW1,CLK1,CLK1,FAM126B,CFLAR,CASP8,CFLAR,CFLAR,CFLAR,CASP10	CASP8	NA	NA	NA	NA	CASP8	8212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	202109391	202109622	202109507	Y	NA	CASP8	NA	NA	NA	NA	CASP8	13225	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	202127532	202127774	202127615	Y	CLK1,CLK1,FAM126B,CFLAR,CFLAR,CFLAR,CASP8,CASP8,CASP8	CASP8	NA	NA	NA	NA	CASP8	31366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	202898182	202898685	202898353	Y	TMEM237,FZD7	NA	NA	NA	NA	NA	PSMA2P3	143335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.412685375597831
chr2	203090268	203090335	203090273	Y	NA	PSMA2P3,DAZAP2P1,SUMO1,NOP58	NA	NA	NA	NA	SUMO1	10996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	203131534	203131826	203131673	Y	FAM117B,NOP58	SUMO1,NOP58	NA	NA	NA	NA	NOP58	3095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	203159775	203160145	203159798	Y	NA	NOP58	NA	NA	NA	NA	NOP58	31336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	203231501	203231745	203231624	Y	NA	BMPR2	BMPR2,NOP58	IMR90	Hi-C	24141950	BMPR2	7914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	203239784	203239912	203239798	Y	NA	BMPR2	NA	NA	NA	NA	BMPR2	125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr2	203341668	203341778	203341723	Y	NA	NA	NA	NA	NA	NA	BMPR2	102009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	203652717	203652999	203652954	Y	ICA1L,ICA1L,CYP20A1	NA	NA	NA	NA	NA	KRT8P15	51505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	204311629	204311925	204311741	Y	NBEAL1,CYP20A1,ABI2	NA	NA	NA	NA	NA	RAPH1	86208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	204499475	204499823	204499577	Y	NA	NA	ABI2,RAPH1	IMR90	Hi-C	24141950	RAPH1	101342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	204548440	204549024	204548878	Y	NA	NA	RAPH1,CD28	IMR90	Hi-C	24141950	RAPH1	150307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	204646981	204647288	204647136	Y	NA	NA	CD28,RAPH1,ABI2,CYP20A1	IMR90	Hi-C	24141950	RAPH1	248848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	204672477	204672504	204672490	Y	NA	NA	RAPH1,CD28,NBEAL1,CYP20A1	IMR90	Hi-C	24141950	RAPH1	274344	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	204676480	204676691	204676598	Y	NA	NA	RAPH1,CD28,NBEAL1,CYP20A1	IMR90	Hi-C	24141950	RAPH1	278347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	204680113	204680267	204680190	Y	NA	NA	RAPH1,NBEAL1,CYP20A1,ABI2	IMR90	Hi-C	24141950	RAPH1	281980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	206439575	206439768	206439663	Y	NA	NA	NA	NA	NA	NA	NRP2	104946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	206935678	206936046	206935862	Y	NA	AC007383.3,INO80D	NA	NA	NA	NA	AC007383.3	11283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	206944485	206944991	206944704	Y	NA	AC007383.3,INO80D	NA	NA	NA	NA	AC007383.3	2338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	206948392	206948813	206948647	Y	NA	AC007383.3,INO80D	NA	NA	NA	NA	INO80D	214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr2	207981292	207981447	207981370	Y	NA	KLF7	NA	NA	NA	NA	KLF7	48544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	208016492	208017045	208016857	Y	CREB1	KLF7	NA	NA	NA	NA	KLF7	12946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	208027980	208028625	208028335	Y	CREB1,KLF7	KLF7	NA	NA	NA	NA	KLF7	1366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr2	208028732	208029438	208029179	Y	METTL21A,CREB1,KLF7	KLF7	NA	NA	NA	NA	KLF7	553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	208198821	208199856	208199157	Y	KLF7	NA	KLF7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF7	168830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	208368128	208368502	208368141	Y	CREB1	CREB1	KLF7,CREB1,METTL21A,CCNYL1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CREB1	23959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	208395422	208395980	208395659	Y	PLEKHM3,METTL21A,METTL21A,CREB1	CREB1	NA	NA	NA	NA	CREB1	2961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr2	208602415	208602802	208602609	Y	NA	CCNYL1,FZD5	NA	NA	NA	NA	CCNYL1	28151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	208609048	208609450	208609191	Y	NA	CCNYL1,FZD5	NA	NA	NA	NA	FZD5	22837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr2	208622865	208623146	208623006	Y	NA	CCNYL1,FZD5	NA	NA	NA	NA	FZD5	9141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	208656928	208657357	208657034	Y	FZD5	FZD5	PLEKHM3,CCNYL1,FZD5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FZD5	24641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.610891480459672
chr2	208749045	208749238	208749090	Y	NA	AC083900.1	NA	NA	NA	NA	AC083900.1	16406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	208791202	208791275	208791238	Y	NA	NA	NA	NA	NA	NA	AC083900.1	58563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	208883092	208883191	208883110	Y	PTH2R,C2orf80	PLEKHM3	NA	NA	NA	NA	PLEKHM3	5093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	210872654	210873081	210872784	Y	C2orf67	RPE	NA	NA	NA	NA	RPE	7365	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	210937153	210937376	210937265	Y	NA	NA	NA	NA	NA	NA	RPE	71864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	211404935	211405006	211404955	Y	CPS1	NA	NA	NA	NA	NA	CPS1	64529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr2	211406237	211406446	211406310	Y	NA	NA	NA	NA	NA	NA	CPS1	65831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr2	211413660	211414008	211413843	Y	ACADL,CPS1,CPS1	NA	NA	NA	NA	NA	CPS1	73254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.357134434406338
chr2	212368666	212368999	212368856	Y	NA	NA	NA	NA	NA	NA	AC013404.1	206752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	213168681	213168967	213168824	Y	NA	NA	NA	NA	NA	NA	SPAG16	978146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	214053041	214053239	214053088	Y	NA	NA	NA	NA	NA	NA	SPAG16	93874	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	216158816	216158951	216158871	Y	NA	ATIC	ATIC,ABCA12	MCF7	ChIA-PET	22265404	ATIC	15589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	216216233	216216482	216216439	Y	NA	ATIC	NA	NA	NA	NA	ATIC	41693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	216222058	216222324	216222191	Y	FN1	ATIC	NA	NA	NA	NA	ATIC	47518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	216222811	216223009	216222866	Y	NA	ATIC	NA	NA	NA	NA	ATIC	48271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	216290729	216290756	216290730	Y	FN1	FN1,AC012462.1	NA	NA	NA	NA	FN1	8139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr2	216291390	216291532	216291529	Y	FN1	FN1,AC012462.1	NA	NA	NA	NA	FN1	7363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	216483720	216484034	216483877	Y	NA	NA	NA	NA	NA	NA	AC012462.1	184744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr2	216489283	216489494	216489351	Y	FN1	NA	NA	NA	NA	NA	AC012462.1	190307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.636204432743059
chr2	216529638	216529897	216529693	Y	NA	NA	NA	NA	NA	NA	AC012462.1	230662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	216557446	216557685	216557585	Y	NA	NA	NA	NA	NA	NA	AC012462.1	258470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr2	216558345	216558652	216558547	Y	NA	NA	NA	NA	NA	NA	AC012462.1	259369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.766860254854143
chr2	216565353	216565449	216565419	Y	NA	NA	NA	NA	NA	NA	AC012462.1	266377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	216576202	216576464	216576327	Y	NA	NA	NA	NA	NA	NA	AC012462.1	277226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	216614389	216614747	216614614	Y	NA	NA	NA	NA	NA	NA	MREG	282072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	216695142	216695306	216695226	Y	NA	NA	NA	NA	NA	NA	MREG	201513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr2	216698635	216698894	216698754	Y	NA	NA	NA	NA	NA	NA	MREG	197925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.83819324735471
chr2	216847055	216847597	216847305	Y	NA	MREG	NA	NA	NA	NA	MREG	49222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	216865894	216866240	216866102	Y	TMEM169,PECR,MREG	MREG	NA	NA	NA	NA	MREG	30579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr2	216867934	216868318	216868147	Y	TMEM169	MREG	NA	NA	NA	NA	MREG	28501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	216869710	216869915	216869809	Y	MREG	MREG	NA	NA	NA	NA	MREG	26904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	216870818	216871425	216871006	Y	NA	MREG	NA	NA	NA	NA	MREG	25394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	216876845	216877231	216877087	Y	MREG	MREG	NA	NA	NA	NA	MREG	19588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	216948718	216948931	216948849	Y	NA	TMEM169,PECR,XRCC5	NA	NA	NA	NA	PECR	3040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr2	217312390	217312696	217312543	Y	NA	SMARCAL1,RPL37A,AC098820.3	NA	NA	NA	NA	SMARCAL1	37253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	218698867	218699220	218699042	Y	PNKD	NA	NA	NA	NA	NA	TNS1	166498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	218764264	218764471	218764407	Y	TMBIM1,SLC11A1,PNKD,ARPC2,ARPC2	NA	NA	NA	NA	NA	TNS1	101247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	218767248	218767888	218767577	Y	TMBIM1,SLC11A1,PNKD,ARPC2,ARPC2	NA	NA	NA	NA	NA	TNS1	97830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr2	219188663	219189129	219189071	Y	ARPC2,ARPC2,TTLL4,CYP27A1,TMBIM1,PNKD,SLC11A1	TMBIM1,AC021016.7	NA	NA	NA	NA	AC021016.7	27669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	219270976	219271406	219271230	Y	CXCR2,CXCR2,CXCR1,ZNF142,USP37,TTLL4,SLC11A1	CTDSP1,VIL1	NA	NA	NA	NA	CTDSP1	9997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.537261478056901
chr2	219271996	219272374	219272308	Y	USP37	CTDSP1,VIL1	NA	NA	NA	NA	VIL1	9441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr2	219434664	219435146	219434778	Y	USP37	USP37,RQCD1	NA	NA	NA	NA	RQCD1	3361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr2	219596297	219596622	219596516	Y	TMBIM1,PNKD,SLC11A1,USP37,TTLL4,CYP27A1	TTLL4,CYP27A1	NA	NA	NA	NA	TTLL4	22729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr2	219598381	219598949	219598614	Y	TMBIM1,PNKD,SLC11A1,USP37,CYP27A1	TTLL4,CYP27A1	NA	NA	NA	NA	TTLL4	24813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	219648056	219648806	219648528	Y	TMBIM1,PNKD,SLC11A1,TTLL4,CYP27A1	CYP27A1	NA	NA	NA	NA	CYP27A1	3584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	219676094	219676389	219676199	Y	PNKD,SLC11A1,TTLL4,CYP27A1	CYP27A1,WNT6	NA	NA	NA	NA	CYP27A1	31622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	219683782	219684203	219683860	Y	PNKD,SLC11A1	CYP27A1,WNT6	NA	NA	NA	NA	WNT6	38341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	219685114	219685474	219685303	Y	NA	CYP27A1,WNT6	NA	NA	NA	NA	WNT6	37070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	219773515	219774011	219773826	Y	USP37,RQCD1,ZNF142,STK36,TTLL4,NHEJ1,GLB1L,CCDC108,ANKZF1,ANKZF1,ABCB6,WNT6,WNT10A	CDK5R2	NA	NA	NA	NA	CDK5R2	48366	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.81147623888015
chr2	219774108	219774202	219774159	Y	USP37,TTLL4,NHEJ1,ANKZF1,ANKZF1	CDK5R2	NA	NA	NA	NA	CDK5R2	48175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.323604850313496
chr2	220385870	220386219	220385945	Y	ACCN4	GMPPA,TMEM198,CHPF,INHA,OBSL1	NA	NA	NA	NA	TMEM198	20166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	220460061	220460205	220460133	Y	NA	INHA,OBSL1,STK11IP,SLC4A3	NA	NA	NA	NA	STK11IP	377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	221802042	221802413	221802264	Y	NA	NA	NA	NA	NA	NA	AC009502.1	1254525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	222826690	222827411	222827014	Y	NA	NA	EPHA4	IMR90	Hi-C	24141950	FARSB	691645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.488943916330317
chr2	223462160	223462364	223462326	Y	NA	NA	NA	NA	NA	NA	FARSB	56692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	223670470	223670622	223670545	Y	NA	NA	ACSL3,MOGAT1	IMR90	Hi-C	24141950	ACSL3	53030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr2	223757137	223757389	223757313	Y	NA	ACSL3	NA	NA	NA	NA	ACSL3	33485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	223784632	223784923	223784806	Y	NA	NA	NA	NA	NA	NA	ACSL3	60980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	224564336	224564481	224564409	Y	NA	NA	SCG2	IMR90	Hi-C	24141950	AP1S3	136263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	224665714	224665826	224665771	Y	AP1S3	AP1S3	NA	NA	NA	NA	AP1S3	34918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	224751909	224752110	224752042	Y	WDFY1	NA	NA	NA	NA	NA	AP1S3	51165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr2	224761528	224761781	224761678	Y	WDFY1	WDFY1	NA	NA	NA	NA	WDFY1	46323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr2	224773224	224773437	224773430	Y	WDFY1	WDFY1,MRPL44	NA	NA	NA	NA	WDFY1	34667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr2	224808298	224808709	224808400	Y	WDFY1	WDFY1,MRPL44	NA	NA	NA	NA	WDFY1	194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	224852422	224852838	224852675	Y	NA	WDFY1,MRPL44,SERPINE2	NA	NA	NA	NA	MRPL44	32301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	225010758	225010857	225010808	Y	NA	NA	SERPINE2	IMR90	Hi-C	24141950	SERPINE2	108722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.534964468154697
chr2	225340678	225341017	225340847	Y	NA	NA	NA	NA	NA	NA	CUL3	107093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	225392496	225392764	225392746	Y	NA	NA	NA	NA	NA	NA	CUL3	55346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	225880660	225880871	225880768	Y	DOCK10	NA	NA	NA	NA	NA	CUL3	432550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	226867162	226867478	226867316	Y	NA	NA	IRS1,COL4A4,RHBDD1	IMR90	Hi-C	24141950	IRS1	794997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	226895670	226896158	226895921	Y	NA	NA	IRS1	IMR90	Hi-C	24141950	IRS1	766317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr2	226896202	226896600	226896518	Y	NA	NA	IRS1	IMR90	Hi-C	24141950	IRS1	765875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	226979861	226980232	226980018	Y	NA	NA	IRS1,LOC646736	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRS1	682243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr2	226983188	226983709	226983518	Y	NA	NA	IRS1,LOC646736	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IRS1	678766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	227276579	227276895	227276743	Y	NA	NA	NYAP2,IRS1	IMR90	Hi-C	24141950	IRS1	385580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr2	227389268	227389492	227389368	Y	NA	NA	IRS1	IMR90	Hi-C	24141950	IRS1	272983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	227448462	227448628	227448535	Y	NA	NA	IRS1,LOC646736,NYAP2	IMR90	Hi-C	24141950	IRS1	213847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	227603591	227603716	227603639	Y	NA	NA	NA	NA	NA	NA	IRS1	58759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	227665142	227665696	227665306	Y	IRS1	IRS1,RHBDD1	NA	NA	NA	NA	IRS1	2667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.68403036829737
chr2	227665859	227666449	227665964	Y	NA	IRS1,RHBDD1	NA	NA	NA	NA	IRS1	3384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246854683408737
chr2	227842377	227842834	227842635	Y	NA	NA	NA	NA	NA	NA	RHBDD1	144080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	227849549	227849707	227849645	Y	NA	NA	NA	NA	NA	NA	RHBDD1	151252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	228331050	228331499	228331159	Y	NA	AGFG1	AGFG1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	AGFG1	3369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.879607934829496
chr2	228578021	228578290	228578242	Y	NA	SLC19A3	NA	NA	NA	NA	SLC19A3	2438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	228873880	228874070	228873976	Y	C2orf83,SPHKAP	NA	NA	NA	NA	NA	CCL20	197322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	228950123	228950186	228950154	Y	NA	NA	NA	NA	NA	NA	CCL20	273565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	230015685	230015803	230015793	Y	PID1	NA	NA	NA	NA	NA	PID1	118198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	230273013	230273684	230273347	Y	PID1	NA	NA	NA	NA	NA	PID1	139012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	230736228	230736612	230736477	Y	SP110	FBXO36,TRIP12	NA	NA	NA	NA	FBXO36	48406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr2	230784453	230784592	230784556	Y	NA	FBXO36,TRIP12	NA	NA	NA	NA	FBXO36	426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	231276384	231276790	231276706	Y	NA	SP100	NA	NA	NA	NA	SP100	1867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189497846880113
chr2	231277179	231277351	231277276	Y	NA	SP100	NA	NA	NA	NA	SP100	1306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	231299753	231300176	231299905	Y	SP110,SP110,SP140,SP140L,CAB39,SP100,SP100	SP100	NA	NA	NA	NA	SP100	21096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	231322204	231322520	231322312	Y	SP110,SP110,SP140,SP140L,CAB39,CAB39,SP100,SP100	SP100	NA	NA	NA	NA	SP100	43547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	231378000	231378359	231378191	Y	NA	NA	NA	NA	NA	NA	SP100	99343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	231508632	231508937	231508779	Y	GPR55,SP110,SP140,SP140L,CAB39	NA	CAB39,SP140L	IMR90	Hi-C	24141950	CAB39	66623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	231649547	231649844	231649697	Y	NA	NA	NA	NA	NA	NA	BANF1P3	61429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr2	231833929	231834350	231834190	Y	GPR55	NA	NA	NA	NA	NA	C2orf72	65855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	231901045	231901225	231901135	Y	NA	C2orf72,PSMD1	NA	NA	NA	NA	C2orf72	840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	231915077	231915290	231915200	Y	C2orf72	C2orf72,PSMD1	NA	NA	NA	NA	PSMD1	4288	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.23845796593945
chr2	231922388	231922877	231922602	Y	NA	C2orf72,PSMD1	NA	NA	NA	NA	PSMD1	2810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.682716099132512
chr2	232042131	232042529	232042280	Y	NA	ARMC9	NA	NA	NA	NA	ARMC9	18731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	232106599	232106881	232106746	Y	B3GNT7	ARMC9	NA	NA	NA	NA	ARMC9	45339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	232229850	232230117	232229960	Y	NA	B3GNT7	NA	NA	NA	NA	B3GNT7	28137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	232276597	232276762	232276665	Y	B3GNT7	B3GNT7,SNORD82	NA	NA	NA	NA	B3GNT7	18343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	232277113	232277443	232277206	Y	C2orf72	B3GNT7,SNORD82	NA	NA	NA	NA	B3GNT7	18859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.455745860664985
chr2	232330093	232330255	232330170	Y	NA	SNORD82,NCL,LINC00471	NA	NA	NA	NA	SNORD82	6942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	232468888	232470128	232469532	Y	DIS3L2,PTMA,NMUR1	NA	NA	NA	NA	NA	LINC00471	91838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.279561624508995
chr2	232478392	232478857	232478528	Y	DIS3L2,PTMA	NA	NA	NA	NA	NA	PTMA	90748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	232478879	232479328	232479053	Y	NA	NA	NA	NA	NA	NA	PTMA	90277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr2	232526700	232527324	232527119	Y	DIS3L2	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	42281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	232530920	232531416	232531295	Y	NA	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	38189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285149717988735
chr2	232531704	232531853	232531745	Y	NA	PTMA	COPS7B,PTMA	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTMA	37752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	232537656	232538064	232537748	Y	NA	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	31541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr2	232542757	232542767	232542764	Y	NA	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	26838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	232545684	232546083	232545868	Y	COPS7B	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	23522	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.45014860060096
chr2	232546670	232546982	232546826	Y	NA	PTMA	PTMA,PDE6D	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	PTMA	22623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr2	232547138	232547293	232547212	Y	PTMA	PTMA	PTMA,PDE6D	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	PTMA	22312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	232551717	232552221	232552147	Y	NPPC	PTMA	PTMA,PDE6D	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	PTMA	17384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.451472036350103
chr2	232566219	232566469	232566340	Y	NA	PTMA	PTMA	K562	ChIA-PET	22265404	PTMA	3136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434215618131408
chr2	232840477	232840577	232840527	Y	DIS3L2	DIS3L2	NA	NA	NA	NA	DIS3L2	16522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	233563344	233563704	233563468	Y	NA	GIGYF2	NA	NA	NA	NA	GIGYF2	3335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	233703407	233703613	233703510	Y	NEU2	C2orf82	NA	NA	NA	NA	C2orf82	16367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	233763823	233764207	233764133	Y	EFHD1,NGEF	C2orf82	NA	NA	NA	NA	C2orf82	43843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	233766797	233767190	233766879	Y	NA	C2orf82	NA	NA	NA	NA	C2orf82	46817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	233796443	233796630	233796537	Y	NA	NA	NA	NA	NA	NA	C2orf82	76463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	233876295	233876308	233876302	Y	NEU2,NGEF	INPP5D	NA	NA	NA	NA	INPP5D	46369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.292543706805606
chr2	233926628	233927080	233926856	Y	NA	INPP5D	NA	NA	NA	NA	INPP5D	3951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	233927963	233928349	233928218	Y	INPP5D	INPP5D	NA	NA	NA	NA	INPP5D	5286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr2	233949832	233950220	233949929	Y	NA	INPP5D	NA	NA	NA	NA	INPP5D	27155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	234156397	234156705	234156566	Y	INPP5D,DGKD	ATG16L1,SCARNA5	NA	NA	NA	NA	SCARNA5	25668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	234357256	234357513	234357369	Y	NA	NA	NA	NA	NA	NA	DGKD	96103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	234465976	234466363	234466311	Y	HJURP	USP40	NA	NA	NA	NA	USP40	7065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	234608579	234609196	234608912	Y	NA	NA	NA	NA	NA	NA	UGT1A1	57698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	234630754	234630813	234630784	Y	NA	UGT1A1	NA	NA	NA	NA	UGT1A1	36081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	235862299	235862667	235862586	Y	SH3BP4	SH3BP4	NA	NA	NA	NA	SH3BP4	3682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	235863329	235863490	235863430	Y	SH3BP4	SH3BP4	NA	NA	NA	NA	SH3BP4	4712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	235872484	235872869	235872649	Y	NA	SH3BP4	NA	NA	NA	NA	SH3BP4	13867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	235905010	235905389	235905297	Y	SH3BP4	SH3BP4	NA	NA	NA	NA	SH3BP4	46393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194263297367269
chr2	236172421	236172477	236172436	Y	NA	NA	AGAP1	IMR90	Hi-C	24141950	AGAP1	228256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr2	236886303	236886528	236886416	Y	NA	NA	NA	NA	NA	NA	AC079135.1	187562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	237016237	237016450	237016344	Y	NA	NA	NA	NA	NA	NA	AC079135.1	57640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	237073092	237073409	237073337	Y	NA	AC079135.1	NA	NA	NA	NA	AC079135.1	681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	237246448	237246491	237246461	Y	IQCA1	NA	NA	NA	NA	NA	AC079135.1	172358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	237482983	237483115	237483021	Y	NA	NA	NA	NA	NA	NA	AC079135.1	408893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	237876867	237877033	237876943	Y	NA	NA	IQCA1,CXCR7	IMR90	Hi-C	24141950	COPS8	114922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr2	237933842	237934085	237933935	Y	NA	NA	CXCR7,IQCA1,ASB18	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	COPS8	57870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	237992319	237992330	237992325	Y	NA	COPS8,AC105760.2	NA	NA	NA	NA	AC105760.2	130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	238016795	238017153	238016975	Y	NA	COPS8,AC105760.2	NA	NA	NA	NA	AC105760.2	24335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	238018538	238018666	238018550	Y	NA	COPS8,AC105760.2	NA	NA	NA	NA	AC105760.2	26078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	238052381	238052681	238052563	Y	COL6A3	NA	MLPH,COPS8,COL6A3,PRLH,RAB17	IMR90	Hi-C	24141950	AC105760.2	59921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	238066036	238066584	238066320	Y	MLPH,COL6A3	NA	COL6A3,COPS8,MLPH,LRRFIP1	IMR90	Hi-C	24141950	AC105760.2	73576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	238092955	238093156	238093082	Y	NA	NA	COL6A3,MLPH,LRRFIP1,RAB17,PRLH	IMR90	Hi-C	24141950	AC105760.2	100495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	238223884	238224369	238224058	Y	COL6A3	NA	NA	NA	NA	NA	MLPH	167702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr2	238392046	238392381	238392184	Y	LRRFIP1,MLPH	NA	NA	NA	NA	NA	MLPH	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	238508822	238509122	238509050	Y	RAB17,LRRFIP1	RAB17,LRRFIP1	NA	NA	NA	NA	RAB17	565	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.18521485598095
chr2	238578306	238578453	238578407	Y	COL6A3	LRRFIP1	NA	NA	NA	NA	LRRFIP1	44087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chr2	238583352	238583931	238583637	Y	UBE2F,LRRFIP1	LRRFIP1	NA	NA	NA	NA	LRRFIP1	49133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	238598036	238598427	238598303	Y	ESPNL,UBE2F,LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	63817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	238611190	238611575	238611206	Y	LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	76971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	238616188	238616491	238616226	Y	ILKAP,LRRFIP1	NA	NA	NA	NA	NA	LRRFIP1	81969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	238832423	238832667	238832502	Y	NA	UBE2F	NA	NA	NA	NA	UBE2F	40802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	238876433	238876638	238876539	Y	LRRFIP1,UBE2F	UBE2F	NA	NA	NA	NA	UBE2F	2964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	238968617	238969014	238968782	Y	NA	SCLY	NA	NA	NA	NA	SCLY	1087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr2	239017680	239017839	239017760	Y	ESPNL	KLHL30,FAM132B	NA	NA	NA	NA	KLHL30	27524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	239050654	239050828	239050729	Y	KLHL30	KLHL30,FAM132B	NA	NA	NA	NA	KLHL30	5291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	239080379	239080669	239080523	Y	NA	KLHL30,FAM132B,ILKAP	NA	NA	NA	NA	FAM132B	14756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	239085902	239086198	239086162	Y	NA	KLHL30,FAM132B,ILKAP	NA	NA	NA	NA	FAM132B	20279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	239194414	239194788	239194667	Y	NA	HES6,PER2,TRAF3IP1	LOC643387,LOC151174,HES6	IMR90	Hi-C	24141950	PER2	1955	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr2	239347857	239348510	239348285	Y	ASB1	ASB1	NA	NA	NA	NA	ASB1	14474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	239367827	239368002	239367915	Y	NA	ASB1	NA	NA	NA	NA	ASB1	34444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	239426928	239427234	239427055	Y	TWIST2	NA	NA	NA	NA	NA	ASB1	93545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr2	239631175	239631419	239631288	Y	NA	NA	LOC151171,TRAF3IP1,LOC150935	IMR90	Hi-C	24141950	ASB1	297792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	239772979	239773251	239773061	Y	NA	NA	NA	NA	NA	NA	ASB1	439596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.563888699505146
chr2	239779123	239779526	239779330	Y	TWIST2	NA	NA	NA	NA	NA	ASB1	445740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	239968226	239968465	239968347	Y	NA	NA	NA	NA	NA	NA	AC062017.1	352665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	240080723	240081253	240081085	Y	NA	NA	NA	NA	NA	NA	AC062017.1	239877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	240144176	240144295	240144274	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	176835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	240144687	240145031	240144830	Y	NA	NA	NA	NA	NA	NA	AC062017.1	176099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	240145548	240145836	240145702	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	175294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	240147854	240148066	240148024	Y	NA	NA	NA	NA	NA	NA	AC062017.1	173064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	240179337	240179507	240179411	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	141623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr2	240190277	240190476	240190405	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	130654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	240238754	240239047	240238989	Y	NA	NA	NA	NA	NA	NA	AC062017.1	82083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr2	240267449	240267666	240267577	Y	HDAC4	NA	NA	NA	NA	NA	AC062017.1	53464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr2	240302695	240302977	240302812	Y	HDAC4	AC062017.1,HDAC4	NA	NA	NA	NA	AC062017.1	18153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	240321591	240321797	240321685	Y	HDAC4	AC062017.1,HDAC4	NA	NA	NA	NA	HDAC4	243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	240920223	240920529	240920311	Y	NA	NDUFA10	NA	NA	NA	NA	NDUFA10	42290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	241190569	241190767	241190645	Y	NA	AC124861.1	GPC1,ANKMY1,PP14571	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC124861.1	2685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.723308143614715
chr2	241309624	241309945	241309791	Y	GPC1	NA	PP14571,GPC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GPC1	63143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	241561048	241561275	241561167	Y	DUSP28,RNPEPL1,CAPN10,GPR35	CAPN10	NA	NA	NA	NA	CAPN10	36915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	241796889	241797214	241796939	Y	GPR35,AGXT	KIF1A,AGXT	NA	NA	NA	NA	AGXT	8682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.74615265531315
chr2	241845496	241845803	241845554	Y	NA	AGXT	LOC200772,SNED1,MTERFD2	IMR90	Hi-C	24141950	AGXT	39600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	241899989	241900661	241900324	Y	NA	SNED1	NA	NA	NA	NA	SNED1	35594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.413999644762688
chr2	241901706	241902029	241901870	Y	SNED1	SNED1	NA	NA	NA	NA	SNED1	34226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr2	241905496	241905651	241905570	Y	DUSP28	SNED1	NA	NA	NA	NA	SNED1	30604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	241960934	241960944	241960939	Y	AQP12A,PASK	SNED1	NA	NA	NA	NA	SNED1	24679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr2	242030281	242030580	242030300	Y	SNED1,PASK	MTERFD2	NA	NA	NA	NA	MTERFD2	9167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr2	242171569	242171970	242171814	Y	AGXT	ANO7	NA	NA	NA	NA	ANO7	45645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr2	242262018	242262304	242262161	Y	NA	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	HDLBP	7542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr2	242267084	242267405	242267274	Y	MTERFD2	SEPT2,HDLBP,FARP2	NA	NA	NA	NA	HDLBP	12608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr2	242304310	242304654	242304483	Y	FARP2	HDLBP,FARP2	NA	NA	NA	NA	FARP2	10652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr2	242365047	242365293	242365170	Y	NA	NA	NA	NA	NA	NA	FARP2	71389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr2	242480531	242480899	242480752	Y	NA	STK25,BOK	NA	NA	NA	NA	BOK	15237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr2	242549642	242550327	242549774	Y	ATG4B	ATG4B,THAP4	NA	NA	NA	NA	ATG4B	24301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.869745505427674
chr2	242698564	242698745	242698671	Y	THAP4,ATG4B,PDCD1,D2HGDH	D2HGDH,GAL3ST2	NA	NA	NA	NA	GAL3ST2	15495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr2	242703403	242703714	242703570	Y	ATG4B,D2HGDH	D2HGDH,GAL3ST2	NA	NA	NA	NA	GAL3ST2	10526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr2	242710043	242710405	242710079	Y	NA	D2HGDH,GAL3ST2	NA	NA	NA	NA	GAL3ST2	3835	CAGE	HepG2 ENCODE	hg19	FANTOM5	35.7230001547069
chr2	242711564	242711834	242711650	Y	NEU4,GAL3ST2	D2HGDH,GAL3ST2	NA	NA	NA	NA	GAL3ST2	2406	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.04855827991338
chr2	242714145	242714474	242714395	Y	NEU4,D2HGDH,GAL3ST2	D2HGDH	NA	NA	NA	NA	GAL3ST2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.12653292895668
chr2	243028160	243028467	243028224	Y	ATG4B	AC093642.5	NA	NA	NA	NA	AC093642.5	317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.309308498852027
chr20	247683	247718	247701	Y	NA	C20orf96,ZCCHC3,AL034548.1	NA	NA	NA	NA	C20orf96	21672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr20	268547	268840	268655	Y	NA	C20orf96,ZCCHC3,AL034548.1,SOX12	NA	NA	NA	NA	C20orf96	550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	290672	290826	290757	Y	SOX12,NRSN2	C20orf96,ZCCHC3,AL034548.1,SOX12,NRSN2,RP5-1103G7.4	NA	NA	NA	NA	SOX12	13381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264111101627431
chr20	290991	291448	291293	Y	C20orf54	C20orf96,ZCCHC3,AL034548.1,SOX12,NRSN2,RP5-1103G7.4	NA	NA	NA	NA	SOX12	12759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	321375	321752	321587	Y	NA	ZCCHC3,AL034548.1,SOX12,NRSN2,RP5-1103G7.4,TRIB3	NA	NA	NA	NA	NRSN2	3674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	351057	351207	351131	Y	NA	SOX12,NRSN2,RP5-1103G7.4,TRIB3,RBCK1	NA	NA	NA	NA	TRIB3	8054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr20	352488	352859	352625	Y	SRXN1,FAM110A,RBCK1	SOX12,NRSN2,RP5-1103G7.4,TRIB3,RBCK1	NA	NA	NA	NA	TRIB3	6402	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.13434823322738
chr20	353974	354548	354311	Y	SRXN1,FAM110A	SOX12,NRSN2,RP5-1103G7.4,TRIB3,RBCK1	NA	NA	NA	NA	TRIB3	4713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr20	381159	381302	381208	Y	NA	TRIB3,RBCK1	RBCK1	IMR90	Hi-C	24141950	RBCK1	4840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.487298630345149
chr20	382514	382753	382693	Y	CSNK2A1,ZCCHC3,TRIB3,RBCK1	TRIB3,RBCK1	NA	NA	NA	NA	RBCK1	3389	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03951900511134
chr20	453687	453779	453733	Y	NA	TBC1D20	NA	NA	NA	NA	TBC1D20	12490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	483361	483443	483402	Y	NA	TBC1D20,CSNK2A1	NA	NA	NA	NA	CSNK2A1	39022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	519765	520062	519888	Y	NA	CSNK2A1	NA	NA	NA	NA	CSNK2A1	2403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	623135	623319	623297	Y	NA	SRXN1	NA	NA	NA	NA	SRXN1	8695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr20	688235	688475	688275	Y	C20orf46,SCRT2	NA	C20orf54,TCF15,ANGPT4,FAM110A	IMR90	Hi-C	24141950	SRXN1	56221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	823028	823308	823133	Y	FAM110A	FAM110A	NA	NA	NA	NA	FAM110A	10670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	1083260	1083345	1083304	Y	SCRT2	PSMF1	RSPO4	IMR90	Hi-C	24141950	PSMF1	8561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	1097798	1098000	1097899	Y	NA	PSMF1	NA	NA	NA	NA	PSMF1	5892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	1119535	1119804	1119673	Y	NA	PSMF1,TMEM74B	NA	NA	NA	NA	PSMF1	27629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	1124805	1124974	1124890	Y	SCRT2,C20orf202,C20orf46	PSMF1,TMEM74B	NA	NA	NA	NA	PSMF1	32899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	1154843	1155127	1154985	Y	FAM110A,SIRPB2,SIRPB1	TMEM74B,RAD21L1	NA	NA	NA	NA	TMEM74B	8932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	1167289	1167675	1167648	Y	NA	TMEM74B,RAD21L1	NA	NA	NA	NA	TMEM74B	3230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.286463987153593
chr20	1168274	1168908	1168417	Y	NA	TMEM74B,RAD21L1	NA	NA	NA	NA	TMEM74B	4215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr20	1307828	1308261	1308086	Y	SDCBP2	NA	NA	NA	NA	NA	SDCBP2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	1332285	1332772	1332374	Y	C20orf46,SDCBP2	SDCBP2,FKBP1A	NA	NA	NA	NA	SDCBP2	24402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr20	1333009	1333271	1333126	Y	NA	SDCBP2,FKBP1A	NA	NA	NA	NA	SDCBP2	25126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr20	1333597	1333845	1333762	Y	NA	SDCBP2,FKBP1A	NA	NA	NA	NA	SDCBP2	25714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr20	1372355	1372517	1372472	Y	NA	FKBP1A	NA	NA	NA	NA	FKBP1A	549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	1372569	1372994	1372930	Y	PSMF1,SDCBP2,SIRPB2,SIRPB1	FKBP1A	NA	NA	NA	NA	FKBP1A	763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	1396685	1396983	1396828	Y	SDCBP2,SIRPA	FKBP1A	SNPH,RAD21L1,FKBP1A-SDCBP2,LOC100507495	IMR90	Hi-C	24141950	FKBP1A	24879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	1398801	1399138	1399021	Y	FKBP1A	FKBP1A	SNPH,RAD21L1,FKBP1A-SDCBP2,LOC100507495	IMR90	Hi-C	24141950	FKBP1A	26995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr20	1757222	1757297	1757260	Y	NA	NA	NA	NA	NA	NA	SIRPA	115857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	1757792	1758093	1758078	Y	NA	NA	NA	NA	NA	NA	SIRPA	115061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr20	1782055	1782441	1782118	Y	NA	NA	SIRPA,LOC100289473,PDYN,STK35	IMR90	Hi-C	24141950	SIRPA	90713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	1792448	1792844	1792660	Y	NA	NA	STK35,SIRPA,LOC100507495,SNPH,FKBP1A-SDCBP2	IMR90	Hi-C	24141950	SIRPA	80310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr20	1808617	1808803	1808717	Y	PDYN,SIRPA,SIRPA,SIRPA,PDYN,PDYN	NA	SIRPA,STK35	IMR90	Hi-C	24141950	SIRPA	64351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.335112565700488
chr20	1809297	1809437	1809336	Y	SDCBP2,SIRPA,SIRPA,SIRPA	NA	SIRPA,STK35	IMR90	Hi-C	24141950	SIRPA	63717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.845255707744071
chr20	1869680	1870159	1869931	Y	NSFL1C,SIRPB2,SIRPB1,SIRPA,SIRPA,SIRPA	SIRPA	NA	NA	NA	NA	SIRPA	2995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	1873360	1873375	1873370	Y	NA	SIRPA	NA	NA	NA	NA	SIRPA	206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	2090589	2090758	2090698	Y	NA	STK35	NA	NA	NA	NA	STK35	10332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	2851057	2851398	2851292	Y	NA	VPS16,PTPRA	NA	NA	NA	NA	PTPRA	8227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	2855066	2855678	2855300	Y	NA	VPS16,PTPRA	NA	NA	NA	NA	PTPRA	12236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	3155446	3155862	3155811	Y	EBF4,PTPRA,C20orf194	FASTKD5,UBOX5,DDRGK1,ITPA	NA	NA	NA	NA	UBOX5	16604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	3156363	3156554	3156472	Y	EBF4,PTPRA,PTPRA,OXT,AVP,C20orf194	FASTKD5,UBOX5,DDRGK1,ITPA	NA	NA	NA	NA	UBOX5	17521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr20	3159596	3159937	3159912	Y	PTPRA,PTPRA,OXT,AVP,C20orf194	FASTKD5,UBOX5,DDRGK1,ITPA	NA	NA	NA	NA	UBOX5	20754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	3170247	3170648	3170474	Y	NA	FASTKD5,UBOX5,DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	DDRGK1	12683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr20	3188788	3188839	3188809	Y	NA	UBOX5,DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	ITPA	1274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214479270735989
chr20	3200687	3201082	3200885	Y	NA	DDRGK1,ITPA,SLC4A11	NA	NA	NA	NA	ITPA	13173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr20	3348660	3349006	3348744	Y	FASTKD5,UBOX5,GFRA4	C20orf194	NA	NA	NA	NA	C20orf194	37266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	3472887	3473113	3473000	Y	NA	ATRN	NA	NA	NA	NA	ATRN	23200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	3720045	3720197	3720115	Y	HSPA12B	C20orf27,SPEF1,CENPB,CDC25B	NA	NA	NA	NA	C20orf27	26837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	3779808	3780100	3779895	Y	PANK2,PANK2,CDC25B	C20orf27,SPEF1,CENPB,CDC25B,MAVS	NA	NA	NA	NA	CDC25B	14230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	3788108	3788452	3788409	Y	NA	C20orf27,SPEF1,CENPB,CDC25B,MAVS	NA	NA	NA	NA	CDC25B	22530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	3909447	3909819	3909642	Y	RNF24,RNF24,PANK2	PANK2	NA	NA	NA	NA	PANK2	41961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	3932717	3933076	3932937	Y	NA	NA	MIR103B2,PANK2	IMR90	Hi-C	24141950	RNF24	61153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212833984750821
chr20	3961377	3961729	3961667	Y	PANK2,PANK2,RNF24,RNF24	RNF24,FTLP3	NA	NA	NA	NA	RNF24	32500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.202479929176725
chr20	4063526	4063882	4063813	Y	NA	SMOX	RNF24,PANK2,MAVS	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SMOX	35745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	4072203	4072410	4072307	Y	NA	SMOX	RNF24,PANK2,MAVS,LOC728228,CDC25B,C20orf29,MIR103B2,SMOX,ADRA1D	IMR90	Hi-C	24141950	SMOX	27217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	4116351	4116485	4116423	Y	PANK2,PANK2,SMOX	SMOX	ADRA1D,SMOX	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SMOX	16724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.52986748924003
chr20	4148418	4148828	4148571	Y	NA	SMOX	NA	NA	NA	NA	SMOX	48791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.355820165241481
chr20	4198420	4198722	4198592	Y	SMOX,ADRA1D	ADRA1D	NA	NA	NA	NA	ADRA1D	28999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	4203123	4203484	4203336	Y	NA	ADRA1D	NA	NA	NA	NA	ADRA1D	24237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	4206645	4206924	4206784	Y	NA	ADRA1D	NA	NA	NA	NA	ADRA1D	20797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	4906233	4906312	4906273	Y	RASSF2,RASSF2,SLC23A2,CDS2	NA	NA	NA	NA	NA	SNORA31	58603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	4942791	4943059	4943002	Y	RASSF2,RASSF2,SLC23A2,CDS2	SLC23A2	NA	NA	NA	NA	SLC23A2	45880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	4954142	4954446	4954407	Y	PRNP,PRNP,RASSF2,RASSF2,SLC23A2,CDS2	SLC23A2	NA	NA	NA	NA	SLC23A2	34493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr20	5046140	5046913	5046758	Y	PRNP,PRNP,RASSF2,RASSF2,SLC23A2	NA	SLC23A2,C20orf30,RASSF2,PCNA,PCNA-AS1,PRND,PRNT,CDS2	IMR90	Hi-C	24141950	SLC23A2	57201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	5060940	5061369	5061194	Y	PRNP,PRNP,RASSF2,RASSF2,SLC23A2	PCNA,CDS2	NA	NA	NA	NA	PCNA	43903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	5072801	5072926	5072885	Y	NA	PCNA,CDS2	NA	NA	NA	NA	PCNA	32346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	5512444	5512652	5512587	Y	CDS2,TRMT6,CHGB,GPCPD1	NA	NA	NA	NA	NA	GPCPD1	77020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	5553446	5553705	5553635	Y	NA	GPCPD1	NA	NA	NA	NA	GPCPD1	35967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	5589880	5590681	5590650	Y	CDS2,TRMT6,C20orf196,GPCPD1	GPCPD1	NA	NA	NA	NA	GPCPD1	208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr20	5635212	5635550	5635485	Y	TRMT6,GPCPD1	GPCPD1	C20orf196,GPCPD1,TRMT6	IMR90	Hi-C	24141950	GPCPD1	45540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	5669321	5669748	5669457	Y	GPCPD1,TRMT6	NA	GPCPD1,C20orf196	IMR90	Hi-C	24141950	C20orf196	59291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	5695211	5695702	5695385	Y	C20orf196	C20orf196	GPCPD1,C20orf196	IMR90	Hi-C	24141950	C20orf196	33337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr20	5717960	5718260	5718168	Y	C20orf196	C20orf196	NA	NA	NA	NA	C20orf196	10779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	5739573	5739619	5739595	Y	PROKR2	C20orf196	NA	NA	NA	NA	C20orf196	10534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	5816621	5816994	5816701	Y	NA	NA	NA	NA	NA	NA	RNU1-55P	51707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	5900000	5900262	5900165	Y	GPCPD1,TRMT6	RNU1-55P,CHGB,TRMT6,MCM8	NA	NA	NA	NA	CHGB	9924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr20	6015657	6015992	6015825	Y	NA	CRLS1,LRRN4	NA	NA	NA	NA	LRRN4	16703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr20	6094285	6094396	6094341	Y	NA	FERMT1	NA	NA	NA	NA	FERMT1	7795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	6684913	6685132	6685035	Y	NA	NA	NA	NA	NA	NA	RP4-775C13.1	492567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	7058177	7058257	7058218	Y	NA	NA	NA	NA	NA	NA	HAO1	860864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	7978054	7978163	7978110	Y	NA	RP5-971N18.3,TMX4	NA	NA	NA	NA	RP5-971N18.3	19707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	8173456	8173854	8173482	Y	NA	NA	NA	NA	NA	NA	PLCB1	62632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	8210701	8210953	8210827	Y	NA	NA	NA	NA	NA	NA	PLCB1	99877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr20	8380615	8380981	8380808	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	269791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	8408277	8408546	8408511	Y	TMX4	NA	NA	NA	NA	NA	PLCB1	297453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr20	8412863	8413194	8412910	Y	TMX4,PLCB1	NA	NA	NA	NA	NA	PLCB1	302039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	8435134	8435511	8435284	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	324310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	8437471	8437869	8437556	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	326647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr20	8464613	8464952	8464618	Y	PLCB1	NA	NA	NA	NA	NA	PLCB1	353789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	8619924	8620034	8619979	Y	NA	NA	NA	NA	NA	NA	PLCB4	427376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	10307719	10307737	10307728	Y	NA	SNAP25-AS1	NA	NA	NA	NA	SNAP25-AS1	39687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	10451023	10451290	10451134	Y	NA	MKKS	NA	NA	NA	NA	MKKS	38153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	10455990	10456132	10456072	Y	NA	MKKS	NA	NA	NA	NA	MKKS	43120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	10466571	10466854	10466711	Y	NA	NA	NA	NA	NA	NA	MKKS	53701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr20	10469146	10469624	10469385	Y	NA	NA	NA	NA	NA	NA	MKKS	56276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	10472654	10473100	10472965	Y	NA	NA	NA	NA	NA	NA	MKKS	59784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	10482481	10482747	10482670	Y	NA	NA	NA	NA	NA	NA	MKKS	69611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	10486121	10486184	10486148	Y	NA	NA	NA	NA	NA	NA	MKKS	73251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	10492212	10492484	10492413	Y	NA	NA	NA	NA	NA	NA	MKKS	79342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr20	10585324	10585599	10585462	Y	NA	JAG1	NA	NA	NA	NA	JAG1	39415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr20	10651368	10651598	10651475	Y	NA	JAG1	NA	NA	NA	NA	JAG1	26354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr20	10652083	10652420	10652292	Y	JAG1	JAG1	NA	NA	NA	NA	JAG1	27069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.294680618963047
chr20	10655214	10655688	10655561	Y	NA	JAG1	NA	NA	NA	NA	JAG1	30200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr20	10692033	10692226	10692094	Y	MKKS	NA	NA	NA	NA	NA	JAG1	67019	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.62181778264807
chr20	12250218	12250236	12250226	Y	NA	NA	NA	NA	NA	NA	BTBD3	380847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	13035099	13035480	13035216	Y	SPTLC3	SPTLC3	NA	NA	NA	NA	SPTLC3	47472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr20	13036502	13036844	13036725	Y	NA	SPTLC3	NA	NA	NA	NA	SPTLC3	48875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	13088080	13088439	13088260	Y	NA	NA	NA	NA	NA	NA	SPTLC3	100453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	13183309	13183449	13183391	Y	NA	ISM1	NA	NA	NA	NA	ISM1	16969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	13221839	13221847	13221843	Y	NA	ISM1	NA	NA	NA	NA	ISM1	21421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	13311967	13312338	13312291	Y	NA	NA	NA	NA	NA	NA	ISM1	111549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	13317482	13317575	13317520	Y	ESF1	NA	NA	NA	NA	NA	ISM1	117064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.385567039584513
chr20	13379016	13379145	13379075	Y	NA	NA	NA	NA	NA	NA	ISM1	178598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	13380021	13380161	13380091	Y	NA	NA	NA	NA	NA	NA	ISM1	179603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	13427146	13427424	13427285	Y	NA	NA	NA	NA	NA	NA	TASP1	190163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	13434936	13435260	13435184	Y	NA	NA	NA	NA	NA	NA	TASP1	182327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	13734374	13734725	13734663	Y	NA	ESF1	NA	NA	NA	NA	ESF1	28807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	13757612	13757978	13757886	Y	NA	ESF1	NA	NA	NA	NA	ESF1	5554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	14800025	14800243	14800134	Y	NA	NA	NA	NA	NA	NA	FLRT3	483763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	16555525	16555956	16555640	Y	NA	KIF16B	NA	NA	NA	NA	KIF16B	3447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146437361812958
chr20	17538189	17538505	17538334	Y	NA	BFSP1,DSTN	NA	NA	NA	NA	BFSP1	9360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	17554539	17554936	17554702	Y	NA	BFSP1,DSTN	NA	NA	NA	NA	DSTN	6031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	17591305	17591483	17591343	Y	NA	BFSP1,DSTN	NA	NA	NA	NA	DSTN	42797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	17637776	17637930	17637851	Y	BANF2	RRBP1	NA	NA	NA	NA	RRBP1	23010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	17644857	17645185	17645058	Y	NA	RRBP1	NA	NA	NA	NA	RRBP1	15755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr20	17839663	17840033	17839936	Y	RRBP1,SNX5,SNX5,C20orf72	NA	BANF2,RRBP1,BFSP1,DSTN,SNX5	IMR90	Hi-C	24141950	SNORD17	101556	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.4643638200132
chr20	17876981	17877249	17877175	Y	NA	NA	BANF2,BFSP1,RRBP1,DSTN,SNX5,C20orf72	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNORD17	64340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	17946136	17946538	17946496	Y	SNX5,SNX5	SNORD17,SNX5,PTMAP3	NA	NA	NA	NA	SNX5	1085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.354505896076623
chr20	18276093	18276447	18276109	Y	CSRP2BP	ZNF133	NA	NA	NA	NA	ZNF133	8972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	18565876	18566072	18565973	Y	CSRP2BP,ZNF133,POLR3F,SEC23B,SEC23B,SEC23B,DTD1	LINC00493,DTD1	NA	NA	NA	NA	DTD1	465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	18700394	18700719	18700556	Y	NA	NA	NA	NA	NA	NA	DTD1	133857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	19213558	19213957	19213665	Y	SLC24A3	NA	NA	NA	NA	NA	RP1-122P22.2	522395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	19783112	19783320	19783290	Y	NA	RP1-122P22.2	RIN2,SLC24A3	IMR90	Hi-C	24141950	RP1-122P22.2	46760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	19796265	19796476	19796342	Y	RIN2,RIN2	NA	RIN2,SLC24A3,NAA20	IMR90	Hi-C	24141950	RP1-122P22.2	59913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	19804713	19804972	19804782	Y	NA	NA	RIN2,SLC24A3,NAA20	IMR90	Hi-C	24141950	RP1-122P22.2	68361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	19860938	19861220	19861002	Y	NA	NA	SLC24A3,RIN2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP1-122P22.2	124586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	20432950	20433312	20432989	Y	C20orf26,INSM1	NA	NA	NA	NA	NA	RALGAPA2	257819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	20586775	20587103	20586803	Y	RALGAPA2	NA	NA	NA	NA	NA	RALGAPA2	104028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	20652620	20652826	20652771	Y	NA	RALGAPA2	NA	NA	NA	NA	RALGAPA2	38305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	20724152	20724406	20724200	Y	RALGAPA2	RALGAPA2	RALGAPA2	IMR90	Hi-C	24141950	RALGAPA2	33021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	21147247	21147656	21147458	Y	NA	PLK1S1	NA	NA	NA	NA	PLK1S1	42623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	21155323	21155529	21155428	Y	NA	NA	NA	NA	NA	NA	PLK1S1	50699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	22078229	22078315	22078273	Y	NA	NA	NA	NA	NA	NA	LINC00261	478965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	22392618	22392869	22392732	Y	NA	NA	NA	NA	NA	NA	LINC00261	164411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr20	22411468	22411729	22411599	Y	NA	NA	NA	NA	NA	NA	LINC00261	145551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.54449536912901
chr20	22471596	22471813	22471642	Y	FOXA2,FOXA2	NA	NA	NA	NA	NA	LINC00261	85467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.818468388551064
chr20	22501465	22501665	22501547	Y	NA	NA	NA	NA	NA	NA	LINC00261	55615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	22555806	22556424	22556290	Y	NA	LINC00261,FOXA2	NA	NA	NA	NA	LINC00261	856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	22558447	22558719	22558568	Y	FOXA2,FOXA2	LINC00261,FOXA2	NA	NA	NA	NA	LINC00261	1167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.923159534461727
chr20	22776496	22776845	22776664	Y	NA	NA	GZF1,NXT1	IMR90	Hi-C	24141950	FOXA2	212403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	23132994	23133379	23133148	Y	THBD,CD93,GZF1,CST3	NA	THBD	K562	ChIA-PET	22265404	NXT1	195994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr20	23136585	23137102	23136883	Y	THBD,CD93,GZF1	NA	NA	NA	NA	NA	NXT1	192271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	23138539	23138715	23138586	Y	THBD,CD93,GZF1	NA	NA	NA	NA	NA	NXT1	190658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	23347147	23347295	23347221	Y	THBD,CD93,GZF1	NXT1,RP3-322G13.7,RP3-322G13.5,GZF1	NA	NA	NA	NA	GZF1	6360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	23360936	23361138	23361045	Y	SSTR4,NAPB	NXT1,RP3-322G13.7,RP3-322G13.5,GZF1,NAPB	NA	NA	NA	NA	GZF1	20149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	23640355	23640543	23640449	Y	CST9	CST3	NA	NA	NA	NA	CST3	23245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.416628183092403
chr20	24931025	24931263	24931216	Y	CST7,C20orf3	NA	NA	NA	NA	NA	ACSS1	106353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	25214082	25214352	25214216	Y	ENTPD6,PYGB	ENTPD6,PYGB	NA	NA	NA	NA	PYGB	12353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr20	25218471	25218756	25218634	Y	NA	ENTPD6,PYGB	NA	NA	NA	NA	PYGB	7949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr20	25227906	25228088	25227908	Y	NA	PYGB	NA	NA	NA	NA	PYGB	1201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	25229395	25229593	25229494	Y	NA	PYGB	NA	NA	NA	NA	PYGB	2690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	25267859	25268242	25268026	Y	NA	PYGB	NA	NA	NA	NA	PYGB	41154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	25273617	25273934	25273643	Y	NA	PYGB	NA	NA	NA	NA	PYGB	46912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	25291624	25291957	25291812	Y	NA	NA	NA	NA	NA	NA	PYGB	64919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	25305115	25305524	25305270	Y	NA	NA	NA	NA	NA	NA	ABHD12	64095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	25305837	25305970	25305904	Y	NA	NA	NA	NA	NA	NA	ABHD12	63649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr20	25445422	25445550	25445504	Y	ACSS1,ABHD12	NA	NA	NA	NA	NA	GINS1	59059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	25522357	25522633	25522495	Y	NA	NINL	NA	NA	NA	NA	NINL	41520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	25671297	25671837	25671511	Y	NA	ZNF337	NA	NA	NA	NA	ZNF337	3640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	25846181	25846562	25846485	Y	ZNF337	NA	NA	NA	NA	NA	RP13-401N8.1	116327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr20	26116339	26116766	26116505	Y	NA	NA	NA	NA	NA	NA	MIR663A	113396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	29647996	29648434	29648295	Y	DEFB121,DEFB116	FRG1B	NA	NA	NA	NA	FRG1B	38139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	29649919	29650288	29650100	Y	NA	FRG1B	NA	NA	NA	NA	FRG1B	40062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	30105267	30105465	30105369	Y	HM13	HM13	NA	NA	NA	NA	HM13	5036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	30109241	30109638	30109448	Y	HM13	HM13	NA	NA	NA	NA	HM13	9010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	30110463	30111086	30110768	Y	HM13	HM13	NA	NA	NA	NA	HM13	10232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	30148718	30149081	30148825	Y	HCK,HM13	HM13,ID1	NA	NA	NA	NA	ID1	42005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	30158598	30158945	30158767	Y	NA	ID1	NA	NA	NA	NA	ID1	32141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	30161920	30162316	30162154	Y	NA	ID1	NA	NA	NA	NA	ID1	28770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	30175524	30175854	30175562	Y	NA	ID1,COX4I2	NA	NA	NA	NA	ID1	15232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	30182515	30183026	30182914	Y	NA	ID1,COX4I2	HM13	MCF7	ChIA-PET	22265404	ID1	8060	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.93391491757458
chr20	30183712	30184220	30184085	Y	ID1	ID1,COX4I2	HM13	MCF7	ChIA-PET	22265404	ID1	6866	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.11791445800127
chr20	30190743	30190994	30190797	Y	ID1	ID1,COX4I2	NA	NA	NA	NA	ID1	92	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr20	30191850	30192346	30192159	Y	ID1	ID1,COX4I2	NA	NA	NA	NA	ID1	764	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.89759618580006
chr20	30194967	30195344	30195216	Y	NA	ID1,COX4I2	NA	NA	NA	NA	ID1	3881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.330838741385604
chr20	30196293	30196740	30196417	Y	ID1	ID1,COX4I2	NA	NA	NA	NA	ID1	5207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.680739284719834
chr20	30200712	30201016	30200864	Y	TTLL9,DUSP15,DEFB116,DEFB121	ID1,COX4I2	NA	NA	NA	NA	ID1	9626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr20	30249247	30249862	30249570	Y	TTLL9	COX4I2	NA	NA	NA	NA	COX4I2	25556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.523787769588016
chr20	30255856	30255976	30255884	Y	NA	COX4I2	NA	NA	NA	NA	COX4I2	32165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr20	30260311	30260679	30260495	Y	NA	COX4I2,BCL2L1	NA	NA	NA	NA	COX4I2	36620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	30262675	30263005	30262853	Y	HCK,BCL2L1	COX4I2,BCL2L1	NA	NA	NA	NA	COX4I2	38984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	30263216	30263335	30263276	Y	NA	COX4I2,BCL2L1	NA	NA	NA	NA	COX4I2	39525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	30263480	30263875	30263840	Y	NA	COX4I2,BCL2L1	NA	NA	NA	NA	COX4I2	39789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr20	30266315	30266710	30266574	Y	NA	COX4I2,BCL2L1	NA	NA	NA	NA	COX4I2	42624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	30292336	30292785	30292516	Y	NA	BCL2L1,TPX2	COX4I2	IMR90	Hi-C	24141950	BCL2L1	17007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr20	30298803	30298834	30298814	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	10958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	30300504	30300973	30300648	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	8819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr20	30301047	30301377	30301326	Y	NA	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	8415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.177007390755775
chr20	30303594	30303801	30303667	Y	TTLL9,DUSP15	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	5991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr20	30305141	30305549	30305422	Y	PLAGL2,HCK	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	4243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	30307720	30308274	30308104	Y	POFUT1	BCL2L1,TPX2	NA	NA	NA	NA	BCL2L1	1518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.59198977625581
chr20	30699679	30699866	30699769	Y	BCL2L1,HCK,C20orf112,TM9SF4,PLAGL2	TM9SF4	NA	NA	NA	NA	TM9SF4	4370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	30700574	30701059	30700820	Y	HCK,C20orf112,TM9SF4,PLAGL2	TM9SF4	NA	NA	NA	NA	TM9SF4	5265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	30705137	30705472	30705281	Y	HCK,PLAGL2	TM9SF4	NA	NA	NA	NA	TM9SF4	9828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	30796713	30797081	30796897	Y	NA	PLAGL2,POFUT1	NA	NA	NA	NA	POFUT1	3030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	31063072	31063625	31063366	Y	NA	NA	ASXL1	IMR90	Hi-C	24141950	C20orf112	107251	CAGE	HepG2 ENCODE	hg19	FANTOM5	9.76128365148694
chr20	31069966	31070213	31070090	Y	NA	NA	ASXL1	IMR90	Hi-C	24141950	C20orf112	100663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	31099798	31099830	31099816	Y	NA	NA	NA	NA	NA	NA	C20orf112	71046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	31126196	31126450	31126244	Y	NA	C20orf112	NA	NA	NA	NA	C20orf112	44426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	31126982	31127359	31127172	Y	NA	C20orf112	NA	NA	NA	NA	C20orf112	43517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr20	31127706	31127839	31127777	Y	ASXL1	C20orf112	NA	NA	NA	NA	C20orf112	43037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr20	31171182	31171312	31171248	Y	DNMT3B,C20orf203	C20orf112	NA	NA	NA	NA	C20orf112	306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.177990131493122
chr20	31269107	31269491	31269215	Y	C20orf185,C20orf203	NA	NA	NA	NA	NA	COMMD7	60312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr20	31373290	31373636	31373312	Y	C20orf185,DNMT3B,DNMT3B	COMMD7,DNMT3B,MAPRE1	MAPRE1	IMR90	Hi-C	24141950	DNMT3B	25099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	31560072	31560429	31560192	Y	CDK5RAP1	BPIFB2	NA	NA	NA	NA	BPIFB2	32977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	31597104	31597733	31597394	Y	BPIL1	BPIFB2,BPIFB6	NA	NA	NA	NA	BPIFB2	3698	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.69692266356767
chr20	31998840	31999088	31998873	Y	C20orf185	CDK5RAP1,SNTA1	CDK5RAP1	IMR90	Hi-C	24141950	CDK5RAP1	11473	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175693121590918
chr20	32093960	32094027	32093984	Y	NA	CBFA2T2	NA	NA	NA	NA	CBFA2T2	18079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	32142835	32143155	32142948	Y	C20orf186,CDK5RAP1,CHMP4B	NA	NA	NA	NA	NA	CBFA2T2	66954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.872705572184901
chr20	32321714	32321896	32321832	Y	NA	E2F1,ZNF341	NA	NA	NA	NA	ZNF341	4251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr20	32400902	32401106	32400958	Y	CHMP4B	CHMP4B	NA	NA	NA	NA	CHMP4B	3792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr20	32694090	32694253	32694172	Y	NA	EIF2S2,RPS2P1	NA	NA	NA	NA	EIF2S2	3885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	32803033	32803441	32803244	Y	NA	NA	ITCH,DYNLRB1,ASIP	IMR90	Hi-C	24141950	AHCY	94167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	32803456	32803920	32803688	Y	NA	NA	ITCH,DYNLRB1,ASIP	IMR90	Hi-C	24141950	AHCY	93688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.289915168475891
chr20	32989671	32989803	32989744	Y	NA	ITCH,CDC42P1	NA	NA	NA	NA	CDC42P1	1169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	33064297	33064587	33064427	Y	ACSS2	FDX1P1,DYNLRB1	NA	NA	NA	NA	FDX1P1	2018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr20	33150860	33150919	33150894	Y	NA	DYNLRB1	NA	NA	NA	NA	DYNLRB1	48646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	33152713	33153029	33152857	Y	TP53INP2	NA	NA	NA	NA	NA	DYNLRB1	50499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	33263826	33263865	33263846	Y	MYH7B	PIGU,TP53INP2	NA	NA	NA	NA	PIGU	916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	33294754	33295084	33294783	Y	NA	PIGU,TP53INP2	NA	NA	NA	NA	TP53INP2	4660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	33491673	33492056	33491689	Y	TP53INP2,ACSS2	ACSS2,GGT7,GSS	NA	NA	NA	NA	GGT7	33010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	33653192	33653349	33653271	Y	NA	TRPC4AP	NA	NA	NA	NA	TRPC4AP	25325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	33699049	33699250	33699220	Y	TRPC4AP,EDEM2	TRPC4AP	NA	NA	NA	NA	TRPC4AP	20375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	33906285	33906606	33906471	Y	GSS,EIF6,EIF6	EDEM2,EIF6	FAM83C,EIF6	HELA	5C	22955621	EIF6	35497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	33908268	33908438	33908376	Y	NA	EDEM2,EIF6	FAM83C,EIF6	HELA	5C	22955621	EIF6	37480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	34127589	34128004	34127717	Y	NA	NA	NA	NA	NA	NA	ERGIC3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.305857317529728
chr20	34217204	34217560	34217502	Y	NA	SPAG4,CPNE1,RBM12	NA	NA	NA	NA	SPAG4	15390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	34330989	34331372	34331294	Y	SPAG4,SCAND1,SCAND1,PHF20,RBM39	ROMO1,NFS1,RBM39,RPF2P1,PHF20	NA	NA	NA	NA	RBM39	2755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	34357066	34357356	34357208	Y	NA	RBM39,RPF2P1,PHF20	NA	NA	NA	NA	PHF20	540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr20	34463368	34463773	34463624	Y	NFS1	RNU4-40P	NA	NA	NA	NA	RNU4-40P	9808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	34652590	34653055	34652672	Y	NA	EPB41L1	LOC647979,PHF20,SCAND1,C20orf152,EPB41L1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	EPB41L1	24371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	34658286	34658599	34658390	Y	EPB41L1	EPB41L1	LOC647979,C20orf152,EPB41L1,PHF20	IMR90	Hi-C	24141950	EPB41L1	18827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	34790985	34791133	34791034	Y	NA	NA	NA	NA	NA	NA	DLGAP4	101125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	34803190	34803436	34803313	Y	NA	NA	NA	NA	NA	NA	DLGAP4	88822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	35083291	35083376	35083331	Y	EPB41L1,DLGAP4,NDRG3,KIAA0889,KIAA0889	NA	NA	NA	NA	NA	MYL9	84511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	35102828	35103254	35103050	Y	NA	NA	NA	NA	NA	NA	MYL9	64633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35112957	35113192	35113075	Y	TGIF2	NA	NA	NA	NA	NA	MYL9	54695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35172533	35172668	35172598	Y	MYL9	MYL9,RP5-977B1.7,TGIF2	NA	NA	NA	NA	MYL9	4646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	35212579	35212832	35212706	Y	NA	MYL9,RP5-977B1.7,TGIF2,C20orf24	NA	NA	NA	NA	TGIF2	12688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35234952	35235695	35235080	Y	NA	RP5-977B1.7,TGIF2,C20orf24	NA	NA	NA	NA	C20orf24	2815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr20	35239893	35239986	35239939	Y	NA	RP5-977B1.7,TGIF2,C20orf24	NA	NA	NA	NA	C20orf24	7756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	35258337	35258631	35258590	Y	RBL1,SLA2	C20orf24	NA	NA	NA	NA	C20orf24	26200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35275298	35275483	35275312	Y	NA	C20orf24	NA	NA	NA	NA	C20orf24	43161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	35305263	35305453	35305359	Y	NA	NA	NA	NA	NA	NA	NDRG3	67028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	35305679	35305903	35305811	Y	NA	NA	NA	NA	NA	NA	NDRG3	66578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr20	35362274	35362463	35362369	Y	NA	NDRG3,DSN1	NA	NA	NA	NA	NDRG3	10018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr20	35490387	35490628	35490526	Y	MANBAL,KIAA0889	NA	KIAA0889	MCF7	ChIA-PET	22265404	SAMHD1	87618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr20	35572677	35573004	35572914	Y	RBL1,TGIF2,TGIF2,SLA2,SAMHD1	SAMHD1	NA	NA	NA	NA	SAMHD1	5242	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	35583660	35583902	35583783	Y	TGIF2,TGIF2,TGIF2	SAMHD1	NA	NA	NA	NA	SAMHD1	5414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.432901348966551
chr20	35612420	35612442	35612434	Y	RBL1	SAMHD1	NA	NA	NA	NA	SAMHD1	34174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr20	35723463	35723698	35723601	Y	NA	RBL1	NA	NA	NA	NA	RBL1	1275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	35851515	35851770	35851561	Y	SAMHD1,SRC,MANBAL,CTNNBL1	RPN2	NA	NA	NA	NA	RPN2	46702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35873841	35874236	35874039	Y	NA	MANBAL	NA	NA	NA	NA	MANBAL	41805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35874402	35874620	35874497	Y	NA	MANBAL	NA	NA	NA	NA	MANBAL	41421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35880247	35880630	35880494	Y	NA	MANBAL	NA	NA	NA	NA	MANBAL	35411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	35922737	35923093	35922847	Y	SAMHD1,CTNNBL1,MANBAL,SRC	MANBAL,SRC	NA	NA	NA	NA	MANBAL	6696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	35960561	35961009	35960864	Y	NA	MANBAL,SRC	NA	NA	NA	NA	SRC	10079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr20	35964135	35964688	35964336	Y	SAMHD1,CTNNBL1,MANBAL,SRC	MANBAL,SRC	NA	NA	NA	NA	SRC	6400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	35964748	35965459	35965134	Y	NA	MANBAL,SRC	NA	NA	NA	NA	SRC	5629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	35972053	35972195	35972121	Y	SAMHD1,CTNNBL1,MANBAL,SRC	SRC	NA	NA	NA	NA	SRC	965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr20	35976271	35976569	35976418	Y	NA	SRC	NA	NA	NA	NA	SRC	5183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	36007590	36007925	36007762	Y	SAMHD1,CTNNBL1,MANBAL,SRC	SRC	NA	NA	NA	NA	SRC	36502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	36034782	36035452	36035129	Y	C20orf132,VSTM2L,NNAT	RPL7AP14	NA	NA	NA	NA	RPL7AP14	36484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.298131800285346
chr20	36132626	36132893	36132840	Y	NA	BLCAP	NA	NA	NA	NA	BLCAP	21440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	36135409	36135682	36135567	Y	NA	BLCAP	NA	NA	NA	NA	BLCAP	18651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr20	36154671	36154957	36154793	Y	BLCAP,BLCAP,BLCAP	BLCAP	NA	NA	NA	NA	BLCAP	338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr20	36339461	36339780	36339670	Y	GHRH,CTNNBL1	CTNNBL1	NA	NA	NA	NA	CTNNBL1	19053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	36389387	36389716	36389551	Y	NA	NA	VSTM2L	IMR90	Hi-C	24141950	CTNNBL1	68979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	36616982	36617239	36617111	Y	NA	TTI1,RPRD1B	NA	NA	NA	NA	TTI1	42631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	36621379	36621533	36621455	Y	NNAT,VSTM2L	TTI1,RPRD1B	NA	NA	NA	NA	TTI1	38337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	36763112	36763416	36763201	Y	NA	TGM2	NA	NA	NA	NA	TGM2	29564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	36772576	36772945	36772677	Y	RPRD1B,BPI	TGM2	NA	NA	NA	NA	TGM2	20035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr20	36796708	36797026	36796907	Y	CTNNBL1,RPRD1B,RALGAPB,BPI	TGM2	TGM2	MCF7	ChIA-PET	22265404	TGM2	3728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	37229958	37230063	37230010	Y	ARHGAP40	ARHGAP40	NA	NA	NA	NA	ARHGAP40	1381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	37398577	37398739	37398665	Y	NA	ACTR5	NA	NA	NA	NA	ACTR5	23492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	37606792	37607147	37606919	Y	NA	DHX35	NA	NA	NA	NA	DHX35	17850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	37626282	37626666	37626585	Y	NA	DHX35	NA	NA	NA	NA	DHX35	37340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	37678805	37678873	37678867	Y	SLC32A1,PPP1R16B	NA	NA	NA	NA	NA	DHX35	89863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.250797490903309
chr20	39826598	39826945	39826630	Y	CHD6	NA	NA	NA	NA	NA	PLCG1	62998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	39958158	39958419	39958360	Y	NA	ZHX3,LPIN3,EMILIN3	PLCG1,ZHX3,LPIN3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LPIN3	9141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr20	40321359	40321668	40321514	Y	NA	NA	CHD6	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD6	76226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	41722600	41722750	41722675	Y	SGK2	NA	NA	NA	NA	NA	SRSF6	361818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	42137465	42137802	42137552	Y	NA	L3MBTL1,SGK2	NA	NA	NA	NA	L3MBTL1	3145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	42189975	42190335	42190153	Y	SGK2,SGK2	SGK2,IFT52	NA	NA	NA	NA	SGK2	4367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	42286061	42286420	42286177	Y	SRSF6,L3MBTL1,MYBL2	RPL27AP,MYBL2	MYBL2	IMR90	Hi-C	24141950	RPL27AP	6898	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.12301143691594
chr20	42938917	42939166	42938990	Y	NA	FITM2,HNF4A	GDAP1L1	IMR90	Hi-C	24141950	FITM2	1108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	42948601	42948866	42948737	Y	NA	FITM2,HNF4A	GDAP1L1,FITM2,C20orf111,LOC100505783,RIMS4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FITM2	10792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	42955373	42955435	42955404	Y	NA	FITM2,HNF4A	NA	NA	NA	NA	FITM2	17564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	42989238	42989527	42989524	Y	NA	HNF4A,HNF4A-AS1	NA	NA	NA	NA	HNF4A	6898	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.98074894580726
chr20	43021871	43022017	43021941	Y	HNF4A,HNF4A	HNF4A,HNF4A-AS1	NA	NA	NA	NA	HNF4A-AS1	329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.461825580316999
chr20	43023129	43023488	43023363	Y	HNF4A	HNF4A,HNF4A-AS1	NA	NA	NA	NA	HNF4A-AS1	783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391155133064253
chr20	43062949	43062981	43062965	Y	NA	HNF4A-AS1,RPL37AP1,TTPAL	NA	NA	NA	NA	RPL37AP1	30501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.342506554517358
chr20	43095875	43096132	43096006	Y	HNF4A,TTPAL	RPL37AP1,TTPAL	LOC79015,TTPAL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL37AP1	2393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	43123975	43124199	43124088	Y	C20orf111,STK4,ADA,SERINC3	RPL37AP1,TTPAL,SERINC3,PKIG	NA	NA	NA	NA	TTPAL	21449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	43181922	43182397	43182243	Y	SERINC3	SERINC3,PKIG	NA	NA	NA	NA	PKIG	23496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	43238683	43239068	43238831	Y	NA	ADA	NA	NA	NA	NA	ADA	39806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.443746519105721
chr20	43517782	43518230	43517943	Y	NA	YWHAB,PABPC1L	PABPC1L	IMR90	Hi-C	24141950	YWHAB	5465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr20	43540233	43540373	43540312	Y	DBNDD2,DBNDD2,DBNDD2,PABPC1L	YWHAB,PABPC1L,TOMM34	NA	NA	NA	NA	PABPC1L	3530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.902452446527931
chr20	43582253	43582415	43582335	Y	NA	PABPC1L,TOMM34,STK4	NA	NA	NA	NA	TOMM34	4712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr20	43598276	43598454	43598400	Y	SERINC3,ADA,SYS1,STK4	TOMM34,STK4	NA	NA	NA	NA	STK4	5161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	43689990	43690348	43690045	Y	NA	NA	NA	NA	NA	NA	STK4	96875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	43970100	43970351	43970215	Y	NA	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	4713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr20	43972131	43972359	43972259	Y	NA	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	2705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	43972821	43973151	43973055	Y	SYS1,SDC4	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	1913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr20	43974041	43974470	43974334	Y	NA	SDC4,SYS1,SYS1-DBNDD2	NA	NA	NA	NA	SDC4	594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	44001576	44001658	44001579	Y	WFDC11,KCNS1,TP53TG5,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2,DBNDD2	SDC4,SYS1,SYS1-DBNDD2,PIGT	NA	NA	NA	NA	SYS1-DBNDD2	11736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	44056635	44056652	44056644	Y	NA	PIGT,WFDC2	NA	NA	NA	NA	PIGT	13918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	44604057	44604097	44604095	Y	NA	PCIF1,ZNF335,SLC12A5	NA	NA	NA	NA	ZNF335	5224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr20	44627049	44627270	44627179	Y	PCIF1,CD40,ZNF335	ZNF335,SLC12A5	MMP9	MCF7	ChIA-PET	22265404	SLC12A5	21086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	44737653	44737771	44737721	Y	WFDC3,C20orf165	NCOA5,RPL13P2,CD40	SLC12A5,CD40	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CD40	7140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	45006307	45006609	45006393	Y	PCIF1,ZNF335	SLC35C2	NA	NA	NA	NA	SLC35C2	15264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr20	45028892	45029133	45029011	Y	CD40	SLC35C2,ELMO2	NA	NA	NA	NA	ELMO2	30571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	45180548	45180762	45180742	Y	CD40,C20orf123	ZNF334	NA	NA	NA	NA	ZNF334	40350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr20	45210571	45210900	45210742	Y	NA	NA	NA	NA	NA	NA	ZNF334	70373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	45251611	45251999	45251807	Y	NA	NA	NA	NA	NA	NA	SLC13A3	50715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr20	45257949	45258319	45258134	Y	NA	SLC13A3	NA	NA	NA	NA	SLC13A3	44395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	45260003	45260107	45260055	Y	NA	SLC13A3	NA	NA	NA	NA	SLC13A3	42607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.263619475455158
chr20	45266832	45266970	45266902	Y	NA	SLC13A3,TP53RK	NA	NA	NA	NA	SLC13A3	35744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	45825158	45825275	45825178	Y	NA	NA	NA	NA	NA	NA	RP5-1050K3.3	126654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	45870109	45870518	45870490	Y	ZMYND8,NCOA3	NA	NA	NA	NA	NA	ZMYND8	113049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.428627524651668
chr20	45943818	45944172	45944095	Y	NA	ZMYND8	NA	NA	NA	NA	ZMYND8	39395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	45946049	45946481	45946179	Y	NA	ZMYND8	NA	NA	NA	NA	ZMYND8	37086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	45960088	45960376	45960270	Y	ZMYND8	ZMYND8	NA	NA	NA	NA	ZMYND8	23191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr20	45962816	45963214	45963054	Y	NA	ZMYND8	NA	NA	NA	NA	ZMYND8	20353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	45987479	45988292	45987961	Y	NA	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	3912	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03606782378904
chr20	45988883	45989283	45988988	Y	SULF2	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	5316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	45989347	45989834	45989660	Y	SULF2	ZMYND8	ZMYND8,LOC100131496,NCOA3	IMR90	Hi-C	24141950	ZMYND8	5780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.761603178194713
chr20	46067997	46068157	46068096	Y	NCOA3	NA	NCOA3,ZMYND8	IMR90	Hi-C	24141950	NCOA3	60444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	46082300	46082410	46082355	Y	NA	NCOA3	NCOA3,ZMYND8	IMR90	Hi-C	24141950	NCOA3	46191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	46122337	46122452	46122395	Y	NA	NCOA3	NA	NA	NA	NA	NCOA3	6149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	46316176	46316372	46316269	Y	NA	NA	NA	NA	NA	NA	SULF2	96988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	46320177	46320280	46320230	Y	SULF2	NA	NA	NA	NA	NA	SULF2	93080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	46351193	46351379	46351286	Y	NA	NA	NA	NA	NA	NA	SULF2	61981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	46376142	46376447	46376278	Y	SULF2,SULF2	SULF2	NA	NA	NA	NA	SULF2	36913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	46924305	46924474	46924390	Y	NA	NA	SULF2,NCOA3,PREX1,ARFGEF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00494	62219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	47355645	47355720	47355673	Y	NA	NA	NA	NA	NA	NA	ARFGEF2	180707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	47544338	47544681	47544534	Y	DDX27	ARFGEF2	NA	NA	NA	NA	ARFGEF2	7911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	47547466	47547777	47547635	Y	ZNFX1,ARFGEF2	ARFGEF2	NA	NA	NA	NA	ARFGEF2	11039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	47750965	47751079	47750977	Y	ZNFX1	NA	NA	NA	NA	NA	STAU1	51825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221873259552861
chr20	47784409	47784640	47784548	Y	PREX1,ZNFX1	STAU1,DDX27	NA	NA	NA	NA	STAU1	18264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	47796581	47796870	47796726	Y	NA	STAU1,DDX27	NA	NA	NA	NA	STAU1	6034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	47803381	47804147	47803544	Y	PREX1,STAU1	STAU1,DDX27	NA	NA	NA	NA	STAU1	477	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.40403877335747
chr20	47893075	47893400	47893157	Y	B4GALT5,ZNFX1	ZNFX1,SNORD12B,SNORD12	NA	NA	NA	NA	ZNFX1	112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	48200728	48200848	48200788	Y	PTGIS	NA	ZNFX1-AS1,ZNFX1,SLC9A8,KCNB1,PTGIS,B4GALT5,SPATA2	IMR90	Hi-C	24141950	B4GALT5	127567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.490589713922685
chr20	48291121	48291501	48291391	Y	ZNFX1,SNAI1,SLC9A8,B4GALT5	B4GALT5	NA	NA	NA	NA	B4GALT5	36914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr20	48311078	48311758	48311363	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	16657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	48315836	48316073	48315912	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	12342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr20	48317219	48317517	48317348	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	10898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	48327368	48328064	48327696	Y	ZNFX1,TMEM189,SNAI1,SLC9A8,RNF114,CEBPB,B4GALT5	B4GALT5,SNRPFP1	NA	NA	NA	NA	B4GALT5	351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr20	48367008	48367399	48367310	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8	B4GALT5,SNRPFP1	B4GALT5	IMR90	Hi-C	24141950	SNRPFP1	22629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	48383666	48383949	48383788	Y	ZNFX1,B4GALT5,SNAI1,RNF114,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNRPFP1	39287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	48384741	48385230	48384965	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,RNF114,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNRPFP1	40362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr20	48385312	48385495	48385398	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNRPFP1	40933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	48388811	48389348	48388940	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1,SPATA2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC9A8	37902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.560437006575647
chr20	48391675	48392320	48391995	Y	ZNFX1,B4GALT5,TMEM189,SNAI1,CEBPB,SLC9A8	SNRPFP1,SLC9A8	B4GALT5,SLC9A8,KCNB1,SPATA2	IMR90	Hi-C	24141950	SLC9A8	34930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.618125371531781
chr20	48406938	48407203	48407095	Y	B4GALT5,SNAI1,SLC9A8	SLC9A8	KCNB1,B4GALT5,SLC9A8,SPATA2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SLC9A8	20047	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	48532841	48533167	48533004	Y	SPATA2,SPATA2	SPATA2,RNF114	NA	NA	NA	NA	SPATA2	2761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr20	48533898	48534043	48533948	Y	B4GALT5,SLC9A8,CEBPB,SPATA2,SNAI1,RNF114	SPATA2,RNF114	NA	NA	NA	NA	SPATA2	3818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.152517081464972
chr20	48644508	48644680	48644594	Y	B4GALT5,SLC9A8,SNAI1,TMEM189,PTPN1,CEBPB	SNAI1	TMEM189-UBE2V1,UBE2V1,SNAI1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SNAI1	46972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	48646361	48646933	48646559	Y	NA	SNAI1	TMEM189-UBE2V1,UBE2V1,SNAI1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SNAI1	48825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199520374026699
chr20	48650281	48650896	48650575	Y	NA	NA	TMEM189-UBE2V1,UBE2V1,SNAI1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNAI1	52745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	48707582	48707967	48707775	Y	NA	UBE2V1	NA	NA	NA	NA	UBE2V1	22529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	48717588	48717974	48717858	Y	NA	UBE2V1	NA	NA	NA	NA	UBE2V1	12522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	48753681	48754062	48753956	Y	B4GALT5,SLC9A8,RNF114,SNAI1,TMEM189,PTPN1,CEBPB	UBE2V1,TMEM189-UBE2V1,TMEM189,RP11-112L6.4	NA	NA	NA	NA	TMEM189-UBE2V1	14112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	48804007	48804349	48804187	Y	B4GALT5,SLC9A8,SPATA2,PTPN1,CEBPB	TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB	NA	NA	NA	NA	CEBPB	1027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.177498505320848
chr20	48809447	48810205	48810164	Y	B4GALT5,SPATA2,SPATA2,CEBPB	TMEM189-UBE2V1,TMEM189,RP11-112L6.4,CEBPB	NA	NA	NA	NA	CEBPB	4071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	48886266	48886638	48886571	Y	SLC9A8,RNF114,SNAI1,PTPN1,TMEM189,CEBPB	RP11-290F20.3	PARD6B,CEBPB,PTPN1,LOC284751,FAM65C,MIR645	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-290F20.3	4243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr20	48921857	48922230	48922089	Y	NA	RP11-290F20.3	NA	NA	NA	NA	RP11-290F20.3	39834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.986927619069873
chr20	48922474	48922671	48922573	Y	NA	RP11-290F20.3	NA	NA	NA	NA	RP11-290F20.3	40451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.301091867042572
chr20	48924890	48925591	48925260	Y	SLC9A8,RNF114,SNAI1,TMEM189,CEBPB,PTPN1	RP11-290F20.3	NA	NA	NA	NA	RP11-290F20.3	42867	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.8859288842755
chr20	48951795	48951969	48951898	Y	NA	NA	NA	NA	NA	NA	RP11-290F20.3	69772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	49032230	49032497	49032297	Y	NA	NA	LOC284751,CEBPB,TMEM189-UBE2V1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTPN1	92394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.269699195107171
chr20	49055532	49055924	49055757	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPN1	68967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr20	49057048	49057261	49057196	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPN1	67630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	49058248	49058472	49058381	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PTPN1	66419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.783133420728291
chr20	49068016	49068199	49068168	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C,MIR645,PARD6B	IMR90	Hi-C	24141950	PTPN1	56692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	49072488	49072605	49072528	Y	SNAI1,TMEM189,CEBPB,PTPN1	NA	LOC284751,CEBPB,TMEM189-UBE2V1,UBE2V1,PTPN1,FAM65C,MIR645,PARD6B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTPN1	52286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr20	49100027	49100544	49100221	Y	TMEM189,CEBPB,PTPN1	PTPN1	LOC284751,TMEM189-UBE2V1,MIR645,FAM65C,PTPN1,PARD6B,UBE2V1,SNAI1,CEBPB	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PTPN1	24347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.228284507632385
chr20	49134968	49135201	49135019	Y	TMEM189,CEBPB,PTPN1	PTPN1	NA	NA	NA	NA	PTPN1	10077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	49157621	49157908	49157761	Y	NA	PTPN1	NA	NA	NA	NA	PTPN1	32730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	49345638	49345902	49345710	Y	MOCS3,PARD6B	PARD6B	NA	NA	NA	NA	PARD6B	179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.227952979204874
chr20	49346260	49347200	49346344	Y	NA	PARD6B	NA	NA	NA	NA	PARD6B	179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr20	49350102	49350473	49350150	Y	NA	PARD6B	NA	NA	NA	NA	PARD6B	4021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	49358421	49358698	49358635	Y	NA	PARD6B	NA	NA	NA	NA	PARD6B	12340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	49378305	49378754	49378413	Y	DPM1,PARD6B,BCAS4	PARD6B,BCAS4	NA	NA	NA	NA	BCAS4	30677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.966712157308351
chr20	49407275	49407470	49407371	Y	MOCS3	BCAS4	ZMYND8,BCAS4,ADNP,LOC100131496,FAM65C,NCOA3	MCF7,K562	ChIA-PET	22265404	BCAS4	1961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.428135898479395
chr20	49487134	49487591	49487436	Y	NA	NA	NA	NA	NA	NA	RP5-914P20.5	57930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr20	49516325	49516426	49516399	Y	ADNP	RP5-914P20.5,ADNP	NA	NA	NA	NA	RP5-914P20.5	29095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	49524499	49524706	49524614	Y	ADNP	RP5-914P20.5,ADNP,DPM1,MOCS3	NA	NA	NA	NA	RP5-914P20.5	20815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	49539044	49539098	49539071	Y	NA	RP5-914P20.5,ADNP,DPM1,MOCS3	NA	NA	NA	NA	RP5-914P20.5	6423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr20	49574418	49574471	49574465	Y	PTPN1,ADNP	RP5-914P20.5,ADNP,DPM1,MOCS3	NA	NA	NA	NA	MOCS3	1055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr20	50027410	50027791	50027676	Y	NA	NA	NA	NA	NA	NA	NFATC2	149579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	50040722	50041122	50041004	Y	NA	NA	NA	NA	NA	NA	NFATC2	136248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	50054102	50054305	50054204	Y	NA	NA	NA	NA	NA	NA	NFATC2	123065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	50072988	50073809	50073517	Y	NA	NA	NA	NA	NA	NA	NFATC2	103561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	50100584	50100753	50100686	Y	NFATC2	NA	NA	NA	NA	NA	NFATC2	76617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	50145650	50145911	50145725	Y	NA	NFATC2	NA	NA	NA	NA	NFATC2	31459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	50149435	50150104	50149627	Y	NFATC2	NFATC2	NA	NA	NA	NA	NFATC2	27266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	50361169	50361338	50361278	Y	NA	RP5-827A12.2,ATP9A	NA	NA	NA	NA	RP5-827A12.2	12097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	50366772	50367203	50366881	Y	ZFP64,ATP9A	RP5-827A12.2,ATP9A,SALL4	NA	NA	NA	NA	ATP9A	15970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.371270688123044
chr20	50383575	50384083	50383723	Y	ATP9A	RP5-827A12.2,ATP9A,SALL4	NA	NA	NA	NA	ATP9A	402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.281698536666436
chr20	50416861	50417288	50417180	Y	ZFP64,SALL4	ATP9A	NA	NA	NA	NA	SALL4	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	51694232	51694450	51694303	Y	TSHZ2	NA	NA	NA	NA	NA	TSHZ2	107286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	52195343	52195714	52195527	Y	ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	28732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr20	52195908	52196455	52196142	Y	ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	27991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr20	52196593	52196861	52196746	Y	TSHZ2,ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	27585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	52201463	52201802	52201714	Y	ZNF217	ZNF217	NA	NA	NA	NA	ZNF217	22644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.787898871215447
chr20	52212842	52213180	52212942	Y	ZNF217	ZNF217	BMP7,SUMO1P1,BCAS1,CYP24A1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZNF217	11266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr20	52213211	52213282	52213247	Y	NA	ZNF217	BMP7,SUMO1P1,BCAS1,CYP24A1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZNF217	11164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr20	52238141	52238435	52238216	Y	ZNF217	ZNF217	SUMO1P1,BMP7,ZNF217,BCAS1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF217	13695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	52239995	52240318	52240062	Y	ZNF217	ZNF217	SUMO1P1,BMP7,BCAS1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF217	15549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.585418430431523
chr20	52268867	52269118	52269044	Y	ZNF217	ZNF217	SUMO1P1,BCAS1	IMR90	Hi-C	24141950	ZNF217	44421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.775899529656182
chr20	52294676	52294905	52294769	Y	NA	NA	BMP7,SUMO1P1,BCAS1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZNF217	70230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.825862377367935
chr20	52355086	52355238	52355182	Y	NA	NA	ZNF217,BCAS1	IMR90	Hi-C	24141950	ZNF217	130640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.488452801765243
chr20	52356771	52357178	52357063	Y	ZNF217	NA	ZNF217,BCAS1	IMR90	Hi-C	24141950	ZNF217	132325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	52364781	52365137	52364834	Y	NA	NA	ZNF217,BCAS1,SUMO1P1,BMP7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SUMO1P1	124959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	52380425	52380741	52380578	Y	NA	NA	ZNF217,BCAS1,SUMO1P1	IMR90	Hi-C	24141950	SUMO1P1	109355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.689778559521873
chr20	52390351	52390640	52390407	Y	NA	NA	ZNF217,BCAS1,SUMO1P1	IMR90	Hi-C	24141950	SUMO1P1	99456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	52446362	52446831	52446771	Y	ZNF217	SUMO1P1	ZNF217,BCAS1,BMP7,SUMO1P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SUMO1P1	43265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr20	52482655	52483054	52482957	Y	NA	SUMO1P1	NA	NA	NA	NA	SUMO1P1	7042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr20	52532315	52532889	52532591	Y	ZNF217	SUMO1P1	SUMO1P1,BMP7,ZNF217	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SUMO1P1	42219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	52543055	52543571	52543250	Y	ZNF217	NA	NA	NA	NA	NA	SUMO1P1	52959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	52570477	52570680	52570623	Y	NA	NA	NA	NA	NA	NA	SUMO1P1	80381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	52726626	52726868	52726743	Y	CYP24A1	BCAS1	CYP24A1,DOK5	IMR90	Hi-C	24141950	BCAS1	41322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr20	52730221	52730319	52730270	Y	NA	BCAS1	CYP24A1,DOK5,BMP7,SULF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCAS1	44917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	52732445	52732648	52732547	Y	NA	BCAS1	CYP24A1,DOK5,BMP7,SULF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCAS1	47141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.191303742217244
chr20	52738263	52738706	52738357	Y	NA	CYP24A1	DOK5,SULF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CYP24A1	49806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	52738821	52739082	52738998	Y	NA	CYP24A1	DOK5,SULF2,ZMYND8,BMP7	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CYP24A1	49430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	52740107	52740637	52740253	Y	NA	CYP24A1	DOK5,SULF2,ZMYND8,BMP7,PTPRT	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CYP24A1	47875	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.20592194391474
chr20	52749215	52749597	52749386	Y	NA	CYP24A1	DOK5	IMR90	Hi-C	24141950	CYP24A1	38915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.484670092015434
chr20	52749873	52750284	52750109	Y	NA	CYP24A1	NA	NA	NA	NA	CYP24A1	38228	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.08371316207632
chr20	52757453	52757742	52757598	Y	NA	CYP24A1	NA	NA	NA	NA	CYP24A1	30770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	52784442	52785020	52784595	Y	PFDN4	CYP24A1,PFDN4	NA	NA	NA	NA	CYP24A1	3492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	52811815	52812290	52812012	Y	NA	CYP24A1,PFDN4	SULF2,DOK5,BCAS1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PFDN4	10096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr20	52812299	52812959	52812479	Y	NA	CYP24A1,PFDN4	SULF2,DOK5,BCAS1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PFDN4	9427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr20	52831217	52831490	52831439	Y	NA	CYP24A1,PFDN4	NA	NA	NA	NA	PFDN4	8831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	53116440	53116542	53116504	Y	DOK5	NA	NA	NA	NA	NA	PFDN4	294054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	54997703	54998108	54997901	Y	NA	AURKA,CSTF1,CASS4	NA	NA	NA	NA	CASS4	12535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	55964119	55964506	55964297	Y	ZBP1,MTRNR2L3,RBM38	RAE1,MTRNR2L3	NA	NA	NA	NA	RBM38	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr20	55973445	55973831	55973580	Y	RBM38,ZBP1,PMEPA1	RAE1,MTRNR2L3,RBM38	NA	NA	NA	NA	RBM38	8982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	55976268	55976716	55976350	Y	RBM38,ZBP1,PMEPA1	MTRNR2L3,RBM38	NA	NA	NA	NA	RBM38	11805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	56010646	56011025	56010972	Y	NA	RBM38	NA	NA	NA	NA	RBM38	46183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	56016094	56016430	56016231	Y	NA	HMGB1P1	NA	NA	NA	NA	HMGB1P1	45653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	56032255	56032633	56032497	Y	NA	HMGB1P1	MIR5095,CTCFL	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HMGB1P1	29450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	56592321	56592469	56592395	Y	PMEPA1,PMEPA1	NA	ZBP1	IMR90	Hi-C	24141950	PPP4R1L	290026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	56983736	56983744	56983737	Y	NA	VAPB	NA	NA	NA	NA	VAPB	21558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	57018014	57018479	57018179	Y	STX16	NA	NA	NA	NA	NA	VAPB	55836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	57198784	57199334	57199089	Y	NA	STX16,STX16-NPEPL1	NA	NA	NA	NA	STX16	24994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	57228113	57228577	57228221	Y	NA	STX16,STX16-NPEPL1	NA	NA	NA	NA	STX16-NPEPL1	3623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	57557787	57558211	57558054	Y	ZNF831,STX16	ATP5E	NA	NA	NA	NA	ATP5E	47226	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr20	57579440	57580501	57580194	Y	NA	ATP5E,SLMO2	NA	NA	NA	NA	ATP5E	24936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	57585788	57586041	57585915	Y	NA	ATP5E,SLMO2	NA	NA	NA	NA	ATP5E	19396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr20	57984055	57984410	57984233	Y	NA	NA	NA	NA	NA	NA	PHACTR3	166154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	60719468	60719634	60719593	Y	SS18L1,GTPBP5	LSM14B,PSMA7,SS18L1	NA	NA	NA	NA	SS18L1	2646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341192285352501
chr20	60803093	60803442	60803179	Y	NA	HRH3,OSBPL2	NA	NA	NA	NA	OSBPL2	8138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr20	60924549	60924827	60924688	Y	TAF4,SS18L1,SLCO4A1,C20orf151,LAMA5	ADRM1,MIR4758,LAMA5,RPS21	NA	NA	NA	NA	LAMA5	15541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr20	60934143	60934390	60934309	Y	TAF4,PSMA7,SS18L1,RPS21,NTSR1,CABLES2,C20orf20,C20orf151,ADRM1,LAMA5	MIR4758,LAMA5,RPS21,CABLES2	ADRM1	K562	ChIA-PET	22265404	LAMA5	5978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	60940876	60941209	60940968	Y	PSMA7,SLCO4A1,RPS21,NTSR1,C20orf20,C20orf151,ADRM1,LAMA5	MIR4758,LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	60941528	60941750	60941608	Y	SLCO4A1,ADRM1,LAMA5	MIR4758,LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	1160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr20	60943690	60943839	60943760	Y	NA	MIR4758,LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	3322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.627165157941019
chr20	60944265	60944566	60944463	Y	NA	MIR4758,LAMA5,RPS21,CABLES2	NA	NA	NA	NA	LAMA5	3897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	60956313	60956720	60956445	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	RPS21	3452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	60956743	60957219	60956871	Y	NA	LAMA5,RPS21,CABLES2	NA	NA	NA	NA	RPS21	2953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr20	61267975	61268016	61267996	Y	NA	SLCO4A1,RP11-93B14.5	NA	NA	NA	NA	SLCO4A1	3781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	61282674	61283033	61282738	Y	OSBPL2,DPH3P1,OGFR,DIDO1	SLCO4A1,RP11-93B14.5	NA	NA	NA	NA	SLCO4A1	10877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr20	61283206	61283870	61283565	Y	OSBPL2,DPH3P1,OGFR,DIDO1	SLCO4A1,RP11-93B14.5	NA	NA	NA	NA	SLCO4A1	11409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr20	61371030	61371150	61371083	Y	DPH3P1,DIDO1,OGFR	NA	NA	NA	NA	NA	OGFR	63037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr20	61371540	61371927	61371747	Y	DPH3P1,DIDO1,OGFR	NA	NA	NA	NA	NA	OGFR	62260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	61425509	61425950	61425706	Y	DPH3P1,DIDO1,OGFR	OGFR,OGFR-AS1,COL9A3	NA	NA	NA	NA	OGFR	8237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.514416966358467
chr20	61505589	61505880	61505712	Y	BHLHE23,DIDO1,C20orf11	TCFL5	TCFL5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TCFL5	14474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr20	61506279	61506510	61506352	Y	BHLHE23,TCFL5,DIDO1,C20orf11	TCFL5	TCFL5	MCF7,K562	ChIA-PET	22265404	TCFL5	15164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr20	61553883	61554120	61553955	Y	DIDO1	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	13184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	61554875	61554902	61554887	Y	DIDO1	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	12402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	61555881	61556606	61556058	Y	DIDO1	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	10698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chr20	61560348	61560848	61560731	Y	NA	DIDO1,SLC17A9	NA	NA	NA	NA	DIDO1	6456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	61585167	61585546	61585389	Y	NA	DIDO1,SLC17A9	NA	NA	NA	NA	SLC17A9	3115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr20	61585554	61585775	61585703	Y	SLC17A9	DIDO1,SLC17A9	NA	NA	NA	NA	SLC17A9	3502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.390332490071669
chr20	61687989	61688195	61688101	Y	NA	NA	NA	NA	NA	NA	SLC17A9	105937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	61806793	61806933	61806887	Y	STMN3,KCNQ2,EEF1A2,COL20A1,CHRNA4	YTHDF1	NA	NA	NA	NA	YTHDF1	38653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	61903396	61903541	61903451	Y	NKAIN4	BIRC7,ARFGAP1	NA	NA	NA	NA	ARFGAP1	1259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr20	62243705	62243960	62243817	Y	TPD52L2,RGS19,RGS19,OPRL1,PRIC285,PRIC285,GMEB2	GMEB2,CTD-3184A7.4,STMN3,RTEL1	NA	NA	NA	NA	GMEB2	12434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr20	62285983	62286092	62286038	Y	NA	GMEB2,CTD-3184A7.4,STMN3,RTEL1,TNFRSF6B	NA	NA	NA	NA	RTEL1	1071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr20	62478016	62478296	62478069	Y	NA	ZBTB46,TPD52L2,DNAJC5	NA	NA	NA	NA	TPD52L2	16300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr20	62494990	62495823	62495679	Y	NA	ZBTB46,TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	TPD52L2	394	CAGE	HepG2 ENCODE	hg19	FANTOM5	9.04718570174982
chr20	62527317	62528264	62527831	Y	PRIC285,PRIC285,GMEB2,ZGPAT,ZGPAT,LIME1,TPD52L2,RGS19,RGS19,OPRL1,DNAJC5	TPD52L2,DNAJC5,RNU1-134P	NA	NA	NA	NA	DNAJC5	2799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr20	62609214	62609358	62609321	Y	SAMD10	UCKL1,SAMD10,PRPF6	NA	NA	NA	NA	SAMD10	3	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr20	62683158	62683348	62683288	Y	NA	LINC00176,ZNF512B,SOX18,TCEA2,RGS19	NA	NA	NA	NA	TCEA2	3969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	62685313	62685625	62685427	Y	UCKL1,SOX18,TCEA2	LINC00176,ZNF512B,SOX18,TCEA2,RGS19	NA	NA	NA	NA	TCEA2	6124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.767351369419216
chr20	62687331	62687588	62687453	Y	SOX18,TCEA2	LINC00176,ZNF512B,SOX18,TCEA2,RGS19	NA	NA	NA	NA	TCEA2	8142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr20	62709200	62709458	62709264	Y	GMEB2,ZGPAT,LIME1,PCMTD2,RGS19,RGS19,OPRL1	LINC00176,ZNF512B,SOX18,TCEA2	NA	NA	NA	NA	RGS19	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr20	62820558	62820833	62820696	Y	NA	NA	NA	NA	NA	NA	PCMTD2	64261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.337249477857929
chr20	62887659	62888425	62887862	Y	SAMD10,PCMTD2	PCMTD2	NA	NA	NA	NA	PCMTD2	2565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr21	9881917	9882087	9882000	Y	NA	NA	NA	NA	NA	NA	MIR3648	58085	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr21	15442714	15442952	15442833	Y	NA	AP001347.6	NA	NA	NA	NA	AP001347.6	44972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	15449757	15449894	15449826	Y	NA	NA	NA	NA	NA	NA	AP001347.6	52015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	15450488	15450803	15450511	Y	NA	NA	NA	NA	NA	NA	AP001347.6	52746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	16129964	16130277	16130229	Y	NA	NA	NA	NA	NA	NA	NRIP1	305044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	16235978	16236341	16236284	Y	SAMSN1,NRIP1	NA	NRIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NRIP1	198980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr21	16251857	16252256	16251994	Y	SAMSN1,NRIP1	NA	NRIP1	IMR90	Hi-C	24141950	NRIP1	183065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	16288603	16288806	16288642	Y	NA	NA	NRIP1	IMR90	Hi-C	24141950	NRIP1	146515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	16345757	16346184	16346094	Y	NA	NA	NA	NA	NA	NA	NRIP1	89137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	16354668	16355055	16354876	Y	NA	NA	NA	NA	NA	NA	NRIP1	80266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	16368229	16368687	16368553	Y	NRIP1	NA	NA	NA	NA	NA	NRIP1	66634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr21	16431175	16431558	16431528	Y	NA	NRIP1	NA	NA	NA	NA	NRIP1	3763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	16435480	16435873	16435862	Y	NRIP1	NRIP1	NA	NA	NA	NA	NRIP1	159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.155145619794687
chr21	16662871	16663259	16663022	Y	NA	NA	SAMSN1,NRIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NRIP1	227550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	16886196	16886753	16886663	Y	NA	NA	NA	NA	NA	NA	USP25	213591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	17103695	17103792	17103750	Y	USP25	USP25	NA	NA	NA	NA	USP25	3351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr21	17104761	17105053	17104812	Y	USP25	USP25	NA	NA	NA	NA	USP25	4417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	17264124	17264427	17264344	Y	NA	NA	NA	NA	NA	NA	USP25	163780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	18147470	18147769	18147614	Y	NA	NA	NA	NA	NA	NA	SNORD74	492381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	18886111	18886899	18886569	Y	NA	CXADR	NA	NA	NA	NA	CXADR	3411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr21	18891260	18891546	18891459	Y	NA	CXADR	NA	NA	NA	NA	CXADR	8560	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr21	18984370	18984546	18984496	Y	NA	BTG3	NA	NA	NA	NA	BTG3	1105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	19156522	19156877	19156578	Y	BTG3,C21orf91	C21orf91	NA	NA	NA	NA	C21orf91	32826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	19171826	19171995	19171943	Y	C21orf91	C21orf91	NA	NA	NA	NA	C21orf91	17708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	22545026	22545343	22545185	Y	NA	NA	NA	NA	NA	NA	TUBAP	2234105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	26882215	26882658	26882608	Y	NA	NA	NA	NA	NA	NA	MRPL39	95171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	26952057	26952278	26952105	Y	JAM2	MRPL39	NA	NA	NA	NA	MRPL39	25551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.529044846247446
chr21	26952450	26952820	26952600	Y	NA	MRPL39	NA	NA	NA	NA	MRPL39	25009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	26956680	26957339	26957242	Y	NA	MRPL39	NA	NA	NA	NA	MRPL39	20490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr21	26962945	26963646	26963455	Y	NA	MRPL39	NA	NA	NA	NA	MRPL39	14183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.3794873199325
chr21	26980548	26980842	26980671	Y	NA	MRPL39	NA	NA	NA	NA	MRPL39	2719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	27275894	27276232	27276045	Y	NA	NA	NA	NA	NA	NA	ATP5J	169910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	27370700	27370785	27370725	Y	NA	NA	NA	NA	NA	NA	APP	170661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr21	29656574	29656747	29656720	Y	NA	NA	ADAMTS1,ADAMTS5	IMR90	Hi-C	24141950	N6AMT1	598946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	30374865	30375265	30375125	Y	C21orf7,N6AMT1,LTN1,USP16	LTN1,RPL23P2,RWDD2B,USP16	LTN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RPL23P2	6511	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.15102323824748
chr21	30390843	30391016	30390919	Y	NA	LTN1,RPL23P2,RWDD2B,USP16	NA	NA	NA	NA	RWDD2B	1144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr21	30567218	30567411	30567380	Y	USP16,BACH1,BACH1	U3,BACH1	NA	NA	NA	NA	BACH1	2826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	30669074	30669451	30669267	Y	BACH1,BACH1	NA	NA	NA	NA	NA	BACH1	104682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	30751100	30751464	30751308	Y	NA	NA	NA	NA	NA	NA	BACH1	186708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	30754427	30754628	30754578	Y	NA	NA	NA	NA	NA	NA	BACH1	190035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr21	33104933	33105321	33105127	Y	NA	SCAF4	NA	NA	NA	NA	SCAF4	2545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	33105563	33105881	33105775	Y	SCAF4	SCAF4	NA	NA	NA	NA	SCAF4	3175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	33303378	33303399	33303389	Y	NA	NA	NA	NA	NA	NA	HUNK	59750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	33670455	33670601	33670551	Y	NA	MIS18A,MRAP	NA	NA	NA	NA	MRAP	8331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	34431694	34432299	34432033	Y	SON,IL10RB,IFNGR2,IFNAR1,GART,GART,SYNJ1,SYNJ1,IFNAR2,OLIG1	NA	OLIG1	IMR90	Hi-C	24141950	IFNAR2	167907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	34576237	34576546	34576341	Y	SON,IL10RB,IFNGR2,IFNAR1,GART,GART,SYNJ1,SYNJ1,IFNAR2	IFNAR2	IL10RB,TMEM50B,IFNAR1,IFNGR2,IFNAR2,LOC100288432	IMR90	Hi-C	24141950	IFNAR2	23660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr21	34659541	34659728	34659635	Y	NA	IL10RB,IFNAR1	NA	NA	NA	NA	IL10RB	22878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	34718616	34718973	34718794	Y	OLIG2,OLIG1	IFNAR1	NA	NA	NA	NA	IFNAR1	23882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	34733678	34734189	34733958	Y	OLIG1,IFNAR2,IL10RB,IFNAR1,SON,IFNGR2,GART,GART	IFNAR1,IFNGR2	NA	NA	NA	NA	IFNAR1	38944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	34752926	34753284	34753094	Y	IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2	IFNGR2	NA	NA	NA	NA	IFNGR2	19918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr21	34755296	34756154	34755534	Y	IFNAR2,IL10RB,IFNAR1,SON,GART,GART,IFNGR2	IFNGR2	IFNGR2	MCF7	ChIA-PET	22265404	IFNGR2	17048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr21	34818143	34818502	34818323	Y	OLIG2,OLIG1	IFNGR2,TMEM50B,DNAJC28	NA	NA	NA	NA	TMEM50B	31816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	34836293	34836479	34836379	Y	OLIG2,OLIG1,CRYZL1,TMEM50B	TMEM50B,DNAJC28	NA	NA	NA	NA	TMEM50B	13839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	35057919	35058071	35057938	Y	NA	ITSN1,CRYZL1	NA	NA	NA	NA	CRYZL1	43687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr21	35099909	35100119	35099917	Y	NA	NA	NA	NA	NA	NA	CRYZL1	85677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	35319562	35320491	35320153	Y	NA	ATP5O	NA	NA	NA	NA	ATP5O	33278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	35574029	35574459	35574413	Y	NA	NA	NA	NA	NA	NA	SLC5A3	130159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr21	35917479	35917977	35917777	Y	KCNE1,RUNX1	NA	NA	NA	NA	NA	RCAN1	67464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr21	36143971	36144119	36144107	Y	NA	NA	NA	NA	NA	NA	RCAN1	158530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr21	36181032	36181199	36181134	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	195591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	36208387	36209191	36208566	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	222946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr21	36214787	36216208	36215152	Y	NA	NA	NA	NA	NA	NA	RCAN1	229346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	36219873	36220239	36220187	Y	NA	NA	NA	NA	NA	NA	RCAN1	234432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	36220749	36221095	36220890	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	235308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	36222572	36222954	36222768	Y	NA	NA	NA	NA	NA	NA	RCAN1	237131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	36227422	36227493	36227482	Y	NA	NA	NA	NA	NA	NA	RCAN1	241981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	36234553	36234896	36234857	Y	NA	NA	NA	NA	NA	NA	RCAN1	249112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	36257911	36258724	36258067	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	272470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	36263020	36263336	36263172	Y	RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	277579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	36341048	36341379	36341195	Y	KCNE1,RUNX1,RUNX1	NA	NA	NA	NA	NA	RCAN1	355607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	36475401	36475555	36475452	Y	NA	NA	RUNX1,SETD4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RCAN1	489960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	36638663	36638676	36638670	Y	NA	NA	RUNX1	MCF7	ChIA-PET	22265404	RCAN1	653222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	37485408	37485566	37485491	Y	NA	CBR1,SETD4,DOPEY2	NA	NA	NA	NA	SETD4	35721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr21	37486095	37486219	37486157	Y	NA	CBR1,SETD4,DOPEY2	NA	NA	NA	NA	SETD4	36408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr21	37695369	37695803	37695437	Y	MORC3	MORC3	NA	NA	NA	NA	MORC3	4882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	37712607	37712952	37712729	Y	NA	MORC3,CHAF1B	NA	NA	NA	NA	MORC3	22120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr21	37850474	37850838	37850572	Y	NA	NA	NA	NA	NA	NA	CHAF1B	94798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	38072912	38073314	38073050	Y	SIM2	SIM2	HLCS	IMR90	Hi-C	24141950	SIM2	3479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr21	38232574	38232719	38232637	Y	NA	NA	NA	NA	NA	NA	AP000704.5	104093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr21	38349168	38349478	38349323	Y	TTC3,DYRK1A,HLCS	AP000704.5,HLCS	NA	NA	NA	NA	HLCS	11058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	38623241	38623485	38623453	Y	NA	DSCR9,AP001432.14,DSCR3	NA	NA	NA	NA	DSCR3	14777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	38629602	38630247	38630025	Y	NA	AP001432.14,DSCR3	NA	NA	NA	NA	DSCR3	8015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr21	38630405	38630786	38630710	Y	DYRK1A,DYRK1A	AP001432.14,DSCR3	NA	NA	NA	NA	DSCR3	7476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.996790048471697
chr21	38801876	38802213	38802018	Y	DYRK1A,DYRK1A,DYRK1A,DYRK1A	NA	NA	NA	NA	NA	DYRK1A	65784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr21	40159439	40159794	40159507	Y	NA	ETS2	ETS2,LINC00114	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ETS2	15437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.627656272506093
chr21	40225341	40225561	40225501	Y	ETS2	NA	LINC00114,ETS2,PSMG1,BRWD1	IMR90	Hi-C	24141950	ETS2	50110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	40277371	40277733	40277541	Y	NA	NA	ETS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ETS2	102140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	40278958	40279421	40279192	Y	NA	NA	ETS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ETS2	103727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	40331056	40331378	40331206	Y	NA	NA	ETS2,LINC00114,PSMG1	IMR90	Hi-C	24141950	ETS2	155825	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.08307060474357
chr21	40338093	40338255	40338153	Y	NA	NA	ETS2,LINC00114,PSMG1	IMR90	Hi-C	24141950	ETS2	162862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.857094951558572
chr21	40388041	40388127	40388084	Y	ETS2	NA	ETS2,LINC00114	IMR90	Hi-C	24141950	PSMG1	165650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	40393264	40393350	40393326	Y	NA	NA	ETS2,LINC00114	IMR90	Hi-C	24141950	PSMG1	160427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	40451581	40451961	40451677	Y	ETS2	NA	ETS2,LINC00114	IMR90	Hi-C	24141950	PSMG1	101816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	40455445	40455742	40455689	Y	ETS2	NA	ETS2	IMR90	Hi-C	24141950	PSMG1	98035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr21	40466991	40467348	40467127	Y	ETS2	NA	ETS2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PSMG1	86429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr21	40477146	40477494	40477374	Y	ETS2	NA	ETS2,LINC00114,ERG	IMR90	Hi-C	24141950	PSMG1	76283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr21	40673787	40673929	40673891	Y	NA	BRWD1,HMGN1	NA	NA	NA	NA	BRWD1	17556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr21	40690087	40690386	40690238	Y	NA	BRWD1,HMGN1	NA	NA	NA	NA	BRWD1	1099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	40716228	40716377	40716303	Y	NA	BRWD1,HMGN1,WRB	NA	NA	NA	NA	HMGN1	3196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	40753076	40753485	40753292	Y	WRB	HMGN1,WRB	NA	NA	NA	NA	WRB	2906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	41048329	41048488	41048408	Y	SH3BGR	NA	NA	NA	NA	NA	PCP4	188755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	42520565	42520766	42520690	Y	BACE2	NA	NA	NA	NA	NA	FAM3B	153373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	42693256	42693286	42693271	Y	NA	FAM3B,MX2	NA	NA	NA	NA	FAM3B	19117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr21	43183711	43183960	43183836	Y	RIPK4	RIPK4	NA	NA	NA	NA	RIPK4	1306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	43188787	43189188	43188843	Y	RIPK4	RIPK4	NA	NA	NA	NA	RIPK4	3521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	43431472	43431831	43431677	Y	NA	UMODL1	NA	NA	NA	NA	UMODL1	49237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr21	43654635	43655282	43654967	Y	NA	ABCG1	TFF3	IMR90	Hi-C	24141950	ABCG1	36836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	44074543	44074777	44074593	Y	NA	PDE9A	NA	NA	NA	NA	PDE9A	2797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	44278308	44278654	44278481	Y	NA	WDR4,NDUFV3	NA	NA	NA	NA	WDR4	19024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	44395482	44395891	44395810	Y	NA	PKNOX1	NA	NA	NA	NA	PKNOX1	2862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30421151993736
chr21	44395922	44396228	44396080	Y	WDR4,U2AF1,CBS	PKNOX1	NA	NA	NA	NA	PKNOX1	3302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr21	44499901	44500036	44499938	Y	NA	CBS,U2AF1	NA	NA	NA	NA	CBS	4848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.574733869644315
chr21	44529146	44529448	44529286	Y	U2AF1	CBS,U2AF1	NA	NA	NA	NA	U2AF1	3449	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.45910725496097
chr21	44582937	44583304	44583126	Y	NA	CRYAA	HSF2BP,LINC00313,U2AF1	IMR90	Hi-C	24141950	CRYAA	3814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr21	44585027	44585202	44585153	Y	NA	CRYAA	NA	NA	NA	NA	CRYAA	1916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	44597156	44597534	44597315	Y	SIK1	CRYAA	NA	NA	NA	NA	CRYAA	10038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.45278630551496
chr21	44599156	44599262	44599209	Y	NA	CRYAA	NA	NA	NA	NA	CRYAA	12038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr21	44614192	44614410	44614235	Y	NA	CRYAA	HSF2BP,LINC00313,SIK1	IMR90	Hi-C	24141950	CRYAA	27074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr21	44631329	44631684	44631488	Y	NA	CRYAA	LINC00313,SIK1,HSF2BP,LINC00319	IMR90	Hi-C	24141950	CRYAA	44211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr21	44753292	44753457	44753456	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	91551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr21	44760713	44760913	44760830	Y	NA	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	84095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	44765825	44766380	44766074	Y	PKNOX1	NA	LINC00313,HSF2BP,SIK1,LINC00319	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SIK1	78628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr21	44816664	44817004	44816885	Y	NA	SIK1	NA	NA	NA	NA	SIK1	28004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.936142128365535
chr21	44817742	44818046	44817914	Y	NA	SIK1	NA	NA	NA	NA	SIK1	26962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	44831131	44831382	44831257	Y	NA	SIK1	NA	NA	NA	NA	SIK1	13626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	44848808	44849083	44848957	Y	CBS	SIK1,LINC00313	NA	NA	NA	NA	SIK1	3800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	44850435	44851222	44850996	Y	CBS	SIK1,LINC00313	CRYAA,SIK1,HSF2BP,LINC00313,LINC00319,RRP1B	IMR90	Hi-C	24141950	SIK1	5427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	44859375	44859527	44859442	Y	NA	SIK1,LINC00313	NA	NA	NA	NA	SIK1	14367	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.42417310306976
chr21	44860778	44861412	44860950	Y	SIK1	SIK1,LINC00313	NA	NA	NA	NA	SIK1	15770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.906395254022503
chr21	44874156	44874417	44874299	Y	NA	SIK1,LINC00313	NA	NA	NA	NA	LINC00313	22997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	44914466	44914931	44914660	Y	PDXK,U2AF1,SIK1	LINC00313	CRYAA,SIK1,HSF2BP,RRP1B,LINC00313	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00313	17052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr21	44936784	44937143	44936907	Y	PDXK	LINC00313	NA	NA	NA	NA	LINC00313	39370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr21	44937659	44937875	44937741	Y	PDXK	LINC00313	NA	NA	NA	NA	LINC00313	40245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr21	44937921	44938237	44938215	Y	NA	LINC00313	NA	NA	NA	NA	LINC00313	40507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	44939768	44940090	44939875	Y	PDXK	LINC00313	NA	NA	NA	NA	LINC00313	42354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr21	45029471	45029828	45029593	Y	PDXK	HSF2BP,RRP1B	NA	NA	NA	NA	HSF2BP	47546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.178812774485706
chr21	45080522	45080871	45080626	Y	TRAPPC10,PWP2,SIK1,RRP1B	HSF2BP,RRP1B	NA	NA	NA	NA	RRP1B	3093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr21	45132062	45132504	45132250	Y	HSF2BP,PDXK	PDXK	NA	NA	NA	NA	PDXK	4471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	45146832	45147391	45147298	Y	NA	PDXK,CSTB	NA	NA	NA	NA	PDXK	9857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr21	45198694	45199238	45199184	Y	NA	CSTB,RRP1	NA	NA	NA	NA	CSTB	4368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr21	45203235	45203378	45203292	Y	NA	CSTB,RRP1	CSTB	MCF7	ChIA-PET	22265404	RRP1	4016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341192285352501
chr21	45359018	45359208	45359125	Y	ICOSLG,C21orf2,TRAPPC10	NA	NA	NA	NA	NA	TRAPPC10	70992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr21	45394155	45394780	45394371	Y	AGPAT3,TRPM2,C21orf33	TRAPPC10	NA	NA	NA	NA	TRAPPC10	35420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	45441566	45441868	45441701	Y	C21orf2,TRAPPC10	TRAPPC10,H2AFZP1	PWP2,C21orf33	IMR90	Hi-C	24141950	TRAPPC10	11366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	45485183	45485767	45485497	Y	TRAPPC10,C21orf2	H2AFZP1,PWP2	NA	NA	NA	NA	H2AFZP1	20261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	45557942	45558217	45558021	Y	AGPAT3,TRAPPC10,TRPM2,ICOSLG,C21orf2	PWP2,C21orf33,AP001055.6	NA	NA	NA	NA	C21orf33	6455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	45558236	45558599	45558477	Y	PDXK,AGPAT3,TRAPPC10,TRPM2,ICOSLG	PWP2,C21orf33,AP001055.6	NA	NA	NA	NA	C21orf33	6749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	45566076	45566451	45566257	Y	TRAPPC10,ICOSLG,C21orf2	PWP2,C21orf33,AP001055.6	NA	NA	NA	NA	AP001055.6	11508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	45663780	45664167	45664129	Y	TRAPPC10,PWP2,C21orf2,ICOSLG	ICOSLG	NA	NA	NA	NA	ICOSLG	4931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	45790273	45790500	45790387	Y	TRAPPC10,ICOSLG,TRPM2	C21orf2	NA	NA	NA	NA	C21orf2	32988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr21	45890728	45891129	45890927	Y	NA	LRRC3,AP001065.15,C21orf90	NA	NA	NA	NA	AP001065.15	12331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr21	45914106	45914226	45914202	Y	NA	LRRC3,AP001065.15,C21orf90	NA	NA	NA	NA	AP001065.15	10646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr21	45925590	45925994	45925768	Y	NA	AP001065.15,C21orf90	NA	NA	NA	NA	C21orf90	9105	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.02430054543949
chr21	45943778	45945170	45944363	Y	NA	AP001065.15,C21orf90	NA	NA	NA	NA	C21orf90	8679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46097395	46097576	46097539	Y	KRTAP10-7,KRTAP10-12	NA	NA	NA	NA	NA	UBE2G2	122358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.389509847079085
chr21	46298625	46298957	46298811	Y	ITGB2	PTTG1IP	PTTG1IP	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	PTTG1IP	6873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr21	46300808	46301095	46300927	Y	ITGB2	PTTG1IP,ITGB2	PTTG1IP	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PTTG1IP	9056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46389792	46390113	46389960	Y	POFUT2,ITGB2	ITGB2,FAM207A	NA	NA	NA	NA	FAM207A	31867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46501791	46502122	46501857	Y	NA	ADARB1	NA	NA	NA	NA	ADARB1	10023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46726845	46727332	46727050	Y	NA	POFUT2	NA	NA	NA	NA	POFUT2	21032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr21	46738832	46739011	46738964	Y	COL18A1	POFUT2	COL18A1	MCF7	ChIA-PET	22265404	POFUT2	33019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.640969883230216
chr21	46749567	46749782	46749739	Y	NA	POFUT2	COL18A1,LINC00315,LOC642852,POFUT2,COL18A1-AS1,LOC100129027,PCBP3,ADARB1,SLC19A1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	POFUT2	43754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr21	46749941	46750271	46750188	Y	NA	POFUT2	COL18A1,LINC00315,LOC642852,POFUT2,COL18A1-AS1,LOC100129027,PCBP3,ADARB1,SLC19A1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	POFUT2	44128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.434215618131408
chr21	46786853	46787266	46786994	Y	COL18A1,POFUT2	COL18A1	ADARB1,LOC642852,LINC00315,POFUT2,COL18A1-AS1,COL18A1	IMR90	Hi-C	24141950	COL18A1	35786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr21	46823895	46824295	46824014	Y	COL18A1	COL18A1	NA	NA	NA	NA	COL18A1	843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	46824359	46824541	46824457	Y	COL18A1	COL18A1	NA	NA	NA	NA	COL18A1	1307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr21	46831544	46831752	46831652	Y	NA	COL18A1	NA	NA	NA	NA	COL18A1	8492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46836537	46836812	46836569	Y	NA	COL18A1	NA	NA	NA	NA	COL18A1	13485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	46850245	46850628	46850488	Y	NA	COL18A1	NA	NA	NA	NA	COL18A1	27193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	46891281	46891413	46891347	Y	NA	NA	SLC19A1	IMR90	Hi-C	24141950	COL18A1	68229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	47035179	47035682	47035497	Y	NA	AL133493.2	PCBP3,POFUT2,SLC19A1,COL18A1,LOC100129027,ADARB1	IMR90	Hi-C	24141950	AL133493.2	23611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	47295042	47295436	47295304	Y	NA	NA	NA	NA	NA	NA	COL6A1	104215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	47442529	47442669	47442610	Y	NA	COL6A1	NA	NA	NA	NA	COL6A1	42878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	47554885	47555152	47555043	Y	FTCD	COL6A2,FTCD	NA	NA	NA	NA	FTCD	18329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	47564330	47564867	47564460	Y	S100B,FTCD	COL6A2,FTCD	NA	NA	NA	NA	FTCD	8614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr21	47637534	47637799	47637667	Y	NA	LSS,MCM3AP-AS1	NA	NA	NA	NA	LSS	8939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr21	47935050	47935239	47935141	Y	NA	NA	NA	NA	NA	NA	DIP2A	58238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr21	47968526	47968894	47968542	Y	NA	NA	NA	NA	NA	NA	PRMT2	84185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr21	48042238	48042469	48042310	Y	DIP2A,PRMT2	PRMT2	DIP2A,PCNT,S100B,PRMT2	IMR90	Hi-C	24141950	PRMT2	10610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr22	17568441	17568522	17568513	Y	NA	IL17RA	NA	NA	NA	NA	IL17RA	4597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	18264097	18264299	18264131	Y	CECR2,BCL2L13,BID,BID	BID,LINC00528	NA	NA	NA	NA	LINC00528	6009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	18264435	18264847	18264620	Y	CECR2,ATP6V1E1,BCL2L13,USP18,BID,BID	BID,LINC00528	NA	NA	NA	NA	LINC00528	6347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	18402838	18403339	18403237	Y	NA	NA	NA	NA	NA	NA	MICAL3	101986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	18404666	18404945	18404902	Y	NA	NA	NA	NA	NA	NA	MICAL3	100380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	18452405	18452779	18452681	Y	NA	NA	NA	NA	NA	NA	MICAL3	52546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	18506386	18506784	18506419	Y	MICAL3	MICAL3	NA	NA	NA	NA	MICAL3	1061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	18527544	18527739	18527656	Y	SLC25A18,MICAL3	MICAL3,PEX26	NA	NA	NA	NA	MICAL3	22219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr22	18538907	18539143	18539025	Y	NA	MICAL3,PEX26	NA	NA	NA	NA	PEX26	19546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr22	18539229	18539381	18539279	Y	NA	MICAL3,PEX26	NA	NA	NA	NA	PEX26	19308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	18540524	18540746	18540641	Y	NA	MICAL3,PEX26	NA	NA	NA	NA	PEX26	17943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	18551113	18551402	18551354	Y	NA	MICAL3,PEX26	BID,MICAL3,FLJ41941,PEX26	IMR90	Hi-C	24141950	PEX26	7287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.289915168475891
chr22	19043288	19043502	19043327	Y	NA	NA	NA	NA	NA	NA	DGCR2	64465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr22	19073720	19074078	19073888	Y	NA	DGCR2	NA	NA	NA	NA	DGCR2	33889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	19159081	19159242	19159165	Y	NA	DGCR14,SLC25A1	NA	NA	NA	NA	SLC25A1	5101	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.50962184976476
chr22	19331396	19331535	19331466	Y	NA	NA	NA	NA	NA	NA	CLTCL1	54157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	19378121	19378382	19378253	Y	NA	MRPL40	NA	NA	NA	NA	MRPL40	39043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr22	19410653	19410889	19410838	Y	HIRA	MRPL40,HIRA,AC000068.5,C22orf39	NA	NA	NA	NA	MRPL40	6536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr22	19749283	19749521	19749403	Y	NA	SEPT5,GP1BB,TBX1	NA	NA	NA	NA	TBX1	7057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	19811643	19811941	19811792	Y	NA	C22orf29,GNB1L	NA	NA	NA	NA	C22orf29	28478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217599435237977
chr22	19869401	19869687	19869604	Y	NA	C22orf29,GNB1L	NA	NA	NA	NA	GNB1L	28939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr22	19930770	19931097	19930953	Y	ZDHHC8,COMT	COMT,TXNRD2	NA	NA	NA	NA	TXNRD2	3429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	19946850	19947150	19946987	Y	NA	COMT,TXNRD2	NA	NA	NA	NA	TXNRD2	19509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.336918461037618
chr22	19983308	19983423	19983389	Y	NA	ARVCF	NA	NA	NA	NA	ARVCF	18908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr22	19983834	19983932	19983883	Y	NA	ARVCF	NA	NA	NA	NA	ARVCF	18399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	20068627	20068902	20068750	Y	COMT,DGCR8	DGCR8,RANBP1,TRMT2A,ZDHHC8	NA	NA	NA	NA	DGCR8	2872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr22	20850844	20851071	20850923	Y	PI4KA,AIFM3,AIFM3	KLHL22,MED15	NA	NA	NA	NA	MED15	2644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr22	20863506	20864089	20863850	Y	MED15	KLHL22,MED15	NA	NA	NA	NA	MED15	15306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr22	20923375	20923909	20923414	Y	THAP7,MED15	NA	NA	NA	NA	NA	MED15	75175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	21131289	21131349	21131319	Y	NA	SERPIND1	NA	NA	NA	NA	SERPIND1	5122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr22	21132162	21132336	21132252	Y	NA	SERPIND1	NA	NA	NA	NA	SERPIND1	5995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr22	21273214	21273312	21273263	Y	NA	CRKL,XXbac-B135H6.15	NA	NA	NA	NA	CRKL	3500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr22	21979927	21980091	21980009	Y	NA	YDJC,CCDC116,SDF2L1,PPIL2	NA	NA	NA	NA	YDJC	2262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	22011632	22012115	22011859	Y	NA	YDJC,CCDC116,SDF2L1,PPIL2	NA	NA	NA	NA	PPIL2	7073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.838684361919784
chr22	22186398	22186549	22186531	Y	NA	MAPK1	NA	NA	NA	NA	MAPK1	33421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	22290676	22291029	22290778	Y	MAPK1,PPM1F	PPM1F,TOP3B	NA	NA	NA	NA	PPM1F	14180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	22334723	22335115	22334952	Y	NA	PPM1F,TOP3B	NA	NA	NA	NA	TOP3B	98	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	23413714	23413937	23413833	Y	NA	GNAZ	NA	NA	NA	NA	GNAZ	3174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr22	23415058	23415342	23415197	Y	NA	GNAZ	NA	NA	NA	NA	GNAZ	4518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	23480066	23480419	23480308	Y	RTDR1,BCR	RTDR1,RAB36,BCR	NA	NA	NA	NA	RTDR1	4789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	23528251	23528416	23528284	Y	BCR	RTDR1,RAB36,BCR	NA	NA	NA	NA	BCR	8360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	23863249	23863551	23863355	Y	NA	NA	ZDHHC8P1	IMR90	Hi-C	24141950	ZDHHC8P1	120336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr22	23863943	23864332	23864232	Y	GNAZ,RTDR1,BCR	NA	ZDHHC8P1	IMR90	Hi-C	24141950	ZDHHC8P1	121030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.786092975878317
chr22	24080371	24080411	24080401	Y	NA	GUSBP11,ZNF70,MMP11,CHCHD10,SMARCB1	NA	NA	NA	NA	ZNF70	10868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	24153288	24153648	24153392	Y	RGL4,LOC391322	MMP11,CHCHD10,SMARCB1,SLC2A11	DERL3	IMR90	Hi-C	24141950	SMARCB1	26138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr22	24255997	24256450	24256302	Y	C22orf43,CABIN1,CABIN1	MIF	NA	NA	NA	NA	MIF	21806	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.29739028934199
chr22	24470506	24470556	24470531	Y	NA	NA	NA	NA	NA	NA	CABIN1	64864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	24603797	24604355	24604162	Y	GGT1,ADORA2A	SUSD2	NA	NA	NA	NA	SUSD2	28570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	24752898	24753006	24752951	Y	UPB1	NA	NA	NA	NA	NA	ADORA2A	58841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	24767148	24767407	24767278	Y	GGT1	ADORA2A	NA	NA	NA	NA	ADORA2A	44440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	24795656	24796304	24795694	Y	NA	ADORA2A	NA	NA	NA	NA	ADORA2A	15543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr22	24897452	24897663	24897568	Y	NA	NA	NA	NA	NA	NA	SNRPD3	51808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr22	24903018	24903252	24903052	Y	GGT1,ADORA2A	SNRPD3	NA	NA	NA	NA	SNRPD3	46219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr22	24948988	24949121	24949055	Y	ADORA2A	SNRPD3,GGT1,FAM211B	NA	NA	NA	NA	SNRPD3	350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr22	25082452	25082825	25082629	Y	ADORA2A,GGT1	CRIP1P4	PIWIL3	IMR90	Hi-C	24141950	CRIP1P4	23434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	25348731	25349104	25348989	Y	NA	NA	SGSM1,KIAA1671,TMEM211	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNORD56	53550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239460694591866
chr22	25349333	25349980	25349695	Y	NA	NA	SGSM1,KIAA1671,TMEM211	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SNORD56	54152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	25352141	25352414	25352278	Y	NA	NA	KIAA1671,SGSM1,TMEM211	IMR90	Hi-C	24141950	SNORD56	56960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	25365957	25366157	25366057	Y	NA	NA	KIAA1671	IMR90	Hi-C	24141950	SNORD56	70776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	25458331	25458606	25458444	Y	NA	NA	NA	NA	NA	NA	SNORD56	163150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	27041081	27041748	27041447	Y	SEZ6L,ASPHD2	CTA-211A9.5	MIAT	IMR90	Hi-C	24141950	CTA-211A9.5	24982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	27508990	27509624	27509325	Y	NA	NA	PITPNB,MIAT	IMR90	Hi-C	24141950	CTA-929C8.8	216124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	27511834	27512126	27511988	Y	NA	NA	PITPNB,MIAT	IMR90	Hi-C	24141950	CTA-929C8.8	213622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	28065247	28065726	28065530	Y	PITPNB,MN1	NA	MIAT,MN1	IMR90	Hi-C	24141950	MN1	129760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.531513286832398
chr22	28066220	28066571	28066325	Y	PITPNB,MN1	NA	MIAT,MN1	IMR90	Hi-C	24141950	MN1	128915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	28115717	28115905	28115775	Y	NA	NA	NA	NA	NA	NA	MN1	79581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	28261904	28262359	28262203	Y	PITPNB,MN1	NA	NA	NA	NA	NA	TTC28-AS1	51005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	28304832	28305219	28305193	Y	NA	TTC28-AS1,PITPNB	NA	NA	NA	NA	TTC28-AS1	8145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr22	28549378	28549438	28549411	Y	NA	NA	NA	NA	NA	NA	PITPNB	235256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr22	28837872	28838192	28838073	Y	TTC28	NA	NA	NA	NA	NA	HSCB	297827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr22	28879777	28880035	28879909	Y	NA	NA	NA	NA	NA	NA	HSCB	255984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	28956104	28956479	28956470	Y	NA	NA	NA	NA	NA	NA	HSCB	179540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29124446	29124891	29124760	Y	NA	HSCB,CHEK2,CCDC117	NA	NA	NA	NA	HSCB	11128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	29165082	29165344	29165211	Y	C22orf31	HSCB,CHEK2,CCDC117,XBP1,CTA-292E10.6	NA	NA	NA	NA	CCDC117	1318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29188218	29188399	29188309	Y	NA	CCDC117,XBP1,CTA-292E10.6	NA	NA	NA	NA	XBP1	6186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	29194018	29194404	29194339	Y	NA	CCDC117,XBP1,CTA-292E10.6	NA	NA	NA	NA	XBP1	181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr22	29206791	29206989	29206921	Y	EMID1,CCDC117,XBP1	CCDC117,XBP1,CTA-292E10.6	XBP1	K562	ChIA-PET	22265404	CTA-292E10.6	12120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr22	29207861	29207973	29207910	Y	EMID1	CCDC117,XBP1,CTA-292E10.6	XBP1,CHEK2,HSCB,C22orf31,ZNRF3,KREMEN1,TTC28,TTC28-AS1,EMID1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CTA-292E10.6	13190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr22	29209751	29210048	29209892	Y	CCDC117,XBP1	CCDC117,XBP1,CTA-292E10.6	CHEK2,HSCB,C22orf31,ZNRF3,KREMEN1,TTC28,TTC28-AS1,EMID1,CCDC117,XBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTA-292E10.6	15080	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.09983590839719
chr22	29215471	29215733	29215666	Y	XBP1	CCDC117,XBP1,CTA-292E10.6	TTC28-AS1,TTC28,ZNRF3,EMID1,CCDC117,XBP1,KREMEN1,CHEK2,HSCB,C22orf31	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTA-292E10.6	20800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr22	29218930	29219398	29218977	Y	NA	XBP1,CTA-292E10.6	TTC28-AS1,TTC28,ZNRF3,EMID1,CCDC117,XBP1,KREMEN1,HSCB,CHEK2,C22orf31	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTA-292E10.6	24259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr22	29261004	29261197	29261109	Y	ZNRF3	ZNRF3	TTC28,ZNRF3,KREMEN1,C22orf31,EMID1,EWSR1,RHBDD3	IMR90	Hi-C	24141950	ZNRF3	16383	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.1197203533384
chr22	29280564	29280869	29280661	Y	NA	ZNRF3	NA	NA	NA	NA	ZNRF3	2984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.609577211294815
chr22	29319930	29320200	29320120	Y	NA	ZNRF3	NA	NA	NA	NA	ZNRF3	42350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr22	29365910	29365950	29365937	Y	NA	NA	NA	NA	NA	NA	ZNRF3	88330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29428666	29428910	29428854	Y	C22orf31	KREMEN1	NA	NA	NA	NA	KREMEN1	38156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29467563	29467858	29467701	Y	NA	KREMEN1	NA	NA	NA	NA	KREMEN1	497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.589361237926095
chr22	29469912	29470391	29470070	Y	XBP1,KREMEN1	KREMEN1	NA	NA	NA	NA	KREMEN1	2846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr22	29545879	29545979	29545929	Y	AP1B1	NA	NA	NA	NA	NA	EMID1	53861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29548210	29548510	29548260	Y	KREMEN1	NA	NA	NA	NA	NA	EMID1	51330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	29595756	29595942	29595849	Y	EMID1	EMID1	NA	NA	NA	NA	EMID1	3898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29705410	29705600	29705517	Y	GAS2L1	EWSR1,RHBDD3,GAS2L1	NA	NA	NA	NA	GAS2L1	4838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	29765526	29765849	29765726	Y	ZNRF3,RASL10A,CABP7,NEFH	NA	NA	NA	NA	NA	AP1B1	51319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	30018031	30018407	30018261	Y	NF2	NIPSNAP1,NF2	NA	NA	NA	NA	NF2	20486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	30279863	30280214	30279898	Y	NA	ASCC2,MTMR3	NA	NA	NA	NA	MTMR3	2719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	30390990	30391309	30391217	Y	NA	NA	NA	NA	NA	NA	MTMR3	113846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	30591785	30593544	30592394	Y	NA	LIF	NA	NA	NA	NA	LIF	47296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.161065241701938
chr22	30601535	30602099	30601994	Y	MTMR3,SLC35E4,SF3A1,DUSP18,CCDC157,OSM,LIF	LIF	HORMAD2,LIF,GATSL3	IMR90	Hi-C	24141950	LIF	38741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr22	30604572	30605275	30604996	Y	NA	LIF	HORMAD2,LIF,GATSL3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LIF	35565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr22	30608541	30609106	30608754	Y	MTMR3,TBC1D10A,SLC35E4,SF3A1,DUSP18,CCDC157,OSM,LIF	LIF	NA	NA	NA	NA	LIF	31734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr22	30643780	30644513	30644215	Y	GAL3ST1,LIF	LIF,GATSL3	NA	NA	NA	NA	LIF	2940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	30644816	30645407	30645321	Y	NA	LIF,GATSL3	NA	NA	NA	NA	LIF	3976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.703092170245995
chr22	30651841	30652045	30651989	Y	RNF215	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	11001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr22	30652191	30652351	30652329	Y	RNF215,GAL3ST1	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	11351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	30653574	30654311	30654075	Y	RNF215,GAL3ST1	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	12734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr22	30657088	30657478	30657295	Y	MTMR3,TBC1D10A,SLC35E4,SF3A1,DUSP18,CCDC157,OSM	LIF,GATSL3	LIF	IMR90	Hi-C	24141950	LIF	16248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	30801557	30801812	30801706	Y	OSM,CCDC157,SF3A1	SEC14L2,RNF215,MTFP1	NA	NA	NA	NA	SEC14L2	10711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr22	30808332	30808723	30808528	Y	NA	SEC14L2,RNF215,MTFP1	NA	NA	NA	NA	RNF215	7037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	30938421	30938985	30938910	Y	LIF,OSM,TBC1D10A,CCDC157,SF3A1,DUSP18	SEC14L4,SIRPAP1,GAL3ST1	NA	NA	NA	NA	SIRPAP1	1898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr22	30939850	30940240	30940045	Y	NA	SEC14L4,SIRPAP1,GAL3ST1	NA	NA	NA	NA	SIRPAP1	3327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	31294163	31294373	31294268	Y	OSBP2	NA	MORC2,MORC2-AS1	IMR90	Hi-C	24141950	MORC2	67911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	31343097	31343477	31343430	Y	NA	MORC2,TUG1	NA	NA	NA	NA	MORC2	18807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	31440281	31440520	31440401	Y	NA	SMTN	OSBP2,MORC2,TUG1,MORC2-AS1,SMTN,PLA2G3,INPP5J,LIMK2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SMTN	17571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.417450826084987
chr22	31467272	31467654	31467462	Y	NA	SMTN,SELM,INPP5J	OSBP2,MORC2,MORC2-AS1,TUG1,SELM,SMTN	IMR90	Hi-C	24141950	SMTN	9181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	31609195	31609531	31609513	Y	RNF185,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	2970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	31617973	31618078	31618026	Y	RNF185,SFI1,EIF4ENIF1,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	11748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	31626331	31627201	31626769	Y	SMTN,RNF185,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	20106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	31629034	31629491	31629163	Y	SMTN,RNF185,LIMK2	LIMK2	NA	NA	NA	NA	LIMK2	22809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	31665995	31666466	31666007	Y	NA	PIK3IP1	NA	NA	NA	NA	PIK3IP1	20054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	32048774	32049039	32049031	Y	NA	PISD	SFI1,EIF4ENIF1,DEPDC5,YWHAH,C22orf24,C22orf28,LOC339666,RFPL3-AS1,PRR14L	GM12878,K562,IMR90	5C,Hi-C	22955621,24141950	PISD	7379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	32806612	32806674	32806643	Y	RFPL2,RFPL3,TIMP3	NA	NA	NA	NA	NA	FBXO7	61989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	32928366	32928835	32928615	Y	NA	NA	NA	NA	NA	NA	FBXO7	59703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.58114460611664
chr22	33164513	33164882	33164796	Y	BPIL2,SYN3,SYN3	TIMP3	NA	NA	NA	NA	TIMP3	30805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr22	33170286	33170551	33170419	Y	NA	TIMP3	NA	NA	NA	NA	TIMP3	25136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	33176423	33176673	33176603	Y	NA	TIMP3	NA	NA	NA	NA	TIMP3	19014	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.67786035001184
chr22	33199078	33199894	33199157	Y	NA	TIMP3	NA	NA	NA	NA	TIMP3	3391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr22	33202022	33202333	33202121	Y	NA	TIMP3	NA	NA	NA	NA	TIMP3	6335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr22	33221390	33221677	33221534	Y	SYN3	TIMP3,Z98256.1	NA	NA	NA	NA	TIMP3	25703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	33265683	33265702	33265692	Y	TIMP3	Z98256.1	NA	NA	NA	NA	Z98256.1	11263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	34055725	34056096	34055879	Y	NA	SNORA76	NA	NA	NA	NA	SNORA76	42810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr22	34073272	34073505	34073390	Y	NA	SNORA76	NA	NA	NA	NA	SNORA76	25401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	34167018	34167152	34167086	Y	NA	NA	NA	NA	NA	NA	SNORA76	68112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	34249918	34249944	34249938	Y	NA	NA	NA	NA	NA	NA	SNORA76	151012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	34263249	34263475	34263362	Y	NA	NA	NA	NA	NA	NA	SNORA76	164343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	34265977	34266148	34266046	Y	NA	NA	NA	NA	NA	NA	SNORA76	167071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	34317541	34317731	34317667	Y	LARGE	NA	NA	NA	NA	NA	SNORA76	218635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	35443354	35443580	35443467	Y	TOM1,TOM1,HMOX1	ISX	ISX	IMR90	Hi-C	24141950	ISX	16549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr22	35529944	35530291	35530139	Y	ISX	NA	LARGE	IMR90	Hi-C	24141950	ISX	69815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	35708559	35708961	35708654	Y	APOL6,TOM1,TOM1,HMOX1	TOM1	NA	NA	NA	NA	TOM1	15291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	35724557	35724815	35724671	Y	APOL6,TOM1,TOM1,HMOX1	TOM1,HMOX1	NA	NA	NA	NA	TOM1	31289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr22	36149671	36149849	36149827	Y	NA	NA	APOL5	IMR90	Hi-C	24141950	APOL6	107229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	36299462	36299943	36299718	Y	NA	NA	NA	NA	NA	NA	RBFOX2	122530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr22	36310688	36310985	36310744	Y	NA	NA	NA	NA	NA	NA	RBFOX2	111488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	36343697	36344006	36343862	Y	NA	NA	NA	NA	NA	NA	RBFOX2	78467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	36385915	36386246	36386112	Y	NA	RBFOX2	NA	NA	NA	NA	RBFOX2	36227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr22	36648054	36648234	36648105	Y	NA	APOL2,APOL1	NA	NA	NA	NA	APOL1	998	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.40257306142493
chr22	36727482	36728450	36727733	Y	APOL3	NA	NA	NA	NA	NA	MYH9	53613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr22	36746983	36747265	36747123	Y	NA	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	34798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr22	36748222	36748386	36748297	Y	NA	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	33677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.943044491010134
chr22	36750973	36751374	36751265	Y	APOL3	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	30689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr22	36766615	36766810	36766723	Y	NCF4,MYH9	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	15253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	36767098	36767482	36767405	Y	NA	MYH9,RP4-633O19__A.1	NA	NA	NA	NA	MYH9	14581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr22	36806147	36806450	36806256	Y	NA	MYH9,RP4-633O19__A.1	MYH9,FOXRED2,TXN2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP4-633O19__A.1	23476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.946827200759944
chr22	36815362	36815553	36815536	Y	NA	MYH9,RP4-633O19__A.1	MYH9,FOXRED2,TXN2	IMR90	Hi-C	24141950	RP4-633O19__A.1	32691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr22	36828742	36828858	36828800	Y	NA	MYH9,RP4-633O19__A.1,TXN2	MYH9,FOXRED2,TXN2	IMR90	Hi-C	24141950	RP4-633O19__A.1	46071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	36829412	36829614	36829519	Y	FOXRED2,FOXRED2	MYH9,RP4-633O19__A.1,TXN2	TXN2,MYH9	IMR90	Hi-C	24141950	TXN2	46463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr22	36847830	36847945	36847861	Y	APOL3,APOL3,APOL2,APOL2,NCF4,CSF2RB	TXN2	NA	NA	NA	NA	TXN2	28132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr22	36855477	36855678	36855599	Y	NA	TXN2,FOXRED2	NA	NA	NA	NA	TXN2	20399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	36858236	36858440	36858372	Y	MYH9	TXN2,FOXRED2	NA	NA	NA	NA	TXN2	17637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	36924116	36924377	36924195	Y	NA	TXN2,FOXRED2,EIF3D	NA	NA	NA	NA	EIF3D	633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	37045124	37045370	37045286	Y	APOL3,IFT27,CACNG2	NA	NA	NA	NA	NA	EIF3D	121641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	37428831	37429188	37428927	Y	CARD10,TMPRSS6,TST,MPST	MPST,TST,KCTD17	KCTD17,TMPRSS6	IMR90	Hi-C	24141950	TST	15150	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.39919167921388
chr22	37490501	37490532	37490517	Y	NA	KCTD17,TMPRSS6	NA	NA	NA	NA	TMPRSS6	13071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	37897761	37897917	37897872	Y	NA	MFNG,CARD10	NA	NA	NA	NA	CARD10	15632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr22	37942064	37942352	37942192	Y	KCTD17,TRIOBP,POLR2F,MICALL1,LGALS1,ANKRD54,CARD10,CDC42EP1	CARD10,CDC42EP1	ELFN2,CYTH4,CARD10,CDC42EP1,LGALS2,GGA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CDC42EP1	12102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.21628516607312
chr22	37942978	37943343	37943114	Y	NA	CARD10,CDC42EP1	ELFN2,CYTH4,CARD10,CDC42EP1,LGALS2,GGA1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CDC42EP1	11111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr22	37948648	37948841	37948736	Y	NA	CARD10,CDC42EP1	NA	NA	NA	NA	CDC42EP1	5613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr22	37957606	37958042	37957847	Y	NA	CARD10,CDC42EP1,GGA1	NA	NA	NA	NA	CDC42EP1	3152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr22	37997690	37997947	37997695	Y	GGA1,GGA1	CDC42EP1,GGA1,SH3BP1	CYTH4,LGALS2,CDC42EP1,CARD10,MFNG,SH3BP1,PDXP,GGA1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GGA1	4534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr22	38003646	38003923	38003656	Y	GGA1,GGA1	CDC42EP1,GGA1,SH3BP1,PDXP	NA	NA	NA	NA	GGA1	1165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	38139873	38139989	38139967	Y	NA	TRIOBP	H1F0,GCAT	IMR90	Hi-C	24141950	TRIOBP	48862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	38198030	38198142	38198086	Y	NA	H1F0,GCAT,MIR658,EIF3L,ANKRD54	NA	NA	NA	NA	H1F0	972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	38199242	38199532	38199401	Y	NA	H1F0,GCAT,MIR658,EIF3L,ANKRD54	NA	NA	NA	NA	H1F0	128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr22	38292237	38292573	38292408	Y	CARD10,SH3BP1,MICALL1	EIF3L,ANKRD54,MICALL1	NA	NA	NA	NA	MICALL1	7091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr22	38294842	38295023	38294932	Y	CARD10,CDC42EP1,SH3BP1,MICALL1	MICALL1	NA	NA	NA	NA	MICALL1	4641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr22	38351215	38351232	38351224	Y	NA	POLR2F,C22orf23,SOX10	NA	NA	NA	NA	C22orf23	3539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	38413617	38413853	38413758	Y	SOX10	SOX10,PICK1	SOX10,POLR2F,PICK1,MAFF	IMR90	Hi-C	24141950	SOX10	32188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	38458818	38459072	38458999	Y	SOX10,PLA2G6,PLA2G6,PICK1,SLC16A8	PICK1	NA	NA	NA	NA	PICK1	8500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	38599886	38600218	38600032	Y	NA	MAFF,PLA2G6	NA	NA	NA	NA	PLA2G6	189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	38614588	38614867	38614785	Y	MICALL1,TMEM184B,TMEM184B,CSNK1E,MAFF,MAFF	MAFF,PLA2G6	NA	NA	NA	NA	PLA2G6	14891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr22	38711439	38711868	38711815	Y	SUN2,SUN2,JOSD1,GTPBP1,PLA2G6,PLA2G6	TMEM184B	NA	NA	NA	NA	TMEM184B	44399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	38750839	38750902	38750852	Y	NA	CSNK1E	NA	NA	NA	NA	CSNK1E	41625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	38857668	38857748	38857703	Y	NA	KDELR3,DDX17	KCNJ4	K562	ChIA-PET	22265404	KDELR3	4319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	38859370	38859653	38859488	Y	NA	KDELR3,DDX17	NA	NA	NA	NA	KDELR3	2414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr22	39377467	39377527	39377498	Y	DNAL4,CBX6,APOBEC3B	APOBEC3B,APOBEC3C,APOBEC3D	NA	NA	NA	NA	APOBEC3B	1115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	39570711	39571096	39570941	Y	JOSD1,GTPBP1,SUN2,SUN2,PDGFB,APOBEC3G,APOBEC3H	CBX7	PDGFB,SNORD83A,RNU86,SNORD83B,RPL3	MCF7,K562	ChIA-PET	22265404	CBX7	24032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr22	39572231	39572423	39572299	Y	TOMM22,PDGFB	CBX7	PDGFB,SNORD83A,RNU86,SNORD83B,RPL3	MCF7,K562	ChIA-PET	22265404	CBX7	25552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	39610460	39610820	39610697	Y	NA	PDGFB	NA	NA	NA	NA	PDGFB	27936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	39637977	39638270	39638005	Y	MGAT3,MGAT3,SUN2,SUN2,NPTXR,CBX7,SYNGR1,PDGFB	PDGFB	NA	NA	NA	NA	PDGFB	486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	39649567	39649736	39649595	Y	SUN2,APOBEC3A,PDGFB	PDGFB	CBX7,RNU86,RPL3,SNORD83A,PDGFB	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PDGFB	10811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	39650923	39651173	39651026	Y	ATF4,SUN2,SUN2,APOBEC3A	PDGFB	CBX7,RNU86,RPL3,SNORD83A,PDGFB	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PDGFB	12167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	39679510	39679847	39679626	Y	NA	PDGFB,RPL3	CBX7,PDGFB,SNORD83A,SNORD83B,RNU86,RPL3	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RPL3	34547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr22	39686679	39687117	39686848	Y	NA	PDGFB,RPL3	CBX7	IMR90	Hi-C	24141950	RPL3	27277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	39693596	39693744	39693670	Y	MGAT3	RPL3	NA	NA	NA	NA	RPL3	20650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr22	39695935	39696099	39695991	Y	ATF4,APOBEC3A	RPL3,SYNGR1	NA	NA	NA	NA	RPL3	18295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	39696256	39696487	39696398	Y	ATF4,APOBEC3A	RPL3,SYNGR1	NA	NA	NA	NA	RPL3	17907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	39704707	39705214	39704970	Y	ATF4,APOBEC3A	RPL3,SYNGR1	NA	NA	NA	NA	RPL3	9180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	40573139	40573276	40573210	Y	NA	NA	NA	NA	NA	NA	RPL7P52	72069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	40575185	40575584	40575306	Y	TNRC6B,TNRC6B	NA	NA	NA	NA	NA	RPL7P52	74115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	40589903	40590338	40589971	Y	NA	NA	NA	NA	NA	NA	RPL7P52	88833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	40958851	40958976	40958969	Y	NA	NA	NA	NA	NA	NA	MKL1	71730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr22	40982487	40982801	40982645	Y	NA	MKL1	NA	NA	NA	NA	MKL1	47905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	41047729	41047883	41047796	Y	NA	MKL1,GAPDHP37,MCHR1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.755191930115189
chr22	41048065	41048352	41048232	Y	EP300,MKL1	MKL1,GAPDHP37,MCHR1	ST13,MKL1,MCHR1,ADSL	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MKL1	17359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.230421419789826
chr22	41346258	41346618	41346399	Y	EP300	RBX1	NA	NA	NA	NA	RBX1	907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	41416837	41417114	41416960	Y	NA	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	40942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	41417973	41418366	41418067	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr22	41418482	41418837	41418726	Y	MKL1,EP300	RP11-12M9.3	ST13,RBX1,MIR1281,EP300	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-12M9.3	39219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.429610265389015
chr22	41460471	41460696	41460583	Y	NA	RP11-12M9.3,EP300	RBX1,EP300,XPNPEP3,MIR1281,RANGAP1,CHADL,L3MBTL2	IMR90	Hi-C	24141950	RP11-12M9.3	2415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr22	41684313	41684541	41684479	Y	PPPDE2,RANGAP1	CHADL,RANGAP1,ZC3H7B	NA	NA	NA	NA	RANGAP1	4058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr22	41776948	41777130	41776981	Y	NA	TEF	NA	NA	NA	NA	TEF	15611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	41809427	41810696	41809981	Y	CCDC134,EP300,CHADL,TOB2,ACO2,TEF,TEF	TEF,TOB2	NA	NA	NA	NA	TOB2	30331	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.19269914343133
chr22	41839332	41839605	41839469	Y	TOB2	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	1422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	41840300	41840792	41840564	Y	NA	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.360585615728637
chr22	41844337	41844774	41844650	Y	SHISA8,TEF,TEF,TOB2	TOB2,PHF5A,ACO2	NA	NA	NA	NA	TOB2	3310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr22	42062739	42062953	42062873	Y	NA	XRCC6,C22orf46,NHP2L1,MEI1	NA	NA	NA	NA	C22orf46	19990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr22	42073632	42073949	42073667	Y	TOB2	C22orf46,NHP2L1,MEI1	NA	NA	NA	NA	C22orf46	8994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	42339043	42339310	42339264	Y	NA	SHISA8,TNFRSF13C,CENPM	NA	NA	NA	NA	CENPM	1858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	42485778	42486189	42485966	Y	CCDC134,CENPM,NFAM1,C22orf32	NAGA,NDUFA6,OLA1P1,CYP2D6	NA	NA	NA	NA	NDUFA6	819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr22	42527695	42528060	42527840	Y	CYP2D6	NDUFA6,OLA1P1,CYP2D6	NA	NA	NA	NA	CYP2D6	2787	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.319662042818924
chr22	42696005	42696062	42696030	Y	SEPT3,NFAM1	NA	TCF20,NFAM1	IMR90	Hi-C	24141950	Z83851.1	67180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	43144166	43144283	43144173	Y	NA	A4GALT	CYB5R3,ARFGAP3,PACSIN2,A4GALT	IMR90	Hi-C	24141950	A4GALT	28862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	43149049	43149238	43149147	Y	NA	A4GALT	CYB5R3,A4GALT,ARFGAP3	IMR90	Hi-C	24141950	A4GALT	33745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	43165805	43166293	43166166	Y	NFAM1,ARFGAP3	NA	ARFGAP3,PACSIN2,CYB5R3	IMR90	Hi-C	24141950	A4GALT	50501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr22	43233624	43233705	43233665	Y	NA	ARFGAP3	NA	NA	NA	NA	ARFGAP3	18407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	43325269	43325577	43325499	Y	NFAM1,POLDIP3,ARFGAP3,PACSIN2	NA	NA	NA	NA	NA	ARFGAP3	73157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr22	43327845	43328148	43328016	Y	NFAM1,POLDIP3,ARFGAP3,PACSIN2,PACSIN2	NA	NA	NA	NA	NA	ARFGAP3	75733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	43369643	43369761	43369702	Y	NA	PACSIN2	NA	NA	NA	NA	PACSIN2	39390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	43387243	43387305	43387274	Y	PACSIN2,PACSIN2	PACSIN2	NA	NA	NA	NA	PACSIN2	21846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr22	43400219	43400728	43400510	Y	NA	PACSIN2	NA	NA	NA	NA	PACSIN2	8423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	43500072	43500319	43500196	Y	NA	TTLL1,BIK,MCAT,TSPO	MCAT,BIK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	BIK	4435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr22	43637220	43637343	43637282	Y	NA	Z99756.1	NA	NA	NA	NA	Z99756.1	32618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.300760338615061
chr22	43795472	43795645	43795562	Y	NA	NA	SCUBE1,EFCAB6,SULT4A1,MPPED1	IMR90	Hi-C	24141950	Z99756.1	125511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.255894469817976
chr22	44321391	44321759	44321599	Y	PNPLA3	PNPLA3,SAMM50,RP4-796I17.5	NA	NA	NA	NA	PNPLA3	3772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.574242243472042
chr22	45016324	45016531	45016433	Y	PARVG,PARVG,PRR5	PRR5	NA	NA	NA	NA	PRR5	46062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	45081354	45081559	45081463	Y	NA	PRR5,PRR5-ARHGAP8,ARHGAP8	PARVB,KIAA1644,SAMM50	IMR90	Hi-C	24141950	PRR5-ARHGAP8	14554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	45543738	45543876	45543815	Y	PHF21B,NUP50,NUP50	CTA-217C2.1,NUP50	NA	NA	NA	NA	CTA-217C2.1	13786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	45642150	45642482	45642292	Y	NA	KIAA0930	LOC100506714,NUP50,KIAA0930,UPK3A,FBLN1,SMC1B	IMR90	Hi-C	24141950	KIAA0930	7500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.382938501254799
chr22	45664918	45665214	45665118	Y	NA	KIAA0930,FAM118A	LOC100506714,SMC1B,PHF21B,FBLN1,KIAA0930,FAM118A,RIBC2,UPK3A,ATXN10	IMR90	Hi-C	24141950	KIAA0930	30268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.902612544272693
chr22	45668194	45668536	45668512	Y	PHF21B	KIAA0930,FAM118A	SMC1B,FBLN1,FAM118A,KIAA0930,UPK3A,RIBC2,ATXN10,LOC100506714,NUP50	IMR90	Hi-C	24141950	KIAA0930	33544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.477276103198563
chr22	45879926	45880282	45880095	Y	NA	FBLN1	FBLN1,NUP50,UPK3A,FAM118A,SMC1B	IMR90	Hi-C	24141950	FBLN1	15836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.405783012953233
chr22	45899980	45900171	45900075	Y	NA	FBLN1	NA	NA	NA	NA	FBLN1	3862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	45900177	45900595	45900449	Y	FBLN1	FBLN1	NA	NA	NA	NA	FBLN1	4059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	46028588	46028889	46028879	Y	WNT7B	ATXN10	NA	NA	NA	NA	ATXN10	36789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	46035019	46035329	46035174	Y	NA	ATXN10	NA	NA	NA	NA	ATXN10	30349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr22	46041491	46041960	46041628	Y	NA	ATXN10	ATXN10,WNT7B,FAM118A,SMC1B,FBLN1,LOC730668,LOC100271722,MIRLET7BHG	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ATXN10	23718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.636696058915332
chr22	46364946	46365266	46365098	Y	NA	WNT7B	NA	NA	NA	NA	WNT7B	5743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	46374166	46374684	46374539	Y	NA	WNT7B	NA	NA	NA	NA	WNT7B	3157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	46374858	46375446	46375153	Y	NA	WNT7B	NA	NA	NA	NA	WNT7B	3849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	46392166	46392677	46392532	Y	C22orf26	WNT7B	C22orf40,PKDREJ,ATXN10,GTSE1,CN5H6.4,TRMU	IMR90	Hi-C	24141950	WNT7B	21157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	46408022	46408110	46408057	Y	NA	WNT7B	NA	NA	NA	NA	WNT7B	37013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	46423205	46423605	46423251	Y	NA	NA	NA	NA	NA	NA	WNT7B	52196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	46467914	46468476	46468052	Y	NA	NA	NA	NA	NA	NA	PPARA	75948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	46676915	46677122	46676986	Y	TBC1D22A,CERK	TTC38,GTSE1,TRMU	NA	NA	NA	NA	GTSE1	13516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr22	46745093	46745309	46745201	Y	NA	TRMU	NA	NA	NA	NA	TRMU	20321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	46775439	46775628	46775534	Y	NA	NA	NA	NA	NA	NA	TRMU	50667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.546792379031214
chr22	46835614	46835885	46835771	Y	NA	NA	NA	NA	NA	NA	TRMU	110842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	46934777	46935027	46934877	Y	NA	GRAMD4	NA	NA	NA	NA	GRAMD4	34882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	46935060	46935431	46935290	Y	CELSR1	GRAMD4	NA	NA	NA	NA	GRAMD4	34478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	46944783	46944886	46944827	Y	NA	GRAMD4	NA	NA	NA	NA	GRAMD4	25023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	46957537	46957704	46957620	Y	NA	GRAMD4	TRMU,CELSR1,GRAMD4	IMR90	Hi-C	24141950	GRAMD4	12205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.674167938895547
chr22	46970983	46971382	46971054	Y	NA	GRAMD4	TRMU,GRAMD4,CELSR1	IMR90	Hi-C	24141950	GRAMD4	1074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	47045339	47045722	47045527	Y	PPARA,TTC38	NA	NA	NA	NA	NA	GRAMD4	75430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	47134957	47135355	47135288	Y	NA	CERK,TBC1D22A	NA	NA	NA	NA	CERK	2799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.33905537319506
chr22	47149923	47150411	47150155	Y	NA	CERK,TBC1D22A	CERK	MCF7	ChIA-PET	22265404	TBC1D22A	6107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	47150443	47150659	47150583	Y	CERK,TBC1D22A	CERK,TBC1D22A	CERK	MCF7	ChIA-PET	22265404	TBC1D22A	5859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.359271346563779
chr22	47330872	47331057	47330965	Y	NA	NA	NA	NA	NA	NA	TBC1D22A	174354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	47430319	47430671	47430495	Y	NA	NA	NA	NA	NA	NA	TBC1D22A	273801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	47498614	47499010	47498804	Y	NA	NA	NA	NA	NA	NA	TBC1D22A	342096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	47525665	47525872	47525801	Y	NA	NA	NA	NA	NA	NA	TBC1D22A	369147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	49135376	49135619	49135507	Y	NA	NA	NA	NA	NA	NA	BRD1	1083541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	49768624	49768992	49768711	Y	NA	NA	NA	NA	NA	NA	BRD1	450168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	49860945	49861166	49860973	Y	NA	NA	NA	NA	NA	NA	BRD1	357994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr22	50327213	50327243	50327226	Y	PIM3	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	17107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	50327730	50328489	50328002	Y	TRABD,SELO,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	17624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr22	50329443	50330313	50330025	Y	TUBGCP6,TRABD,PIM3,PANX2,HDAC10,BRD1	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	19337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr22	50330725	50331030	50330945	Y	MAPK12,MAPK11	CRELD2,ALG12,PIM3	NA	NA	NA	NA	ALG12	20619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	50331571	50331948	50331720	Y	MAPK12	CRELD2,ALG12,PIM3	NA	NA	NA	NA	PIM3	20213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr22	50336699	50336868	50336781	Y	SELO	CRELD2,ALG12,PIM3	NA	NA	NA	NA	PIM3	15293	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.30921820021851
chr22	50341970	50342055	50341995	Y	NA	CRELD2,ALG12,PIM3	NA	NA	NA	NA	PIM3	10106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	50342658	50342932	50342773	Y	NA	CRELD2,ALG12,PIM3	PLXNB2	MCF7	ChIA-PET	22265404	PIM3	9229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.446706585862946
chr22	50344780	50345228	50344944	Y	NA	CRELD2,ALG12,PIM3	PLXNB2	MCF7	ChIA-PET	22265404	PIM3	6933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr22	50345940	50346570	50346146	Y	NA	CRELD2,ALG12,PIM3	PLXNB2	MCF7	ChIA-PET	22265404	PIM3	5591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr22	50364350	50364715	50364589	Y	NA	PIM3	NA	NA	NA	NA	PIM3	12189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.908200637752434
chr22	50609711	50610057	50610042	Y	NA	PANX2,TRABD,SELO	NA	NA	NA	NA	PANX2	2551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	50680113	50680250	50680180	Y	SELO	SELO,TUBGCP6,HDAC10,MAPK12,MAPK11	NA	NA	NA	NA	TUBGCP6	1171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr22	50738042	50738272	50738161	Y	NA	MAPK12,MAPK11,PLXNB2,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	PLXNB2	5784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	50743986	50744741	50744427	Y	PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,CHKB,PLXNB2	MAPK12,MAPK11,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	PLXNB2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.425176343329369
chr22	50744748	50744986	50744827	Y	PIM3,TRABD,TYMP,TYMP,ODF3B,PLXNB2	MAPK12,MAPK11,PLXNB2,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	PLXNB2	692	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.11791445800127
chr22	50747003	50747284	50747232	Y	PIM3,TRABD,HDAC10,TYMP,TYMP,SCO2,SCO2,ODF3B,PLXNB2	MAPK12,MAPK11,PLXNB2,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	PLXNB2	2947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.958495013891697
chr22	50764173	50764461	50764208	Y	NA	PLXNB2,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	XX-C283C717.1	13113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	50769449	50769513	50769481	Y	MOV10L1	PLXNB2,XX-C283C717.1,PPP6R2	PLXNB2,FAM116B	MCF7	ChIA-PET	22265404	PPP6R2	10220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	50784754	50785397	50785059	Y	PPP6R2	PLXNB2,XX-C283C717.1,PPP6R2	NA	NA	NA	NA	PPP6R2	5021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr22	50912071	50912698	50912340	Y	NA	SBF1,ADM2,MIOX,LMF2,NCAPH2	NA	NA	NA	NA	SBF1	617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr22	50977955	50978429	50978214	Y	PANX2,TRABD,HDAC10,CHKB,SCO2,SCO2,TYMP,TYMP,ODF3B	LMF2,NCAPH2,SCO2,TYMP,ODF3B,SYCE3,CHKB-CPT1B	NA	NA	NA	NA	ODF3B	8946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr22	51060079	51060266	51060136	Y	TRABD,SELO,TUBGCP6,HDAC10,PPP6R2,SBF1,NCAPH2,CHKB,ARSA	CHKB-CPT1B,MAPK8IP2,CHKB,ARSA	NA	NA	NA	NA	ARSA	4341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr22	51080489	51080596	51080545	Y	NA	MAPK8IP2,CHKB,ARSA,SHANK3	SHANK3,LOC100144603,CHKB-CPT1B,ARSA,NCAPH2,LMF2,PPP6R2,SBF1	IMR90	Hi-C	24141950	ARSA	15882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.372584957287902
chr22	51109717	51110004	51109850	Y	MAPK11,FAM116B,PPP6R2,MAPK8IP2,MAPK8IP2,SHANK3	ARSA,SHANK3	SHANK3,LMF2,NCAPH2,MAPK8IP2,CHKB-CPT1B,ARSA,SBF1,PPP6R2,ODF3B,SYCE3,KLHDC7B,TYMP,LOC100144603	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SHANK3	839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr22	51138872	51139009	51138949	Y	SELO	SHANK3	NA	NA	NA	NA	SHANK3	28029	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.45598709045898
chr3	3177157	3177268	3177188	Y	CRBN	TRNT1,CRBN	NA	NA	NA	NA	TRNT1	10557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	4435847	4436001	4435932	Y	NA	NA	NA	NA	NA	NA	SUMF1	70964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	4575529	4575739	4575617	Y	NA	ITPR1-AS1,ITPR1	NA	NA	NA	NA	ITPR1	42497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	4793961	4794169	4794077	Y	EDEM1,BHLHE40	EGOT	NA	NA	NA	NA	EGOT	2687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr3	4851245	4851552	4851399	Y	NA	NA	NA	NA	NA	NA	EGOT	59971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	4871506	4871670	4871602	Y	ITPR1,BHLHE40,ARL8B	NA	NA	NA	NA	NA	EGOT	80232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	4881719	4881745	4881731	Y	ITPR1	NA	NA	NA	NA	NA	EGOT	90445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	5027453	5027635	5027574	Y	EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	NA	NA	NA	NA	BHLHE40-AS1	7807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	5028534	5029013	5028702	Y	ITPR1,EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	NA	NA	NA	NA	BHLHE40-AS1	8888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	5036570	5037120	5036867	Y	NA	BHLHE40,BHLHE40-AS1	NA	NA	NA	NA	BHLHE40-AS1	16924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	5058332	5058543	5058409	Y	EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40	MCF7,K562	ChIA-PET	22265404	BHLHE40-AS1	38686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	5059566	5059965	5059743	Y	ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	39920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	5065036	5065378	5065161	Y	BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	45390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	5067974	5068590	5068209	Y	EDEM1,ARL8B,BHLHE40	BHLHE40,BHLHE40-AS1	BHLHE40,ITPR1,EGOT	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BHLHE40-AS1	48328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	5181258	5181597	5181446	Y	BHLHE40,ARL8B,EDEM1	ARL8B,AC026202.3,EDEM1	EDEM1	IMR90	Hi-C	24141950	ARL8B	19353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	5182623	5182897	5182737	Y	BHLHE40,ARL8B,EDEM1	ARL8B,AC026202.3,EDEM1	EDEM1	IMR90	Hi-C	24141950	ARL8B	20718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	5237403	5237551	5237430	Y	BHLHE40,ARL8B,EDEM1	AC026202.3,EDEM1	NA	NA	NA	NA	EDEM1	10072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	8003437	8003558	8003498	Y	NA	NA	NA	NA	NA	NA	LMCD1	537835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	8524896	8525313	8525187	Y	LMCD1	LMCD1	NA	NA	NA	NA	LMCD1	16080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	8540908	8541201	8541046	Y	NA	LMCD1	NA	NA	NA	NA	LMCD1	192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	8544131	8544195	8544133	Y	NA	LMCD1	NA	NA	NA	NA	LMCD1	2738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	8754319	8754664	8754531	Y	NA	NA	NA	NA	NA	NA	OXTR	54650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	8781836	8782151	8782020	Y	NA	OXTR	NA	NA	NA	NA	OXTR	27163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	8906303	8906783	8906429	Y	NA	NA	NA	NA	NA	NA	RAD18	96674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	8911307	8911734	8911565	Y	OXTR	NA	NA	NA	NA	NA	RAD18	91723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	8978841	8979048	8978945	Y	NA	RAD18	NA	NA	NA	NA	RAD18	24409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	9422978	9423353	9423146	Y	SETD5,RAD18,THUMPD3	THUMPD3,SRGAP3,RP11-380O24.1,SETD5,SETD5-AS1	NA	NA	NA	NA	SETD5	13946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	9452001	9452408	9452073	Y	MTMR14,SETD5	THUMPD3,SRGAP3,RP11-380O24.1,SETD5,SETD5-AS1	NA	NA	NA	NA	SETD5-AS1	13738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	9904404	9904624	9904511	Y	OGG1,LOC401052,ARPC4,ARPC4,TADA3,RPUSD3,CIDEC,JAGN1,IL17RE,IL17RE,IL17RC,IL17RC,CIDEC,CIDEC	RPUSD3,JAGN1,IL17RE	NA	NA	NA	NA	RPUSD3	20118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr3	9995528	9995903	9995716	Y	NA	IL17RC,CRELD1,PRRT3-AS1,EMC3-AS1	NA	NA	NA	NA	PRRT3-AS1	8440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	10215234	10216150	10215734	Y	NA	VHL,IRAK2	NA	NA	NA	NA	IRAK2	10685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	10229832	10229943	10229888	Y	NA	VHL,IRAK2	NA	NA	NA	NA	IRAK2	25283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	10233695	10234220	10233931	Y	VHL,IRAK2,TATDN2	IRAK2	NA	NA	NA	NA	IRAK2	29146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	10240437	10240684	10240523	Y	ARPC4,VHL,IRAK2,TATDN2	IRAK2,TATDN2	NA	NA	NA	NA	IRAK2	35888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	10276652	10276834	10276729	Y	NA	TATDN2	NA	NA	NA	NA	TATDN2	10873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	10545766	10546079	10546034	Y	SLC6A1,ATP2B2	NA	NA	NA	NA	NA	SEC13	184904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	11324850	11325078	11324951	Y	HRH1,ATG7	ATG7	NA	NA	NA	NA	ATG7	12855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	11632872	11633201	11633091	Y	SYN2,VGLL4	NA	NA	NA	NA	NA	VGLL4	127019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	11759856	11760132	11759896	Y	NA	VGLL4	NA	NA	NA	NA	VGLL4	88	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	11812040	11812191	11812115	Y	NA	NA	NA	NA	NA	NA	VGLL4	51820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	12350153	12350305	12350183	Y	NA	PPARG	NA	NA	NA	NA	PPARG	23286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	12555203	12555562	12555379	Y	NA	TSEN2,MKRN2	NA	NA	NA	NA	TSEN2	31272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	12584271	12584371	12584321	Y	NA	MKRN2	NA	NA	NA	NA	MKRN2	12142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	12621651	12621927	12621686	Y	RPL32	MKRN2	NA	NA	NA	NA	MKRN2	25138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	12688995	12689498	12689361	Y	RAF1	RAF1	NA	NA	NA	NA	RAF1	14227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	12723455	12723677	12723573	Y	RAF1	RAF1	TMEM40,RAF1,MKRN2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RAF1	19730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	13035460	13035932	13035883	Y	CAND2,IQSEC1,HDAC11,HDAC11,IQSEC1	NA	NA	NA	NA	NA	IQSEC1	76685	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.43231993576796
chr3	13087949	13088097	13088023	Y	RPL32,IQSEC1	IQSEC1	NA	NA	NA	NA	IQSEC1	24520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	13153880	13154026	13153953	Y	NA	IQSEC1	LOC285375,NUP210,HDAC11	IMR90	Hi-C	24141950	IQSEC1	41263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	13231333	13231490	13231397	Y	NA	NA	LOC285375	IMR90	Hi-C	24141950	IQSEC1	118716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	13305478	13305792	13305632	Y	NA	NA	NUP210	IMR90	Hi-C	24141950	NUP210	154017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.742701473990851
chr3	13325256	13325344	13325300	Y	NA	NA	NUP210,LOC285375	IMR90	Hi-C	24141950	NUP210	134465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr3	13455554	13455885	13455702	Y	NUP210	NUP210	NA	NA	NA	NA	NUP210	3924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	13460446	13460799	13460651	Y	NA	NUP210	NA	NA	NA	NA	NUP210	637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr3	13493281	13493606	13493395	Y	NA	NUP210,HDAC11,HDAC11-AS1	IQSEC1,NUP210	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HDAC11	25618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.537592494877212
chr3	13526767	13526807	13526787	Y	NA	HDAC11,HDAC11-AS1	NA	NA	NA	NA	HDAC11-AS1	7214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr3	14167210	14167731	14167391	Y	TMEM43,XPC	CHCHD4,TMEM43,AC093495.4	NA	NA	NA	NA	TMEM43	2770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr3	14444961	14445761	14445267	Y	C3orf19,SLC6A6	SLC6A6	NA	NA	NA	NA	SLC6A6	2885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	14845285	14845503	14845389	Y	NA	NA	NA	NA	NA	NA	NR2C2	141588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr3	15060728	15061023	15060876	Y	NR2C2	MRPS25	NA	NA	NA	NA	MRPS25	43819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	15105615	15105982	15105798	Y	NA	MRPS25,ZFYVE20	NA	NA	NA	NA	MRPS25	773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	15443040	15443420	15443273	Y	ANKRD28,METTL6,EAF1,COLQ,SH3BP5,SH3BP5	EAF1,METTL6	NA	NA	NA	NA	EAF1	23442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	15453852	15454017	15453935	Y	NA	EAF1,METTL6	NA	NA	NA	NA	EAF1	12845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	15704167	15704382	15704274	Y	ANKRD28,CAPN7	NA	NA	NA	NA	NA	HACL1	62829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	15712856	15713111	15712984	Y	NA	NA	NA	NA	NA	NA	HACL1	71518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	15780032	15780074	15780052	Y	SH3BP5,EAF1	NA	BTD	IMR90	Hi-C	24141950	ANKRD28	119204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	15835826	15836097	15835987	Y	SH3BP5,SH3BP5,EAF1,COLQ,DPH3,ANKRD28	NA	NA	NA	NA	NA	ANKRD28	63181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	15901875	15902313	15902310	Y	METTL6,ANKRD28	ANKRD28	NA	NA	NA	NA	ANKRD28	2597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	16101834	16102183	16102049	Y	NA	NA	GALNTL2,BTD,OXNAD1,DPH3,ANKRD28	IMR90	Hi-C	24141950	DPH3	202296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr3	16145048	16145389	16145286	Y	NA	NA	GALNTL2,ANKRD28,DPH3,OXNAD1	IMR90	Hi-C	24141950	DPH3	159090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	16324333	16324353	16324342	Y	NA	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	19627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr3	16352603	16353027	16352777	Y	RFTN1,OXNAD1	DPH3,OXNAD1	NA	NA	NA	NA	OXNAD1	47897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	16373323	16373612	16373405	Y	ANKRD28,OXNAD1	NA	NA	NA	NA	NA	OXNAD1	68617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	16550067	16550455	16550405	Y	PLCL2,OXNAD1,RFTN1	NA	NA	NA	NA	NA	OXNAD1	245361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	17345014	17345355	17345310	Y	TBC1D5,TBC1D5	NA	NA	NA	NA	NA	OXNAD1	1040308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	17404652	17404912	17404782	Y	NA	NA	NA	NA	NA	NA	TBC1D5	1079397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	17441926	17442172	17442040	Y	PLCL2	NA	NA	NA	NA	NA	TBC1D5	1042137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	17506581	17506846	17506713	Y	TBC1D5	NA	NA	NA	NA	NA	TBC1D5	977463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	17542863	17543019	17542979	Y	NA	NA	NA	NA	NA	NA	TBC1D5	941290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	17543312	17543623	17543461	Y	NA	NA	NA	NA	NA	NA	TBC1D5	940686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	17789149	17789293	17789231	Y	NA	NA	TBC1D5	MCF7	ChIA-PET	22265404	TBC1D5	695016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr3	17913596	17913897	17913750	Y	NA	NA	NA	NA	NA	NA	TBC1D5	570412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	18140643	18140862	18140682	Y	NA	NA	NA	NA	NA	NA	TBC1D5	343447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	18485117	18485365	18485120	Y	NA	TBC1D5	NA	NA	NA	NA	TBC1D5	808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	18580242	18580387	18580280	Y	NA	RAD23BP1	NA	NA	NA	NA	RAD23BP1	2077	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05250108740795
chr3	19379484	19379512	19379499	Y	KCNH8	NA	NA	NA	NA	NA	EFHB	607005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	19993428	19993925	19993635	Y	KAT2B,RAB5A	EFHB,RAB5A,RNU4-85P	NA	NA	NA	NA	RAB5A	6857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr3	20122748	20122899	20122825	Y	NA	KAT2B	NA	NA	NA	NA	KAT2B	43233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	20190984	20191185	20191115	Y	SGOL1,SGOL1	SGOL1	NA	NA	NA	NA	SGOL1	34599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	20200050	20200329	20200065	Y	NA	SGOL1	NA	NA	NA	NA	SGOL1	25455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	20201632	20201832	20201780	Y	KAT2B	SGOL1	NA	NA	NA	NA	SGOL1	23952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	20361977	20362317	20362175	Y	NA	NA	NA	NA	NA	NA	SGOL1	136193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.365682594643304
chr3	22039046	22039346	22039196	Y	NA	NA	NA	NA	NA	NA	HMGB1P5	381964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	24370369	24370393	24370381	Y	NA	NA	NA	NA	NA	NA	THRB	164380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	24459735	24459834	24459785	Y	NA	NA	NA	NA	NA	NA	THRB	74939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	24492184	24492324	24492254	Y	NA	THRB	NA	NA	NA	NA	THRB	42449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.406274639125506
chr3	24506233	24506581	24506477	Y	NA	THRB	NA	NA	NA	NA	THRB	28192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	24525285	24525656	24525591	Y	NA	THRB	NA	NA	NA	NA	THRB	9117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	24545123	24545400	24545272	Y	NA	THRB	NA	NA	NA	NA	THRB	10350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	24563741	24564038	24564033	Y	NA	THRB	NA	NA	NA	NA	THRB	28968	CAGE	HepG2 ENCODE	hg19	FANTOM5	7.11049348103874
chr3	25767387	25767675	25767610	Y	NA	NA	NA	NA	NA	NA	OXSM	54733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	25790563	25790933	25790768	Y	NA	OXSM,NGLY1	NA	NA	NA	NA	OXSM	31475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr3	25796078	25796406	25796226	Y	NGLY1	OXSM,NGLY1	NA	NA	NA	NA	OXSM	26002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr3	27448460	27448581	27448568	Y	NA	NEK10	NEK10	IMR90	Hi-C	24141950	NEK10	39509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	27524458	27524952	27524717	Y	NA	SLC4A7,RNU1-96P	NA	NA	NA	NA	SLC4A7	547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr3	27575366	27575733	27575573	Y	NA	RNU1-96P	AZI2,SLC4A7,NEK10,EOMES	IMR90	Hi-C	24141950	RNU1-96P	22004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	27674607	27674970	27674793	Y	NA	AC098614.2	SLC4A7,NEK10	IMR90	Hi-C	24141950	AC098614.2	2140	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.05808969249489
chr3	30269318	30269730	30269646	Y	NA	NA	TGFBR2,GADL1	IMR90	Hi-C	24141950	TGFBR2	376264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	30389148	30389362	30389271	Y	TGFBR2	NA	TGFBR2	IMR90	Hi-C	24141950	TGFBR2	256632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	30646968	30647109	30647039	Y	TGFBR2	TGFBR2	NA	NA	NA	NA	TGFBR2	974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.274464645594328
chr3	30700179	30700500	30700249	Y	TGFBR2	NA	NA	NA	NA	NA	TGFBR2	54185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	30723230	30723490	30723363	Y	TGFBR2	NA	NA	NA	NA	NA	TGFBR2	77236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr3	31149741	31150063	31149903	Y	NA	NA	NA	NA	NA	NA	STT3B	422067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	31267763	31268179	31268080	Y	STT3B	NA	GADL1	IMR90	Hi-C	24141950	STT3B	303951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	31268600	31269021	31268879	Y	NA	NA	GADL1	IMR90	Hi-C	24141950	STT3B	303109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	31328894	31329155	31329025	Y	NA	NA	GADL1	IMR90	Hi-C	24141950	STT3B	242975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	31690891	31691368	31691073	Y	ZNF860,OSBPL10	NA	NA	NA	NA	NA	STT3B	118761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.153008707637245
chr3	31737462	31737733	31737598	Y	NA	NA	NA	NA	NA	NA	STT3B	165332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	32002546	32002801	32002555	Y	NA	ZNF860	NA	NA	NA	NA	ZNF860	18462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	32443431	32443555	32443473	Y	CMTM7	CMTM7	NA	NA	NA	NA	CMTM7	12268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	32453477	32453643	32453560	Y	NA	CMTM7	NA	NA	NA	NA	CMTM7	22314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	32461951	32462075	32462013	Y	CMTM7	CMTM7	NA	NA	NA	NA	CMTM7	30788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr3	32499535	32499861	32499683	Y	CCR4,CMTM7	CMTM6	NA	NA	NA	NA	CMTM6	43039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	32526070	32526309	32526138	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	16591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	32535422	32535827	32535806	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	7073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	32549205	32549429	32549313	Y	NA	CMTM6	NA	NA	NA	NA	CMTM6	6305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.304543048364871
chr3	32822383	32822764	32822428	Y	TRIM71	AC139452.2,TRIM71	NA	NA	NA	NA	AC139452.2	2374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.983476437747573
chr3	32823053	32823413	32823146	Y	NA	AC139452.2,TRIM71	NA	NA	NA	NA	AC139452.2	1725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.250797490903309
chr3	32836613	32836654	32836634	Y	NA	AC139452.2,TRIM71	NA	NA	NA	NA	AC139452.2	11475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	32857811	32858132	32857909	Y	NA	AC139452.2,TRIM71	NA	NA	NA	NA	TRIM71	301	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.20525991027412
chr3	32863625	32863886	32863704	Y	NA	AC139452.2,TRIM71	NA	NA	NA	NA	TRIM71	6115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	33060795	33061128	33060939	Y	CCR4	SEC13P1	NA	NA	NA	NA	SEC13P1	12227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	33081513	33081785	33081661	Y	NA	SEC13P1	NA	NA	NA	NA	SEC13P1	8158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	33089398	33089551	33089467	Y	CCR4	SEC13P1,TMPPE,GLB1	NA	NA	NA	NA	SEC13P1	16043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	33436260	33436332	33436276	Y	CLASP2,FBXL2,FBXL2	UBP1	NA	NA	NA	NA	UBP1	44531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	33590851	33591213	33591209	Y	NA	NA	NA	NA	NA	NA	UBP1	109988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	33638872	33639200	33639124	Y	NA	NA	NA	NA	NA	NA	CLASP2	118648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	33837400	33837658	33837523	Y	CLASP2,PDCD6IP	PDCD6IP	NA	NA	NA	NA	PDCD6IP	186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	36937540	36937792	36937666	Y	NA	TRANK1	NA	NA	NA	NA	TRANK1	46756	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	37164159	37164535	37164493	Y	NA	NA	MLH1	IMR90	Hi-C	24141950	LRRFIP2	58645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	37218637	37218971	37218954	Y	DCLK3,TRANK1,C3orf35	LRRFIP2	MLH1	IMR90	Hi-C	24141950	LRRFIP2	4209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	37259018	37259236	37259127	Y	NA	LRRFIP2,GOLGA4,AC097359.1	LRRFIP2,MLH1,EPM2AIP1	IMR90	Hi-C	24141950	GOLGA4	23432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr3	37344922	37345358	37345096	Y	NA	NA	NA	NA	NA	NA	AC097359.1	61236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	37901883	37902306	37902042	Y	CTDSPL	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	432	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.61721242990568
chr3	37904355	37904605	37904570	Y	NA	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	2904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr3	37939195	37939560	37939378	Y	NA	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	37744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	37949474	37949626	37949550	Y	SLC22A14	AC093415.2,CTDSPL	NA	NA	NA	NA	CTDSPL	48023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15416287905734
chr3	38046580	38046956	38046768	Y	SLC22A14	PLCD1	NA	NA	NA	NA	PLCD1	22297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	38209266	38209592	38209336	Y	VILL,PLCD1,SLC22A14,ACAA1,MYD88,OXSR1	ACAA1,MYD88,OXSR1	NA	NA	NA	NA	OXSR1	4686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	38227489	38227608	38227524	Y	NA	MYD88,OXSR1	NA	NA	NA	NA	OXSR1	22909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	38497232	38497482	38497354	Y	NA	ACVR2B,EXOG	NA	NA	NA	NA	ACVR2B	3890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.245540414243879
chr3	38568637	38569221	38568871	Y	SCN10A,SCN11A,SLC22A14,EXOG	EXOG	NA	NA	NA	NA	EXOG	33019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	39191403	39191804	39191748	Y	NA	TTC21A,GORASP1,CSRNP1	NA	NA	NA	NA	CSRNP1	2249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	39193999	39194528	39194467	Y	NA	TTC21A,GORASP1	NA	NA	NA	NA	CSRNP1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr3	39399859	39400185	39399921	Y	CCR8,SLC25A38	SLC25A38,RPSA	NA	NA	NA	NA	SLC25A38	22654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr3	40348191	40348315	40348238	Y	NA	EIF1B	NA	NA	NA	NA	EIF1B	860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	40491258	40491489	40491375	Y	NA	ENTPD3-AS1,RPL14,ZNF619	NA	NA	NA	NA	ENTPD3-AS1	1331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	41158856	41159369	41159156	Y	NA	NA	ULK4	IMR90	Hi-C	24141950	CTNNB1	74959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	41307391	41307696	41307531	Y	NA	NA	NA	NA	NA	NA	CTNNB1	73063	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.16311185522586
chr3	41404443	41404837	41404640	Y	NA	NA	NA	NA	NA	NA	CTNNB1	170115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	42002407	42002746	42002471	Y	ULK4	RPL36P20,ULK4	NA	NA	NA	NA	ULK4	485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	42220925	42221235	42221114	Y	TRAK1	RNU4-78P	NA	NA	NA	NA	RNU4-78P	40097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr3	42864988	42865260	42865043	Y	NA	HIGD1A	NA	NA	NA	NA	HIGD1A	20965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr3	42922564	42922793	42922612	Y	C3orf39	CYP8B1	NA	NA	NA	NA	CYP8B1	6931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	43368782	43368949	43368860	Y	NA	SNRK	NA	NA	NA	NA	SNRK	42778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	43427917	43428246	43428244	Y	NA	NA	NA	NA	NA	NA	RP11-353H3.1	97126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	44621262	44622718	44622436	Y	NA	ZNF660,ZNF197	NA	NA	NA	NA	ZNF197	1662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr3	44643970	44644223	44644141	Y	ZNF445,ZNF660,ZNF35,ZNF197	ZNF660,ZNF197	NA	NA	NA	NA	ZNF197	19590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	44652575	44652865	44652702	Y	ZNF445,ZNF502,ZNF501,ZNF167,ZNF660,ZNF197	ZNF660,ZNF197	NA	NA	NA	NA	ZNF197	28195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	45035735	45035877	45035806	Y	ZNF660,ZNF35	EXOSC7,ZDHHC3	NA	NA	NA	NA	ZDHHC3	20058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	45138887	45139080	45139004	Y	NA	CDCP1	NA	NA	NA	NA	CDCP1	46834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	45161726	45162069	45161866	Y	TMEM158	CDCP1,RPS24P8	NA	NA	NA	NA	CDCP1	23845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	45175300	45175656	45175542	Y	NA	CDCP1,RPS24P8	NA	NA	NA	NA	CDCP1	10258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	45587097	45587360	45587213	Y	LIMD1	LIMD1	NA	NA	NA	NA	LIMD1	7526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	45609249	45609611	45609389	Y	LIMD1	LIMD1	NA	NA	NA	NA	LIMD1	14363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	45657242	45657607	45657425	Y	NA	NA	NA	NA	NA	NA	LIMD1	62356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	46035131	46035483	46035399	Y	CCR5,SACM1L,CXCR6,FYCO1	NA	NA	NA	NA	NA	FYCO1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	46036343	46036779	46036493	Y	CCR5,CCR2,SACM1L,CXCR6,FYCO1	FYCO1	NA	NA	NA	NA	FYCO1	1027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	46587372	46587917	46587474	Y	NA	LRRC2	NA	NA	NA	NA	LRRC2	31672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	46600040	46600219	46600077	Y	NA	LRRC2	NA	NA	NA	NA	LRRC2	19370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.554026270103322
chr3	46971519	46971826	46971651	Y	SETD2,KLHL18,NBEAL2,CCDC12	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	47347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	46973216	46973514	46973421	Y	KLHL18,NBEAL2	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	45659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	46988775	46989017	46988932	Y	SETD2,KLHL18,KIF9,NBEAL2,CCDC12	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	30156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	46989533	46989702	46989634	Y	SETD2,KLHL18,NBEAL2,CCDC12	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	29471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	46989736	46990203	46989983	Y	SETD2,KLHL18,NBEAL2,CCDC12	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	28970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15383135062983
chr3	47000781	47001063	47000953	Y	SETD2,KLHL18,NBEAL2,CCDC12	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	18110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	47002825	47003246	47003204	Y	NA	NBEAL2,CCDC12	NA	NA	NA	NA	NBEAL2	15927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	47120016	47120037	47120026	Y	SETD2,KLHL18,PRSS45,CCDC12	NA	NA	NA	NA	NA	SETD2	83420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	47204029	47204492	47204291	Y	NA	SETD2,KIF9-AS1	NA	NA	NA	NA	KIF9-AS1	42	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	47420724	47420876	47420775	Y	NA	PTPN23	NA	NA	NA	NA	PTPN23	223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	47421570	47421869	47421711	Y	NA	PTPN23	NA	NA	NA	NA	PTPN23	1069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr3	47466111	47466297	47466204	Y	NA	PTPN23	NA	NA	NA	NA	PTPN23	45610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr3	47584263	47584567	47584468	Y	NA	CSPG5	NA	NA	NA	NA	CSPG5	35715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr3	47704557	47705253	47705047	Y	SETD2	NA	NA	NA	NA	NA	CSPG5	84275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr3	47898226	47898293	47898260	Y	NA	NA	NA	NA	NA	NA	DHX30	55827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	47991974	47992099	47992083	Y	CCDC51,ATRIP,SMARCC1,CDC25A	NA	NA	NA	NA	NA	MAP4	136670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.694052895443956
chr3	48128782	48129302	48129029	Y	NA	MAP4,RP11-1029M24.1	NA	NA	NA	NA	MAP4	13	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189497846880113
chr3	48332679	48332937	48332732	Y	SPINK8	NME6	NA	NA	NA	NA	NME6	8238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	48469321	48469953	48469633	Y	NA	CCDC51,ATRIP	NA	NA	NA	NA	PLXNB1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	48967045	48967316	48967140	Y	NA	SLC25A20,ARIH2	NA	NA	NA	NA	ARIH2	12791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	49105949	49106080	49106015	Y	ARIH2	DALRD3,IMPDH2,QRICH1,QARS	NA	NA	NA	NA	QRICH1	23716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	49123301	49123671	49123633	Y	NA	QRICH1,QARS,USP19,LAMB2	NA	NA	NA	NA	QRICH1	6125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr3	49171125	49171202	49171164	Y	NA	QRICH1,QARS,USP19,LAMB2,CCDC71,KLHDC8B	NA	NA	NA	NA	LAMB2	2574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	49358291	49358883	49358713	Y	ARIH2,C3orf71,NDUFAF3,DALRD3,QRICH1,USP19,UBA7,IP6K1,USP4	USP4,GPX1	NA	NA	NA	NA	USP4	17262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	49503154	49503264	49503210	Y	NA	AMT,NICN1,DAG1	NA	NA	NA	NA	DAG1	882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.449334612585461
chr3	49696171	49696492	49696217	Y	NA	APEH,RNF123,MST1	APEH,MST1,RNF123	IMR90	Hi-C	24141950	APEH	12943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	49968490	49968553	49968522	Y	NA	MON1A,RBM6	NA	NA	NA	NA	MON1A	2884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	50194710	50194859	50194796	Y	TUSC2,HYAL2,GMPPB,C3orf54,MST1R,MON1A,IFRD2,SEMA3F	SEMA3F,RP11-493K19.3,SLC38A3	NA	NA	NA	NA	RP11-493K19.3	3192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	50204844	50205012	50204945	Y	NA	SEMA3F,RP11-493K19.3,SLC38A3	NA	NA	NA	NA	RP11-493K19.3	13326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	50239388	50239565	50239461	Y	HYAL1,SLC38A3	SEMA3F,RP11-493K19.3,SLC38A3,GNAI2	NA	NA	NA	NA	SLC38A3	1114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.669402488408391
chr3	50243484	50243685	50243589	Y	HYAL1,SLC38A3	SLC38A3,GNAI2	NA	NA	NA	NA	SLC38A3	2805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.387703951741955
chr3	50246310	50246610	50246523	Y	HYAL1,SEMA3B	SLC38A3,GNAI2	NA	NA	NA	NA	SLC38A3	5631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.415313913927546
chr3	50264852	50265230	50265012	Y	TUSC2,IP6K1,GNAI2,GNAI2	SLC38A3,GNAI2,SEMA3B-AS1,SEMA3B	NA	NA	NA	NA	GNAI2	3128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr3	50302065	50302532	50302296	Y	SEMA3B	GNAI2,SEMA3B-AS1,SEMA3B,IFRD2,NAT6,HYAL3,HYAL1	NA	NA	NA	NA	SEMA3B-AS1	271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	50370591	50370860	50370724	Y	RBM6,SEMA3B,RASSF1	IFRD2,NAT6,HYAL3,HYAL1,HYAL2,TUSC2,RASSF1,CYB561D2,NPRL2,TMEM115	NA	NA	NA	NA	RASSF1	5551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	50625949	50626261	50626110	Y	RBM5,RASSF1,RASSF1,CACNA2D2	HEMK1,C3orf18,MAPKAPK3,CISH	NA	NA	NA	NA	C3orf18	19491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr3	50638353	50638905	50638586	Y	MAPKAPK3,CISH	HEMK1,C3orf18,MAPKAPK3,CISH	NA	NA	NA	NA	MAPKAPK3	8046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.423862074164511
chr3	50639346	50639782	50639525	Y	C3orf18,HEMK1,MAPKAPK3,CISH	HEMK1,C3orf18,MAPKAPK3,CISH	NA	NA	NA	NA	MAPKAPK3	7169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr3	50664800	50665228	50664999	Y	GNAI2,MAPKAPK3	MAPKAPK3,CISH	NA	NA	NA	NA	CISH	17538	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	51377903	51378233	51378113	Y	NA	MANF,RBM15B	NA	NA	NA	NA	MANF	42245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	51506153	51506528	51506417	Y	VPRBP,RAD54L2,GPR62	VPRBP	NA	NA	NA	NA	VPRBP	25482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	51573530	51573858	51573781	Y	VPRBP,RAD54L2	VPRBP	NA	NA	NA	NA	VPRBP	41520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	51628881	51628909	51628894	Y	GPR62	NA	NA	NA	NA	NA	TEX264	65800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr3	51728520	51728585	51728552	Y	NA	TEX264	NA	NA	NA	NA	TEX264	33811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	52009750	52010220	52010093	Y	NA	RRP9,PARP3,PCBP4,ABHD14A,ABHD14A-ACY1,ACY1,ABHD14B,RPL29	NA	NA	NA	NA	ABHD14A-ACY1,ACY1	2684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	52073968	52074235	52074157	Y	GPR62	RPL29,DUSP7	NA	NA	NA	NA	DUSP7	14331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr3	52080287	52080923	52080751	Y	NT5DC2,TWF2,DUSP7	DUSP7	NA	NA	NA	NA	DUSP7	7643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr3	52091161	52091675	52091445	Y	TWF2,DUSP7	DUSP7	NA	NA	NA	NA	DUSP7	2595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	52143667	52143964	52143845	Y	NA	POC1A	NA	NA	NA	NA	POC1A	42742	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	52287340	52287625	52287477	Y	PBRM1,NISCH,WDR82,GLYCTK,PPM1M,PPM1M	RP5-1157M23.2,TWF2,PPM1M,GLYCTK,WDR82	NA	NA	NA	NA	PPM1M	9499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	52334165	52334539	52334405	Y	NA	GLYCTK,WDR82	NA	NA	NA	NA	WDR82	14129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	52503087	52503472	52503331	Y	ABHD14B,NISCH	SEMA3G,TNNC1,NISCH	NA	NA	NA	NA	NISCH	15953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	52652258	52652629	52652403	Y	GLYCTK,MUSTN1,GLT8D1	NA	NA	NA	NA	NA	GNL3	60543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	53106812	53106929	53106871	Y	TMEM110,SFMBT1	SFMBT1	NA	NA	NA	NA	SFMBT1	28046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr3	53107324	53107487	53107433	Y	TMEM110,SFMBT1,SFMBT1,DCP1A	SFMBT1	NA	NA	NA	NA	SFMBT1	28558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.336918461037618
chr3	53136597	53136930	53136874	Y	PBRM1,PBRM1,TMEM110,DCP1A,PRKCD	RFT1	NA	NA	NA	NA	RFT1	25548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	53203443	53203654	53203536	Y	PBRM1,GLT8D1,DCP1A,PRKCD	RFT1,PRKCD	NA	NA	NA	NA	PRKCD	15418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	53204252	53204625	53204434	Y	PBRM1,TMEM110,DCP1A,PRKCD	RFT1,PRKCD	NA	NA	NA	NA	PRKCD	16227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	53270281	53270430	53270371	Y	PRKCD,DCP1A,TKT	TKT	NA	NA	NA	NA	TKT	17638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr3	53288705	53289353	53289077	Y	NA	TKT	NA	NA	NA	NA	TKT	637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	53304049	53304491	53304265	Y	PRKCD,DCP1A,TKT	TKT	NA	NA	NA	NA	TKT	15981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr3	53362706	53362961	53362819	Y	NA	DCP1A	NA	NA	NA	NA	DCP1A	16693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	53859957	53860202	53860080	Y	CACNA1D,CHDH	CHDH,IL17RB	NA	NA	NA	NA	CHDH	18215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr3	53876999	53877298	53877116	Y	CHDH	CHDH,IL17RB,ACTR8,SELK	NA	NA	NA	NA	CHDH	1119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.404468743788376
chr3	53897423	53897785	53897604	Y	NA	CHDH,IL17RB,ACTR8,SELK	NA	NA	NA	NA	ACTR8	16444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	55224453	55224624	55224517	Y	WNT5A	NA	WNT5A,CACNA2D3,ERC2,C3orf51	IMR90	Hi-C	24141950	RPS15P5	566211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	55364571	55364745	55364625	Y	NA	NA	CACNA2D3,WNT5A,ERC2,C3orf51	IMR90	Hi-C	24141950	RPS15P5	706329	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	55398457	55398867	55398717	Y	NA	NA	CACNA2D3	IMR90	Hi-C	24141950	RPS15P5	740215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	55517501	55517653	55517577	Y	NA	NA	NA	NA	NA	NA	RPS15P5	859259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	55518078	55518594	55518516	Y	WNT5A	NA	NA	NA	NA	NA	RPS15P5	859836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	56814931	56815295	56815113	Y	NA	NA	NA	NA	NA	NA	FAM208A	99666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	56818012	56818198	56818042	Y	CCDC66,C3orf63,ARHGEF3	NA	NA	NA	NA	NA	FAM208A	102747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr3	56822055	56822193	56822075	Y	CCDC66,C3orf63,ARHGEF3	NA	NA	NA	NA	NA	FAM208A	106790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	56895897	56895912	56895905	Y	ASB14	NA	NA	NA	NA	NA	FAM208A	180632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	56925207	56925322	56925265	Y	NA	NA	NA	NA	NA	NA	SPATA12	167147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	57555554	57555589	57555572	Y	FAM116A,PDE12	PDE12,ARF4	NA	NA	NA	NA	PDE12	15551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	57562103	57562255	57562188	Y	SLMAP,FAM116A,APPL1,PDE12	PDE12,ARF4	NA	NA	NA	NA	ARF4	19692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	57564978	57565360	57565163	Y	FAM116A,PDE12	PDE12,ARF4	NA	NA	NA	NA	ARF4	16587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	57566206	57566518	57566262	Y	NA	PDE12,ARF4	NA	NA	NA	NA	ARF4	15429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	57572232	57572342	57572306	Y	NA	PDE12,ARF4	NA	NA	NA	NA	ARF4	9605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	57637831	57638080	57637955	Y	SLMAP,FAM116A,PDE12	RP11-755B10.3	NA	NA	NA	NA	RP11-755B10.3	38852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	57818713	57819025	57818868	Y	NA	NA	NA	NA	NA	NA	SLMAP	79536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	57874517	57874643	57874579	Y	NA	NA	NA	NA	NA	NA	FLNB	117484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	57937235	57937402	57937348	Y	NA	NA	NA	NA	NA	NA	FLNB	54725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	57945627	57945950	57945779	Y	PDE12	FLNB	FLNB,ARF4	IMR90	Hi-C	24141950	FLNB	46177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.416628183092403
chr3	57960548	57960842	57960815	Y	FLNB	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	31285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	57969350	57969849	57969627	Y	PDE12,PXK	FLNB	ARF4,FLNB	IMR90	Hi-C	24141950	FLNB	22278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr3	57995654	57995894	57995762	Y	NA	FLNB	NA	NA	NA	NA	FLNB	3527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	57995926	57996426	57996121	Y	NA	FLNB	NA	NA	NA	NA	FLNB	3799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr3	58035006	58035314	58035102	Y	FLNB	FLNB	NA	NA	NA	NA	FLNB	42879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.27315037642947
chr3	58038147	58038335	58038213	Y	FLNB	FLNB	NA	NA	NA	NA	FLNB	46020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr3	58088809	58088926	58088863	Y	NA	NA	NA	NA	NA	NA	FLNB	96682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.637027075735644
chr3	58159699	58160034	58159862	Y	NA	NA	NA	NA	NA	NA	ABHD6	61199	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr3	58162589	58162663	58162637	Y	KCTD6	NA	NA	NA	NA	NA	ABHD6	58570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	58163548	58163776	58163593	Y	NA	NA	NA	NA	NA	NA	ABHD6	57457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr3	58192298	58192649	58192549	Y	NA	ABHD6	NA	NA	NA	NA	ABHD6	28584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	58336517	58336871	58336595	Y	PXK	RPP14,PXK	NA	NA	NA	NA	PXK	19910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	58339773	58340193	58340113	Y	NA	RPP14,PXK	NA	NA	NA	NA	PXK	23166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	58457172	58457525	58457255	Y	RPP14,RPP14,KCTD6	PDHB,KCTD6	PXK,RPP14,KCTD6,ACOX2,PDHB	IMR90	Hi-C	24141950	KCTD6	18316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.278247355344137
chr3	59939589	59939967	59939778	Y	NA	NA	NA	NA	NA	NA	FHIT	1295166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	60018233	60018421	60018327	Y	NA	NA	NA	NA	NA	NA	FHIT	1216712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	60360991	60361355	60361182	Y	NA	NA	NA	NA	NA	NA	FHIT	873778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	60392594	60392829	60392710	Y	NA	NA	NA	NA	NA	NA	FHIT	842304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	60501466	60501824	60501659	Y	NA	NA	NA	NA	NA	NA	FHIT	733309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr3	60654100	60654144	60654124	Y	NA	NA	NA	NA	NA	NA	FHIT	580989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr3	60695765	60695821	60695814	Y	NA	NA	NA	NA	NA	NA	FHIT	539312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	60715683	60716344	60716091	Y	NA	NA	NA	NA	NA	NA	FHIT	518789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.364036797050936
chr3	60804439	60804744	60804592	Y	FHIT	NA	NA	NA	NA	NA	FHIT	430389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	61667893	61667951	61667922	Y	NA	NA	NA	NA	NA	NA	RPL10AP6	58829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	61828479	61828865	61828501	Y	PTPRG	NA	NA	NA	NA	NA	RPL10AP6	101699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	63848274	63848561	63848418	Y	NA	THOC7,ATXN7	NA	NA	NA	NA	ATXN7	41	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	65694421	65694810	65694689	Y	NA	NA	NA	NA	NA	NA	MAGI1	327699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	65744738	65744801	65744770	Y	NA	NA	NA	NA	NA	NA	MAGI1	277708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	65939140	65939412	65939262	Y	MAGI1	NA	NA	NA	NA	NA	MAGI1	83097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	66021951	66022397	66022084	Y	NA	MAGI1	NA	NA	NA	NA	MAGI1	112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr3	66022863	66023161	66022996	Y	MAGI1	MAGI1	NA	NA	NA	NA	MAGI1	354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.219736347395419
chr3	66295672	66296073	66295873	Y	NA	NA	NA	NA	NA	NA	SLC25A26	178387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	66549724	66550124	66549864	Y	NA	LRIG1	NA	NA	NA	NA	LRIG1	37	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr3	67512199	67512308	67512254	Y	NA	NA	NA	NA	NA	NA	SUCLG2	190730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	69131956	69132274	69132164	Y	TMF1,ARL6IP5	TMF1,UBA3	NA	NA	NA	NA	ARL6IP5	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	69134869	69134938	69134904	Y	TMF1	TMF1,UBA3,ARL6IP5	NA	NA	NA	NA	ARL6IP5	2774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	69135158	69135511	69135504	Y	NA	TMF1,UBA3,ARL6IP5	NA	NA	NA	NA	ARL6IP5	3063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	69698353	69698679	69698548	Y	NA	NA	MITF	IMR90	Hi-C	24141950	MITF	87907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	69790676	69790712	69790690	Y	MITF	MITF	NA	NA	NA	NA	MITF	4090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	70175230	70175612	70175604	Y	NA	NA	NA	NA	NA	NA	MITF	388644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71109660	71109993	71109875	Y	NA	NA	NA	NA	NA	NA	FOXP1	521147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71136796	71137147	71137136	Y	FOXP1	NA	NA	NA	NA	NA	FOXP1	493993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71137411	71137566	71137489	Y	FOXP1	NA	NA	NA	NA	NA	FOXP1	493574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71150221	71150629	71150383	Y	NA	NA	NA	NA	NA	NA	FOXP1	480511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	71256015	71256172	71256059	Y	NA	NA	NA	NA	NA	NA	FOXP1	374968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71267437	71267786	71267612	Y	NA	NA	NA	NA	NA	NA	FOXP1	363354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71293394	71293605	71293527	Y	NA	NA	NA	NA	NA	NA	FOXP1	337535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71439009	71439199	71439166	Y	NA	NA	NA	NA	NA	NA	FOXP1	191941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	71447361	71447554	71447492	Y	EIF4E3	NA	NA	NA	NA	NA	FOXP1	183586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71465988	71466289	71466193	Y	NA	NA	NA	NA	NA	NA	FOXP1	164851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71538205	71538976	71538530	Y	EIF4E3	NA	NA	NA	NA	NA	FOXP1	92164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71564915	71565059	71565002	Y	PROK2,GPR27,FOXP1,EIF4E3,EIF4E3,EIF4E3	NA	NA	NA	NA	NA	FOXP1	66081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	71588104	71588187	71588146	Y	NA	FOXP1	NA	NA	NA	NA	FOXP1	42953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	71628462	71628802	71628743	Y	NA	FOXP1	NA	NA	NA	NA	FOXP1	2338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	71628829	71629563	71629383	Y	EIF4E3	FOXP1	NA	NA	NA	NA	FOXP1	1577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.245540414243879
chr3	71634476	71634568	71634542	Y	NA	FOXP1	NA	NA	NA	NA	FOXP1	3336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	71863099	71863325	71863212	Y	NA	NA	NA	NA	NA	NA	EIF4E3	61175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	72131450	72132110	72131789	Y	RYBP,FOXP1,EIF4E3,GPR27,EIF4E3,EIF4E3,PROK2	NA	NA	NA	NA	NA	LINC00870	66298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	72194016	72194307	72194162	Y	RYBP,EIF4E3,GPR27,EIF4E3,EIF4E3	LINC00870	NA	NA	NA	NA	LINC00870	4101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	72445751	72445968	72445860	Y	NA	RYBP	NA	NA	NA	NA	RYBP	48101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	72640026	72640175	72640110	Y	NA	NA	NA	NA	NA	NA	RYBP	145957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.425998986321953
chr3	72862614	72863000	72862807	Y	SHQ1	SHQ1	NA	NA	NA	NA	SHQ1	46065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	72871393	72871600	72871481	Y	RYBP,PPP4R2	SHQ1	NA	NA	NA	NA	SHQ1	37465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	72977666	72978074	72977791	Y	RYBP	GXYLT2,FTH1P23	NA	NA	NA	NA	FTH1P23	1471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	73022372	73022552	73022446	Y	PPP4R2,EBLN2	FTH1P23,PPP4R2	NA	NA	NA	NA	PPP4R2	21384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	73040663	73040928	73040772	Y	NA	PPP4R2	NA	NA	NA	NA	PPP4R2	3008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	73049169	73049333	73049244	Y	PPP4R2,EBLN2	PPP4R2	NA	NA	NA	NA	PPP4R2	5233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	73159773	73160145	73159855	Y	EBLN2	NA	PDZRN3,CACNA1D	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CCDC75P1	70297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	73697614	73697785	73697708	Y	NA	PDZRN3	NA	NA	NA	NA	PDZRN3	25523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	76160921	76161072	76160934	Y	NA	NA	NA	NA	NA	NA	RP11-550F7.1	320097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	77239163	77239286	77239225	Y	ROBO2,ROBO2	NA	NA	NA	NA	NA	RP11-550F7.1	757994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	77273270	77273652	77273462	Y	ROBO2,ROBO2	NA	NA	NA	NA	NA	RP11-550F7.1	792101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	78848211	78848429	78848320	Y	NA	NA	NA	NA	NA	NA	ROBO1	966536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	78867121	78867519	78867219	Y	NA	NA	NA	NA	NA	NA	ROBO1	947446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	78881449	78881566	78881507	Y	NA	NA	NA	NA	NA	NA	ROBO1	933399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	78934560	78934824	78934693	Y	NA	NA	NA	NA	NA	NA	ROBO1	880141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.657734675276636
chr3	79013956	79013976	79013966	Y	NA	NA	NA	NA	NA	NA	ROBO1	800989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	79674571	79674688	79674630	Y	ROBO1	NA	NA	NA	NA	NA	ROBO1	140277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	87101402	87101690	87101545	Y	NA	NA	NA	NA	NA	NA	CHMP2B	172731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	88208920	88209337	88209164	Y	CGGBP1,C3orf38	C3orf38,CGGBP1	NA	NA	NA	NA	CGGBP1	11885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	88367245	88367614	88367269	Y	NA	ABCF2P1	NA	NA	NA	NA	ABCF2P1	2939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	96336052	96336669	96336607	Y	NA	NA	NA	NA	NA	NA	HNRNPKP4	269654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.373567698025248
chr3	97508761	97509065	97508913	Y	NA	ARL6	NA	NA	NA	NA	ARL6	27396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	98044011	98044208	98044126	Y	NA	NA	GABRR3	IMR90	Hi-C	24141950	CLDND1	195702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	98449231	98449446	98449340	Y	ST3GAL6	NA	NA	NA	NA	NA	CPOX	138664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	98497643	98498236	98497973	Y	ST3GAL6	NA	NA	NA	NA	NA	DCBLD2	120297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	98504725	98505044	98504856	Y	OR5K4,ST3GAL6	NA	NA	NA	NA	NA	DCBLD2	113489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr3	98505158	98505735	98505540	Y	ST3GAL6	NA	NA	NA	NA	NA	DCBLD2	112798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr3	98509261	98509585	98509483	Y	NA	NA	NA	NA	NA	NA	DCBLD2	108948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr3	98544884	98545154	98545150	Y	NA	NA	NA	NA	NA	NA	DCBLD2	73379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	98681428	98681771	98681644	Y	DCBLD2	LINC00973	MIR548G,COL8A1,DCBLD2	IMR90	Hi-C	24141950	LINC00973	16131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	98685741	98686133	98685825	Y	NA	LINC00973	DCBLD2	IMR90	Hi-C	24141950	LINC00973	11769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	98689970	98690253	98690112	Y	DCBLD2	LINC00973	DCBLD2	IMR90	Hi-C	24141950	LINC00973	7649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	99570772	99571127	99571120	Y	NA	NA	NA	NA	NA	NA	COL8A1	215453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	99575221	99575605	99575379	Y	NA	NA	NA	NA	NA	NA	COL8A1	219902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	99579150	99579217	99579184	Y	FILIP1L	NA	NA	NA	NA	NA	COL8A1	223831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99579229	99579736	99579484	Y	NA	NA	NA	NA	NA	NA	COL8A1	223910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr3	99581173	99581391	99581282	Y	NA	NA	NA	NA	NA	NA	COL8A1	225854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99582587	99582828	99582708	Y	FILIP1L	NA	NA	NA	NA	NA	COL8A1	227268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	99584293	99584813	99584482	Y	NA	NA	NA	NA	NA	NA	COL8A1	228974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99596957	99597300	99597045	Y	TBC1D23	NA	NA	NA	NA	NA	FILIP1L	234057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99749892	99750279	99749982	Y	NA	NA	NA	NA	NA	NA	FILIP1L	81078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99764609	99765000	99764644	Y	FILIP1L,C3orf26	NA	TMEM30C	IMR90	Hi-C	24141950	FILIP1L	66357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	99782957	99783256	99783070	Y	NA	FILIP1L	TMEM30C	IMR90	Hi-C	24141950	FILIP1L	48101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.39970329330122
chr3	99944403	99944723	99944568	Y	NA	TBC1D23	C3orf26,MIR548G,TMEM30C,FILIP1L	IMR90	Hi-C	24141950	TBC1D23	33121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr3	100028092	100028475	100028284	Y	TBC1D23	NIT2	NA	NA	NA	NA	NIT2	23070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	100054250	100054545	100054496	Y	NA	NIT2	NA	NA	NA	NA	NIT2	2705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	101146332	101146443	101146386	Y	NA	NA	NA	NA	NA	NA	SENP7	83642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr3	101403455	101403770	101403678	Y	SENP7,RG9MTD1,PCNP,NFKBIZ,ZBTB11,RPL24	ZBTB11,CEP97	NA	NA	NA	NA	RPL24	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.584927315866449
chr3	101444542	101444901	101444615	Y	FAM55C,FAM55C,CEP97	RPL24,CEP97	NA	NA	NA	NA	CEP97	3773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr3	103861090	103861239	103861165	Y	NA	NA	NA	NA	NA	NA	RNU1-43P	984286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	105087492	105087848	105087688	Y	NA	ALCAM	NA	NA	NA	NA	ALCAM	3739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.554026270103322
chr3	105087916	105088171	105088021	Y	ALCAM	ALCAM	NA	NA	NA	NA	ALCAM	4163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr3	105395533	105395739	105395657	Y	NA	NA	NA	NA	NA	NA	CBLB	190657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	105486064	105486421	105486242	Y	NA	NA	NA	NA	NA	NA	CBLB	99975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	105549302	105549342	105549320	Y	CBLB	CBLB	NA	NA	NA	NA	CBLB	37054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	107318808	107318949	107318879	Y	NA	NA	NA	NA	NA	NA	BBX	79025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	107376610	107376921	107376801	Y	NA	NA	NA	NA	NA	NA	BBX	136827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	107504411	107504731	107504449	Y	NA	NA	NA	NA	NA	NA	BBX	264628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	107711874	107712477	107712307	Y	CD47	NA	MYH15,CD47,LOC285205,IFT57,HHLA2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CD47	95395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	110587612	110587624	110587618	Y	NA	NA	NA	NA	NA	NA	PVRL3	199294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	110688601	110689002	110688903	Y	NA	NA	NA	NA	NA	NA	PVRL3	97916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	111289781	111290083	111289847	Y	CD96	NA	NA	NA	NA	NA	PLCXD2	101440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	111420857	111420932	111420895	Y	NA	PLCXD2,PHLDB2	PHLDB2,CD96,ABHD10	IMR90	Hi-C	24141950	PHLDB2	28412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	111480028	111480653	111480348	Y	NA	PHLDB2	NA	NA	NA	NA	PHLDB2	30684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	111481970	111482358	111482172	Y	PHLDB2	PHLDB2	NA	NA	NA	NA	PHLDB2	32626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	111484180	111484533	111484208	Y	NA	PHLDB2	NA	NA	NA	NA	PHLDB2	34836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	111623667	111623869	111623803	Y	NA	NA	NA	NA	NA	NA	ABHD10	71988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	112274528	112274888	112274746	Y	SLC35A5,ATG3	SLC35A5,ATG3	NA	NA	NA	NA	SLC35A5	3668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	113078924	113079182	113079053	Y	NA	NA	NA	NA	NA	NA	WDR52	79275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr3	113473473	113473635	113473557	Y	QTRTD1,KIAA2018,NAA50,ATP6V1A	NAA50,ATP6V1A,RP11-271C24.2	NA	NA	NA	NA	RP11-271C24.2	9218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	113638745	113638778	113638762	Y	NA	NA	NA	NA	NA	NA	RP11-435F17.1	71167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	114103176	114103363	114103329	Y	NA	NA	NA	NA	NA	NA	KIAA1407	329716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	114246828	114247170	114246841	Y	ZBTB20	NA	NA	NA	NA	NA	KIAA1407	473368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	114261968	114262342	114261973	Y	ZBTB20	NA	NA	NA	NA	NA	KIAA1407	488508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	114271834	114271933	114271884	Y	NA	NA	NA	NA	NA	NA	KIAA1407	498374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	114289290	114289509	114289367	Y	NA	NA	NA	NA	NA	NA	KIAA1407	515830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	114307902	114308314	114307958	Y	NA	NA	NA	NA	NA	NA	KIAA1407	534442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	114373701	114374062	114373901	Y	ZBTB20,ZBTB20,ZBTB20,ZBTB20	NA	NA	NA	NA	NA	ZBTB20	490056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	114813239	114813371	114813303	Y	NA	NA	NA	NA	NA	NA	ZBTB20	50747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	115337526	115337854	115337690	Y	NA	NA	NA	NA	NA	NA	ZBTB20	473408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	115502758	115503253	115502970	Y	NA	NA	NA	NA	NA	NA	ZBTB20	638640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr3	115503263	115503751	115503546	Y	NA	NA	NA	NA	NA	NA	ZBTB20	639145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	115503837	115504240	115504182	Y	NA	NA	NA	NA	NA	NA	ZBTB20	639719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr3	115511576	115511993	115511793	Y	NA	NA	NA	NA	NA	NA	ZBTB20	647458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	115545713	115545826	115545800	Y	NA	NA	NA	NA	NA	NA	ZBTB20	681595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	115556507	115556695	115556650	Y	NA	NA	NA	NA	NA	NA	ZBTB20	692389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	115595102	115595314	115595123	Y	GAP43	NA	NA	NA	NA	NA	ZBTB20	730984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	115790074	115790198	115790193	Y	NA	NA	NA	NA	NA	NA	ZBTB20	925956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	118561016	118561389	118561159	Y	NA	NA	NA	NA	NA	NA	B4GALT4	396561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	119144576	119144994	119144966	Y	ARHGAP31,COX17,ADPRH	TMEM39A,POGLUT1	NA	NA	NA	NA	TMEM39A	40683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	119147570	119147724	119147648	Y	NA	TMEM39A,POGLUT1	NA	NA	NA	NA	TMEM39A	37953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	119230547	119230943	119230634	Y	NA	TMEM39A,POGLUT1,TIMMDC1	NA	NA	NA	NA	TIMMDC1	15168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	119237356	119237846	119237595	Y	ARHGAP31,COX17,CD80,ADPRH,TMEM39A,POGLUT1	TIMMDC1	NA	NA	NA	NA	TIMMDC1	21977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	119238487	119238668	119238501	Y	NA	TIMMDC1	NA	NA	NA	NA	TIMMDC1	23108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr3	119514057	119514298	119514132	Y	NR1I2,NR1I2	NR1I2	NA	NA	NA	NA	NR1I2	16726	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.66060444340034
chr3	119809073	119809433	119809278	Y	NA	GSK3B,RP11-18H7.1	NA	NA	NA	NA	GSK3B	1831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	120277715	120278240	120277932	Y	NA	NDUFB4	FSTL1,GPR156,LRRC58,NR1I2,NDUFB4,GTF2E1	IMR90	Hi-C	24141950	NDUFB4	34916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	120355972	120356358	120356256	Y	NA	NDUFB4,HGD	NA	NA	NA	NA	NDUFB4	42816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.41613655692013
chr3	120361404	120361730	120361550	Y	NA	NDUFB4,HGD	NA	NA	NA	NA	HGD	37688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr3	120397142	120397339	120397236	Y	NA	HGD	NA	NA	NA	NA	HGD	2079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr3	120397505	120397688	120397597	Y	NA	HGD	NA	NA	NA	NA	HGD	1730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr3	120463141	120463503	120463258	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	3301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	120492875	120493095	120492951	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	33035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr3	120493479	120494008	120493729	Y	NA	GTF2E1,RABL3	NA	NA	NA	NA	RABL3	33639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr3	121257379	121257441	121257436	Y	NA	RPL7AP11,POLQ	NA	NA	NA	NA	POLQ	5412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr3	121520314	121520680	121520641	Y	NA	IQCB1,EAF2	NA	NA	NA	NA	IQCB1	31246	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	121539764	121539854	121539811	Y	NA	IQCB1,EAF2	NA	NA	NA	NA	IQCB1	12072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr3	121550824	121551193	121550988	Y	NA	IQCB1,EAF2	NA	NA	NA	NA	IQCB1	733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	121664489	121664635	121664539	Y	NA	NA	NA	NA	NA	NA	EAF2	112459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	122208819	122209075	122208974	Y	NA	KPNA1	NA	NA	NA	NA	KPNA1	22717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	122400701	122401439	122401076	Y	CSTA,KPNA1,PARP9,DTX3L,PARP9,PARP9,HSPBAP1,DIRC2,PARP14	EIF4BP8,PARP14	NA	NA	NA	NA	PARP14	3236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	122516218	122516436	122516387	Y	CSTA,KPNA1,PARP9,DTX3L,PARP9,PARP9,PARP14,HSPBAP1,DIRC2	HSPBAP1,DIRC2	NA	NA	NA	NA	DIRC2	4576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	122787344	122787648	122787385	Y	SEMA5B,PDIA5	PDIA5	NA	NA	NA	NA	PDIA5	3435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	123229622	123229815	123229688	Y	NA	NA	NA	NA	NA	NA	ADCY5	63017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	123241172	123241525	123241376	Y	NA	NA	NA	NA	NA	NA	PTPLB	60507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr3	123263878	123263964	123263921	Y	ADCY5,ADCY5	PTPLB,MYLK-AS1	NA	NA	NA	NA	PTPLB	38068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr3	123304962	123305362	123305193	Y	PTPLB	PTPLB,MYLK-AS1	NA	NA	NA	NA	MYLK-AS1	2573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr3	123324068	123324437	123324253	Y	PTPLB	PTPLB,MYLK-AS1	NA	NA	NA	NA	MYLK-AS1	21679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr3	123358215	123358608	123358268	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	55826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	123379811	123380137	123379976	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	77422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	123388051	123388291	123388171	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	85662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	123407272	123407514	123407399	Y	NA	NA	NA	NA	NA	NA	MYLK-AS1	104883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	123469666	123469916	123469803	Y	MYLK	NA	NA	NA	NA	NA	MYLK	131262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	123476863	123477567	123477241	Y	MYLK	NA	NA	NA	NA	NA	MYLK	123611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.517377033115692
chr3	123508502	123508917	123508819	Y	NA	NA	NA	NA	NA	NA	MYLK	92261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	123511748	123512001	123511875	Y	NA	NA	NA	NA	NA	NA	MYLK	89177	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	123526629	123526951	123526787	Y	NA	NA	NA	NA	NA	NA	MYLK	74227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	123662416	123662605	123662519	Y	NA	CCDC14	NA	NA	NA	NA	CCDC14	15959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	124419861	124420177	124419915	Y	KALRN	UMPS	NA	NA	NA	NA	UMPS	27036	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.79296618402356
chr3	124531464	124532111	124531823	Y	NA	NA	NA	NA	NA	NA	UMPS	84251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	124553626	124554125	124554004	Y	KALRN	NA	NA	NA	NA	NA	ITGB5	64140	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.45992989795355
chr3	124564415	124564677	124564502	Y	HEG1,ITGB5	NA	NA	NA	NA	NA	ITGB5	53588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	124605050	124605342	124605178	Y	ITGB5	ITGB5	NA	NA	NA	NA	ITGB5	12923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.618285469276543
chr3	124698484	124698857	124698671	Y	NA	MUC13	NA	NA	NA	NA	MUC13	27821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	124779995	124780351	124780112	Y	ITGB5,HEG1	HEG1	NA	NA	NA	NA	HEG1	7193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	124781797	124782117	124781832	Y	NA	HEG1	NA	NA	NA	NA	HEG1	8995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	124786089	124786383	124786283	Y	NA	HEG1	NA	NA	NA	NA	HEG1	13287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	124927154	124927458	124927339	Y	NA	NA	NA	NA	NA	NA	HEG1	154352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	125231315	125231583	125231558	Y	NA	SNX4	NA	NA	NA	NA	SNX4	5458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	125235229	125235600	125235483	Y	NA	SNX4	NA	NA	NA	NA	SNX4	1441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	125709142	125709481	125709414	Y	ZXDC,CCDC37	NA	NA	NA	NA	NA	FAM86JP	75679	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.87451095591483
chr3	125712652	125712829	125712741	Y	NA	NA	NA	NA	NA	NA	FAM86JP	79189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	125986265	125986571	125986320	Y	NA	NA	KLF15,ZXDC,ALDH1L1,CCDC37	IMR90	Hi-C	24141950	ALDH1L1	71428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	126074775	126075511	126074965	Y	ALDH1L1,UROC1,CCDC37,KLF15	KLF15	NA	NA	NA	NA	KLF15	490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr3	126108107	126108472	126108304	Y	NA	KLF15	KLF15,CCDC37,ALDH1L1	IMR90	Hi-C	24141950	KLF15	33822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	126187165	126187389	126187309	Y	ZXDC	ZXDC,UROC1	NA	NA	NA	NA	ZXDC	5373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	126249002	126249358	126249248	Y	ZXDC,UROC1,CHST13	UROC1,CHST13	NA	NA	NA	NA	CHST13	7876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	126359707	126359720	126359714	Y	NA	TXNRD3NB,TXNRD3	NA	NA	NA	NA	TXNRD3	12278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	126391611	126391660	126391640	Y	NA	TXNRD3,CHCHD6	NA	NA	NA	NA	TXNRD3	19613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr3	126423873	126424195	126424114	Y	NA	CHCHD6	NA	NA	NA	NA	CHCHD6	2810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	126630341	126630598	126630469	Y	ZXDC	NA	NA	NA	NA	NA	CHCHD6	209278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	126680194	126680270	126680232	Y	NA	NA	NA	NA	NA	NA	CHCHD6	259131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	126701397	126702091	126701497	Y	PLXNA1	NA	CHCHD6,PLXNA1	MCF7,K562	ChIA-PET	22265404	CHCHD6	280334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.749112210463175
chr3	126702933	126703224	126703109	Y	NA	NA	CHCHD6,PLXNA1	MCF7,K562	ChIA-PET	22265404	CHCHD6	281870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	127416375	127416550	127416435	Y	NA	ABTB1	NA	NA	NA	NA	ABTB1	26597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	127886942	127887322	127887108	Y	NA	EEFSEC,RUVBL1	NA	NA	NA	NA	RUVBL1	16185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.737604495076184
chr3	127962120	127962365	127962246	Y	NA	NA	NA	NA	NA	NA	RUVBL1	91363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	128135736	128135843	128135790	Y	GATA2,GATA2,GATA2,C3orf27,DNAJB8	NA	NA	NA	NA	NA	RP11-475N22.4	70212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	128216520	128216923	128216625	Y	EEFSEC,DNAJB8,GATA2,GATA2,GATA2	RP11-475N22.4,GATA2	GATA2,C3orf27,RUVBL1,EEFSEC,DNAJB8,DNAJB8-AS1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	GATA2	6492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	128304030	128304455	128304163	Y	EEFSEC,DNAJB8,GATA2,GATA2,GATA2	NA	GATA2,SEC61A1,RUVBL1,EEFSEC,DNAJB8-AS1,DNAJB8,LOC90246,C3orf27	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RPN1	93463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	128336521	128336831	128336572	Y	DNAJB8	NA	NA	NA	NA	NA	RPN1	61087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr3	128337505	128337705	128337543	Y	KIAA1257,GP9	NA	NA	NA	NA	NA	RPN1	60213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	128366732	128367045	128366901	Y	NA	RPN1	NA	NA	NA	NA	RPN1	30873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	128475272	128475670	128475352	Y	RAB7A,ISY1,CNBP	RAB7A,FTH1P4	NA	NA	NA	NA	FTH1P4	6191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	128745839	128746109	128746044	Y	NA	NA	NA	NA	NA	NA	RAB43	93535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr3	128837764	128838022	128837873	Y	MBD4,H1FX,C3orf37,C3orf37,KIAA1257,ISY1,CNBP,RAB43,RAB43,RAB43,RAB43	RAB43,ISY1-RAB43,ISY1	NA	NA	NA	NA	RAB43	1622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	128838520	128838686	128838629	Y	MBD4,C3orf37,C3orf37,RAB7A,KIAA1257,ISY1,CNBP,GP9,RAB43,RAB43,RAB43,RAB43	RAB43,ISY1-RAB43,ISY1	NA	NA	NA	NA	RAB43	958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	128947996	128948470	128948199	Y	MBD4,KIAA1257,RAB43,RAB43,RAB43,RAB43,ISY1,CNBP	CNBP	KIAA1257,CCDC48,ISY1-RAB43,CNBP,COPG1,GP9,C3orf37	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CNBP	47231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	128958880	128959235	128959095	Y	H1FOO	NA	KIAA1257,CCDC48,GP9,ISY1-RAB43,CNBP,COPG1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CNBP	58115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	128967680	128967946	128967799	Y	NA	NA	NA	NA	NA	NA	H1FX-AS1	64289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	129313710	129313984	129313815	Y	H1FOO	PLXND1	NA	NA	NA	NA	PLXND1	9677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.606126029972516
chr3	129315034	129315445	129315335	Y	COPG,PLXND1	PLXND1	NA	NA	NA	NA	PLXND1	8216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	129315678	129315871	129315798	Y	PLXND1	PLXND1	NA	NA	NA	NA	PLXND1	7790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310622768016884
chr3	129344975	129345039	129344984	Y	NA	PLXND1	NA	NA	NA	NA	PLXND1	21314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	129346331	129346490	129346427	Y	PLXND1	PLXND1	NA	NA	NA	NA	PLXND1	22670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.395097940558826
chr3	129436791	129437287	129437073	Y	NA	NA	NA	NA	NA	NA	PLXND1	113130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	129519745	129520139	129519943	Y	H1FOO	NA	NA	NA	NA	NA	TMCC1	90280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr3	129572979	129573244	129573238	Y	NA	TMCC1	NA	NA	NA	NA	TMCC1	37175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	129655699	129655849	129655774	Y	NA	TMCC1	TMCC1,TRH,IFT122,MBD4,LOC100507032	IMR90	Hi-C	24141950	TMCC1	45280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	130637982	130638444	130638066	Y	NA	NA	NA	NA	NA	NA	ATP2C1	70543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	131056791	131057139	131056963	Y	NA	NUDT16P1,NUDT16	NA	NA	NA	NA	NUDT16P1	21603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	131197540	131197572	131197556	Y	NA	MRPL3	NA	NA	NA	NA	MRPL3	22255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	132167229	132167399	132167330	Y	DNAJC13	DNAJC13	NA	NA	NA	NA	DNAJC13	32859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	132261870	132262263	132261985	Y	DNAJC13	NA	NA	NA	NA	NA	UBA5	109027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	132979220	132979385	132979303	Y	NA	NA	NA	NA	NA	NA	CDV3	311189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	133188180	133188542	133188363	Y	NA	NA	NA	NA	NA	NA	CDV3	102032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	133295128	133295300	133295215	Y	NA	CDV3	NA	NA	NA	NA	CDV3	4554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	133461507	133461687	133461597	Y	NA	TF,SRPRB	NA	NA	NA	NA	TF	1113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr3	133537876	133537890	133537883	Y	NA	SRPRB	NA	NA	NA	NA	SRPRB	36999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	134045700	134046050	134045958	Y	NA	RP11-200A1.1,RPL39P5,AMOTL2	NA	NA	NA	NA	RP11-200A1.1	15282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	134082893	134083489	134083439	Y	AMOTL2	RPL39P5,AMOTL2	NA	NA	NA	NA	AMOTL2	8832	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	135828343	135828732	135828538	Y	PPP2R3A	NA	NA	NA	NA	NA	MSL2	85351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	135897983	135898047	135898015	Y	NA	MSL2	NA	NA	NA	NA	MSL2	16036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	136153802	136154197	136154172	Y	NA	NA	NA	NA	NA	NA	PCCB	186654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	136327517	136327655	136327647	Y	NA	NA	NA	NA	NA	NA	STAG1	141565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr3	136427457	136427837	136427826	Y	STAG1	STAG1	NA	NA	NA	NA	STAG1	41383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	136533824	136534225	136534025	Y	NA	RP11-85F14.5,NCK1	NA	NA	NA	NA	RP11-85F14.5	44671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	136571906	136572239	136572061	Y	TMEM22	RP11-85F14.5,NCK1	NA	NA	NA	NA	RP11-85F14.5	6657	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	136631651	136631818	136631718	Y	NA	NA	NA	NA	NA	NA	NCK1	52601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	138364761	138365360	138365102	Y	PIK3CB,ARMC8	FAIM	NA	NA	NA	NA	FAIM	39313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr3	138438822	138439037	138438988	Y	PRR23C	NA	NA	NA	NA	NA	PIK3CB	112743	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	138442687	138442826	138442751	Y	NA	NA	NA	NA	NA	NA	PIK3CB	108954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	138552268	138552612	138552378	Y	MRAS	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	138565329	138565569	138565472	Y	NA	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	13549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	138581550	138581663	138581597	Y	NA	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	29770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	138581757	138582253	138582041	Y	NA	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	29977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.391646759236527
chr3	138582294	138582582	138582441	Y	MRPS22	PIK3CB	PIK3CB	IMR90	Hi-C	24141950	PIK3CB	30514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.466922559231666
chr3	138594717	138594956	138594896	Y	NA	PIK3CB	NA	NA	NA	NA	PIK3CB	42937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	138634319	138634690	138634472	Y	NA	NA	ESYT3,PIK3CB,MRPS22,MRAS,CEP70,FAIM	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIK3CB	82539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr3	139064285	139064552	139064299	Y	NA	COPB2,RP11-319G6.1	NA	NA	NA	NA	COPB2	42022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr3	139344390	139344678	139344552	Y	NA	NA	NA	NA	NA	NA	NMNAT3	50181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	140186013	140186197	140186105	Y	NA	NA	NA	NA	NA	NA	SLC25A36	472475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	141021600	141021902	141021781	Y	NA	ZBTB38	NA	NA	NA	NA	ZBTB38	19153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	141050524	141051086	141050761	Y	NA	ZBTB38	NA	NA	NA	NA	ZBTB38	9469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	141118771	141119120	141118811	Y	NA	NA	NA	NA	NA	NA	ZBTB38	77716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	141130337	141130617	141130393	Y	RASA2	NA	NA	NA	NA	NA	RASA2	73272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	141131172	141131505	141131226	Y	SLC25A36,RASA2	NA	NA	NA	NA	NA	RASA2	72384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr3	141131755	141132151	141131882	Y	NA	NA	NA	NA	NA	NA	RASA2	71738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.331329855950678
chr3	141204930	141205324	141205031	Y	NA	RASA2	NA	NA	NA	NA	RASA2	1041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	141230074	141230471	141230125	Y	NA	RASA2	NA	NA	NA	NA	RASA2	26185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	141319185	141319480	141319327	Y	RASA2	NA	NA	NA	NA	NA	RASA2	115296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr3	141458120	141458481	141458300	Y	RASA2	RNF7	NA	NA	NA	NA	RNF7	3074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	141482175	141482451	141482314	Y	NA	RNF7	NA	NA	NA	NA	RNF7	27129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	141611491	141611772	141611584	Y	NA	ATP1B3	NA	NA	NA	NA	ATP1B3	18525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	141707258	141707451	141707397	Y	NA	NA	NA	NA	NA	NA	RP11-343B5.1	53589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	142723898	142724007	142723903	Y	NA	PAQR9,U2SURP	NA	NA	NA	NA	U2SURP	42559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr3	142804014	142804376	142804307	Y	NA	CHST2	CHST2	K562	ChIA-PET	22265404	CHST2	31797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	144785670	144785716	144785693	Y	NA	NA	NA	NA	NA	NA	RPL21P39	754810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	145785304	145785639	145785521	Y	NA	RP11-274H2.3	NA	NA	NA	NA	RP11-274H2.3	332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	145959602	145959992	145959865	Y	PLSCR4	PLSCR4	NA	NA	NA	NA	PLSCR4	6974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	146114612	146114675	146114644	Y	NA	NA	NA	NA	NA	NA	PLSCR1	145976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	146257874	146258309	146258204	Y	NA	PLSCR1	NA	NA	NA	NA	PLSCR1	2342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	146259909	146260381	146260206	Y	PLSCR1	PLSCR1	NA	NA	NA	NA	PLSCR1	270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	148318861	148319089	148318964	Y	NA	NA	NA	NA	NA	NA	GYG1	388039	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.25136973751762
chr3	148320086	148320294	148320209	Y	NA	NA	NA	NA	NA	NA	GYG1	386834	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.74507961594229
chr3	148704982	148705163	148705084	Y	NA	GYG1	HLTF,GYG1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GYG1	1965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr3	148781933	148782210	148782183	Y	NA	HLTF	NA	NA	NA	NA	HLTF	20131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	148899476	148899525	148899501	Y	AGTR1,AGTR1,TM4SF4,CP	CP	NA	NA	NA	NA	CP	38317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	148942843	148943311	148943144	Y	NA	CP	NA	NA	NA	NA	CP	5001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.729719391694239
chr3	148963630	148964002	148963862	Y	NA	CP,RP11-206M11.7	GYG1,HPS3,CP,TM4SF18,HLTF	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CP	25788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	149104739	149105065	149104981	Y	COMMD2,TM4SF1	TM4SF1	GYG1,TM4SF18,TM4SF1,TM4SF4,WWTR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TM4SF1	11087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.871059774592531
chr3	149108520	149108892	149108690	Y	COMMD2,TM4SF1	TM4SF1	WWTR1,HLTF,HPS3,TM4SF18,TM4SF1,TM4SF4,WWTR1-AS1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TM4SF1	14868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	149119420	149119639	149119543	Y	NA	TM4SF1	WWTR1,ANKUB1	IMR90	Hi-C	24141950	TM4SF1	25768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr3	149151278	149151442	149151363	Y	NA	TM4SF4	GYG1,TM4SF18,TM4SF1,WWTR1,WWTR1-AS1	IMR90	Hi-C	24141950	TM4SF4	38319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	149194266	149194620	149194394	Y	CP,TM4SF4	TM4SF4,RP11-278L15.6	NA	NA	NA	NA	TM4SF4	4505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	149284462	149284628	149284613	Y	NA	NA	NA	NA	NA	NA	RP11-278L15.6	74015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	149330317	149330600	149330464	Y	WWTR1,WWTR1,WWTR1	NA	NA	NA	NA	NA	RP11-278L15.6	119870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	149333585	149333911	149333859	Y	TM4SF18,TM4SF18,TM4SF1,WWTR1,WWTR1	NA	NA	NA	NA	NA	WWTR1	118590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	149339543	149339560	149339552	Y	NA	NA	NA	NA	NA	NA	WWTR1	112941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	149356424	149356747	149356622	Y	NA	NA	NA	NA	NA	NA	WWTR1	95754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	149361418	149361700	149361559	Y	WWTR1	NA	NA	NA	NA	NA	WWTR1	90801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	149657313	149657850	149657694	Y	TSC22D2,RNF13	ANKUB1	NA	NA	NA	NA	ANKUB1	26322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr3	149668313	149668642	149668480	Y	NA	ANKUB1	NA	NA	NA	NA	ANKUB1	15530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	150089534	150090066	150089791	Y	NA	TSC22D2	TSC22D2,LOC646903,RNF13,PFN2	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	TSC22D2	34056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	150329194	150329427	150329421	Y	NA	SELT,SERP1	NA	NA	NA	NA	SERP1	10179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	150417166	150417289	150417212	Y	NA	RP11-103G8.2,FAM194A	NA	NA	NA	NA	RP11-103G8.2	2062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	150453151	150453509	150453478	Y	CLRN1	RP11-103G8.2,FAM194A,SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	24215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr3	150455785	150455994	150455895	Y	TSC22D2,SERP1,SIAH2	RP11-103G8.2,FAM194A,SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	21730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	150456267	150456381	150456351	Y	NA	RP11-103G8.2,FAM194A,SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	21343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264111101627431
chr3	150457276	150457594	150457395	Y	TSC22D2,SERP1,SIAH2	RP11-103G8.2,FAM194A,SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	20130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	150478267	150478712	150478564	Y	TSC22D2,SERP1,SELT,GPR171,SIAH2	SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2-AS1	543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	150482569	150482635	150482602	Y	NA	SIAH2-AS1,SIAH2	NA	NA	NA	NA	SIAH2	3305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	150987276	150987626	150987385	Y	P2RY12,MED12L	NA	NA	NA	NA	NA	MED12L	185792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	151915334	151915455	151915407	Y	NA	MBNL1	MBNL1	IMR90	Hi-C	24141950	MBNL1	44162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	151993494	151994006	151993570	Y	NA	MBNL1,MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	8150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	151996540	151996946	151996646	Y	NA	MBNL1,MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	11196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	152026905	152027295	152026911	Y	NA	MBNL1-AS1	NA	NA	NA	NA	MBNL1-AS1	41561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	152100220	152100544	152100298	Y	MBNL1	NA	NA	NA	NA	NA	MBNL1-AS1	114876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	152121454	152121974	152121660	Y	MBNL1	NA	NA	NA	NA	NA	MBNL1-AS1	136110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	152878171	152878732	152878352	Y	P2RY1,RAP2B	RAP2B	NA	NA	NA	NA	RAP2B	142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr3	155281187	155281565	155281523	Y	NA	NA	NA	NA	NA	NA	PLCH1	179291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	155382767	155382896	155382833	Y	NA	NA	NA	NA	NA	NA	PLCH1	77960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	155705974	155706059	155706016	Y	NA	NA	NA	NA	NA	NA	GMPS	119649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	156252887	156253352	156253202	Y	NA	SSR3	NA	NA	NA	NA	SSR3	17621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	156268270	156268550	156268410	Y	NA	SSR3	NA	NA	NA	NA	SSR3	2423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	156432757	156433079	156432845	Y	CCNL1,TIPARP,TIPARP,TIPARP	TIPARP,TIPARP-AS1	NA	NA	NA	NA	TIPARP-AS1	42590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	156442773	156442811	156442792	Y	TIPARP,TIPARP,TIPARP	NA	NA	NA	NA	NA	TIPARP-AS1	52606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	156527707	156527883	156527795	Y	NA	PA2G4P4,LEKR1	NA	NA	NA	NA	PA2G4P4	1186	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.131478465103668
chr3	156558833	156558838	156558836	Y	NA	PA2G4P4,LEKR1	NA	NA	NA	NA	LEKR1	17563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	156837520	156837824	156837670	Y	NA	CCNL1	NA	NA	NA	NA	CCNL1	38725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	156839965	156840160	156840071	Y	TIPARP,TIPARP,TIPARP,LEKR1,LEKR1,CCNL1	CCNL1	NA	NA	NA	NA	CCNL1	36389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	156847368	156847750	156847738	Y	NA	CCNL1,RP11-550I24.2	NA	NA	NA	NA	CCNL1	28799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.229267248369731
chr3	156852547	156853124	156852850	Y	NA	CCNL1,RP11-550I24.2	NA	NA	NA	NA	CCNL1	23425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	157935893	157935900	157935896	Y	NA	NA	NA	NA	NA	NA	RSRC1	114249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	158048767	158049059	158048913	Y	NA	NA	NA	NA	NA	NA	RSRC1	227123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	158054879	158054980	158054930	Y	NA	NA	NA	NA	NA	NA	MLF1	231972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	158447066	158447110	158447086	Y	NA	MFSD1	NA	NA	NA	NA	MFSD1	877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	158887731	158887850	158887799	Y	NA	NA	NA	NA	NA	NA	MFSD1	439744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	159538960	159539273	159539207	Y	NA	NA	NA	NA	NA	NA	IL12A	165264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	159647586	159647883	159647684	Y	NA	NA	IQCJ-SCHIP1,IL12A,IFT80,SMC4	IMR90	Hi-C	24141950	IL12A	56654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	160014353	160014630	160014494	Y	NA	NA	NA	NA	NA	NA	SMC4	100432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	160949185	160949470	160949344	Y	OTOL1	NA	NA	NA	NA	NA	NMD3	128701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	167468188	167468573	167468282	Y	NA	PDCD10,SERPINI1	NA	NA	NA	NA	SERPINI1	17157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	167751925	167752226	167752094	Y	NA	NA	NA	NA	NA	NA	GOLIM4	59537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	169379831	169380308	169379976	Y	NA	MECOM	NA	NA	NA	NA	MECOM	425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	169482089	169482431	169482154	Y	NA	TERC,MYNN	NA	NA	NA	NA	TERC	1241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr3	169494029	169494036	169494033	Y	NA	TERC,MYNN	NA	NA	NA	NA	MYNN	5410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	169502698	169502873	169502785	Y	GPR160,MYNN,LRRC34	TERC,MYNN	NA	NA	NA	NA	MYNN	14079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	169872442	169872609	169872497	Y	NA	PHC3	NA	NA	NA	NA	PHC3	24928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	169941070	169941418	169941334	Y	MYNN,MYNN,LRRIQ4,PHC3	PHC3,PRKCI	NA	NA	NA	NA	PRKCI	2917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	170073991	170074311	170074218	Y	SKIL,SKIL	SKIL	NA	NA	NA	NA	SKIL	525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr3	170584649	170585013	170584680	Y	NA	RPL22L1,EIF5A2	NA	NA	NA	NA	RPL22L1	1259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chr3	170712510	170712744	170712722	Y	SLC2A2	SLC2A2	NA	NA	NA	NA	SLC2A2	29795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121455937957082
chr3	170731292	170731567	170731430	Y	SLC2A2	SLC2A2	NA	NA	NA	NA	SLC2A2	10972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	170743200	170743517	170743359	Y	NA	SLC2A2	NA	NA	NA	NA	SLC2A2	661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr3	171282661	171283015	171282831	Y	PLD1,FNDC3B	NA	SLC2A2,TNIK,EIF5A2,SLC7A14	IMR90	Hi-C	24141950	TNIK	106464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	171494715	171495344	171494835	Y	FNDC3B,PLD1	PP13439,PLD1	NA	NA	NA	NA	PP13439	30370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	171495458	171495728	171495684	Y	FNDC3B,PLD1	PP13439,PLD1	NA	NA	NA	NA	PP13439	29986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	171519572	171519961	171519854	Y	NA	PP13439,PLD1	NA	NA	NA	NA	PP13439	5753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	171529898	171530084	171530030	Y	FNDC3B,PLD1	PP13439,PLD1	NA	NA	NA	NA	PLD1	3158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	171542633	171542898	171542814	Y	FNDC3B,PLD1	PP13439,PLD1	FNDC3B,PLD1,TMEM212	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PLD1	15893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	171543191	171543627	171543455	Y	FNDC3B,PLD1	PP13439,PLD1	FNDC3B,PLD1,TMEM212	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PLD1	16451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	171597232	171597577	171597404	Y	NA	NA	NA	NA	NA	NA	PLD1	70492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.413999644762688
chr3	171678764	171678932	171678818	Y	NA	NA	PLD1,FNDC3B,TMEM212,TNIK	IMR90	Hi-C	24141950	FNDC3B	76486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	171684878	171685278	171685188	Y	PLD1,FNDC3B	NA	PLD1,FNDC3B,TMEM212	IMR90	Hi-C	24141950	FNDC3B	70140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.420079364414702
chr3	171789788	171790157	171789907	Y	PLD1,FNDC3B	FNDC3B	NA	NA	NA	NA	FNDC3B	34370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	171792323	171792831	171792493	Y	PLD1,FNDC3B	FNDC3B	NA	NA	NA	NA	FNDC3B	36905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr3	171816708	171816982	171816800	Y	NA	NA	NA	NA	NA	NA	FNDC3B	61290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr3	171820468	171820770	171820540	Y	NA	NA	NA	NA	NA	NA	FNDC3B	65050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	171847438	171848726	171847798	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	92020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.220558990388003
chr3	171855430	171855856	171855550	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	100012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	171856568	171857271	171856877	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	101150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	171858231	171859026	171858504	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	102813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr3	171863188	171863575	171863224	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	107770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	171878014	171878468	171878150	Y	PLD1,FNDC3B,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	122596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	171927297	171927567	171927433	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	171879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	171935922	171936083	171936003	Y	FNDC3B	NA	NA	NA	NA	NA	FNDC3B	180504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	171948409	171948713	171948561	Y	PLD1,FNDC3B	NA	NA	NA	NA	NA	FNDC3B	192991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	171954526	171954782	171954635	Y	FNDC3B,FNDC3B	NA	NA	NA	NA	NA	BZW1P1	188097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	172035782	172036031	172035880	Y	FNDC3B	NA	NA	NA	NA	NA	BZW1P1	106848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	172038895	172038985	172038971	Y	FNDC3B	NA	NA	NA	NA	NA	BZW1P1	103894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	172086059	172086253	172086084	Y	NA	NA	NA	NA	NA	NA	BZW1P1	56626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	172467147	172467552	172467259	Y	NA	NCEH1,ECT2,RNU4-4P	NCEH1,ECT2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ECT2	675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	172510084	172510259	172510171	Y	NA	ECT2,RNU4-4P	NA	NA	NA	NA	RNU4-4P	2089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr3	175695899	175696046	175695968	Y	NA	NA	NLGN1	IMR90	Hi-C	24141950	UBE2V1P2	261441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	176774167	176774584	176774367	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	138677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	176776147	176776153	176776150	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	137108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	176862590	176862993	176862904	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	50268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	176912879	176913389	176913098	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	176916249	176916425	176916364	Y	NA	TBL1XR1	NA	NA	NA	NA	TBL1XR1	2988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	176988907	176989274	176989091	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	75646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	177018025	177018414	177018104	Y	NA	NA	NA	NA	NA	NA	TBL1XR1	104764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr3	177075253	177075542	177075439	Y	NA	NA	TBL1XR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	161992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr3	177076157	177076922	177076435	Y	TBL1XR1	NA	TBL1XR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	162896	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.62888024303744
chr3	177077500	177078084	177077832	Y	NA	NA	TBL1XR1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	164239	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr3	177168818	177169119	177168967	Y	NA	NA	TBL1XR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBL1XR1	255557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	177234134	177234201	177234168	Y	NA	NA	TBL1XR1	IMR90	Hi-C	24141950	RP11-91K9.1	298452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr3	177307615	177308089	177307887	Y	NA	NA	TBL1XR1	IMR90	Hi-C	24141950	RP11-91K9.1	224564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	177309103	177309580	177309365	Y	NA	NA	TBL1XR1	IMR90	Hi-C	24141950	RP11-91K9.1	223073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	177542015	177542147	177542058	Y	NA	RP11-91K9.1	TBL1XR1	IMR90	Hi-C	24141950	RP11-91K9.1	9362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr3	177979552	177979945	177979765	Y	NA	NA	NA	NA	NA	NA	RP11-91K9.1	446899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	178671519	178671916	178671775	Y	NA	NA	KCNMB2	IMR90	Hi-C	24141950	ZMAT3	116151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	178786594	178786786	178786690	Y	NA	ZMAT3	NA	NA	NA	NA	ZMAT3	1281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	178787910	178788066	178787991	Y	ZMAT3	ZMAT3	NA	NA	NA	NA	ZMAT3	1	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	178978348	178978737	178978528	Y	PIK3CA,MFN1,GNB4	LRRFIP1P1	NA	NA	NA	NA	LRRFIP1P1	1287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.348917802596883
chr3	179309053	179309431	179309273	Y	NA	ACTL6A,MRPL47,NDUFB5	NA	NA	NA	NA	MRPL47	11011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	182613640	182613943	182613809	Y	MCCC1	NA	NA	NA	NA	NA	DCUN1D1	87798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	182645862	182646115	182645990	Y	MCF2L2,MCCC1	NA	NA	NA	NA	NA	DCUN1D1	55626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	183089068	183089238	183089169	Y	B3GNT5,KLHL6	NA	NA	NA	NA	NA	MCF2L2	55328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	184301316	184301494	184301488	Y	NA	EPHB3	NA	NA	NA	NA	EPHB3	23744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	184560038	184560430	184560098	Y	VPS8	VPS8	NA	NA	NA	NA	VPS8	32107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	184727770	184727947	184727859	Y	NA	NA	NA	NA	NA	NA	C3orf70	140855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	184775166	184775451	184775309	Y	VPS8	NA	NA	NA	NA	NA	C3orf70	93351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	185215412	185215562	185215482	Y	NA	TMEM41A	NA	NA	NA	NA	TMEM41A	567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.372584957287902
chr3	185339016	185339200	185339107	Y	NA	SENP2,RP11-537I16.2	NA	NA	NA	NA	RP11-537I16.2	16653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	185374091	185374577	185374335	Y	NA	NA	NA	NA	NA	NA	RP11-537I16.2	51728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	185482318	185482647	185482554	Y	NA	NA	NA	NA	NA	NA	IGF2BP2	58197	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	185533882	185534105	185533994	Y	NA	IGF2BP2	SENP2	IMR90	Hi-C	24141950	IGF2BP2	6739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	185821581	185821963	185821920	Y	NA	ETV5	NA	NA	NA	NA	ETV5	4144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	185825302	185825582	185825395	Y	NA	ETV5	NA	NA	NA	NA	ETV5	525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.172733054833692
chr3	185905496	185905742	185905693	Y	NA	NA	NA	NA	NA	NA	ETV5	79389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr3	185948324	185948597	185948503	Y	DGKG	NA	NA	NA	NA	NA	ETV5	122217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	185956078	185956394	185956322	Y	NA	NA	NA	NA	NA	NA	DGKG	121632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	186001404	186001736	186001631	Y	DGKG	NA	NA	NA	NA	NA	DGKG	76290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	186239156	186239478	186239433	Y	NA	DNAJB11,TBCCD1	NA	NA	NA	NA	DNAJB11	43714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	186784569	186784773	186784671	Y	NA	NA	NA	NA	NA	NA	ST6GAL1	138295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr3	186892076	186892095	186892086	Y	NA	NA	LOC100131635	IMR90	Hi-C	24141950	MASP1	115715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr3	187004502	187004623	187004526	Y	MASP1	MASP1	NA	NA	NA	NA	MASP1	3187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr3	187458720	187459019	187458856	Y	LPP,BCL6,BCL6,BCL6	RP11-211G3.2,BCL6	NA	NA	NA	NA	RP11-211G3.2	455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr3	187459288	187459644	187459469	Y	RTP4,BCL6,BCL6,BCL6	BCL6	NA	NA	NA	NA	RP11-211G3.2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr3	187467867	187468249	187468141	Y	BCL6	RP11-211G3.2,BCL6	NA	NA	NA	NA	BCL6	6352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.625027734176379
chr3	187529493	187529917	187529708	Y	RTP4,BCL6	NA	LPP,BCL6,LPP-AS2	IMR90	Hi-C	24141950	BCL6	67978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	187566904	187567160	187566982	Y	RTP4,BCL6,BCL6,BCL6	NA	LPP,BCL6	IMR90	Hi-C	24141950	BCL6	105389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	187607399	187607588	187607479	Y	BCL6	NA	BCL6,LPP	IMR90	Hi-C	24141950	BCL6	145884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.381624232089941
chr3	187754201	187754558	187754362	Y	NA	NA	BCL6,LPP	IMR90	Hi-C	24141950	LPP	114514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.805646403999215
chr3	187841029	187841328	187841153	Y	BCL6,BCL6	LPP,LPP-AS2	BCL6,LPP	IMR90	Hi-C	24141950	LPP	27744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.567339880827444
chr3	187891343	187891657	187891500	Y	NA	LPP,LPP-AS2	NA	NA	NA	NA	LPP-AS2	21498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	187901313	187901616	187901372	Y	NA	LPP,LPP-AS2	NA	NA	NA	NA	LPP-AS2	31468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	187904912	187905263	187905013	Y	BCL6,BCL6	LPP,LPP-AS2	NA	NA	NA	NA	LPP-AS2	35067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	187980692	187981197	187980748	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	110847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	187983465	187984215	187983993	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	113620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr3	187988232	187988684	187988401	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	118387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	188012691	188013249	188012784	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	142846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.67465956506782
chr3	188014586	188014976	188014809	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	144741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	188065570	188065751	188065619	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	195725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	188103161	188103345	188103235	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	233316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	188223633	188224028	188223838	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	353788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	188291512	188291633	188291575	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	421667	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	188475500	188475699	188475599	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	605655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr3	188506419	188506821	188506595	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	636574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	188618525	188618672	188618589	Y	NA	NA	NA	NA	NA	NA	LPP-AS2	748680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	188668723	188669229	188668886	Y	NA	NA	LPP,BCL6,LPP-AS2,LOC100131635	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LPP-AS2	798878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	190062904	190063381	190063085	Y	LEPREL1,CLDN1,CLDN16	CLDN1	LEPREL1,CLDN1,CLDN16	IMR90	Hi-C	24141950	CLDN1	24640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.425176343329369
chr3	190252374	190252607	190252502	Y	CLDN1,IL1RAP	IL1RAP	NA	NA	NA	NA	IL1RAP	22534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	190284228	190284576	190284349	Y	NA	NA	NA	NA	NA	NA	IL1RAP	54388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	191049369	191049653	191049414	Y	NA	CCDC50	NA	NA	NA	NA	CCDC50	4503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	192289148	192289495	192289213	Y	NA	NA	NA	NA	NA	NA	MB21D2	344455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	192604773	192605048	192605023	Y	NA	MB21D2	NA	NA	NA	NA	MB21D2	28902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr3	192634153	192634990	192634777	Y	MB21D2	MB21D2	NA	NA	NA	NA	MB21D2	203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	192873675	192873788	192873739	Y	NA	NA	NA	NA	NA	NA	HRASLS	83126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.512280054201025
chr3	193851636	193853009	193852912	Y	ATP13A3,HES1	NA	NA	NA	NA	NA	HES1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chr3	193857372	193857551	193857481	Y	HES1	HES1	NA	NA	NA	NA	HES1	5438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	193858651	193858843	193858731	Y	NA	HES1	NA	NA	NA	NA	HES1	6717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr3	193859199	193859624	193859359	Y	TMEM44	HES1	NA	NA	NA	NA	HES1	7265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.397566381143778
chr3	193876735	193877026	193876899	Y	NA	HES1	NA	NA	NA	NA	HES1	24801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	193983162	193983541	193983368	Y	TMEM44	RP11-513G11.3	LOC647323,OPA1	IMR90	Hi-C	24141950	RP11-513G11.3	19725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	193989061	193989396	193989144	Y	NA	RP11-513G11.3	HES1,LOC647323,LOC100131551	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-513G11.3	25624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	194048965	194049014	194048990	Y	NA	CPN2	NA	NA	NA	NA	CPN2	21043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	194153543	194153935	194153911	Y	ATP13A3	NA	NA	NA	NA	NA	ATP13A3	63158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	194247870	194248550	194248205	Y	HES1,ATP13A3	ATP13A3	ATP13A3,GP5,TMEM44,FLJ34208	IMR90	Hi-C	24141950	ATP13A3	30777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	194261428	194261556	194261501	Y	HES1,ATP13A3	ATP13A3,TMEM44-AS1	ATP13A3,FLJ34208,TMEM44	IMR90	Hi-C	24141950	TMEM44-AS1	41184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	194341751	194341921	194341813	Y	NA	TMEM44-AS1,AC046143.3,TMEM44,LSG1	NA	NA	NA	NA	AC046143.3	9731	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.69905906411791
chr3	194435877	194435987	194435931	Y	LSG1	LSG1,FAM43A	NA	NA	NA	NA	FAM43A	31255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	194461690	194461887	194461800	Y	FAM43A	NA	NA	NA	NA	NA	FAM43A	57068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	194754255	194754281	194754268	Y	NA	NA	XXYLT1,LOC100507391,LSG1,FAM43A,PPP1R2	IMR90	Hi-C	24141950	XXYLT1	235615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	194826238	194826399	194826316	Y	FAM43A	NA	NA	NA	NA	NA	XXYLT1	163497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	194875742	194876159	194875826	Y	FAM43A,C3orf21	NA	NA	NA	NA	NA	XXYLT1	113737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr3	194881062	194881476	194881270	Y	FAM43A,C3orf21	NA	NA	NA	NA	NA	XXYLT1	108420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr3	194882926	194883249	194883145	Y	FAM43A	NA	NA	NA	NA	NA	XXYLT1	106647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr3	194898663	194899282	194898930	Y	NA	NA	NA	NA	NA	NA	XXYLT1	90614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	194931453	194931642	194931532	Y	NA	NA	NA	NA	NA	NA	XXYLT1	58254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	194979031	194979323	194979161	Y	NA	XXYLT1	NA	NA	NA	NA	XXYLT1	10573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	195264699	195265107	195264994	Y	ACAP2,TNK2,PPP1R2	PPP1R2,APOD	NA	NA	NA	NA	PPP1R2	3102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	195573980	195574341	195574135	Y	MUC20,MUC4	NA	NA	NA	NA	NA	TFRC	232719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	195627582	195627903	195627662	Y	ACAP2,PPP1R2,PCYT1A,TNK2,TNK2	NA	NA	NA	NA	NA	TFRC	179157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr3	195632869	195633225	195632990	Y	ACAP2,PPP1R2,PCYT1A,TNK2	NA	NA	NA	NA	NA	TFRC	173835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr3	195849521	195850263	195850145	Y	TFRC,TFRC	TFRC	LOC401109,PCYT1A,TFRC,MIR570,MUC20,UBXN7	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TFRC	42461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	195919575	195919687	195919655	Y	NA	NA	NA	NA	NA	NA	PCYT1A	93141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	195946520	195946837	195946671	Y	LRRC33,PCYT1A	NA	NA	NA	NA	NA	PCYT1A	65991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	196001542	196001805	196001683	Y	UBXN7,RNF168,LRRC33,PCYT1A	PCYT1A,TCTEX1D2	NA	NA	NA	NA	PCYT1A	11023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	196047617	196047878	196047747	Y	NA	PCYT1A,TCTEX1D2,TM4SF19	NA	NA	NA	NA	TCTEX1D2	4447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	196437709	196437842	196437776	Y	NA	CEP19,PAK2	NA	NA	NA	NA	CEP19	545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	196635737	196635948	196635847	Y	UBXN7,RNF168,CEP19,PIGX,PAK2,SENP5	SENP5,NCBP2	NA	NA	NA	NA	NCBP2	31520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr3	196694427	196694825	196694642	Y	NA	NCBP2,PIGZ,AC011322.1,MFI2-AS1	NA	NA	NA	NA	PIGZ	496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr3	196696811	196697020	196696957	Y	LRRC33,PIGZ	NCBP2,PIGZ,AC011322.1,MFI2-AS1	NA	NA	NA	NA	PIGZ	2880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.97739722970276
chr3	196758283	196758681	196758467	Y	NA	AC011322.1,MFI2-AS1,MFI2	NA	NA	NA	NA	MFI2	3596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	196784656	196784743	196784700	Y	CEP19,PIGX,PAK2	MFI2	NA	NA	NA	NA	MFI2	29969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	196855650	196855726	196855688	Y	NA	NA	NA	NA	NA	NA	MFI2	100963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	196948967	196949228	196949097	Y	NA	NA	MFI2	IMR90	Hi-C	24141950	DLG1	74943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr3	197033346	197033465	197033406	Y	DLG1	DLG1	NA	NA	NA	NA	DLG1	9175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	197153931	197154131	197153988	Y	MFI2,MFI2	AC128709.2	BDH1,DLG1,LOC100507086	IMR90	Hi-C	24141950	AC128709.2	29145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr3	197216995	197217339	197217145	Y	DLG1	AC128709.2	NA	NA	NA	NA	AC128709.2	33719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr3	197247664	197248059	197247722	Y	NA	NA	NA	NA	NA	NA	AC128709.2	64388	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.73308078599022
chr3	197301708	197302062	197301885	Y	NA	NA	NA	NA	NA	NA	AC024560.3	50715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	330052	330352	330160	Y	NA	NA	NA	NA	NA	NA	ABCA11P	135566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	683740	684022	683889	Y	GAK,MYL5,MFSD7,PCGF3	RP11-1191J2.2,MYL5,ATP5I,PCGF3	NA	NA	NA	NA	PCGF3	13515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	693278	693552	693364	Y	GAK,MFSD7,PCGF3	RP11-1191J2.2,MYL5,ATP5I,PCGF3	NA	NA	NA	NA	PCGF3	3985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	991255	991645	991565	Y	ZNF721,PDE6B,CPLX1,TMEM175	DGKQ,IDUA,SLC26A1,FGFRL1	NA	NA	NA	NA	SLC26A1	6027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	1027686	1027967	1027729	Y	FGFRL1,FGFRL1,FGFRL1	DGKQ,IDUA,SLC26A1,FGFRL1	NA	NA	NA	NA	FGFRL1	25962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	1037465	1037841	1037534	Y	MAEA,KIAA1530,MFSD7,PCGF3,GAK,IDUA	FGFRL1	NA	NA	NA	NA	FGFRL1	35741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr4	1237849	1238004	1237927	Y	NA	SPON2,CTBP1,MAEA	NA	NA	NA	NA	CTBP1	3737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	1339085	1339471	1339276	Y	NA	NA	NA	NA	NA	NA	MAEA	57446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr4	1339592	1340250	1339850	Y	NA	NA	NA	NA	NA	NA	MAEA	57953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	1710531	1710811	1710671	Y	NA	SLBP,TMEM129,TACC3	NA	NA	NA	NA	SLBP	1471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	1712467	1712893	1712787	Y	WHSC1	SLBP,TMEM129,TACC3	NA	NA	NA	NA	SLBP	185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	1753782	1754101	1753962	Y	FGFR3	SLBP,TMEM129,TACC3,FGFR3	NA	NA	NA	NA	TACC3	32555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr4	1769544	1769746	1769644	Y	FGFR3	TMEM129,TACC3,FGFR3	FGFR3	MCF7	ChIA-PET	22265404	FGFR3	23288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.442432249940863
chr4	1796551	1796852	1796752	Y	NA	FGFR3	NA	NA	NA	NA	FGFR3	3517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	1865990	1866293	1866178	Y	NA	LETM1,WHSC1	LETM1,WHSC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	WHSC1	4858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.297309157292762
chr4	1966776	1967112	1967086	Y	WHSC1,WHSC1	SCARNA22	NA	NA	NA	NA	SCARNA22	7251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	2063376	2063744	2063670	Y	FGFR3,NAT8L	C4orf48,NAT8L	NA	NA	NA	NA	NAT8L	4137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	2537711	2538436	2538089	Y	NA	NA	NA	NA	NA	NA	RNF4	75764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.295994888127905
chr4	2538945	2539718	2539367	Y	NA	NA	NA	NA	NA	NA	RNF4	76998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr4	2762487	2762593	2762537	Y	SH3BP2	TNIP2,SH3BP2	TNIP2,NOP14-AS1,NOP14,MFSD10	K562,MCF7	ChIA-PET	22265404	TNIP2	6384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	2764467	2764789	2764630	Y	LOC402160	TNIP2,SH3BP2	TNIP2,NOP14-AS1,NOP14,MFSD10	K562,MCF7	ChIA-PET	22265404	TNIP2	8364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.440295337783422
chr4	2801486	2801785	2801636	Y	SH3BP2	TNIP2,SH3BP2,ADD1	NA	NA	NA	NA	SH3BP2	8736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	2802562	2803388	2803116	Y	ZFYVE28,LOC402160,HTT,TNIP2,TNIP2,SH3BP2,SH3BP2,SH3BP2	TNIP2,SH3BP2,ADD1	NA	NA	NA	NA	SH3BP2	9812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	3085381	3085754	3085447	Y	NA	HTT	NA	NA	NA	NA	HTT	10973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	3293872	3294174	3294028	Y	NA	RGS12	RGS12	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RGS12	1117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr4	3357519	3357800	3357660	Y	NA	NA	NA	NA	NA	NA	RGS12	64764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	3438789	3438989	3438900	Y	NA	HGFAC	NA	NA	NA	NA	HGFAC	2625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr4	3784192	3784335	3784264	Y	OTOP1,RGS12	ADRA2C	NA	NA	NA	NA	ADRA2C	18117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.327056031635795
chr4	3829290	3829379	3829335	Y	LYAR,LYAR,ADRA2C	NA	LOC100133461	IMR90	Hi-C	24141950	ADRA2C	63215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.796607129197176
chr4	3829713	3829948	3829819	Y	ADRA2C	NA	LOC100133461	IMR90	Hi-C	24141950	ADRA2C	63638	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.33206271191695
chr4	3836768	3837443	3837153	Y	NA	NA	LOC100133461	IMR90	Hi-C	24141950	ADRA2C	70693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr4	4272259	4272533	4272507	Y	ZBTB49	TMEM128,LYAR,ZBTB49	NA	NA	NA	NA	LYAR	17363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	4475518	4475743	4475631	Y	NA	NA	NA	NA	NA	NA	STX18-AS1	66115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr4	4542716	4543043	4542880	Y	ZBTB49,STX18	STX18-AS1,STX18	NA	NA	NA	NA	STX18	643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr4	4692859	4693117	4692937	Y	NA	NA	NA	NA	NA	NA	STX18	150786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	4855584	4855774	4855697	Y	NA	MSX1	MSX1	K562	ChIA-PET	22265404	MSX1	3619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	6278017	6278414	6278100	Y	PPP2R2C,CRMP1,JAKMIP1	WFS1	NA	NA	NA	NA	WFS1	8441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr4	6311062	6311148	6311105	Y	NA	WFS1	NA	NA	NA	NA	WFS1	41486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr4	6565985	6566385	6566254	Y	JAKMIP1,TBC1D14,PPP2R2C,PPP2R2C	MAN2B2	NA	NA	NA	NA	MAN2B2	8517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	6592942	6593078	6593012	Y	NA	MAN2B2,MRFAP1	NA	NA	NA	NA	MAN2B2	18040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	6635412	6635534	6635472	Y	NA	MRFAP1,AC093323.3,RP11-539L10.3	NA	NA	NA	NA	MRFAP1	4284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.507514603713869
chr4	6734442	6734743	6734533	Y	KIAA0232	S100P,MRFAP1L1,KIAA0232	NA	NA	NA	NA	MRFAP1L1	24835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.583773144446355
chr4	6754865	6755056	6754928	Y	NA	MRFAP1L1,KIAA0232	LOC100129931,TADA2B,KIAA0232,TBC1D14	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KIAA0232	26046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.613520018789387
chr4	6785099	6785509	6785391	Y	TBC1D14,TBC1D14,TADA2B,KIAA0232	KIAA0232	NA	NA	NA	NA	KIAA0232	3997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.278247355344137
chr4	6841864	6842265	6841993	Y	NA	NA	NA	NA	NA	NA	KIAA0232	60762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	6891169	6891522	6891340	Y	TBC1D14,TBC1D14	TBC1D14	NA	NA	NA	NA	TBC1D14	17447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	6893983	6894399	6894044	Y	KIAA0232,TADA2B,TBC1D14,TBC1D14	TBC1D14	NA	NA	NA	NA	TBC1D14	14570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	6895356	6895637	6895499	Y	KIAA0232	TBC1D14	NA	NA	NA	NA	TBC1D14	13332	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.46970202872186
chr4	6909761	6910075	6909918	Y	NA	TBC1D14	NA	NA	NA	NA	TBC1D14	792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	6919401	6919899	6919549	Y	MAN2B2,KIAA0232,TADA2B,TBC1D14,TBC1D14	TBC1D14	NA	NA	NA	NA	TBC1D14	10432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	6959680	6959690	6959685	Y	NA	NA	NA	NA	NA	NA	TBC1D14	50711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	7637304	7637463	7637384	Y	NA	NA	NA	NA	NA	NA	PSAPL1	202604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	7648496	7648718	7648592	Y	NA	NA	NA	NA	NA	NA	PSAPL1	213796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr4	7649791	7650390	7650086	Y	NA	NA	NA	NA	NA	NA	PSAPL1	215091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310622768016884
chr4	7674956	7675119	7675023	Y	NA	NA	NA	NA	NA	NA	PSAPL1	240256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	7807485	7807548	7807490	Y	NA	NA	NA	NA	NA	NA	AFAP1	132105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.331661384378189
chr4	7833117	7833393	7833178	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1	106260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	7834057	7834311	7834184	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1	105342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	7846072	7846237	7846145	Y	AFAP1	NA	NA	NA	NA	NA	AFAP1	93416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	7877911	7878253	7878055	Y	NA	NA	NA	NA	NA	NA	AFAP1	61400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	7972368	7972631	7972565	Y	NA	AFAP1	NA	NA	NA	NA	AFAP1	32715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	7974971	7975417	7975298	Y	AFAP1	AFAP1	NA	NA	NA	NA	AFAP1	35318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	8205331	8205464	8205374	Y	SH3TC1	ABLIM2,SH3TC1	NA	NA	NA	NA	SH3TC1	23532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	9154755	9155069	9154900	Y	NA	FAM86KP	NA	NA	NA	NA	FAM86KP	1733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.450157767185245
chr4	9693091	9693174	9693121	Y	NA	NA	NA	NA	NA	NA	RP11-448G15.1	312932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	10001685	10001951	10001818	Y	NA	RP11-448G15.1	NA	NA	NA	NA	RP11-448G15.1	4155	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr4	10034211	10034588	10034478	Y	SLC2A9	RP11-448G15.1,SLC2A9	NA	NA	NA	NA	SLC2A9	19972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	10182011	10182277	10182105	Y	WDR1	NA	WDR1,CLNK,ZNF518B	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	WDR1	65438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	11473418	11473587	11473515	Y	NA	NA	CLNK	IMR90	Hi-C	24141950	RNPS1P1	101819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	11490984	11491223	11491155	Y	NA	NA	CLNK	IMR90	Hi-C	24141950	RNPS1P1	119385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	11696419	11696433	11696426	Y	NA	NA	CLNK,HS3ST1	IMR90	Hi-C	24141950	RNPS1P1	324820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	12642016	12642195	12642111	Y	NA	RP11-352E6.2	NA	NA	NA	NA	RP11-352E6.2	1755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr4	13219623	13219635	13219629	Y	NA	NA	NA	NA	NA	NA	HSP90AB2P	113403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	13257922	13258131	13258027	Y	NA	NA	NA	NA	NA	NA	HSP90AB2P	74907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	13484540	13485001	13484899	Y	NA	RAB28	NA	NA	NA	NA	RAB28	551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr4	14833004	14833350	14833280	Y	NA	NA	NA	NA	NA	NA	CPEB2	168948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	15485746	15486124	15486037	Y	CC2D2A	CC2D2A	NA	NA	NA	NA	CC2D2A	16257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	15594702	15595080	15594956	Y	FBXL5	NA	NA	NA	NA	NA	FAM200B	86205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	15684115	15684561	15684231	Y	FBXL5,FAM200B,BST1	FAM200B,FBXL5,RP11-115L11.1	NA	NA	NA	NA	FBXL5	2813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr4	16226860	16227020	16226938	Y	FGFBP2,TAPT1	TAPT1,RPS21P4	NA	NA	NA	NA	TAPT1	13	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	17545817	17546174	17545996	Y	NA	QDPR,LAP3	NA	NA	NA	NA	LAP3	30641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	17581888	17582305	17582055	Y	LAP3,MED28	LAP3,MED28	NA	NA	NA	NA	LAP3	5073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	17829390	17829398	17829394	Y	CLRN2,NCAPG	DCAF16,NCAPG	NA	NA	NA	NA	NCAPG	18865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr4	17979858	17980211	17980206	Y	CLRN2,LCORL	LCORL	NA	NA	NA	NA	LCORL	41288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	20627000	20627372	20627197	Y	NA	NA	NA	NA	NA	NA	PACRGL	68533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	21602576	21603408	21603328	Y	KCNIP4,KCNIP4,KCNIP4	NA	NA	NA	NA	NA	KCNIP4	345014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	22270180	22270523	22270471	Y	NA	NA	LOC100505912	IMR90	Hi-C	24141950	GPR125	245154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	22363170	22363219	22363195	Y	NA	NA	NA	NA	NA	NA	GPR125	152458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	23879721	23879980	23879976	Y	NA	PPARGC1A	NA	NA	NA	NA	PPARGC1A	23732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	23890124	23890507	23890316	Y	PPARGC1A	PPARGC1A	NA	NA	NA	NA	PPARGC1A	13205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr4	23890635	23890864	23890849	Y	NA	PPARGC1A	NA	NA	NA	NA	PPARGC1A	12848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.622890822018937
chr4	23947088	23947695	23947571	Y	NA	PPARGC1A	NA	NA	NA	NA	PPARGC1A	43376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	24346800	24347040	24346920	Y	NA	NA	NA	NA	NA	NA	DHX15	237133	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	24660007	24660225	24660117	Y	NA	ATP5LP3	CCDC149,MIR573	IMR90	Hi-C	24141950	ATP5LP3	2009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr4	25097730	25097880	25097805	Y	NA	NA	NA	NA	NA	NA	SEPSECS	62324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	25175369	25175577	25175408	Y	NA	SEPSECS,PI4K2B	NA	NA	NA	NA	PI4K2B	15106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr4	25536997	25537326	25537166	Y	NA	NA	NA	NA	NA	NA	RP11-302F12.1	141146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	37956443	37956472	37956456	Y	NA	PTTG2	NA	NA	NA	NA	PTTG2	3584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	38080175	38080435	38080304	Y	NA	NA	NA	NA	NA	NA	PTTG2	120119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr4	38080568	38081008	38080843	Y	NA	NA	NA	NA	NA	NA	PTTG2	120512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	38162192	38162313	38162253	Y	NA	NA	NA	NA	NA	NA	PTTG2	202136	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr4	38162520	38162833	38162765	Y	NA	NA	NA	NA	NA	NA	PTTG2	202464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	38320550	38320897	38320770	Y	NA	NA	FLJ13197,KLF3,TBC1D1,TLR10	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	KLF3	342920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	38530760	38531092	38530874	Y	TLR6,TLR1,KLF3	NA	FLJ13197,KLF3	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF3	132725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	38607589	38607693	38607690	Y	NA	NA	NA	NA	NA	NA	KLF3	56124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.335112565700488
chr4	38664467	38664838	38664653	Y	TLR6,TLR1,KLHL5,KLF3	KLF3	NA	NA	NA	NA	RP11-617D20.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.174538950170823
chr4	38665008	38665204	38665059	Y	TLR6,TLR1,KLHL5,KLF3	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	504	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221873259552861
chr4	38668617	38669179	38668850	Y	KLF3	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	4113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146437361812958
chr4	38673994	38674276	38674074	Y	NA	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	9490	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.336426834865345
chr4	38674773	38675062	38674906	Y	KLF3	KLF3,RP11-617D20.1	NA	NA	NA	NA	RP11-617D20.1	10269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr4	38735219	38735515	38735398	Y	NA	NA	KLF3,TBC1D1,FLJ13197	IMR90	Hi-C	24141950	RP11-617D20.1	70715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	38820282	38820708	38820366	Y	NA	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	TLR1,TLR6	35730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	38859134	38859762	38859410	Y	KLF3,KLHL5,TLR1,TLR6	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	TLR1,TLR6	2696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	38870386	38870769	38870503	Y	FAM114A1	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	FAM114A1	3088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr4	38871281	38871430	38871296	Y	NA	TLR1,TLR6,FAM114A1	NA	NA	NA	NA	FAM114A1	3983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr4	39038547	39038755	39038651	Y	NA	TMEM156,KLHL5	NA	NA	NA	NA	KLHL5	5904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	39045588	39045914	39045752	Y	NA	TMEM156,KLHL5	NA	NA	NA	NA	KLHL5	929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	39152863	39152994	39152905	Y	NA	WDR19	TLR10,FAM114A1,KLB	IMR90	Hi-C	24141950	WDR19	29030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	39285630	39285978	39285919	Y	RFC1	NA	NA	NA	NA	NA	RFC1	80017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	39316114	39316675	39316347	Y	NA	RFC1	NA	NA	NA	NA	RFC1	49320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	39548258	39548506	39548382	Y	KLHL5	UGDH-AS1,UGDH	NA	NA	NA	NA	UGDH	20327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	39813102	39813401	39813252	Y	NA	NA	NA	NA	NA	NA	UBE2K	115438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	39894546	39894889	39894718	Y	NA	NA	NA	NA	NA	NA	PDS5A	82687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	39908966	39909133	39909103	Y	NA	NA	NA	NA	NA	NA	PDS5A	68443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr4	39913580	39913628	39913604	Y	NA	NA	NA	NA	NA	NA	PDS5A	63948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	39933245	39933555	39933419	Y	NA	PDS5A	NA	NA	NA	NA	PDS5A	44021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	39935708	39936100	39935904	Y	NA	PDS5A	NA	NA	NA	NA	PDS5A	41476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	40050527	40050740	40050634	Y	NA	N4BP2	NA	NA	NA	NA	N4BP2	5706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	40056293	40056591	40056356	Y	NA	NA	NA	NA	NA	NA	N4BP2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	40165955	40166245	40166174	Y	NA	NA	NA	NA	NA	NA	N4BP2	109509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	40578690	40579499	40579160	Y	RBM47	NA	NA	NA	NA	NA	NSUN7	170415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr4	40674578	40674731	40674666	Y	RBM47	NA	RBM47	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NSUN7	75183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr4	40684955	40685070	40685013	Y	NA	NA	RBM47,NSUN7	IMR90	Hi-C	24141950	NSUN7	64844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	40733927	40734212	40733987	Y	RBM47	NSUN7	NSUN7,RBM47,N4BP2,CHRNA9	IMR90	Hi-C	24141950	NSUN7	15702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	40911488	40911803	40911603	Y	NA	NA	NA	NA	NA	NA	NSUN7	161574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	40943410	40943552	40943502	Y	NA	NA	NA	NA	NA	NA	NSUN7	193496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	40997224	40997582	40997567	Y	NA	NA	NA	NA	NA	NA	APBB2	219149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	41100025	41100220	41100123	Y	NA	NA	NA	NA	NA	NA	APBB2	116511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	41469951	41470276	41469966	Y	NA	NA	NA	NA	NA	NA	UCHL1	213521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	41936193	41936441	41936268	Y	TMEM33	TMEM33	NA	NA	NA	NA	TMEM33	1056	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.74990569895641
chr4	41999139	41999467	41999284	Y	NA	SLC30A9	NA	NA	NA	NA	SLC30A9	8650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	42073690	42073968	42073740	Y	NA	NA	NA	NA	NA	NA	SLC30A9	83201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	42333546	42333678	42333612	Y	NA	NA	ATP8A1	IMR90	Hi-C	24141950	ATP8A1	323444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	44712631	44712762	44712670	Y	NA	GUF1,GNPDA2	NA	NA	NA	NA	GNPDA2	13850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	44727575	44727855	44727678	Y	KCTD8,GNPDA2	GUF1,GNPDA2	NA	NA	NA	NA	GNPDA2	963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	47473680	47473878	47473784	Y	NA	COMMD8,ATP10D	NA	NA	NA	NA	COMMD8	9944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	48339625	48339996	48339981	Y	NA	SLAIN2	TEC,SLAIN2	K562,MCF7	ChIA-PET	22265404	SLAIN2	1343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	48840387	48840419	48840403	Y	NA	OCIAD1	NA	NA	NA	NA	OCIAD1	35158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	48851417	48851730	48851443	Y	ZAR1,FRYL	OCIAD1	NA	NA	NA	NA	OCIAD1	46188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	52725801	52726193	52725998	Y	NA	DCUN1D4	NA	NA	NA	NA	DCUN1D4	18635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	53725752	53726074	53725904	Y	NA	NA	NA	NA	NA	NA	ERVMER34-1	109945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	53862934	53863152	53863043	Y	NA	NA	NA	NA	NA	NA	ERVMER34-1	247127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	53890542	53890886	53890882	Y	NA	NA	NA	NA	NA	NA	ERVMER34-1	274735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	53985720	53986039	53985931	Y	NA	NA	NA	NA	NA	NA	SCFD2	244203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	54032997	54033196	54033097	Y	NA	NA	NA	NA	NA	NA	SCFD2	197046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	54055240	54055561	54055400	Y	NA	NA	NA	NA	NA	NA	SCFD2	174681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	54172916	54173263	54173102	Y	SCFD2	NA	NA	NA	NA	NA	SCFD2	56979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	54794044	54794386	54794192	Y	NA	NA	SCFD2,PDGFRA,CHIC2,FIP1L1,LNX1,RPL21P44,GSX2	IMR90	Hi-C	24141950	CHIC2	134471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr4	54871626	54871896	54871863	Y	NA	NA	NA	NA	NA	NA	CHIC2	56961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	54951124	54951140	54951133	Y	NA	CHIC2	SCFD2,CHIC2,FIP1L1,PDGFRA	IMR90	Hi-C	24141950	CHIC2	22267	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	54958023	54958135	54958077	Y	NA	CHIC2	SCFD2,CHIC2	IMR90	Hi-C	24141950	CHIC2	29166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.853803867981035
chr4	56419632	56419978	56419838	Y	NA	CLOCK	NA	NA	NA	NA	CLOCK	8327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	56453376	56453745	56453528	Y	NA	CLOCK	NA	NA	NA	NA	CLOCK	42071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	57132335	57132393	57132366	Y	NA	NA	NA	NA	NA	NA	RPL7AP31	87908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	57278248	57278433	57278373	Y	NA	AASDH,PPAT,PAICS	NA	NA	NA	NA	PPAT	21348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	57459098	57459424	57459263	Y	NA	NA	NA	NA	NA	NA	HOPX	86641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr4	65473910	65474488	65474148	Y	NA	NA	NA	NA	NA	NA	RP11-204H9.2	179283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	65475793	65476032	65475913	Y	NA	NA	NA	NA	NA	NA	RP11-204H9.2	181166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	66404380	66404519	66404495	Y	NA	NA	NA	NA	NA	NA	RP11-396M11.1	553325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	66899965	66900079	66900021	Y	NA	NA	NA	NA	NA	NA	RP11-396M11.1	57765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr4	66960590	66960760	66960693	Y	NA	RP11-396M11.1	NA	NA	NA	NA	RP11-396M11.1	2746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr4	68794370	68794573	68794449	Y	NA	NA	NA	NA	NA	NA	UBA6-AS1	229372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	69598714	69599110	69598795	Y	UGT2B10,UGT2B7,UGT2A3	NA	NA	NA	NA	NA	UGT2B10	80601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.659871587434078
chr4	69602663	69602782	69602708	Y	UGT2B15,UGT2B11,UGT2B7,UGT2A3,UGT2B10	NA	NA	NA	NA	NA	UGT2B10	76929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.578185050966614
chr4	69813796	69814179	69814033	Y	UGT2B15,UGT2B10,UGT2B7,UGT2A3	UGT2A3	NA	NA	NA	NA	UGT2A3	1330	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.26582669833105
chr4	70696313	70696626	70696438	Y	NA	SULT1B1,SULT1E1	NA	NA	NA	NA	SULT1E1	27244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.292543706805606
chr4	70698476	70698796	70698636	Y	UGT2A2	SULT1B1,SULT1E1	NA	NA	NA	NA	SULT1E1	25074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.23650113944184
chr4	71237940	71238062	71237994	Y	CABS1	NA	NA	NA	NA	NA	ODAM	177727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	71695000	71695080	71695041	Y	NA	GRSF1	NA	NA	NA	NA	GRSF1	8582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	72637368	72637579	72637457	Y	GC,GC	GC	NA	NA	NA	NA	GC	30179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	74055104	74055142	74055123	Y	ANKRD17,ALB,AFM	NA	NA	NA	NA	NA	ANKRD17	67373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	74464812	74465326	74464976	Y	RASSF6,RASSF6	RASSF6	NA	NA	NA	NA	RASSF6	19022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.275778914759185
chr4	75550011	75550323	75550221	Y	NA	NA	EREG,MTHFD2L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	EREG	321151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.329524472220747
chr4	75554137	75554451	75554233	Y	NA	NA	EREG,MTHFD2L	IMR90	Hi-C	24141950	EREG	325277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	75585032	75585282	75585171	Y	NA	NA	EREG,MTHFD2L	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	EREG	356172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr4	76750745	76750859	76750802	Y	NA	NA	NA	NA	NA	NA	USO1	102968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	76980027	76980257	76980159	Y	NA	NA	NA	NA	NA	NA	SDAD1	69912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	77129675	77129810	77129753	Y	NAAA	SCARB2,FAM47E	NA	NA	NA	NA	SCARB2	3236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	77133814	77134170	77133987	Y	NAAA,CXCL10,CXCL11	SCARB2,FAM47E	NA	NA	NA	NA	FAM47E	621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	77752154	77752315	77752229	Y	NA	NA	SHROOM3,SEPT11,SOWAHB	IMR90	Hi-C	24141950	SOWAHB	64687	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18381945476686
chr4	77868010	77868840	77868612	Y	NA	SEPT11	NA	NA	NA	NA	SEPT11	16	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr4	77869090	77869312	77869177	Y	NA	SEPT11	NA	NA	NA	NA	SEPT11	234	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	77869398	77869850	77869619	Y	SEPT11	SEPT11	NA	NA	NA	NA	SEPT11	542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	78656019	78656351	78656260	Y	NA	NA	NA	NA	NA	NA	CNOT6L	82418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	78711096	78711128	78711114	Y	NA	CNOT6L	NA	NA	NA	NA	CNOT6L	27641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr4	78823537	78823752	78823560	Y	NA	MRPL1	NA	NA	NA	NA	MRPL1	41863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	78842671	78842943	78842808	Y	NA	NA	NA	NA	NA	NA	MRPL1	60997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	78977065	78977655	78977359	Y	NA	RP11-777B9.5,FRAS1	NA	NA	NA	NA	FRAS1	341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	78977894	78978171	78977912	Y	FRAS1	FRAS1	NA	NA	NA	NA	FRAS1	1170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.827176646532792
chr4	78979777	78980204	78980085	Y	NA	FRAS1	NA	NA	NA	NA	FRAS1	3053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr4	79083838	79083918	79083865	Y	NA	NA	NA	NA	NA	NA	FRAS1	107114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.262796832462573
chr4	79253143	79253310	79253148	Y	NA	NA	NA	NA	NA	NA	ANXA3	217363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	79264564	79264673	79264619	Y	NA	NA	NA	NA	NA	NA	ANXA3	206000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	79264997	79265051	79265025	Y	NA	NA	NA	NA	NA	NA	ANXA3	205622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	79473983	79474151	79474067	Y	ANXA3	ANXA3	NA	NA	NA	NA	ANXA3	3310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	80131303	80131759	80131432	Y	NA	NA	NA	NA	NA	NA	PAQR3	272711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	80979830	80980309	80980136	Y	ANTXR2	NA	NA	NA	NA	NA	ANTXR2	64299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	80991308	80991698	80991476	Y	PRDM8,ANTXR2	NA	NA	NA	NA	NA	ANTXR2	52910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	81048415	81048773	81048660	Y	ANTXR2,PRDM8	ANTXR2	PAQR3,ANTXR2,PRDM8,FGF5	IMR90	Hi-C	24141950	ANTXR2	3807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	82553061	82553360	82553250	Y	RASGEF1B	NA	NA	NA	NA	NA	RASGEF1B	410037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	83755588	83755973	83755970	Y	NA	SCD5	NA	NA	NA	NA	SCD5	37578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr4	83912303	83912539	83912423	Y	NA	LIN54,COPS4	NA	NA	NA	NA	LIN54	19540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	84034119	84034423	84034342	Y	THAP9,LIN54,HPSE,HPSE,HPSE,HELQ,COQ2,PLAC8,PLAC8	PLAC8	NA	NA	NA	NA	PLAC8	21805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr4	84074574	84075011	84074839	Y	THAP9,HPSE,HPSE,HPSE,COQ2,AGPAT9,PLAC8	PLAC8	NA	NA	NA	NA	PLAC8	18346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	84196492	84196601	84196547	Y	NA	COQ2	NA	NA	NA	NA	COQ2	7466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	84359899	84360122	84360011	Y	NA	HELQ,MRPS18C	NA	NA	NA	NA	HELQ	14887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	84398625	84398990	84398638	Y	NA	HELQ,MRPS18C,FAM175A	NA	NA	NA	NA	MRPS18C	23540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	84478147	84478291	84478208	Y	PLAC8,COQ2,HPSE,HPSE,HPSE,HELQ,AGPAT9	FAM175A,AGPAT9	NA	NA	NA	NA	AGPAT9	23080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	84772757	84772864	84772811	Y	NA	NA	NA	NA	NA	NA	AGPAT9	317690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	84776291	84776536	84776414	Y	NA	NA	NA	NA	NA	NA	AGPAT9	321224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	85868944	85869302	85869263	Y	NA	WDFY3-AS2,WDFY3	NA	NA	NA	NA	WDFY3-AS2	16236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	87835479	87835856	87835675	Y	NA	AFF1,C4orf36,TECRP1	NA	NA	NA	NA	AFF1	18298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	87838829	87839174	87839055	Y	NA	AFF1,C4orf36,TECRP1	NA	NA	NA	NA	AFF1	14980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	87881950	87882282	87882116	Y	NA	AFF1,C4orf36,TECRP1	NA	NA	NA	NA	TECRP1	12674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	87894121	87894618	87894307	Y	NA	AFF1,C4orf36,TECRP1	NA	NA	NA	NA	TECRP1	24845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	88128179	88128500	88128218	Y	NA	KLHL8	NA	NA	NA	NA	KLHL8	30966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	88128695	88128755	88128733	Y	NA	KLHL8	NA	NA	NA	NA	KLHL8	30711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr4	88408034	88408084	88408060	Y	SPARCL1	NA	NA	NA	NA	NA	NUDT9	66300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	88787227	88787597	88787501	Y	NA	NA	NA	NA	NA	NA	SPP1	107222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr4	89185531	89185830	89185781	Y	NA	ABCG2,PPM1K	NA	NA	NA	NA	PPM1K	18091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	89302401	89302730	89302543	Y	HERC6,HERC5	HERC6	NA	NA	NA	NA	HERC6	4510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	89747458	89747948	89747469	Y	NA	NA	NA	NA	NA	NA	NAP1L5	130072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	90212945	90213002	90212979	Y	GPRIN3	NA	NA	NA	NA	NA	FAM13A	182396	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	91453996	91454262	91454133	Y	NA	NA	NA	NA	NA	NA	RP11-115D19.1	983489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	93104192	93104578	93104286	Y	NA	NA	NA	NA	NA	NA	SMARCAD1	2022184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	93226746	93226922	93226838	Y	GRID2	NA	NA	NA	NA	NA	SMARCAD1	1899840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	95373822	95374139	95373960	Y	PDLIM5	PDLIM5	NA	NA	NA	NA	PDLIM5	2785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.557477451425621
chr4	95374521	95374795	95374668	Y	NA	PDLIM5	NA	NA	NA	NA	PDLIM5	3484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	95406092	95406259	95406175	Y	NA	PDLIM5	NA	NA	NA	NA	PDLIM5	35055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	95437375	95437547	95437461	Y	PDLIM5	NA	NA	NA	NA	NA	PDLIM5	66338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	95469761	95469962	95469859	Y	HPGDS,PDLIM5	NA	NA	NA	NA	NA	PDLIM5	98724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	99443713	99444102	99443889	Y	NA	NA	NA	NA	NA	NA	TSPAN5	133678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	99827146	99827610	99827384	Y	NA	AC019131.1,EIF4E	NA	NA	NA	NA	AC019131.1	21528	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	99845137	99845196	99845164	Y	NA	AC019131.1,EIF4E	NA	NA	NA	NA	AC019131.1	3942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	99848541	99848872	99848707	Y	NA	AC019131.1,EIF4E	NA	NA	NA	NA	AC019131.1	266	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	101329645	101329884	101329805	Y	EMCN	NA	NA	NA	NA	NA	H2AFZ	460100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	102113415	102113532	102113437	Y	NA	NA	NA	NA	NA	NA	AP001816.1	153405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	102254048	102254281	102254164	Y	NA	AP001816.1,PPP3CA	NA	NA	NA	NA	AP001816.1	12656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	102254740	102255090	102255043	Y	NA	AP001816.1,PPP3CA	NA	NA	NA	NA	AP001816.1	11847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	102266716	102267419	102267189	Y	NA	PPP3CA	NA	NA	NA	NA	AP001816.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr4	103360821	103361254	103361183	Y	SLC39A8,SLC39A8,SLC39A8,SLC39A8,UBE2D3,UBE2D3,UBE2D3,UBE2D3,NFKB1,MANBA	SLC39A8	NFKB1,SLC9B1,UBE2D3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC39A8	10406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	103483964	103484649	103484311	Y	NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA,NFKB1	NA	NA	NA	NA	NA	NFKB1	63478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	103541931	103542312	103542286	Y	NA	NA	NA	NA	NA	NA	NFKB1	121445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr4	103608721	103609347	103609253	Y	NHEDC1,SLC39A8,SLC39A8,SLC39A8,SLC39A8,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA	NA	NA	NA	NA	NA	MANBA	70804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	103673229	103673433	103673315	Y	NHEDC1,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,MANBA	MANBA	NA	NA	NA	NA	MANBA	6718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	103678847	103679008	103678977	Y	NA	MANBA	NA	NA	NA	NA	MANBA	1143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	103750426	103750532	103750434	Y	NHEDC1,NFKB1,UBE2D3,UBE2D3,UBE2D3,UBE2D3,UBE2D3	RP11-10L12.4,UBE2D3,CISD2	NA	NA	NA	NA	RP11-10L12.4	3214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	103781884	103782294	103782163	Y	MANBA	RP11-10L12.4,UBE2D3,CISD2	NA	NA	NA	NA	UBE2D3	5759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	103788773	103788886	103788830	Y	NA	RP11-10L12.4,UBE2D3,CISD2	NA	NA	NA	NA	CISD2	638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	103937289	103937350	103937320	Y	NA	SLC9B1	NA	NA	NA	NA	SLC9B1	1546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	103967476	103967511	103967493	Y	NA	SLC9B1,SLC9B2	NA	NA	NA	NA	SLC9B1	28580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	104228091	104228235	104228147	Y	NA	NA	NA	NA	NA	NA	CENPE	110525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.410548463440389
chr4	104302340	104302484	104302413	Y	NA	NA	NA	NA	NA	NA	CENPE	184774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	106305912	106306089	106306001	Y	NA	NA	NA	NA	NA	NA	PPA2	87149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	106383790	106383988	106383871	Y	TET2,TET2	PPA2,EEF1A1P9	NA	NA	NA	NA	PPA2	9250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	106390941	106391445	106391094	Y	TET2,TET2	PPA2,EEF1A1P9	NA	NA	NA	NA	PPA2	1793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	106628155	106628490	106628322	Y	NA	GSTCD	NA	NA	NA	NA	GSTCD	220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	108430904	108430932	108430918	Y	SGMS2	NA	NA	NA	NA	NA	PAPSS1	208676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	108544740	108545114	108544927	Y	SGMS2	NA	NA	NA	NA	NA	PAPSS1	94494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	108561367	108561423	108561395	Y	NA	NA	NA	NA	NA	NA	PAPSS1	78185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	109513186	109513523	109513472	Y	NA	RPL34-AS1,RPL34	NA	NA	NA	NA	RPL34-AS1	26093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	110361567	110361723	110361645	Y	NA	SEC24B,SEC24B-AS1	NA	NA	NA	NA	SEC24B-AS1	8594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	110464231	110464470	110464351	Y	NA	CCDC109B	NA	NA	NA	NA	CCDC109B	14891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	110623287	110623426	110623357	Y	LRIT3	CASP6,PLA2G12A	NA	NA	NA	NA	CASP6	548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr4	111086740	111086853	111086804	Y	NA	ELOVL6	NA	NA	NA	NA	ELOVL6	31502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	111114926	111115298	111115104	Y	GAR1,ELOVL6,ELOVL6	ELOVL6	NA	NA	NA	NA	ELOVL6	3057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.63242172299325
chr4	111116750	111117174	111116883	Y	NA	ELOVL6	NA	NA	NA	NA	ELOVL6	1181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr4	111117471	111117868	111117585	Y	NA	ELOVL6	NA	NA	NA	NA	ELOVL6	487	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.73159508614262
chr4	112732930	112733119	112733025	Y	NA	NA	NA	NA	NA	NA	RP11-269F21.3	258735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	113004366	113004696	113004523	Y	NA	RP11-269F21.3	NA	NA	NA	NA	RP11-269F21.3	12512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	113067380	113067784	113067656	Y	LARP7,LARP7,TIFA,AP1AR,C4orf32	C4orf32	NA	NA	NA	NA	C4orf32	2827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	113181018	113181306	113181029	Y	AP1AR,TIFA	AP1AR,ALPK1,TIFA	NA	NA	NA	NA	ALPK1	23359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	113572868	113573168	113573031	Y	NA	LARP7,C4orf21	NA	NA	NA	NA	C4orf21	16717	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	113972367	113972735	113972428	Y	NA	NA	NA	NA	NA	NA	ANK2	235102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	114108421	114108816	114108556	Y	ANK2	NA	NA	NA	NA	NA	RNU1-138P	230663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr4	114355245	114355627	114355568	Y	NA	RNU1-138P	NA	NA	NA	NA	RNU1-138P	15766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	117474098	117474276	117474187	Y	NA	ACTN4P1	NA	NA	NA	NA	ACTN4P1	43041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	117519495	117520605	117520296	Y	NA	ACTN4P1	NA	NA	NA	NA	ACTN4P1	2178	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.368802247538092
chr4	119115424	119115493	119115457	Y	NA	NA	NA	NA	NA	NA	SNHG8	82371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	119187150	119187543	119187362	Y	NA	SNHG8	NA	NA	NA	NA	SNHG8	10321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr4	119629667	119629850	119629760	Y	NA	METTL14	NA	NA	NA	NA	METTL14	25144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	119756174	119756657	119756269	Y	NA	SEC24D	NA	NA	NA	NA	SEC24D	1181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.358448703571195
chr4	120205306	120205694	120205553	Y	NA	C4orf3,FABP2	NA	NA	NA	NA	C4orf3	17906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	120437308	120437708	120437606	Y	NA	NA	NA	NA	NA	NA	RP11-33B1.1	63362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	120444503	120444790	120444647	Y	NA	NA	NA	NA	NA	NA	RP11-33B1.1	70557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	122606332	122606884	122606598	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	9384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	122610538	122611647	122611314	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	4621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	122611926	122612330	122612120	Y	ANXA5	ANXA5	NA	NA	NA	NA	ANXA5	3938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	122632771	122633033	122632919	Y	NA	ANXA5	ANXA5,BBS7,CCNA2	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	ANXA5	16503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	123074024	123074337	123074286	Y	KIAA1109,IL21,IL2	KIAA1109	KIAA1109	K562	ChIA-PET	22265404	KIAA1109	2536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	124073506	124073670	124073588	Y	NUDT6	NA	NA	NA	NA	NA	SPATA5	231277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	124399993	124400470	124400171	Y	NA	NA	NA	NA	NA	NA	SPRY1	84043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208068534263665
chr4	124401120	124401258	124401189	Y	NA	NA	NA	NA	NA	NA	SPRY1	85170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr4	124410194	124410374	124410218	Y	NA	NA	SPATA5	IMR90	Hi-C	24141950	SPRY1	94244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr4	124521229	124521410	124521292	Y	NA	NA	NA	NA	NA	NA	SPRY1	205279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr4	124621616	124621886	124621708	Y	NA	NA	NA	NA	NA	NA	SPRY1	305666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	124764674	124764868	124764687	Y	NA	NA	NA	NA	NA	NA	SPRY1	448724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	125634465	125634726	125634691	Y	NA	ANKRD50	NA	NA	NA	NA	ANKRD50	2578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr4	128752654	128753022	128752839	Y	HSPA4L	PLK4	NA	NA	NA	NA	PLK4	46994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr4	128894970	128895372	128895225	Y	NA	C4orf29,MFSD8	NA	NA	NA	NA	MFSD8	9820	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr4	128990801	128990842	128990822	Y	NA	LARP1B	NA	NA	NA	NA	LARP1B	10378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr4	129088221	129088417	129088319	Y	NA	NA	NA	NA	NA	NA	LARP1B	107798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	129244135	129244496	129244419	Y	NA	PGRMC2,RP11-420A23.1	PGRMC2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-420A23.1	32229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	129474102	129474409	129474120	Y	NA	NA	PGRMC2,PHF17,LARP1B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-420A23.1	262196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	129733811	129733921	129733891	Y	NA	NA	NA	NA	NA	NA	C4orf33	278551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr4	129965980	129966229	129966106	Y	NA	C4orf33,SCLT1	NA	NA	NA	NA	C4orf33	46243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	131082218	131082340	131082279	Y	NA	NA	NA	NA	NA	NA	SCLT1	1069454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	133980064	133980227	133980146	Y	NA	NA	NA	NA	NA	NA	SCLT1	3967300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	138989223	138989276	138989250	Y	NA	NA	NA	NA	NA	NA	LINC00616	60587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	139177153	139177364	139177274	Y	SLC7A11	SLC7A11	SLC7A11	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC7A11	15650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	139831999	139832463	139832295	Y	NA	NA	LOC641365,SLC7A11,LOC641364	IMR90	Hi-C	24141950	CCRN4L	102480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	139960939	139961173	139961057	Y	NAA15,CCRN4L	CCRN4L	NA	NA	NA	NA	CCRN4L	25996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	140003738	140004448	140004114	Y	CCRN4L,RAB33B,ELF2,ELF2	NA	CCRN4L	K562	ChIA-PET	22265404	CCRN4L	68795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.323444752568733
chr4	140035787	140036142	140035958	Y	NA	NA	NA	NA	NA	NA	ELF2	60230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	140278994	140279360	140279178	Y	NA	NA	NA	NA	NA	NA	NDUFC1	57289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	140292626	140292906	140292778	Y	NA	NA	NA	NA	NA	NA	NDUFC1	70921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	140331152	140331480	140331316	Y	NA	RAB33B	NA	NA	NA	NA	RAB33B	40906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	140334690	140334958	140334824	Y	ELF2	RAB33B	NA	NA	NA	NA	RAB33B	37428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	140650307	140650710	140650510	Y	NA	NA	NA	NA	NA	NA	MGST2	65385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	140656102	140656508	140656327	Y	MAML3	NA	NA	NA	NA	NA	MGST2	71180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	141012548	141012827	141012747	Y	MAML3	NA	NA	NA	NA	NA	MAML3	60511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	141016837	141017139	141016990	Y	MAML3	NA	NA	NA	NA	NA	MAML3	56199	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr4	141287573	141287758	141287638	Y	NA	RP11-425I13.1	NA	NA	NA	NA	RP11-425I13.1	1558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	141639566	141639883	141639758	Y	TBC1D9	TBC1D9	NA	NA	NA	NA	TBC1D9	35391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	144271294	144271615	144271412	Y	NA	GAB1	NA	NA	NA	NA	GAB1	15379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr4	144277775	144277945	144277866	Y	NA	GAB1	NA	NA	NA	NA	GAB1	21860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	144401789	144402147	144401968	Y	NA	SMARCA5	NA	NA	NA	NA	SMARCA5	30469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	145956046	145956369	145956259	Y	NA	NA	NA	NA	NA	NA	ABCE1	60715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	145975837	145976119	145976108	Y	NA	ABCE1,ANAPC10	NA	NA	NA	NA	ABCE1	40965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr4	146015172	146015244	146015208	Y	NA	ABCE1,ANAPC10	NA	NA	NA	NA	ABCE1	1840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	146101946	146102251	146102199	Y	NA	OTUD4	ABCE1	K562	ChIA-PET	22265404	OTUD4	2633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr4	146546923	146547210	146547042	Y	ZNF827	MMAA	NA	NA	NA	NA	MMAA	9508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	146656396	146656737	146656614	Y	NA	NA	NA	NA	NA	NA	MMAA	118981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	146729401	146729770	146729628	Y	NA	NA	NA	NA	NA	NA	ZNF827	128017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	146764373	146764705	146764540	Y	NA	NA	NA	NA	NA	NA	ZNF827	93082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	146782687	146782726	146782712	Y	NA	NA	NA	NA	NA	NA	ZNF827	75061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	147196519	147196807	147196609	Y	NA	NA	NA	NA	NA	NA	LSM6	101682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	148654111	148654384	148654270	Y	PRMT10	ARHGAP10	NA	NA	NA	NA	ARHGAP10	2897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr4	148677279	148677473	148677309	Y	NA	ARHGAP10	NA	NA	NA	NA	ARHGAP10	26065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	149364278	149364693	149364534	Y	NR3C2	NR3C2	NA	NA	NA	NA	NR3C2	428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	149467274	149467593	149467420	Y	NA	NA	NA	NA	NA	NA	NR3C2	103424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	151241204	151241585	151241396	Y	NA	NA	NA	NA	NA	NA	LRBA	693294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	151264145	151264674	151264371	Y	NA	NA	NA	NA	NA	NA	LRBA	670205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	151314417	151314500	151314459	Y	NA	NA	NA	NA	NA	NA	LRBA	620379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	151557010	151557332	151557171	Y	NA	NA	NA	NA	NA	NA	LRBA	377547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	151641898	151642513	151641954	Y	NA	NA	NA	NA	NA	NA	LRBA	292366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	151681778	151681989	151681952	Y	NA	NA	NA	NA	NA	NA	LRBA	252890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	151769111	151769151	151769130	Y	NA	NA	NA	NA	NA	NA	LRBA	165728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	152033251	152033470	152033361	Y	NA	RPS3A	NA	NA	NA	NA	RPS3A	14526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	152047125	152047385	152047255	Y	NA	RPS3A	NA	NA	NA	NA	RPS3A	28400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	152081643	152081851	152081838	Y	NA	NA	NA	NA	NA	NA	RPS3A	62918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	152090134	152090652	152090546	Y	SH3D19	NA	NA	NA	NA	NA	RPS3A	71409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	152117073	152117218	152117121	Y	FAM160A1,SH3D19	NA	NA	NA	NA	NA	RPS3A	98348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	152127737	152127987	152127916	Y	NA	NA	NA	NA	NA	NA	RPS3A	109012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr4	152143714	152143771	152143743	Y	SH3D19	NA	NA	NA	NA	NA	RPS3A	124989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	152226044	152226315	152226216	Y	NA	NA	NA	NA	NA	NA	RP11-610P16.1	101672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	152246032	152246165	152246086	Y	FAM160A1	NA	FAM160A1	IMR90	Hi-C	24141950	RP11-610P16.1	81822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.813371921243597
chr4	152367520	152367754	152367585	Y	NA	RP11-610P16.1,FAM160A1	NA	NA	NA	NA	FAM160A1	39152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	153313306	153313343	153313324	Y	NA	NA	NA	NA	NA	NA	FBXW7	141910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	153424227	153424394	153424311	Y	NA	FBXW7,MIR4453	NA	NA	NA	NA	FBXW7	30859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	153445736	153446128	153446118	Y	NA	FBXW7,MIR4453	NA	NA	NA	NA	FBXW7	9125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	153717992	153718074	153718038	Y	NA	TIGD4,ARFIP1	NA	NA	NA	NA	ARFIP1	18903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206422736671297
chr4	154004659	154004831	154004688	Y	NA	NA	FHDC1,ARFIP1	IMR90	Hi-C	24141950	TRIM2	66663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	154035952	154036270	154036100	Y	KIAA0922,TIGD4	TRIM2	KIAA0922,ARFIP1	IMR90	Hi-C	24141950	TRIM2	35224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	154170296	154170804	154170469	Y	TIGD4,KIAA0922	NA	NA	NA	NA	NA	MND1	92997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr4	154269495	154269528	154269512	Y	TRIM2,MND1	MND1	NA	NA	NA	NA	MND1	5694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr4	154571958	154574588	154573746	Y	TLR2	NA	NA	NA	NA	NA	KIAA0922	186460	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	154584497	154584872	154584724	Y	NA	NA	NA	NA	NA	NA	KIAA0922	198999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	155519290	155519521	155519383	Y	FGB,FGA,FGG	PLRG1,FGB,FGA,FGG	NA	NA	NA	NA	FGA	9372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276110443186696
chr4	155577667	155577895	155577781	Y	NA	FGG	FGB	IMR90	Hi-C	24141950	FGG	45548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	157692679	157692824	157692748	Y	NA	NA	NA	NA	NA	NA	PDGFC	197722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	157863056	157863372	157863345	Y	PDGFC	PDGFC	NA	NA	NA	NA	PDGFC	27174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr4	157870715	157871133	157870964	Y	NA	PDGFC	NA	NA	NA	NA	PDGFC	19413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	157889828	157890031	157889884	Y	PDGFC	PDGFC	NA	NA	NA	NA	PDGFC	515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	157893618	157893834	157893797	Y	NA	PDGFC	NA	NA	NA	NA	PDGFC	3072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	159082542	159083127	159082686	Y	NA	RP11-597D13.9,FAM198B,TMEM144	NA	NA	NA	NA	RP11-597D13.9	6777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	159084460	159084729	159084595	Y	NA	RP11-597D13.9,FAM198B,TMEM144	NA	NA	NA	NA	RP11-597D13.9	5175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	159095291	159095702	159095508	Y	FAM198B,FAM198B	RP11-597D13.9,FAM198B,TMEM144	NA	NA	NA	NA	FAM198B	2821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	159112760	159112996	159112870	Y	TMEM144	RP11-597D13.9,FAM198B,TMEM144	NA	NA	NA	NA	TMEM144	7760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr4	159592059	159592445	159592194	Y	NA	ETFDH,C4orf46	NA	NA	NA	NA	C4orf46	652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr4	159641149	159641258	159641192	Y	NA	ETFDH,C4orf46,PPID,FNIP2	NA	NA	NA	NA	PPID	1290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	159643443	159643599	159643521	Y	FNIP2,PPID	PPID,FNIP2	NA	NA	NA	NA	PPID	895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr4	159696369	159696741	159696680	Y	PPID,RAPGEF2,FNIP2	FNIP2	NA	NA	NA	NA	FNIP2	8079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	159748095	159748254	159748211	Y	FNIP2	NA	NA	NA	NA	NA	FNIP2	59805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr4	159925060	159925429	159925240	Y	FNIP2	NA	NA	NA	NA	NA	FNIP2	236770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr4	164464203	164464350	164464219	Y	NPY1R,NPY5R,MARCH1	NA	NA	NA	NA	NA	NAF1	378130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	164471489	164471679	164471583	Y	NA	NA	NA	NA	NA	NA	NAF1	385416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	166298963	166299290	166298992	Y	NA	CPE	NA	NA	NA	NA	CPE	18617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	166315734	166315907	166315821	Y	NA	CPE	NA	NA	NA	NA	CPE	35388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	166360716	166361077	166360721	Y	C4orf39,CPE	NA	NA	NA	NA	NA	CPE	80370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	166397894	166398226	166397967	Y	NA	NA	NA	NA	NA	NA	CPE	117548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	166422422	166422684	166422539	Y	KLHL2,CPE	NA	NA	NA	NA	NA	CPE	142076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	168818156	168818524	168818473	Y	NA	NA	NA	NA	NA	NA	DDX60	419434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	169802596	169802736	169802661	Y	PALLD	NA	NA	NA	NA	NA	CBR4	126690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	169849945	169850177	169850075	Y	NA	NA	NA	NA	NA	NA	CBR4	79249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	169991170	169991417	169991322	Y	NA	NA	SH3RF1,NEK1	IMR90	Hi-C	24141950	CBR4	61744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	169992046	169992220	169992129	Y	NA	NA	SH3RF1,NEK1	IMR90	Hi-C	24141950	CBR4	62620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.301091867042572
chr4	170023521	170023783	170023621	Y	NA	NA	NA	NA	NA	NA	CBR4	94095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	170026437	170026753	170026620	Y	NA	NA	NA	NA	NA	NA	CBR4	97011	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	170132939	170133158	170133049	Y	SH3RF1	NA	NA	NA	NA	NA	SH3RF1	57098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	170172551	170172946	170172870	Y	NA	SH3RF1	NA	NA	NA	NA	SH3RF1	17310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	170570348	170570457	170570384	Y	NA	NEK1,CLCN3	NA	NA	NA	NA	CLCN3	38564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	178112471	178112597	178112534	Y	NA	NA	VEGFC	IMR90	Hi-C	24141950	NEIL3	116393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	178362238	178362457	178362307	Y	NA	AGA	NA	NA	NA	NA	AGA	581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	180979072	180979692	180979379	Y	NA	NA	NA	NA	NA	NA	RNU1-45P	1943057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	183826285	183826336	183826311	Y	NA	DCTD	NA	NA	NA	NA	DCTD	10753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr4	184319940	184320161	184319981	Y	NA	CDKN2AIP	WWC2,CLDN22,CDKN2AIP	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CDKN2AIP	43583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	184423820	184424211	184423984	Y	STOX2	NA	NA	NA	NA	NA	ING2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr4	185115354	185115759	185115584	Y	NA	NA	NA	NA	NA	NA	RP11-290F5.2	157371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr4	185189191	185189340	185189323	Y	IRF2,CASP3	NA	IRF2,CASP3,LOC728175,CCDC111,MLF1IP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-290F5.2	83790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	185201876	185202105	185201989	Y	IRF2	NA	IRF2,CCDC111,MLF1IP,LOC728175,CASP3	IMR90	Hi-C	24141950	RP11-290F5.2	71025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	185214730	185214925	185214872	Y	IRF2	NA	IRF2,CCDC111,CASP3	IMR90	Hi-C	24141950	RP11-290F5.2	58205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	185260528	185261047	185260753	Y	ACSL1,IRF2	RP11-290F5.2	NA	NA	NA	NA	RP11-290F5.2	12083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	185269961	185270243	185270083	Y	ACSL1,IRF2	RP11-290F5.2	NA	NA	NA	NA	RP11-290F5.2	2887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.898669736778122
chr4	185298493	185298859	185298858	Y	NA	RP11-290F5.2	NA	NA	NA	NA	RP11-290F5.2	25363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	185303433	185303616	185303580	Y	NA	RP11-290F5.2	NA	NA	NA	NA	RP11-290F5.2	30303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.427804881659084
chr4	185306912	185307204	185307108	Y	ACSL1,IRF2	RP11-290F5.2	NA	NA	NA	NA	RP11-290F5.2	33782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr4	185331771	185332231	185332067	Y	NA	NA	NA	NA	NA	NA	RP11-290F5.2	58641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	185338413	185338600	185338537	Y	ACSL1,IRF2	NA	NA	NA	NA	NA	IRF2	55134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	185382837	185383066	185382954	Y	NA	IRF2	NA	NA	NA	NA	IRF2	10668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	185393561	185393895	185393573	Y	ACSL1,CASP3,IRF2	NA	NA	NA	NA	NA	IRF2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr4	185573558	185573933	185573744	Y	NA	CASP3	NA	NA	NA	NA	CASP3	4895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	185613623	185613900	185613762	Y	CCDC111	CASP3	NA	NA	NA	NA	CASP3	44960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr4	186455582	186456046	186455940	Y	NA	PDLIM3	NA	NA	NA	NA	PDLIM3	816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	186481104	186481365	186481225	Y	NA	PDLIM3	PDLIM3,SORBS2	IMR90	Hi-C	24141950	PDLIM3	26338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	186594730	186595126	186594900	Y	SORBS2,SORBS2,SORBS2,SORBS2,SORBS2,SNX25	NA	NA	NA	NA	NA	PDLIM3	139964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	186730607	186731122	186730955	Y	NA	NA	NA	NA	NA	NA	TLR3	257184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr4	187543398	187543695	187543547	Y	NA	NA	NA	NA	NA	NA	FAT1	102181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr4	187591076	187591113	187591095	Y	NA	NA	NA	NA	NA	NA	FAT1	54763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	187606948	187607189	187607069	Y	NA	FAT1	NA	NA	NA	NA	FAT1	38687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.314073949339183
chr4	187614690	187615080	187614853	Y	NA	FAT1	NA	NA	NA	NA	FAT1	30796	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr4	187621819	187622251	187622136	Y	NA	FAT1	NA	NA	NA	NA	FAT1	23625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	187648916	187649309	187649113	Y	NA	FAT1	FAT1	MCF7	ChIA-PET	22265404	FAT1	3040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr4	187762182	187762435	187762391	Y	NA	RP11-11N5.1	FAT1,LOC339975	IMR90	Hi-C	24141950	RP11-11N5.1	47688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	189365489	189365865	189365533	Y	NA	NA	NA	NA	NA	NA	RP11-219G10.1	96311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr4	190197516	190197817	190197669	Y	NA	NA	NA	NA	NA	NA	HSP90AA4P	194302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr4	190285262	190285611	190285472	Y	NA	NA	NA	NA	NA	NA	HSP90AA4P	106508	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.86735819689195
chr4	190531603	190532491	190531938	Y	FRG1	NA	NA	NA	NA	NA	RNU1-51P	96377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr4	190942271	190942591	190942322	Y	NA	NA	NA	NA	NA	NA	FRG1	82328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.221050616560276
chr5	360822	360962	360952	Y	EXOC3	NA	NA	NA	NA	NA	C5orf55	80296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	389983	390379	390026	Y	NA	NA	NA	NA	NA	NA	C5orf55	50879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	399875	400445	400189	Y	EXOC3	C5orf55,EXOC3	NA	NA	NA	NA	C5orf55	40813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	557070	557448	557336	Y	NA	NA	SLC9A3,TPPP,CEP72	IMR90	Hi-C	24141950	CEP72	52939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	656184	656577	656381	Y	SLC9A3,ZDHHC11,TPPP	CEP72	NA	NA	NA	NA	CEP72	45797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	669501	669935	669710	Y	TPPP	NA	NA	NA	NA	NA	CEP72	59114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	672861	673336	673024	Y	NA	NA	NA	NA	NA	NA	CEP72	62474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	757060	757343	757251	Y	TPPP	NA	ZDHHC11,SLC9A3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZDHHC11	91758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	758121	758535	758359	Y	TPPP	NA	SLC9A3,ZDHHC11,BRD9,CEP72,TRIP13	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZDHHC11	90566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	759096	759567	759320	Y	TPPP	NA	SLC9A3,ZDHHC11,CEP72,BRD9,TRIP13	IMR90	Hi-C	24141950	ZDHHC11	89534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	784651	785023	784908	Y	ZDHHC11,TPPP	NA	NA	NA	NA	NA	ZDHHC11	64078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.624205091183795
chr5	1086141	1086649	1086569	Y	NA	SLC12A7	NA	NA	NA	NA	SLC12A7	23501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	1103805	1104368	1103973	Y	LPCAT1,SLC12A7	SLC12A7	NA	NA	NA	NA	SLC12A7	5782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	1105639	1106251	1106127	Y	LPCAT1,SLC12A7	SLC12A7	NA	NA	NA	NA	SLC12A7	3899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.273973019422054
chr5	1106623	1107163	1106965	Y	NA	SLC12A7	NA	NA	NA	NA	SLC12A7	2987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	1107341	1108073	1107860	Y	SLC12A7	SLC12A7	NA	NA	NA	NA	SLC12A7	2077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.694052895443956
chr5	1111223	1111556	1111501	Y	LPCAT1,SLC12A7	SLC12A7	NA	NA	NA	NA	SLC12A7	1073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr5	1182870	1183091	1183042	Y	SLC6A19,SLC6A18	NA	LOC100506688,TERT,SLC6A19,TRIP13	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SLC12A7	72720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.725445055772157
chr5	1200004	1200495	1200211	Y	NA	NA	NA	NA	NA	NA	SLC12A7	89854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	1313264	1313453	1313378	Y	NA	TERT,CLPTM1L	NA	NA	NA	NA	TERT	20080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	1470037	1470319	1470275	Y	SLC12A7,LPCAT1	NA	NA	NA	NA	NA	LPCAT1	51773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	1485196	1485502	1485375	Y	SLC12A7,LPCAT1	LPCAT1	SLC6A3	IMR90	Hi-C	24141950	LPCAT1	36590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	1490323	1490754	1490675	Y	SLC12A7,LPCAT1	LPCAT1	NA	NA	NA	NA	LPCAT1	31338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	1522529	1522699	1522639	Y	NA	LPCAT1	NA	NA	NA	NA	LPCAT1	437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	1525802	1526000	1525905	Y	NA	LPCAT1	NA	NA	NA	NA	LPCAT1	3710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	1555263	1555850	1555560	Y	NA	LPCAT1,SDHAP3	NA	NA	NA	NA	LPCAT1	33171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189989473052387
chr5	1562820	1563021	1562959	Y	SLC12A7,LPCAT1	LPCAT1,SDHAP3	NA	NA	NA	NA	SDHAP3	29714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	1565484	1565589	1565562	Y	NA	LPCAT1,SDHAP3	NA	NA	NA	NA	SDHAP3	27146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	1725421	1725568	1725519	Y	NA	NA	MIR4277	IMR90	Hi-C	24141950	MRPL36	73912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	1930136	1931342	1930853	Y	NA	NA	NA	NA	NA	NA	NDUFS6	130622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	5026027	5026363	5026168	Y	NA	NA	NA	NA	NA	NA	KIAA0947	392414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	5351586	5351742	5351664	Y	NA	NA	NA	NA	NA	NA	KIAA0947	67035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr5	5361249	5361374	5361312	Y	NA	NA	NA	NA	NA	NA	KIAA0947	57403	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.400686034038566
chr5	5376440	5376820	5376639	Y	NA	KIAA0947	NA	NA	NA	NA	KIAA0947	41957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr5	5423578	5423857	5423693	Y	KIAA0947	KIAA0947	NA	NA	NA	NA	KIAA0947	4801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr5	6373242	6373393	6373318	Y	NA	MED10	NA	NA	NA	NA	MED10	3314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	6712873	6713977	6713364	Y	NA	NA	NA	NA	NA	NA	SRD5A1	81417	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.00943194736371
chr5	10303912	10303996	10303954	Y	NA	CMBL,MARCH6	NA	NA	NA	NA	CMBL	2142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	10352620	10352938	10352732	Y	NA	CMBL,MARCH6	NA	NA	NA	NA	MARCH6	805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr5	10743646	10743952	10743932	Y	NA	DAP	NA	NA	NA	NA	DAP	15432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr5	10759548	10759882	10759715	Y	NA	DAP	NA	NA	NA	NA	DAP	164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	10857093	10857358	10857239	Y	NA	NA	ROPN1L,DAP,CTNND2,MARCH6,ANKRD33B	IMR90	Hi-C	24141950	DAP	97709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	14035955	14036534	14036234	Y	TRIO	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	93303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	14036813	14036909	14036843	Y	NA	NA	TRIO	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAH5	94161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	14142803	14143164	14142969	Y	TRIO	TRIO	NA	NA	NA	NA	TRIO	992	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr5	14204877	14205144	14204973	Y	FAM105B	NA	NA	NA	NA	NA	TRIO	63066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	14208272	14208510	14208423	Y	FAM105B	NA	NA	NA	NA	NA	TRIO	66461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	14208730	14209007	14208812	Y	NA	NA	NA	NA	NA	NA	TRIO	66919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.341683911524774
chr5	14251046	14251256	14251151	Y	TRIO	NA	NA	NA	NA	NA	TRIO	109235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	14264855	14265210	14264930	Y	TRIO	NA	NA	NA	NA	NA	TRIO	123044	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr5	14639692	14640047	14639871	Y	NA	EEF1A1P13,FAM105B	TRIO,FAM105A	IMR90	Hi-C	24141950	EEF1A1P13	11391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr5	14668408	14668752	14668531	Y	FAM105A,FAM105B	EEF1A1P13,FAM105B	NA	NA	NA	NA	FAM105B	5635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	14676546	14676758	14676685	Y	FAM105B	EEF1A1P13,FAM105B	NA	NA	NA	NA	FAM105B	13773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	14742718	14742956	14742837	Y	NA	NA	NA	NA	NA	NA	RBBP4P1	53553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	14809867	14810211	14810035	Y	FAM105A,FAM105B	RBBP4P1	NA	NA	NA	NA	RBBP4P1	13358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	14872714	14873077	14873012	Y	NA	ANKH	NA	NA	NA	NA	ANKH	2827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	15008718	15008950	15008809	Y	ANKH	NA	FAM105B,ANKH,LOC100130744	IMR90	Hi-C	24141950	ANKH	138831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr5	15451801	15451916	15451863	Y	NA	NA	FBXL7	IMR90	Hi-C	24141950	ANKH	581914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	16698370	16698703	16698671	Y	NA	NA	NA	NA	NA	NA	FAM134B	83203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	16715199	16715528	16715435	Y	NA	NA	NA	NA	NA	NA	FAM134B	100032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	16727981	16728387	16728161	Y	FAM134B	NA	NA	NA	NA	NA	FAM134B	112814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	16733521	16733894	16733888	Y	NA	NA	NA	NA	NA	NA	FAM134B	118354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	16735791	16735955	16735874	Y	NA	NA	NA	NA	NA	NA	FAM134B	120624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr5	16736297	16736738	16736539	Y	NA	NA	NA	NA	NA	NA	FAM134B	121130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.367487978373235
chr5	21392233	21392585	21392409	Y	NA	NA	NA	NA	NA	NA	GUSBP1	52291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	23303766	23303789	23303778	Y	NA	NA	NA	NA	NA	NA	CDH10	1339298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr5	27309667	27310060	27309866	Y	NA	NA	NA	NA	NA	NA	LINC01021	160339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	30694167	30694547	30694365	Y	NA	NA	NA	NA	NA	NA	RPL19P11	357125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	31459519	31459540	31459530	Y	NA	NA	NA	NA	NA	NA	DROSHA	70763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	31894536	31894834	31894609	Y	NA	NA	NA	NA	NA	NA	PDZD2	257019	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	32164142	32164348	32164245	Y	ZFR	GOLPH3	NA	NA	NA	NA	GOLPH3	8108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	32175167	32175567	32175368	Y	NA	GOLPH3,CTD-2186M15.1	NA	NA	NA	NA	GOLPH3	2711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	32283224	32283342	32283283	Y	NA	MTMR12	NA	NA	NA	NA	MTMR12	27773	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	32582779	32582965	32582856	Y	SUB1	NA	ZFR,SUB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SUB1	53040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr5	32592950	32593432	32593186	Y	NA	NA	NA	NA	NA	NA	SUB1	63211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	32768263	32768639	32768422	Y	SUB1	NA	NA	NA	NA	NA	SUB1	238524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	33442170	33442454	33442303	Y	NA	CTD-2203K17.1,TARS	NA	NA	NA	NA	TARS	3368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.238638051599282
chr5	34048471	34048803	34048799	Y	NA	AMACR	NA	NA	NA	NA	AMACR	42251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	34585438	34585952	34585758	Y	RAI14,RAI14	NA	RAI14	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RAI14	68390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.372584957287902
chr5	34586139	34586737	34586416	Y	NA	NA	RAI14	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	RAI14	67605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	34655418	34655812	34655539	Y	NA	RAI14	TTC23L	IMR90	Hi-C	24141950	RAI14	1076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	34949030	34949157	34949062	Y	NA	BRIX1,RAD1,DNAJC21	NA	NA	NA	NA	DNAJC21	21332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	36119586	36119746	36119728	Y	SLC1A3,SLC1A3,C5orf33,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	LMBRD2	30317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	36151218	36151404	36151252	Y	C5orf33,C5orf33,SKP2,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	1127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.472670750456169
chr5	36174356	36174616	36174412	Y	SLC1A3,SLC1A3,RANBP3L,C5orf33,LMBRD2	LMBRD2,SKP2	NA	NA	NA	NA	SKP2	24265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr5	36425659	36425959	36425758	Y	NA	NA	NA	NA	NA	NA	RANBP3L	125443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	36690488	36690876	36690655	Y	NIPBL	NA	NA	NA	NA	NA	SLC1A3	86031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	36722958	36723309	36723211	Y	NIPBL	NA	NIPBL,LOC646719	MCF7	ChIA-PET	22265404	SLC1A3	118501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	36744638	36744936	36744711	Y	NA	NA	LOC646719,NIPBL	MCF7	ChIA-PET	22265404	NIPBL	129925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	37209037	37209204	37209072	Y	C5orf42	C5orf42	NA	NA	NA	NA	C5orf42	38326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	37311676	37311784	37311730	Y	NA	NA	NA	NA	NA	NA	NUP155	57499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	37718043	37718447	37718273	Y	NA	NA	NA	NA	NA	NA	WDR70	340729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	38514652	38514707	38514680	Y	NA	CTD-2263F21.1,MIR3650	NA	NA	NA	NA	MIR3650	40956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	38846956	38846992	38846979	Y	OSMR,OSMR	CTD-2127H9.1,OSMR	NA	NA	NA	NA	OSMR	2996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr5	39069838	39069965	39069908	Y	NA	RICTOR	NA	NA	NA	NA	RICTOR	2545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	39072904	39073873	39073587	Y	FYB,RICTOR	RICTOR	NA	NA	NA	NA	RICTOR	394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr5	39411101	39411451	39411362	Y	NA	C9,DAB2	NA	NA	NA	NA	C9	11519	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	39721328	39721512	39721418	Y	NA	NA	TTC33,PTGER4	IMR90	Hi-C	24141950	DAB2	260926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	40442487	40442716	40442609	Y	PTGER4,PRKAA1	NA	PTGER4	IMR90	Hi-C	24141950	PTGER4	234884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr5	40688188	40688473	40688414	Y	PRKAA1,PTGER4	PTGER4	NA	NA	NA	NA	PTGER4	10588	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	40796420	40796758	40796693	Y	NA	TTC33,RPL37,CARD6	NA	NA	NA	NA	PRKAA1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	41288648	41289018	41288835	Y	NA	C6	NA	NA	NA	NA	C6	29108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	41446274	41446654	41446465	Y	NA	NA	NA	NA	NA	NA	C6	186734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	42465969	42466319	42466144	Y	GHR,GHR,GHR,GHR,GHR,GHR,GHR	GHR	NA	NA	NA	NA	GHR	44090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	42468582	42468751	42468671	Y	NA	GHR	NA	NA	NA	NA	GHR	46703	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	42858219	42858363	42858303	Y	NIM1	SEPP1	NA	NA	NA	NA	SEPP1	27131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	42875979	42876017	42875996	Y	NA	SEPP1	NA	NA	NA	NA	SEPP1	9477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.440626866210933
chr5	42994649	42995346	42995172	Y	NA	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	21185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.527238950910315
chr5	43007637	43008177	43007831	Y	NA	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	8354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr5	43008201	43008438	43008332	Y	NA	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	8093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	43009341	43009652	43009530	Y	ZNF131,C5orf39	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	6879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	43010298	43010802	43010620	Y	GHR,ZNF131,C5orf39	CTD-2035E11.3,AC025171.1	NA	NA	NA	NA	CTD-2035E11.3	5729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr5	43020158	43020617	43020275	Y	C5orf28,ZNF131,C5orf39	CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3	NA	NA	NA	NA	CTD-2035E11.3	3627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr5	43020658	43020829	43020797	Y	ZNF131,C5orf39	CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3	NA	NA	NA	NA	CTD-2035E11.3	4127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	43034859	43034967	43034962	Y	NA	CTD-2035E11.3,AC025171.1,ZNF131,CTD-2201E18.3	LOC648987	MCF7	ChIA-PET	22265404	AC025171.1	4710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	43303282	43303485	43303367	Y	NA	HMGCS1	NA	NA	NA	NA	HMGCS1	8129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	43498058	43498404	43498231	Y	NA	C5orf28,RP11-159F24.3,C5orf34	C5orf28	MCF7	ChIA-PET	22265404	C5orf34	14843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	43636380	43636584	43636517	Y	NA	NNT,NNT-AS1	NA	NA	NA	NA	NNT-AS1	35048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	44805965	44806268	44806131	Y	NA	RP11-53O19.1,MRPS30	NA	NA	NA	NA	RP11-53O19.1	611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	44821100	44821499	44821234	Y	NA	RP11-53O19.1,MRPS30	NA	NA	NA	NA	MRPS30	14073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	44875784	44875973	44875831	Y	NA	NA	NA	NA	NA	NA	MRPS30	68757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	49719324	49719499	49719409	Y	PARP8	NA	NA	NA	NA	NA	ITGA1	2362231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	50263404	50263601	50263575	Y	ISL1	NA	NA	NA	NA	NA	ITGA1	1818129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	52094372	52094720	52094546	Y	NA	ITGA1,PELO	NA	NA	NA	NA	PELO	12598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	52145845	52146161	52146003	Y	NA	NA	NA	NA	NA	NA	CTD-2207L17.1	51577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	52155124	52155267	52155195	Y	NA	CTD-2207L17.1	NA	NA	NA	NA	CTD-2207L17.1	42471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	52327592	52327905	52327807	Y	ITGA2	ITGA2,CTD-2175A23.1	NA	NA	NA	NA	CTD-2175A23.1	43484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	52332019	52332357	52332083	Y	FST,ITGA2	ITGA2,CTD-2175A23.1	NA	NA	NA	NA	CTD-2175A23.1	47911	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	53298305	53298413	53298402	Y	NA	NA	NA	NA	NA	NA	CTD-2081C10.1	184789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	53848607	53848967	53848787	Y	NA	SNX18	NA	NA	NA	NA	SNX18	37018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	53886377	53886761	53886569	Y	SNX18,SNX18	NA	SNX18	IMR90	Hi-C	24141950	SNX18	74788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	54120977	54121197	54121092	Y	NA	NA	SNX18	IMR90	Hi-C	24141950	SNX18	309388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	54729958	54730125	54730050	Y	SKIV2L2,DDX4	NA	NA	NA	NA	NA	RNF138P1	94404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	54817845	54817996	54817921	Y	NA	RNF138P1,PPAP2A	SKIV2L2	IMR90	Hi-C	24141950	RNF138P1	6533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	55287334	55287994	55287973	Y	NA	IL6ST,CTD-2031P19.3	NA	NA	NA	NA	IL6ST	827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr5	55289605	55289989	55289924	Y	IL6ST	IL6ST,CTD-2031P19.3	NA	NA	NA	NA	CTD-2031P19.3	610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.615988459374339
chr5	55384905	55385304	55385215	Y	NA	CTD-2227I18.1	NA	NA	NA	NA	CTD-2227I18.1	32028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	55457979	55458137	55458083	Y	NA	NA	NA	NA	NA	NA	CTD-2227I18.1	105102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	55575946	55576115	55576004	Y	NA	NA	MAP3K1,MIER3	IMR90	Hi-C	24141950	AC022431.1	222784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	55625061	55625202	55625132	Y	NA	NA	MAP3K1,IL6ST	IMR90	Hi-C	24141950	AC022431.1	173697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	55643078	55643375	55643183	Y	NA	NA	MAP3K1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC022431.1	155524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.156459888959544
chr5	55646435	55647044	55646625	Y	NA	NA	MAP3K1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC022431.1	151855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr5	55654713	55655022	55654890	Y	NA	NA	MAP3K1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC022431.1	143877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.742701473990851
chr5	55655118	55655221	55655151	Y	NA	NA	MAP3K1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC022431.1	143678	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.4517132661441
chr5	55737283	55737549	55737459	Y	MAP3K1	NA	MAP3K1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC022431.1	61350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr5	57758033	57758252	57758173	Y	NA	PLK2	NA	NA	NA	NA	PLK2	3946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.278247355344137
chr5	59086263	59086677	59086406	Y	PDE4D	NA	NA	NA	NA	NA	PART1	694863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	59171284	59171310	59171298	Y	NA	NA	NA	NA	NA	NA	PART1	610230	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr5	59173236	59173442	59173374	Y	NA	NA	NA	NA	NA	NA	PART1	608098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	59183388	59183889	59183871	Y	NA	NA	NA	NA	NA	NA	PART1	597651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	59492329	59492580	59492443	Y	NA	NA	NA	NA	NA	NA	PART1	288960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	59618984	59619244	59619114	Y	PDE4D	NA	NA	NA	NA	NA	PART1	162296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	59735221	59735571	59735396	Y	PDE4D	PART1	NA	NA	NA	NA	PART1	45969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	59743173	59743572	59743444	Y	NA	PART1	NA	NA	NA	NA	PART1	37968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr5	59836852	59837180	59836950	Y	ELOVL7	PDE4D	NA	NA	NA	NA	PDE4D	20905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	60315642	60315784	60315678	Y	NA	NA	NA	NA	NA	NA	NDUFAF2	76686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	60597691	60598057	60597813	Y	NA	ZSWIM6	ZSWIM6,C5orf43	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZSWIM6	28043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276110443186696
chr5	60629089	60629454	60629159	Y	NA	ZSWIM6	NA	NA	NA	NA	ZSWIM6	2989	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	60629701	60630027	60629731	Y	ZSWIM6	ZSWIM6	NA	NA	NA	NA	ZSWIM6	3601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	60704594	60705129	60704691	Y	NA	RPL3P6	NA	NA	NA	NA	RPL3P6	18896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	60751661	60751965	60751750	Y	ZSWIM6	NA	NA	NA	NA	NA	RPL3P6	65963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	61843905	61844215	61843940	Y	NA	CKS1B	NA	NA	NA	NA	CKS1B	37596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	61917589	61917885	61917879	Y	NA	NA	NA	NA	NA	NA	CKS1B	111280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	64062726	64062917	64062822	Y	NA	SREK1IP1	NA	NA	NA	NA	CWC27	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	64224703	64224806	64224755	Y	NA	NA	NA	NA	NA	NA	CWC27	161946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	64331292	64332267	64331637	Y	NA	NA	NA	NA	NA	NA	CWC27	268535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	64398874	64399506	64398924	Y	NA	NA	ADAMTS6,CWC27,PPWD1,CENPK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CWC27	336117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr5	64504102	64504227	64504158	Y	NA	NA	NA	NA	NA	NA	CENPK	352771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	64710773	64711167	64710966	Y	NA	NA	NA	NA	NA	NA	CENPK	145831	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr5	64778400	64778738	64778694	Y	NA	NA	NA	NA	NA	NA	CENPK	78260	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	64796548	64796879	64796719	Y	PPWD1,CENPK	NA	NA	NA	NA	NA	CENPK	60119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr5	64800282	64800511	64800289	Y	NA	NA	NA	NA	NA	NA	CENPK	56487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	64809602	64809952	64809754	Y	NA	CENPK,PPWD1	NA	NA	NA	NA	CENPK	47046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	64821420	64821488	64821458	Y	NA	CENPK,PPWD1	NA	NA	NA	NA	CENPK	35510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	65097290	65097569	65097365	Y	ERBB2IP,SGTB	NA	NA	NA	NA	NA	SGTB	80428	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	65220429	65221204	65220462	Y	NA	ERBB2IP	NA	NA	NA	NA	ERBB2IP	126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.279561624508995
chr5	65898344	65898352	65898348	Y	MAST4	MAST4	NA	NA	NA	NA	MAST4	8168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	66511530	66511924	66511850	Y	NA	NA	MAST4,PIK3R1	MCF7	ChIA-PET	22265404	MAST4-AS1	213749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	66531527	66531959	66531721	Y	NA	NA	PIK3R1,MAST4,CD180	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	MAST4-AS1	233746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr5	66786490	66786676	66786582	Y	NA	NA	NA	NA	NA	NA	MAST4-AS1	488709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	67066519	67066839	67066639	Y	NA	NA	NA	NA	NA	NA	PIK3R1	442709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.403154474623518
chr5	67069285	67069755	67069460	Y	PIK3R1	NA	NA	NA	NA	NA	PIK3R1	439793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.415645442355057
chr5	67103829	67104163	67104152	Y	NA	NA	NA	NA	NA	NA	PIK3R1	405385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	67232108	67232276	67232192	Y	NA	NA	NA	NA	NA	NA	PIK3R1	277272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	67242397	67242498	67242448	Y	NA	NA	NA	NA	NA	NA	PIK3R1	267050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	67561361	67561424	67561384	Y	PIK3R1,PIK3R1,PIK3R1	NA	NA	NA	NA	NA	PIK3R1	51813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	68338463	68338878	68338699	Y	NA	CTC-498J12.1,SLC30A5	NA	NA	NA	NA	CTC-498J12.1	815	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr5	68627457	68627610	68627506	Y	NA	CCDC125,CHCHD2P2,RAD17,TAF9	NA	NA	NA	NA	CHCHD2P2	146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	68712626	68712834	68712773	Y	NA	RAD17,TAF9,MARVELD2	NA	NA	NA	NA	MARVELD2	3687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	70772003	70772134	70772073	Y	NA	BDP1	NA	NA	NA	NA	BDP1	22561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr5	70991073	70991448	70991288	Y	NA	NA	NA	NA	NA	NA	MCCC2	109958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.275618817014422
chr5	71404360	71404518	71404455	Y	MAP1B	MAP1B	NA	NA	NA	NA	MAP1B	3299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	71462643	71462861	71462688	Y	NA	NA	NA	NA	NA	NA	MAP1B	61582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	71505945	71506221	71506083	Y	NA	NA	NA	NA	NA	NA	MAP1B	104884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	71643596	71644131	71643868	Y	NA	PTCD2,MRPS27	NA	NA	NA	NA	MRPS27	29123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	71790679	71790815	71790747	Y	NA	NA	NA	NA	NA	NA	MRPS27	176206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	72511984	72512100	72512037	Y	FOXD1	NA	FOXD1,FCHO2,TMEM171,BTF3	IMR90	Hi-C	24141950	TMEM171	97865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	72607592	72607820	72607706	Y	NA	NA	FCHO2,FOXD1,TMEM171,BTF3	IMR90	Hi-C	24141950	FOXD1	134532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	72792808	72793048	72792966	Y	NA	BTF3	NA	NA	NA	NA	BTF3	575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr5	72950370	72950710	72950420	Y	RGNEF	NA	NA	NA	NA	NA	ANKRA2	90859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	73002983	73003378	73003181	Y	NA	NA	NA	NA	NA	NA	ANKRA2	143472	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	73611863	73612159	73611974	Y	NA	NA	RGNEF,ENC1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HEXB	321689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	73798290	73798691	73798490	Y	NA	NA	RGNEF	IMR90	Hi-C	24141950	HEXB	135157	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.414331173190199
chr5	73926262	73926632	73926507	Y	FAM169A	HEXB,ENC1	NA	NA	NA	NA	HEXB	7216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr5	74163639	74163858	74163748	Y	NA	FAM169A	GFM2	IMR90	Hi-C	24141950	FAM169A	2863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr5	74212679	74213001	74212847	Y	NA	CTD-2503O16.1	NA	NA	NA	NA	CTD-2503O16.1	12486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr5	74862624	74863010	74862882	Y	ANKRD31,COL4A3BP,POLK,COL4A3BP,POC5	NA	NA	NA	NA	NA	COL4A3BP	56661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	74883919	74884208	74884013	Y	NA	NA	NA	NA	NA	NA	COL4A3BP	77956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	74997783	74997822	74997793	Y	COL4A3BP,COL4A3BP	POC5	NA	NA	NA	NA	POC5	13491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	75756691	75756710	75756701	Y	NA	NA	NA	NA	NA	NA	IQGAP2	59617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	75763076	75763442	75763238	Y	IQGAP2,S100Z	NA	NA	NA	NA	NA	IQGAP2	66002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	75789158	75789213	75789186	Y	NA	NA	NA	NA	NA	NA	IQGAP2	92084	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr5	75817951	75818026	75817987	Y	NA	NA	NA	NA	NA	NA	IQGAP2	120877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	75832909	75833104	75832996	Y	NA	NA	NA	NA	NA	NA	IQGAP2	135835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	76034658	76035100	76034908	Y	IQGAP2	F2R	NA	NA	NA	NA	F2R	24790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	76086514	76086772	76086643	Y	F2R	F2RL1	NCRUPAR,F2R,IQGAP2	IMR90	Hi-C	24141950	F2RL1	25986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	76086859	76087104	76086921	Y	F2R,F2RL1	F2RL1	NCRUPAR,F2R,IQGAP2	IMR90	Hi-C	24141950	F2RL1	25654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	76102045	76102389	76102284	Y	F2RL1	F2RL1,S100Z	F2RL1,IQGAP2,NCRUPAR,F2R	IMR90	Hi-C	24141950	F2RL1	10369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	76103019	76103387	76103332	Y	F2RL1	F2RL1,S100Z	F2RL1,IQGAP2,NCRUPAR,F2R	IMR90	Hi-C	24141950	F2RL1	9371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr5	76110007	76110333	76110205	Y	NA	F2RL1,S100Z	NA	NA	NA	NA	F2RL1	2425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	76422152	76422524	76422338	Y	NA	ZBED3-AS1,ZBED3	NA	NA	NA	NA	ZBED3	41004	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	76928376	76928558	76928504	Y	NA	WDR41	NA	NA	NA	NA	WDR41	13940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	76958449	76958840	76958645	Y	NA	WDR41	NA	NA	NA	NA	WDR41	44013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	77026226	77026494	77026313	Y	NA	NA	NA	NA	NA	NA	ACTBP2	52211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	77374282	77374304	77374295	Y	NA	NA	NA	NA	NA	NA	TBCA	211678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	77582031	77582256	77582186	Y	AP3B1	AP3B1	NA	NA	NA	NA	AP3B1	6323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	77589539	77589820	77589680	Y	AP3B1	AP3B1	NA	NA	NA	NA	AP3B1	960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	77792703	77793028	77792954	Y	NA	NA	NA	NA	NA	NA	SCAMP1	138364	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	77803150	77803526	77803443	Y	AP3B1,LHFPL2,ARSB	NA	NA	NA	NA	NA	SCAMP1	148811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	77814404	77814787	77814528	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	160065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr5	77815161	77815372	77815267	Y	NA	NA	NA	NA	NA	NA	SCAMP1	160822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	77819717	77819752	77819740	Y	NA	NA	NA	NA	NA	NA	SCAMP1	165378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	77822722	77823939	77823093	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	168383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	77825252	77825732	77825631	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	SCAMP1	170913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	77835986	77836955	77836241	Y	AP3B1,ARSB	NA	NA	NA	NA	NA	CTD-2073O6.1	172950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	77888034	77888302	77888035	Y	LHFPL2	NA	NA	NA	NA	NA	CTD-2073O6.1	121603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	77890894	77891278	77891114	Y	LHFPL2	NA	NA	NA	NA	NA	CTD-2073O6.1	118627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	77945760	77945963	77945862	Y	NA	NA	NA	NA	NA	NA	CTD-2073O6.1	63942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	77974245	77974379	77974312	Y	NA	CTD-2073O6.1	SCAMP1,LHFPL2,ARSB	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTD-2073O6.1	35526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	78182589	78182725	78182657	Y	NA	NA	NA	NA	NA	NA	ARSB	97185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	78204289	78204572	78204406	Y	NA	NA	NA	NA	NA	NA	ARSB	75338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	78270986	78271091	78271032	Y	NA	ARSB	NA	NA	NA	NA	ARSB	8819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr5	78279443	78279488	78279465	Y	NA	ARSB	NA	NA	NA	NA	ARSB	422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr5	78439900	78440059	78439990	Y	NA	BHMT	NA	NA	NA	NA	BHMT	34298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	78744780	78744887	78744834	Y	NA	NA	NA	NA	NA	NA	RP11-342F17.1	59370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	78843402	78843606	78843502	Y	CMYA5,HOMER1	RP11-342F17.1,HOMER1,RP11-342F17.2	THBS4,BHMT2,HOMER1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-342F17.2	20277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.562082804168015
chr5	78857059	78857243	78857149	Y	PAPD4	HOMER1,RP11-342F17.2,PAPD4	NA	NA	NA	NA	RP11-342F17.2	33934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	79421543	79422183	79421865	Y	ZFYVE16,FAM151B	NA	NA	NA	NA	NA	SERINC5	127715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	79428091	79428419	79428255	Y	SERINC5	NA	NA	NA	NA	NA	SERINC5	121479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	79458255	79458620	79458438	Y	MSH3,SERINC5	NA	NA	NA	NA	NA	SERINC5	91278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	79480253	79480678	79480326	Y	NA	NA	NA	NA	NA	NA	SERINC5	69220	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	79506276	79506503	79506404	Y	NA	SERINC5	NA	NA	NA	NA	SERINC5	43395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	79543086	79543324	79543242	Y	ZFYVE16,SERINC5	SERINC5	NA	NA	NA	NA	SERINC5	6574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr5	80260404	80260721	80260547	Y	NA	RASGRF2,CTC-459I6.1	NA	NA	NA	NA	CTC-459I6.1	5678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr5	80263371	80263585	80263478	Y	NA	RASGRF2,CTC-459I6.1	NA	NA	NA	NA	CTC-459I6.1	8645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr5	80302901	80303180	80303045	Y	MSH3,RASGRF2	RASGRF2,CTC-459I6.1	NA	NA	NA	NA	CTC-459I6.1	48175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	80394008	80394030	80394018	Y	NA	NA	NA	NA	NA	NA	CKMT2	133074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	80416491	80416834	80416663	Y	NA	NA	NA	NA	NA	NA	CKMT2	110270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	80551638	80551938	80551834	Y	NA	CKMT2,CKMT2-AS1,ZCCHC9	NA	NA	NA	NA	CKMT2	24534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	80564528	80564843	80564784	Y	NA	CKMT2,CKMT2-AS1,ZCCHC9	NA	NA	NA	NA	CKMT2-AS1	30536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	81653126	81653457	81653257	Y	RPS23	NA	ATP6AP1L,XRCC4,VCAN	IMR90	Hi-C	24141950	RPS23	80730	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.25744996877683
chr5	81655341	81655441	81655346	Y	NA	NA	VCAN,ATP6AP1L,XRCC4	IMR90	Hi-C	24141950	RPS23	82945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr5	81661583	81662026	81661933	Y	NA	NA	VCAN	IMR90	Hi-C	24141950	RPS23	89187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr5	82576471	82576688	82576580	Y	NA	NA	NA	NA	NA	NA	VCAN	188596	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	82769254	82769739	82769524	Y	VCAN	VCAN	NA	NA	NA	NA	VCAN	3970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	82769870	82770125	82769934	Y	TMEM167A,VCAN	VCAN	NA	NA	NA	NA	VCAN	4586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	82770174	82770695	82770300	Y	NA	VCAN	NA	NA	NA	NA	VCAN	4890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.224501797882575
chr5	83604677	83605057	83605023	Y	NA	NA	NA	NA	NA	NA	RNU4-11P	507304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	86417249	86417398	86417310	Y	CCNH,CCNH	NA	MIR4280	K562	ChIA-PET	22265404	RASA1	144307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	86604017	86604207	86604034	Y	RASA1,RASA1	RASA1	NA	NA	NA	NA	RASA1	42312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	86619148	86619498	86619336	Y	NA	NA	NA	NA	NA	NA	RASA1	57443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	86619927	86620237	86620117	Y	NA	NA	NA	NA	NA	NA	RASA1	58222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	86649300	86650123	86649885	Y	NA	NA	NA	NA	NA	NA	CCNH	56713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	86662563	86662890	86662661	Y	RASA1,RASA1	CCNH	NA	NA	NA	NA	CCNH	43946	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	86673186	86673474	86673330	Y	CCNH,CCNH	CCNH	NA	NA	NA	NA	CCNH	33362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	87798983	87799105	87799057	Y	NA	NA	NA	NA	NA	NA	RPS3AP22	123209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	90458384	90458975	90458686	Y	ARRDC3	NA	NA	NA	NA	NA	RNU4-90P	105569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	90662566	90662573	90662570	Y	NA	ARRDC3	NA	NA	NA	NA	ARRDC3	14603	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	90673049	90673245	90673226	Y	ARRDC3	ARRDC3	NA	NA	NA	NA	ARRDC3	3931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	90772639	90772960	90772848	Y	NA	NA	NA	NA	NA	NA	ARRDC3	95463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	92593669	92593984	92593827	Y	NA	NA	FLJ42709	IMR90	Hi-C	24141950	NR2F1	323059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr5	92958001	92958327	92958133	Y	NA	NR2F1	NA	NA	NA	NA	NR2F1	40958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	93256507	93256894	93256879	Y	NA	NA	NA	NA	NA	NA	FAM172A	188510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	93304446	93304744	93304683	Y	NA	NA	NA	NA	NA	NA	FAM172A	140660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	93323557	93323685	93323621	Y	NA	NA	NA	NA	NA	NA	FAM172A	121719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	94038768	94039036	94038830	Y	NA	NA	NA	NA	NA	NA	KIAA0825	86459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	94380006	94380293	94380145	Y	NA	NA	NA	NA	NA	NA	MCTP1	237986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	94395359	94395872	94395571	Y	NA	NA	NA	NA	NA	NA	MCTP1	222407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	94843632	94843977	94843805	Y	NA	TTC37,ARSK	NA	NA	NA	NA	TTC37	44734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	95064673	95064837	95064747	Y	ELL2	RHOBTB3,CTD-2154I11.2	NA	NA	NA	NA	CTD-2154I11.2	1162	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	95094861	95094991	95094889	Y	NA	RHOBTB3,CTD-2154I11.2	GLRX	IMR90	Hi-C	24141950	CTD-2154I11.2	28862	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.2893337552773
chr5	95157129	95157323	95157255	Y	NA	GLRX,C5orf27,AC008592.5	NA	NA	NA	NA	GLRX	420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	95170246	95170624	95170377	Y	GLRX,ELL2	GLRX,C5orf27,AC008592.5	RHOBTB3,GLRX,ARSK,RFESD,SPATA9	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GLRX	13537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr5	95170754	95171173	95170855	Y	GLRX,ELL2	GLRX,C5orf27,AC008592.5	RHOBTB3,GLRX,ARSK,RFESD,SPATA9	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GLRX	14045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.583281518274081
chr5	95177682	95177989	95177809	Y	GLRX,ELL2	GLRX,C5orf27,AC008592.5	GLRX,SPATA9,RFESD,RHOBTB3,C5orf27	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	C5orf27	7947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	95178953	95179190	95179087	Y	GLRX,ELL2	GLRX,C5orf27,AC008592.5	GLRX,SPATA9,RFESD,RHOBTB3,C5orf27	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	C5orf27	6746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	95199166	95199388	95199264	Y	GLRX,ELL2	GLRX,C5orf27,AC008592.5	NA	NA	NA	NA	AC008592.5	3676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.374881967190106
chr5	95227563	95227763	95227704	Y	NA	C5orf27,AC008592.5	NA	NA	NA	NA	AC008592.5	32073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	95240158	95240487	95240414	Y	NA	AC008592.5	NA	NA	NA	NA	AC008592.5	44668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	95294794	95295285	95294896	Y	ELL2	CTD-2337A12.1,ELL2	NA	NA	NA	NA	CTD-2337A12.1	420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr5	95295681	95296335	95296056	Y	ELL2	NA	NA	NA	NA	NA	CTD-2337A12.1,ELL2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.453608948507544
chr5	95298372	95298734	95298686	Y	ELL2	CTD-2337A12.1,ELL2	NA	NA	NA	NA	ELL2	2597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	95427654	95427940	95427807	Y	GLRX,ELL2	NA	NA	NA	NA	NA	RP11-254I22.3	120839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	95555701	95555931	95555845	Y	NA	RP11-254I22.3	ELL2,RHOBTB3	IMR90	Hi-C	24141950	RP11-254I22.3	6922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	95633075	95633361	95633245	Y	GLRX	NA	ELL2,RHOBTB3,MIR583,GLRX,C5orf27,CAST	IMR90	Hi-C	24141950	RP11-254I22.3	84296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	96142552	96142955	96142798	Y	CAST,CAST,LNPEP	ERAP1	NA	NA	NA	NA	ERAP1	749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	96902008	96902041	96902023	Y	NA	NA	NA	NA	NA	NA	CTD-2278B20.1	231264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	98175322	98175662	98175493	Y	NA	NA	NA	NA	NA	NA	RGMB-AS1	68149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	98253335	98253735	98253703	Y	CHD1	CTD-2007H13.3	NA	NA	NA	NA	CTD-2007H13.3	9140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	98262747	98263243	98263080	Y	CHD1	NA	NA	NA	NA	NA	CTD-2007H13.3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	99382569	99383254	99382906	Y	NA	NA	NA	NA	NA	NA	CTD-2001C12.1	485712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.397566381143778
chr5	99387251	99388845	99388529	Y	NA	NA	NA	NA	NA	NA	CTD-2001C12.1	480121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.397566381143778
chr5	99389717	99390411	99390143	Y	NA	NA	NA	NA	NA	NA	CTD-2001C12.1	478555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	102091646	102092087	102091846	Y	NA	PAM	NA	NA	NA	NA	PAM	3961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.310131141844611
chr5	107555103	107555441	107555272	Y	NA	NA	NA	NA	NA	NA	FBXL17	160358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	109125780	109125881	109125831	Y	NA	NA	NA	NA	NA	NA	MAN2A1	102713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	109207541	109207704	109207623	Y	NA	NA	NA	NA	NA	NA	MAN2A1	184474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	109237094	109237311	109237203	Y	NA	NA	NA	NA	NA	NA	MAN2A1	214027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr5	110838164	110838531	110838380	Y	WDR36,CAMK4,STARD4	STARD4	NA	NA	NA	NA	STARD4	7757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	111018976	111019194	111019085	Y	C5orf13,C5orf13,C5orf13,C5orf13,C5orf13,C5orf13	NA	NA	NA	NA	NA	STARD4	172688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	112218687	112219263	112218745	Y	APC	SRP19,REEP5	NA	NA	NA	NA	SRP19	23768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	112219334	112219897	112219506	Y	NA	SRP19,REEP5	NA	NA	NA	NA	SRP19	24415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	112251574	112251628	112251601	Y	NA	REEP5	NA	NA	NA	NA	REEP5	4608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr5	112265559	112265904	112265733	Y	NA	REEP5,DCP2	REEP5	MCF7,K562	ChIA-PET	22265404	REEP5	9323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	112314594	112314663	112314629	Y	NA	DCP2	NA	NA	NA	NA	DCP2	4195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	112509140	112509432	112509369	Y	NA	NA	NA	NA	NA	NA	DCP2	198741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	112857514	112857856	112857617	Y	NA	YTHDC2	NA	NA	NA	NA	YTHDC2	10134	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	114623111	114623418	114623265	Y	NA	PGGT1B,CCDC112	NA	NA	NA	NA	CCDC112	7110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	114749513	114749705	114749609	Y	FEM1C	NA	FEM1C	IMR90	Hi-C	24141950	CCDC112	118985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	114750887	114751289	114751050	Y	NA	NA	FEM1C	IMR90	Hi-C	24141950	CCDC112	120359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	114797286	114797501	114797397	Y	PGGT1B,TICAM2,FEM1C	NA	NA	NA	NA	NA	FEM1C	81090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	114812358	114812481	114812371	Y	CCDC112,CCDC112	NA	FEM1C,CCDC112,TMED7-TICAM2	IMR90	Hi-C	24141950	FEM1C	66110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	114847596	114847935	114847760	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	30656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr5	114848957	114849251	114849109	Y	NA	FEM1C	NA	NA	NA	NA	FEM1C	29340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	114959651	114959879	114959766	Y	COMMD10	TMED7	NA	NA	NA	NA	TMED7-TICAM2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	114970299	114970641	114970577	Y	NA	TMED7-TICAM2,TMED7	NA	NA	NA	NA	TMED7	3610	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.27717431597328
chr5	115420076	115420175	115420113	Y	LOC644100	CTD-2287O16.1,COMMD10	NA	NA	NA	NA	COMMD10	1388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	115421672	115422041	115421857	Y	NA	CTD-2287O16.1,COMMD10	NA	NA	NA	NA	COMMD10	2984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	115719103	115719184	115719144	Y	NA	NA	NA	NA	NA	NA	CTB-118N6.1	177074	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	115794810	115794877	115794844	Y	COMMD10,SEMA6A	NA	NA	NA	NA	NA	CTB-118N6.1	101381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	115860298	115860305	115860302	Y	SEMA6A	CTB-118N6.1,CTB-118N6.2,SEMA6A	NA	NA	NA	NA	CTB-118N6.1	35953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	115908516	115909016	115908646	Y	SEMA6A	CTB-118N6.1,CTB-118N6.2	NA	NA	NA	NA	SEMA6A	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.22096031792676
chr5	118453384	118453586	118453485	Y	NA	CTB-161M19.4,RP11-950K24.2	NA	NA	NA	NA	RP11-950K24.2	8553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	118597128	118597415	118597272	Y	NA	TNFAIP8	NA	NA	NA	NA	TNFAIP8	4972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	118610393	118610883	118610628	Y	DMXL1,TNFAIP8,TNFAIP8	TNFAIP8	NA	NA	NA	NA	TNFAIP8	8006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr5	118678067	118678220	118678144	Y	NA	NA	NA	NA	NA	NA	TNFAIP8	75680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	118836565	118836574	118836570	Y	NA	NA	NA	NA	NA	NA	HSD17B4	50427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr5	119837700	119837812	119837711	Y	PRR16	NA	NA	NA	NA	NA	CTC-507E12.1	823808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	122108155	122108524	122108401	Y	SNX24,SNX2	SNX2	NA	NA	NA	NA	SNX2	167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr5	122177778	122177931	122177816	Y	NA	SNX24	NA	NA	NA	NA	SNX24	644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	122181959	122182300	122182177	Y	NA	SNX24	NA	NA	NA	NA	SNX24	4825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	122322384	122322589	122322416	Y	NA	PPIC	NA	NA	NA	NA	PPIC	47847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	122885327	122885717	122885442	Y	CEP120,CSNK1G3	CSNK1G3	NA	NA	NA	NA	CSNK1G3	39534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	123211449	123211701	123211673	Y	NA	NA	ZNF608	IMR90	Hi-C	24141950	CSNK1G3	365656	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	123987356	123987539	123987440	Y	ZNF608	NA	NA	NA	NA	NA	ZNF608	94961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.16500804919651
chr5	123997171	123997561	123997207	Y	ZNF608	NA	NA	NA	NA	NA	ZNF608	84939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	124085012	124085124	124085092	Y	NA	ZNF608	ZNF608	IMR90	Hi-C	24141950	ZNF608	2512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	125704201	125704675	125704554	Y	C5orf48	GRAMD3	NA	NA	NA	NA	GRAMD3	10377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr5	125709518	125709709	125709633	Y	GRAMD3	GRAMD3	NA	NA	NA	NA	GRAMD3	15694	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	126181513	126181654	126181594	Y	MARCH3	NA	NA	NA	NA	NA	LMNB1	71198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	126217588	126217612	126217598	Y	NA	NA	NA	NA	NA	NA	LMNB1	107273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	126367022	126367218	126367207	Y	NA	MARCH3,C5orf63	NA	NA	NA	NA	MARCH3	2522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	126478879	126479210	126479043	Y	NA	NA	NA	NA	NA	NA	C5orf63	71695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr5	126847905	126848122	126848004	Y	NA	PRRC1	PRRC1	K562,MCF7	ChIA-PET	22265404	PRRC1	3179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	128103121	128103414	128103268	Y	NA	NA	FBN2	IMR90	Hi-C	24141950	ISOC1	325030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	130739357	130739526	130739407	Y	NA	NA	NA	NA	NA	NA	CDC42SE2	160171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	131074214	131074509	131074363	Y	NA	NA	NA	NA	NA	NA	FNIP1	56201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr5	131108111	131108375	131108174	Y	NA	FNIP1	NA	NA	NA	NA	FNIP1	22335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	131439036	131439325	131439215	Y	NA	NA	PDLIM4,IL3	IMR90	Hi-C	24141950	ACSL6	93100	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	131603786	131604244	131603934	Y	NA	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	PDLIM4	12422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr5	131629178	131629624	131629352	Y	FNIP1,IRF1,SLC22A4	PDLIM4,SLC22A4,P4HA2	NA	NA	NA	NA	P4HA2	170	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.853803867981035
chr5	131747457	131747923	131747553	Y	NA	SLC22A5,AC034220.3,C5orf56	NA	NA	NA	NA	C5orf56	3129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	131763102	131763516	131763179	Y	SLC22A4,IRF1	C5orf56	IRF1	IMR90	Hi-C	24141950	C5orf56	18774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	131802496	131802987	131802660	Y	AFF4,SLC22A4,IRF1	IRF1	NA	NA	NA	NA	IRF1	21503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	131810095	131810374	131810235	Y	AFF4,SLC22A4,IRF1	IRF1	NA	NA	NA	NA	IRF1	14116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	131832561	131832909	131832704	Y	AFF4,SLC22A4,IRF1	IRF1	IRF1	IMR90	Hi-C	24141950	IRF1	8071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.429941793816525
chr5	131833993	131834254	131834119	Y	AFF4,SLC22A4,IRF1	IRF1	IRF1	IMR90	Hi-C	24141950	IRF1	9503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	131981394	131981469	131981432	Y	NA	NA	NA	NA	NA	NA	KIF3A	89861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	131998917	131999314	131998999	Y	CCNI2	NA	NA	NA	NA	NA	KIF3A	72016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	132137425	132137486	132137431	Y	SEPT8,SEPT8	SEPT8,SOWAHA,SHROOM1	NA	NA	NA	NA	SEPT8	3447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr5	132323487	132323535	132323508	Y	NA	AFF4,AC010240.3,ZCCHC10	NA	NA	NA	NA	AC010240.3	1685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.411862732605247
chr5	132368718	132369095	132368932	Y	AFF4,ZCCHC10	AC010240.3,ZCCHC10,HSPA4	ZCCHC10,HSPA4,AFF4	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZCCHC10	8422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	132557094	132557415	132557255	Y	NA	NA	NA	NA	NA	NA	HSPA4	171440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	132576270	132576709	132576388	Y	AFF4,ZCCHC10	NA	NA	NA	NA	NA	HSPA4	190616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr5	132581339	132581487	132581431	Y	ANKRD43	NA	NA	NA	NA	NA	HSPA4	195685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	133290184	133290209	133290197	Y	NA	C5orf15,VDAC1	NA	NA	NA	NA	C5orf15	12269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	133331351	133332089	133331904	Y	NA	C5orf15,VDAC1	C5orf15	IMR90	Hi-C	24141950	VDAC1	6735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	133540709	133541017	133540863	Y	NA	SKP1,MIR3661,PPP2CA	NA	NA	NA	NA	MIR3661	18431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	133562679	133563046	133562870	Y	NA	MIR3661,PPP2CA	NA	NA	NA	NA	PPP2CA	2846	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.285149717988735
chr5	133750575	133750781	133750672	Y	NA	CDKL3,UBE2B,CDKN2AIPNL	NA	NA	NA	NA	CDKN2AIPNL	4986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr5	133801466	133801754	133801589	Y	NA	AC005355.2	PHF15,SKP1,CDKN2AIPNL,UBE2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	AC005355.2	38489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311937037181742
chr5	133839310	133839404	133839346	Y	NA	AC005355.2	PHF15,PPP2CA,CDKL3,CDKN2AIPNL,SAR1B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC005355.2	839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr5	133847692	133847829	133847767	Y	NA	AC005355.2	PHF15,CDKN2AIPNL,CDKL3,UBE2B,SKP1,PPP2CA	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	AC005355.2	7449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chr5	133863130	133863560	133863438	Y	NA	AC005355.2	NA	NA	NA	NA	AC005355.2	22887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr5	133880902	133881116	133881009	Y	PCBD2,CDKL3,PHF15	AC005355.2	NA	NA	NA	NA	AC005355.2	40659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	133891612	133892163	133891823	Y	PPP2CA,UBE2B,SEC24A	NA	NA	NA	NA	NA	AC005355.2	51369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	134259128	134259903	134259220	Y	NA	PCBD2,CTB-36O1.7,MTND6P4,MTND5P11,MTND4P12,MIR4461	NA	NA	NA	NA	MTND5P11	246	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.50906959106552
chr5	134261311	134262635	134261858	Y	NA	PCBD2,CTB-36O1.7,MTND6P4,MTND5P11	NA	NA	NA	NA	MTND4P12,MIR4461	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18989917441887
chr5	134469772	134469821	134469797	Y	C5orf20	NA	PCBD2,LOC340073,PITX1,CATSPER3,H2AFY	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PITX1	101269	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.275287288586912
chr5	134527149	134527274	134527245	Y	NA	NA	CATSPER3,PCBD2,H2AFY,PITX1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PITX1	158646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr5	134602658	134602833	134602747	Y	NA	NA	H2AFY,LOC340073,CATSPER3	IMR90	Hi-C	24141950	H2AFY	130771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	134712896	134713181	134712989	Y	SLC25A48,H2AFY	H2AFY	NA	NA	NA	NA	H2AFY	20423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	134727973	134728292	134728105	Y	H2AFY	H2AFY	NA	NA	NA	NA	H2AFY	5312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	134729023	134729250	134729122	Y	H2AFY	H2AFY	NA	NA	NA	NA	H2AFY	4354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	134729736	134729896	134729816	Y	NA	H2AFY	NA	NA	NA	NA	H2AFY	3708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	134824618	134825007	134824746	Y	NA	NA	NA	NA	NA	NA	H2AFY	91014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr5	135309178	135309390	135309247	Y	LECT2	FBXL21	LECT2,SMAD5,SMAD5-AS1,TGFBI,VTRNA2-1	IMR90	Hi-C	24141950	FBXL21	45172	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.01059528536809
chr5	135359253	135359579	135359414	Y	NA	TGFBI	LECT2,TGFBI	IMR90	Hi-C	24141950	TGFBI	3005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	137333439	137333810	137333723	Y	NA	NA	NA	NA	NA	NA	FAM13B	51840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr5	137370531	137370718	137370637	Y	PKD2L2,KDM3B,FAM53C,FAM53C,FAM13B,NME5	FAM13B	PKD2L2	IMR90	Hi-C	24141950	FAM13B	14932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	137795066	137795334	137795165	Y	FAM13B,FAM53C,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	3845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	137799770	137800154	137799916	Y	FAM13B,FAM53C,KDM3B,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.337741104030202
chr5	137800317	137800564	137800421	Y	FAM13B,FAM53C,KDM3B,ETF1,EGR1	REEP2,EGR1	NA	NA	NA	NA	EGR1	1138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.613520018789387
chr5	137827710	137828119	137827817	Y	EGR1	EGR1,ETF1	NA	NA	NA	NA	EGR1	28531	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.73620043888501
chr5	137833063	137833252	137833158	Y	FAM53C,EGR1	EGR1,ETF1	NA	NA	NA	NA	EGR1	33884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr5	137870529	137870619	137870574	Y	FAM53C,KDM3B,ETF1	ETF1,HSPA9	NA	NA	NA	NA	ETF1	6370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	137881069	137881276	137881109	Y	WNT8A,FAM53C,ETF1	ETF1,HSPA9	NA	NA	NA	NA	ETF1	4080	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	137908044	137908328	137908223	Y	NA	ETF1,HSPA9,CTNNA1	NA	NA	NA	NA	HSPA9	805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	138127302	138127500	138127374	Y	NA	AC034243.1	NA	NA	NA	NA	AC034243.1	40304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	138248139	138248403	138248239	Y	NA	NA	NA	NA	NA	NA	AC034243.1	161141	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	138262166	138262549	138262196	Y	NA	NA	NA	NA	NA	NA	AC034243.1	175168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	138263528	138263871	138263700	Y	NA	NA	NA	NA	NA	NA	AC034243.1	176530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	138277949	138278244	138278038	Y	NA	NA	NA	NA	NA	NA	AC034243.1	190951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	138608448	138608665	138608563	Y	LRRTM2,MATR3,MATR3	MATR3,SIL1	NA	NA	NA	NA	MATR3	1007	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	138620359	138620541	138620439	Y	UBE2D2,MATR3	MATR3,SIL1	NA	NA	NA	NA	SIL1	6705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr5	138897527	138897822	138897662	Y	MATR3,MATR3,DNAJC18,PSD2	TMEM173,UBE2D2	DNAJC18,UBE2D2,SLC23A1,SPATA24,PAIP2,C5orf65,TMEM173,ECSCR,CXXC5	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	UBE2D2	6194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.92578807279144
chr5	138911278	138911653	138911466	Y	NA	UBE2D2	SPATA24,DNAJC18,ECSCR,TMEM173,UBE2D2	IMR90	Hi-C	24141950	UBE2D2	7262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	138927819	138928160	138927896	Y	NA	UBE2D2	SPATA24,DNAJC18,ECSCR,TMEM173,UBE2D2	IMR90	Hi-C	24141950	UBE2D2	23803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	138965572	138965797	138965632	Y	NA	NA	NA	NA	NA	NA	CXXC5	59087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.208891177256249
chr5	139015811	139016118	139015905	Y	MATR3,MATR3,MZB1,CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	8766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	139017086	139017541	139017145	Y	CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	7343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr5	139017934	139018665	139018227	Y	MZB1,CXXC5	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	6219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	139022530	139022885	139022670	Y	NA	CXXC5	CXXC5	IMR90	Hi-C	24141950	CXXC5	1999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.164516423024237
chr5	139031397	139032095	139031636	Y	C5orf53,PSD2,NRG2,CXXC5	CXXC5	NA	NA	NA	NA	CXXC5	6513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	139050998	139051193	139051098	Y	NA	CXXC5	NA	NA	NA	NA	CXXC5	26114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	139076374	139076603	139076510	Y	CXXC5	CTB-35F21.2	NA	NA	NA	NA	CTB-35F21.2	47205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr5	139077054	139077268	139077188	Y	CXXC5	CTB-35F21.2	NA	NA	NA	NA	CTB-35F21.2	46540	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.06663734112466
chr5	139077393	139077627	139077507	Y	NA	CTB-35F21.2	NA	NA	NA	NA	CTB-35F21.2	46181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	139078128	139078514	139078502	Y	C5orf53,DNAJC18,CXXC5,NRG2,PSD2	CTB-35F21.2	NA	NA	NA	NA	CTB-35F21.2	45294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	139088295	139089196	139088669	Y	NA	CTB-35F21.2	CXXC5	K562	ChIA-PET	22265404	CTB-35F21.2	34612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr5	139090416	139090834	139090571	Y	MATR3,MATR3,CXXC5	CTB-35F21.2	CXXC5	K562	ChIA-PET	22265404	CTB-35F21.2	32974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr5	139090940	139091124	139091019	Y	NA	CTB-35F21.2	CXXC5	K562	ChIA-PET	22265404	CTB-35F21.2	32684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr5	139113196	139113643	139113518	Y	C5orf53,PSD2	CTB-35F21.2	DNAJC18,UBE2D2,CXXC5	IMR90	Hi-C	24141950	CTB-35F21.2	10165	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.85585048150496
chr5	139145441	139145496	139145460	Y	C5orf53,DNAJC18,CXXC5,NRG2,PSD2	CTB-35F21.2,PSD2	UBE2D2,CXXC5,NRG2,CYSTM1,PSD2,DNAJC18	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CTB-35F21.2	21633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	139167686	139167904	139167758	Y	NA	CTB-35F21.2,PSD2	CXXC5,UBE2D2,DNAJC18,NRG2,PSD2,CYSTM1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	PSD2	5502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	139488718	139489038	139488945	Y	NA	PURA,IGIP	NRG2,CYSTM1,IGIP	IMR90	Hi-C	24141950	PURA	3356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	139598972	139599011	139598993	Y	ANKHD1	NA	NA	NA	NA	NA	PFDN1	81695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	139629538	139629745	139629587	Y	NA	NA	NA	NA	NA	NA	PFDN1	50961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	139636160	139636260	139636251	Y	SRA1	PFDN1	NA	NA	NA	NA	PFDN1	44446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr5	139638984	139639383	139639269	Y	C5orf32,ZMAT2,SRA1,IK,HARS2,APBB3,ANKHD1	PFDN1	NA	NA	NA	NA	PFDN1	41323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	139641396	139641769	139641570	Y	SRA1,HBEGF,CD14,CD14,APBB3,ANKHD1	PFDN1	NA	NA	NA	NA	PFDN1	38937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	139782360	139782578	139782471	Y	NA	RNU4-14P,ANKHD1,ANKHD1-EIF4EBP3	NA	NA	NA	NA	ANKHD1-EIF4EBP3	2867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.446214959690673
chr5	139933633	139933898	139933723	Y	ANKHD1,ZMAT2,IK,HARS2,CD14,CD14,SRA1,APBB3	EIF4EBP3,SRA1,SLC35A4,APBB3	NA	NA	NA	NA	SRA1	1997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr5	140090601	140091006	140090806	Y	NA	WDR55,HARS2,HARS,ZMAT2,VTRNA1-1,VTRNA1-3	NA	NA	NA	NA	VTRNA1-1	1741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.445392316698089
chr5	140098281	140098628	140098472	Y	NA	HARS2,HARS,ZMAT2,VTRNA1-1,VTRNA1-3	NA	NA	NA	NA	VTRNA1-3	5115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.257699853547907
chr5	140381128	140381335	140381222	Y	NA	NA	NA	NA	NA	NA	PCDHB2	90892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	140648312	140648399	140648356	Y	NA	PCDHB14,PCDHB15,TAF7	NA	NA	NA	NA	PCDHB15	25165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	140714021	140714065	140714043	Y	PCDHB12,PCDHB15,PCDHGC4	TAF7,PCDHGA1,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2	NA	NA	NA	NA	PCDHGA1	5769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	140910138	140910894	140910494	Y	NA	NA	NA	NA	NA	NA	PCDHGC3	56558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	141209314	141209613	141209459	Y	NA	PCDH1	PCDH1,ARAP3,FCHSD1,LOC729080,RNF14	IMR90	Hi-C	24141950	PCDH1	47198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	141404371	141404781	141404694	Y	DIAPH1,FCHSD1	GNPDA1	GNPDA1,NDFIP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GNPDA1	13765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	141659754	141659954	141659854	Y	NA	AC005592.2,SPRY4	SPRY4,FGF1	IMR90	Hi-C	24141950	AC005592.2	42904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	141684732	141684818	141684775	Y	PCDH1,SPRY4	AC005592.2,SPRY4	NA	NA	NA	NA	AC005592.2	18040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	141706626	141706892	141706857	Y	NA	AC005592.2,SPRY4	NA	NA	NA	NA	SPRY4	2606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	141736379	141736797	141736670	Y	ARHGAP26	AC005592.2,SPRY4	NDFIP1,FGF1,SPRY4,GNPDA1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	SPRY4	32359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.895550083883335
chr5	141825669	141826086	141825870	Y	SPRY4	NA	NDFIP1,SPRY4,FGF1	IMR90	Hi-C	24141950	SPRY4	121649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	141917041	141917377	141917209	Y	NA	NA	NDFIP1,SPRY4,FGF1	IMR90	Hi-C	24141950	SPRY4	213021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	141977799	141977936	141977865	Y	NA	NA	NA	NA	NA	NA	ARHGAP26	170013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	142157420	142157683	142157517	Y	NA	ARHGAP26	NA	NA	NA	NA	ARHGAP26	9471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	142174878	142175359	142175023	Y	ARHGAP26	ARHGAP26	NA	NA	NA	NA	ARHGAP26	26929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	142221928	142222177	142222053	Y	ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	73979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	142315332	142315934	142315386	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	167383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr5	142318662	142319068	142318747	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	170713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	142331202	142331597	142331265	Y	NA	NA	NA	NA	NA	NA	ARHGAP26	183253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	142339728	142340345	142340014	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	191779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	142361615	142361922	142361810	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	ARHGAP26	213666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	142415813	142416201	142415818	Y	NA	NA	NA	NA	NA	NA	ARHGAP26	267864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	142504289	142504528	142504400	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	RPL7P21	205642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	142534225	142534485	142534355	Y	NA	NA	NA	NA	NA	NA	RPL7P21	175685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	142535933	142536319	142536126	Y	NA	NA	NA	NA	NA	NA	RPL7P21	173851	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	142541504	142541934	142541585	Y	NR3C1,NR3C1,ARHGAP26	NA	NA	NA	NA	NA	RPL7P21	168236	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr5	142580387	142580630	142580509	Y	NA	NA	NA	NA	NA	NA	RPL7P21	129540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	142623562	142623962	142623719	Y	NA	NA	NA	NA	NA	NA	RPL7P21	86208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	142785420	142785784	142785543	Y	NR3C1	NR3C1	ARHGAP26	IMR90	Hi-C	24141950	NR3C1	27293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr5	142974978	142975222	142975128	Y	NR3C1,NR3C1	NA	ARHGAP26,NR3C1,KCTD16,YIPF5,HMHB1	IMR90	Hi-C	24141950	NR3C1	161901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	145166780	145167167	145167131	Y	GRXCR2	PRELID2	NA	NA	NA	NA	PRELID2	45765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	145236184	145236553	145236241	Y	PRELID2,PRELID2	PRELID2	NA	NA	NA	NA	PRELID2	23252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	145326011	145326414	145326305	Y	NA	SH3RF2	NA	NA	NA	NA	SH3RF2	11869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	145498086	145498488	145498483	Y	NA	NA	NA	NA	NA	NA	LARS	61735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	145827727	145827826	145827802	Y	NA	TCERG1	GPR151	IMR90	Hi-C	24141950	TCERG1	2853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr5	147024840	147025034	147024978	Y	DPYSL3,JAKMIP2	NA	NA	NA	NA	NA	SPINK1	184315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr5	147201124	147201544	147201446	Y	JAKMIP2	SPINK1	NA	NA	NA	NA	SPINK1	7805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	147218600	147219023	147218871	Y	SPINK1	SPINK1	JAKMIP2	IMR90	Hi-C	24141950	SPINK1	9251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	147343599	147343802	147343701	Y	FBXO38	NA	NA	NA	NA	NA	SPINK1	134250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	148540754	148540865	148540805	Y	ABLIM3	ABLIM3	AFAP1L1	IMR90	Hi-C	24141950	ABLIM3	21708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.355820165241481
chr5	148552711	148552897	148552801	Y	NA	ABLIM3	AFAP1L1	IMR90	Hi-C	24141950	ABLIM3	33665	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.44382765115495
chr5	148600871	148601299	148600941	Y	ARHGEF37,SH3TC2	AFAP1L1	AFAP1L1	IMR90	Hi-C	24141950	AFAP1L1	48135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	148700478	148700631	148700542	Y	NA	GRPEL2,PCYOX1L	GRPEL2,PCYOX1L	IMR90	Hi-C	24141950	GRPEL2	22362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.249814750165962
chr5	148760371	148760619	148760464	Y	NA	GRPEL2,PCYOX1L,IL17B,MIR143,MIR145	NA	NA	NA	NA	IL17B	21146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.484670092015434
chr5	148822199	148822381	148822290	Y	NA	IL17B,MIR143,MIR145	NA	NA	NA	NA	MIR145	14350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr5	148832906	148833066	148832986	Y	NA	MIR143,MIR145	NA	NA	NA	NA	MIR145	25057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr5	148835583	148835880	148835720	Y	NA	MIR143,MIR145	NA	NA	NA	NA	MIR145	27734	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.317033504489209
chr5	148836415	148836621	148836572	Y	NA	MIR143,MIR145	NA	NA	NA	NA	MIR145	28566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	149110836	149111455	149111198	Y	ARHGEF37,SLC26A2,CDX1,PPARGC1B	PPARGC1B	NA	NA	NA	NA	PPARGC1B	2975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	149111581	149111664	149111645	Y	NA	PPARGC1B	NA	NA	NA	NA	PPARGC1B	3720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	149111957	149112473	149112231	Y	AFAP1L1,IL17B,PPARGC1B	PPARGC1B	NA	NA	NA	NA	PPARGC1B	4096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	149379132	149379170	149379142	Y	NA	SLC26A2,HMGXB3,TIGD6	NA	NA	NA	NA	TIGD6	402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	149422019	149422297	149422100	Y	NA	HMGXB3,TIGD6	NA	NA	NA	NA	TIGD6	43289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	149518246	149518623	149518550	Y	NA	PDGFRB	NA	NA	NA	NA	PDGFRB	14812	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.06630632430435
chr5	149522462	149523132	149522666	Y	NA	PDGFRB	NA	NA	NA	NA	PDGFRB	10303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.204285824513855
chr5	149525289	149525473	149525405	Y	SYNPO	PDGFRB	NA	NA	NA	NA	PDGFRB	7962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	149533722	149534084	149534015	Y	SYNPO,SYNPO,PDGFRB	PDGFRB	NA	NA	NA	NA	PDGFRB	287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	149680761	149680933	149680835	Y	NA	ARSI	NA	NA	NA	NA	ARSI	35937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	149838456	149838698	149838517	Y	SYNPO,ZNF300,SLC6A7	CD74,RPS14,NDST1,CTC-367J11.1	NDST1,MYOZ3,SYNPO,RPS14	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RPS14	11137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	149921548	149921861	149921663	Y	NA	NA	NA	NA	NA	NA	SYNPO	56781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	150142965	150143377	150143063	Y	CD74,CD74,TNIP1,CCDC69,RBM22,DCTN4,DCTN4,C5orf62	DCTN4	DCTN4,C5orf62	MCF7,K562	ChIA-PET	22265404	DCTN4	6294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	150161319	150161633	150161505	Y	ANXA6,C5orf62	DCTN4	NA	NA	NA	NA	DCTN4	24648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr5	150163031	150163501	150163387	Y	TNIP1,CCDC69,RBM22,DCTN4,C5orf62	DCTN4	NA	NA	NA	NA	DCTN4	26360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	150396267	150396571	150396486	Y	RBM22,DCTN4,DCTN4,SLC36A1,CCDC69,TNIP1	GPX3	NA	NA	NA	NA	GPX3	1553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	150401918	150402484	150402308	Y	GPX3,TNIP1	GPX3	NA	NA	NA	NA	GPX3	3794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	150403259	150403641	150403341	Y	NA	GPX3	NA	NA	NA	NA	GPX3	5135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	150403932	150404163	150404140	Y	NA	GPX3	NA	NA	NA	NA	GPX3	5808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	150461516	150462400	150461744	Y	RBM22,DCTN4,DCTN4,C5orf62,SLC36A1,CCDC69,TNIP1	TNIP1	NA	NA	NA	NA	TNIP1	8738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	150464543	150466084	150465220	Y	RBM22,DCTN4,DCTN4,SLC36A1,CCDC69,TNIP1	TNIP1	NA	NA	NA	NA	TNIP1	5054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	150476545	150477196	150477013	Y	RBM22,DCTN4,DCTN4,TNIP1,CCDC69	TNIP1	NA	NA	NA	NA	TNIP1	5407	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	150505089	150505277	150505181	Y	RBM22,DCTN4,DCTN4,TNIP1,CCDC69,ANXA6	TNIP1,ANXA6	TNIP1	IMR90	Hi-C	24141950	ANXA6	30166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	150533385	150533816	150533573	Y	NA	ANXA6	NA	NA	NA	NA	ANXA6	1627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	150536063	150536329	150536162	Y	ANXA6	ANXA6	NA	NA	NA	NA	ANXA6	620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	150625199	150625215	150625207	Y	NA	GM2A,CCDC69	ANXA6,CCDC69	IMR90	Hi-C	24141950	CCDC69	23493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr5	150630662	150630980	150630918	Y	NA	GM2A,CCDC69	NA	NA	NA	NA	CCDC69	28956	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.11815568779526
chr5	151078700	151079028	151078874	Y	ATOX1,SPARC	SPARC	SPARC,ATOX1	IMR90	Hi-C	24141950	SPARC	13974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	151129219	151129502	151129338	Y	SLC36A1	RP11-54C4.1,G3BP1,ATOX1	NA	NA	NA	NA	RP11-54C4.1	14437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	151200780	151201112	151200835	Y	GLRA1	NA	NA	NA	NA	NA	ATOX1	50687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	151213355	151213633	151213423	Y	NA	NA	NA	NA	NA	NA	ATOX1	63262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	152238072	152238143	152238108	Y	NA	NA	NA	NA	NA	NA	ATOX1	1087979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	152494885	152495216	152495051	Y	NA	NA	NA	NA	NA	NA	MFAP3	921250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	152822087	152822411	152822258	Y	NA	NA	GRIA1	IMR90	Hi-C	24141950	MFAP3	594055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	153743049	153743076	153743063	Y	NA	NA	NA	NA	NA	NA	SAP30L-AS1	80334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	153807428	153807565	153807497	Y	NA	SAP30L-AS1,SAP30L	NA	NA	NA	NA	SAP30L-AS1	15845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	153809274	153809597	153809436	Y	NA	SAP30L-AS1,SAP30L	NA	NA	NA	NA	SAP30L-AS1	13813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr5	153855980	153856061	153856023	Y	HAND1	SAP30L-AS1,SAP30L	NA	NA	NA	NA	SAP30L	32463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	154062607	154063000	154062805	Y	GEMIN5	LARP1	LARP1,C5orf4	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LARP1	27462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	154205315	154205569	154205444	Y	KIF4B,GEMIN5	CNOT8	NA	NA	NA	NA	CNOT8	29544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	154274946	154275114	154275030	Y	NA	CNOT8,GEMIN5,MRPL22	NA	NA	NA	NA	CNOT8	39833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	154871450	154872048	154871744	Y	KIF4B	NA	NA	NA	NA	NA	MRPL22	552820	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.2521928921174
chr5	156471573	156471840	156471835	Y	NA	HAVCR1	NA	NA	NA	NA	HAVCR1	12290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	156476668	156477024	156476779	Y	HAVCR1,HAVCR1	HAVCR1	NA	NA	NA	NA	HAVCR1	7106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr5	156503614	156503701	156503659	Y	NA	HAVCR1	NA	NA	NA	NA	HAVCR1	19484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	156718541	156718931	156718583	Y	HAVCR2,ADAM19,CYFIP2,CYFIP2,CYFIP2	CYFIP2	NA	NA	NA	NA	CYFIP2	27452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr5	156814689	156815040	156814693	Y	NA	NA	NA	NA	NA	NA	NIPAL4	69987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	156911705	156911968	156911830	Y	NIPAL4,ADAM19	NIPAL4	NA	NA	NA	NA	NIPAL4	26678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	157257409	157257732	157257678	Y	NA	CLINT1	NA	NA	NA	NA	CLINT1	26451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	157284724	157285025	157284835	Y	NIPAL4,ADAM19	CLINT1	LSM11	IMR90	Hi-C	24141950	CLINT1	541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	158491555	158491917	158491726	Y	EBF1	NA	NA	NA	NA	NA	CTB-11I22.1	143012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	158611896	158612266	158612182	Y	IL12B,RNF145,RNF145,RNF145,RNF145,RNF145	CTB-11I22.1,RNF145	NA	NA	NA	NA	CTB-11I22.1	22663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	158632432	158632664	158632544	Y	NA	CTB-11I22.1,RNF145	NA	NA	NA	NA	CTB-11I22.1	2265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	159451021	159451194	159451125	Y	NA	TTC1	NA	NA	NA	NA	TTC1	16901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.282681277403783
chr5	159533500	159533764	159533742	Y	NA	PWWP2A	NA	NA	NA	NA	PWWP2A	10666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	159592107	159592427	159592336	Y	NA	PWWP2A	TTC1,CCNJL,PWWP2A,FABP6,C1QTNF2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PWWP2A	47677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	159815159	159815328	159815245	Y	NA	CCNJL,C5orf54,SLU7,PTTG1	NA	NA	NA	NA	C5orf54	9776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	159894087	159894191	159894139	Y	NA	SLU7,PTTG1,MIR146A	NA	NA	NA	NA	MIR146A	812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	159896720	159897088	159896809	Y	NA	PTTG1,MIR146A	NA	NA	NA	NA	MIR146A	3445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	159904569	159904939	159904751	Y	NA	MIR146A	NA	NA	NA	NA	MIR146A	11294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	162428835	162428856	162428847	Y	NA	NA	NA	NA	NA	NA	RP11-541P9.3	433476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	162507124	162507145	162507136	Y	NA	NA	NA	NA	NA	NA	RP11-541P9.3	355187	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	162811410	162811429	162811421	Y	NA	NA	NA	NA	NA	NA	RP11-541P9.3	50903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	166391169	166391528	166391349	Y	NA	NA	NA	NA	NA	NA	RPL7P20	936853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	167741798	167742197	167741960	Y	WWC1	WWC1	NA	NA	NA	NA	WWC1	25142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr5	167744761	167745078	167744891	Y	WWC1	WWC1	NA	NA	NA	NA	WWC1	28105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	168051900	168052268	168052099	Y	NA	PANK3,CTC-575D19.1	SLIT3	IMR90	Hi-C	24141950	CTC-575D19.1	10583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr5	171094849	171095086	171094946	Y	NA	NA	FBXW11,FGF18	IMR90	Hi-C	24141950	NPM1	282729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	171326428	171326478	171326475	Y	NA	NA	NA	NA	NA	NA	FBXW11	105399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	171580373	171580774	171580468	Y	STK10	STK10	NA	NA	NA	NA	STK10	32616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	171581047	171581366	171581364	Y	NA	STK10	NA	NA	NA	NA	STK10	32024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	171601698	171602038	171601921	Y	NA	STK10	NA	NA	NA	NA	STK10	11352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr5	171602273	171602685	171602548	Y	STK10	STK10	NA	NA	NA	NA	STK10	10705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr5	171606484	171606964	171606720	Y	UBTD2,STK10	STK10	NA	NA	NA	NA	STK10	6426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	171660495	171660734	171660615	Y	NA	STK10,UBTD2	NA	NA	NA	NA	STK10	47105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	171681735	171682053	171681977	Y	NA	UBTD2	NA	NA	NA	NA	UBTD2	27022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.510965785036168
chr5	171709316	171709633	171709569	Y	NA	UBTD2	NA	NA	NA	NA	UBTD2	241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	171847636	171847998	171847816	Y	NA	SH3PXD2B	NA	NA	NA	NA	SH3PXD2B	31529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr5	172160207	172160396	172160286	Y	NA	DUSP1	ERGIC1,ATP6V0E1,C5orf41,DUSP1,NEURL1B,BNIP1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DUSP1	35802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	172192263	172193766	172192583	Y	UBTD2,ERGIC1,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	2432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	172198749	172199959	172199636	Y	UBTD2,ERGIC1,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	2551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr5	172200337	172200842	172200639	Y	UBTD2,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	4139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	172202171	172203025	172202666	Y	UBTD2,ERGIC1,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	5973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr5	172203413	172203849	172203459	Y	UBTD2,C5orf41,DUSP1	DUSP1	NA	NA	NA	NA	DUSP1	7215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	172205264	172205447	172205353	Y	UBTD2,C5orf41,DUSP1	DUSP1	DUSP1,ERGIC1,LOC100268168,ATP6V0E1,RPL26L1	IMR90	Hi-C	24141950	DUSP1	9066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	172216221	172216413	172216309	Y	C5orf41,DUSP1	DUSP1,ERGIC1	ERGIC1,DUSP1,LOC100268168,RPL26L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP1	20023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr5	172217004	172217294	172217240	Y	NA	DUSP1,ERGIC1	ERGIC1,DUSP1,LOC100268168,RPL26L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP1	20806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	172221140	172221536	172221340	Y	C5orf41,DUSP1	DUSP1,ERGIC1	ERGIC1,DUSP1,LOC100268168,RPL26L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP1	24942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	172228151	172228566	172228394	Y	DUSP1	DUSP1,ERGIC1	DUSP1,ERGIC1,LOC100268168,RPL26L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ERGIC1	30712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	172234136	172234644	172234380	Y	NA	DUSP1,ERGIC1	DUSP1,ERGIC1,LOC100268168,RPL26L1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ERGIC1	24634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr5	172257827	172258390	172258174	Y	DUSP1,C5orf41,ERGIC1	ERGIC1	NA	NA	NA	NA	ERGIC1	888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	172288216	172288483	172288386	Y	DUSP1,C5orf41,ERGIC1	ERGIC1	NA	NA	NA	NA	ERGIC1	28938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	172313877	172314602	172314167	Y	DUSP1,C5orf41	NA	NA	NA	NA	NA	ERGIC1	54599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	172327024	172327318	172327167	Y	NA	NA	NA	NA	NA	NA	RPL26L1	56414	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	172329840	172330200	172330006	Y	DUSP1,C5orf41,ATP6V0E1,ERGIC1	NA	NA	NA	NA	NA	RPL26L1	53532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	172443523	172443809	172443650	Y	DUSP1,C5orf41	ATP6V0E1	NA	NA	NA	NA	ATP6V0E1	34763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	172710965	172711353	172711102	Y	NA	STC2	ATP6V0E1,BNIP1,LOC285593,NKX2-5,NEURL1B,RPL26L1,STC2,C5orf41	IMR90	Hi-C	24141950	STC2	43153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	172729503	172729731	172729610	Y	NA	STC2	NA	NA	NA	NA	STC2	24775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	172730964	172731211	172731128	Y	NA	STC2	NA	NA	NA	NA	STC2	23295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr5	172881373	172881649	172881564	Y	CPEB4	NA	LOC285593,STC2,BOD1,CPEB4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	STC2	126867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	172883833	172884047	172883943	Y	CPEB4	NA	LOC285593,STC2,BOD1,NKX2-5	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	STC2	129327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	173031200	173031306	173031275	Y	NA	BOD1	NA	NA	NA	NA	BOD1	10357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	173098193	173098638	173098333	Y	CPEB4	NA	CPEB4,C5orf47,HMP19	IMR90	Hi-C	24141950	BOD1	56530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr5	173169995	173170330	173170163	Y	NA	CTB-43E15.3	CPEB4	IMR90	Hi-C	24141950	CTB-43E15.3	884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	173189921	173190166	173190045	Y	CPEB4	CTB-43E15.3	CPEB4,C5orf47	IMR90	Hi-C	24141950	CTB-43E15.3	18707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr5	173191567	173191754	173191643	Y	CPEB4	CTB-43E15.3	CPEB4,C5orf47	IMR90	Hi-C	24141950	CTB-43E15.3	20353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr5	173193377	173193650	173193560	Y	NA	CTB-43E15.3	CPEB4	IMR90	Hi-C	24141950	CTB-43E15.3	22163	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.383430127427072
chr5	173199242	173199802	173199475	Y	CPEB4	CTB-43E15.3	CPEB4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CTB-43E15.3	28028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	173208911	173209406	173209234	Y	CPEB4	CTB-43E15.3	CPEB4	IMR90	Hi-C	24141950	CTB-43E15.3	37697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr5	173251298	173251668	173251379	Y	NA	NA	BOD1,CPEB4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CPEB4	61615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr5	173252274	173252478	173252451	Y	NA	NA	BOD1,CPEB4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CPEB4	60805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr5	173300199	173300299	173300265	Y	NA	CPEB4	BOD1,CPEB4	IMR90	Hi-C	24141950	CPEB4	12984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	173369010	173369228	173369031	Y	NA	NA	NA	NA	NA	NA	CPEB4	55727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr5	174906234	174906555	174906308	Y	NA	SFXN1	NA	NA	NA	NA	SFXN1	4169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	175302369	175302773	175302579	Y	DRD1,CPLX2,C5orf25,CPLX2	NA	NA	NA	NA	NA	CPLX2	81056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	175347355	175347516	175347492	Y	NA	NA	CPLX2	IMR90	Hi-C	24141950	CPLX2	126042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	175962179	175962700	175962413	Y	UIMC1,UIMC1,UIMC1,HK3,HIGD2A,RNF44,CDHR2	RNF44,CDHR2	FAF2	MCF7	ChIA-PET	22265404	RNF44	326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	175974830	175975038	175974917	Y	UIMC1,UIMC1,UIMC1,HK3,C5orf25,RNF44,CDHR2	RNF44,CDHR2	NA	NA	NA	NA	CDHR2	7318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	176330386	176330599	176330516	Y	UIMC1,UIMC1,UIMC1,RAB24,NSD1,HK3	NA	NA	NA	NA	NA	UIMC1	117035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	176359562	176359884	176359876	Y	RNF44,UIMC1,UIMC1,UIMC1,NSD1,GRK6	NA	NA	NA	NA	NA	UIMC1	87750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	176361465	176361828	176361647	Y	NA	NA	NA	NA	NA	NA	UIMC1	85806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	176526460	176526848	176526554	Y	FGFR4,FGFR4	FGFR4	NA	NA	NA	NA	FGFR4	14573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr5	176782864	176783054	176782988	Y	NA	MXD3,LMAN2,RGS14,GRK6	NA	NA	NA	NA	RGS14	26	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr5	176790168	176790403	176790363	Y	DOK3,RGS14	LMAN2,RGS14,GRK6,F12	NA	NA	NA	NA	RGS14	7330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr5	176808266	176808459	176808400	Y	PRR7,DBN1,PRELID1	LMAN2,RGS14,GRK6,F12	NA	NA	NA	NA	GRK6	19746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	176855088	176855271	176855220	Y	UIMC1,UIMC1,UIMC1,NSD1,NSD1,RAB24,RGS14,FAM193B,GRK6,PRR7,DOK3,DOK3	GRK6,F12,PRR7,PRR7-AS1,DBN1	NA	NA	NA	NA	PRR7	16175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	176856256	176856655	176856453	Y	UIMC1,UIMC1,UIMC1,NSD1,NSD1,RAB24,RGS14,FAM193B,GRK6,PRR7,DOK3,DOK3	GRK6,F12,PRR7,PRR7-AS1,DBN1	NA	NA	NA	NA	PRR7	14791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	176972522	176972758	176972729	Y	NSD1,RAB24,GRK6,DOK3,DOK3	PDLIM7,DDX41,FAM193B,TMED9	NA	NA	NA	NA	FAM193B	6784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	176973275	176973657	176973542	Y	NSD1,RAB24,GRK6,DOK3,DOK3	DDX41,FAM193B,TMED9	NA	NA	NA	NA	FAM193B	5885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr5	177645267	177645446	177645363	Y	N4BP3,CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	15759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	177647239	177647603	177647383	Y	CLK4,AGXT2L2	HNRNPAB	NA	NA	NA	NA	HNRNPAB	17731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	178052813	178053238	178053128	Y	AGXT2L2,CLK4	CLK4	COL23A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CLK4	2378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr5	178206075	178206216	178206134	Y	NA	NA	NA	NA	NA	NA	ZNF354A	50372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	178259703	178260206	178260005	Y	ZNF879	ZNF354B,RNU1-39P	ZNF879,AGXT2L2,GRM6,COL23A1	IMR90	Hi-C	24141950	ZNF354B	24748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr5	178692524	178692976	178692825	Y	ADAMTS2	NA	NA	NA	NA	NA	ZNF879	243771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr5	178985972	178986151	178986083	Y	NA	RUFY1	NA	NA	NA	NA	RUFY1	10413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr5	179038504	179038699	179038602	Y	NA	HNRNPH1	NA	NA	NA	NA	HNRNPH1	21086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr5	179159137	179159324	179159233	Y	RNF130,RUFY1,SQSTM1,HNRNPH1,MAML1	MAML1	NA	NA	NA	NA	MAML1	1286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	179465387	179465429	179465409	Y	MAML1,MGAT4B,RNF130	RNF130	NA	NA	NA	NA	RNF130	31689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr5	179718006	179718384	179718320	Y	NA	MAPK9	NA	NA	NA	NA	CTB-129O4.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr5	180541875	180541994	180541989	Y	OR2Y1	NA	BTNL8,MGAT1	IMR90	Hi-C	24141950	CTC-338M12.5	74930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr5	180611137	180611357	180611292	Y	MGAT1	CTC-338M12.5,TRIM41,MIR4638	NA	NA	NA	NA	CTC-338M12.5	5567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr5	180634441	180634803	180634658	Y	NA	CTC-338M12.5,TRIM41,MIR4638,SNORD96A,CTC-338M12.4,GNB2L1	NA	NA	NA	NA	TRIM41	12696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	219974	220134	220068	Y	IRF4,DUSP22	NA	EXOC2,DUSP22,IRF4	IMR90	Hi-C	24141950	DUSP22	69496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr6	232942	233376	233125	Y	DUSP22	NA	DUSP22,IRF4	IMR90	Hi-C	24141950	DUSP22	56254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	235986	236322	236025	Y	NA	NA	DUSP22,IRF4,EXOC2	IMR90	Hi-C	24141950	DUSP22	53308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	297557	297773	297630	Y	DUSP22	DUSP22	NA	NA	NA	NA	DUSP22	7927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	320653	321052	320689	Y	NA	DUSP22	NA	NA	NA	NA	DUSP22	31023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	422827	423098	422962	Y	DUSP22,IRF4	NA	NA	NA	NA	NA	DUSP22	133197	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	472688	472701	472695	Y	HUS1B,EXOC2	NA	NA	NA	NA	NA	DUSP22	183058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	541825	541828	541827	Y	NA	NA	NA	NA	NA	NA	EXOC2	149289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	542839	543066	543064	Y	NA	NA	NA	NA	NA	NA	EXOC2	148051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	567084	567274	567179	Y	NA	NA	NA	NA	NA	NA	EXOC2	123843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	1055850	1056126	1055989	Y	FOXQ1	NA	NA	NA	NA	NA	FOXQ1	254549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.408411551282948
chr6	1131986	1132306	1132130	Y	NA	NA	LOC285768	IMR90	Hi-C	24141950	FOXQ1	178369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	1311143	1311466	1311342	Y	NA	FOXQ1	NA	NA	NA	NA	FOXQ1	468	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.90809302916475
chr6	1311552	1311897	1311757	Y	NA	FOXQ1	NA	NA	NA	NA	FOXQ1	877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.649678141211944
chr6	1335859	1336005	1335918	Y	NA	FOXQ1	LOC285768	IMR90	Hi-C	24141950	FOXQ1	25184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	1609094	1609758	1609395	Y	FOXC1	FOXC1	NA	NA	NA	NA	FOXC1	413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	1702305	1702315	1702310	Y	NA	NA	NA	NA	NA	NA	FOXC1	93624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	1869270	1869328	1869296	Y	NA	NA	NA	NA	NA	NA	FOXC1	260589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	1953013	1953362	1953197	Y	NA	NA	NA	NA	NA	NA	GMDS	290564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	1966604	1966616	1966610	Y	NA	NA	NA	NA	NA	NA	GMDS	277310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2007495	2007675	2007591	Y	NA	NA	NA	NA	NA	NA	GMDS	236251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2038182	2038509	2038345	Y	NA	NA	NA	NA	NA	NA	GMDS	205417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2081468	2081822	2081645	Y	NA	NA	NA	NA	NA	NA	GMDS	162104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2227886	2228034	2227944	Y	NA	GMDS,GMDS-AS1	NA	NA	NA	NA	GMDS	15892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	2299603	2299973	2299788	Y	NA	NA	NA	NA	NA	NA	GMDS-AS1	55621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	2330490	2330806	2330587	Y	NA	NA	NA	NA	NA	NA	GMDS-AS1	86508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	2660154	2660406	2660325	Y	SERPINB9,SERPINB1	C6orf195	NA	NA	NA	NA	C6orf195	27317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	2763251	2763536	2763387	Y	NA	WRNIP1	NA	NA	NA	NA	WRNIP1	112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	2767771	2767941	2767856	Y	NA	WRNIP1	NA	NA	NA	NA	WRNIP1	4123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2818084	2818421	2818253	Y	SERPINB9	SERPINB1	NA	NA	NA	NA	SERPINB1	21819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	2877769	2878087	2877933	Y	SERPINB9,NQO2,SERPINB1	SERPINB1,SERPINB9	NA	NA	NA	NA	SERPINB9	23427	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	2921060	2921305	2921156	Y	NA	SERPINB9,SERPINB6	SERPINB9,SERPINB6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SERPINB9	19546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	2992078	2992424	2992251	Y	NA	SERPINB6,NQO2,HTATSF1P2	NA	NA	NA	NA	NQO2	5857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	3052992	3053074	3053033	Y	NA	HTATSF1P2,RIPK1	MYLK4,WRNIP1,DKFZP686I15217,NQO2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RIPK1	9151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	3069574	3070273	3069674	Y	NA	HTATSF1P2,RIPK1,BPHL	LOC100507194,WRNIP1	K562	ChIA-PET	22265404	RIPK1	7349	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	3072108	3072295	3072201	Y	NA	RIPK1,BPHL	NA	NA	NA	NA	RIPK1	9883	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	3163246	3163428	3163368	Y	NA	BPHL,TUBB2A	NA	NA	NA	NA	TUBB2A	7486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr6	3166310	3166878	3166542	Y	NA	BPHL,TUBB2A	NA	NA	NA	NA	TUBB2A	10550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	3209395	3209963	3209634	Y	SERPINB9	PSMG4,TUBB2B	NA	NA	NA	NA	PSMG4	19674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	3238745	3238826	3238788	Y	NA	PSMG4,TUBB2B	NA	NA	NA	NA	TUBB2B	8781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	3248062	3248427	3248198	Y	SLC22A23,TUBB2A,TUBB2B	PSMG4,TUBB2B	TUBB2A,BPHL,RIPK1,LOC100507194,TUBB2B	IMR90	Hi-C	24141950	TUBB2B	18098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	3254273	3254642	3254472	Y	SLC22A23	PSMG4,TUBB2B	NA	NA	NA	NA	TUBB2B	24309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	3259939	3260435	3260206	Y	NA	PSMG4,TUBB2B	NA	NA	NA	NA	TUBB2B	29975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.319662042818924
chr6	3317564	3317616	3317590	Y	NA	NA	NA	NA	NA	NA	TUBB2B	87600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr6	3356099	3356749	3356628	Y	NA	NA	NA	NA	NA	NA	SLC22A23	98507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.400194919473493
chr6	3386855	3386871	3386861	Y	TUBB2A,TUBB2B,SLC22A23	NA	NA	NA	NA	NA	SLC22A23	68385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	3403581	3403822	3403689	Y	BPHL,SLC22A23	NA	NA	NA	NA	NA	SLC22A23	51434	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.14897611311636
chr6	3409066	3409300	3409183	Y	TUBB2B	SLC22A23	NA	NA	NA	NA	SLC22A23	45956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	3511713	3512018	3511866	Y	NA	NA	PXDC1,SLC22A23	IMR90	Hi-C	24141950	SLC22A23	56457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	3789456	3789809	3789635	Y	NA	PXDC1	SLC22A23,PXDC1,FAM50B	IMR90	Hi-C	24141950	PXDC1	39196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.317856659088993
chr6	3797931	3798162	3798051	Y	NA	PXDC1	SLC22A23,FAM50B,TUBB2B,RIPK1,BPHL	IMR90	Hi-C	24141950	PXDC1	47671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.244717771251295
chr6	3913172	3913519	3913429	Y	NA	NA	SLC22A23,FAM50B	IMR90	Hi-C	24141950	PRPF4B	105982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.189989473052387
chr6	3987035	3987350	3987158	Y	NA	PRPF4B	SLC22A23,FAM50B,PXDC1,TUBB2B,BPHL,LOC100507194	IMR90	Hi-C	24141950	PRPF4B	32151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	4613428	4613746	4613742	Y	NA	NA	CDYL,RPP40	IMR90	Hi-C	24141950	CDYL	90647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	4778036	4778769	4778420	Y	CDYL	NA	NA	NA	NA	NA	CDYL	73643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	4990656	4990905	4990781	Y	NA	RPP40	NA	NA	NA	NA	RPP40	11392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	5031190	5031205	5031197	Y	NA	RPP40	RPP40	MCF7	ChIA-PET	22265404	RPP40	28893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	5157743	5158129	5157936	Y	NA	NA	NA	NA	NA	NA	LYRM4	101043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	5179288	5179492	5179391	Y	NA	NA	NA	NA	NA	NA	LYRM4	79680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr6	5246431	5246752	5246693	Y	NA	LYRM4,FARS2	NA	NA	NA	NA	LYRM4	12420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	5296297	5296648	5296345	Y	NA	LYRM4,FARS2	NA	NA	NA	NA	FARS2	37020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	5671479	5671687	5671530	Y	NA	NA	NA	NA	NA	NA	FARS2	412202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	5966118	5966226	5966172	Y	NA	NA	NA	NA	NA	NA	FARS2	706841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	6687140	6687567	6687361	Y	NA	NA	RREB1,SSR1,SNRNP48	IMR90	Hi-C	24141950	RREB1	418263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr6	6750084	6750462	6750414	Y	LY86,RREB1,RREB1	NA	RREB1,SSR1	IMR90	Hi-C	24141950	RREB1	355368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	6970116	6970321	6970219	Y	NA	NA	LY86	IMR90	Hi-C	24141950	RREB1	135509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	7043208	7043422	7043355	Y	NA	NA	RREB1	IMR90	Hi-C	24141950	RREB1	62408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr6	7112981	7113125	7113000	Y	RIOK1,CAGE1,RREB1,RREB1	RREB1	NA	NA	NA	NA	RREB1	7151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	7130548	7130794	7130662	Y	RREB1,RREB1	RREB1	NA	NA	NA	NA	RREB1	24718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	7143191	7143555	7143322	Y	NA	RREB1	NA	NA	NA	NA	RREB1	37361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	7157997	7158379	7158000	Y	NA	NA	NA	NA	NA	NA	RREB1	52167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr6	7174134	7174405	7174138	Y	NA	NA	NA	NA	NA	NA	RREB1	68304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	7261407	7261720	7261663	Y	NA	NA	NA	NA	NA	NA	RP11-69L16.5	76081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.396412209723683
chr6	7544425	7544740	7544519	Y	NA	DSP,SNRNP48	NA	NA	NA	NA	DSP	4617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr6	7591248	7591486	7591394	Y	NA	SNRNP48	NA	NA	NA	NA	SNRNP48	2816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	7701709	7702095	7701966	Y	NA	NA	MUTED-TXNDC5,PIP5K1P1,EEF1E1-MUTED	IMR90	Hi-C	24141950	SNRNP48	113277	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	7996922	7997003	7996963	Y	BMP6,TXNDC5,TXNDC5	TXNDC5	NA	NA	NA	NA	TXNDC5	27643	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	8083649	8083837	8083720	Y	NA	EEF1E1	NA	NA	NA	NA	EEF1E1	16974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	9037386	9037741	9037564	Y	NA	NA	NA	NA	NA	NA	HULC	387016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	10441526	10441791	10441655	Y	TMEM14C,TMEM14B,PAK1IP1,GCNT2,TFAP2A,TFAP2A,TFAP2A	GCNT2	NA	NA	NA	NA	GCNT2	48665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	10719904	10720278	10720060	Y	NA	PAK1IP1,C6orf52,TMEM14C,TMEM14B,SYCP2L	NA	NA	NA	NA	TMEM14C	870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.259345651140275
chr6	10771427	10771996	10771700	Y	ELOVL2,MAK	TMEM14B,SYCP2L	NA	NA	NA	NA	SYCP2L	25400	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	10825104	10825395	10825250	Y	ELOVL2	MAK	NA	NA	NA	NA	MAK	11369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	11144047	11144288	11144135	Y	TMEM170B,C6orf52,NEDD9,NEDD9	NA	NA	NA	NA	NA	ELOVL2	101500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	11170049	11170298	11170253	Y	NA	NA	NA	NA	NA	NA	ELOVL2	127502	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	11197003	11197299	11197017	Y	ERVFRD-1,NEDD9	NA	NA	NA	NA	NA	ELOVL2	154456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	11210069	11210603	11210460	Y	NA	NA	NA	NA	NA	NA	ELOVL2	167522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr6	11212824	11213214	11213068	Y	TMEM170B,NEDD9,NEDD9	NA	NA	NA	NA	NA	NEDD9	167367	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	11217429	11217753	11217578	Y	MAK,NEDD9	NA	NA	NA	NA	NA	NEDD9	162828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	11229489	11229708	11229675	Y	TMEM170B,MAK,ELOVL2,NEDD9,NEDD9	NA	NA	NA	NA	NA	NEDD9	150873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.438981068618564
chr6	11236748	11236970	11236788	Y	TMEM170B,MAK,NEDD9,NEDD9	NA	NA	NA	NA	NA	NEDD9	143611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	11243333	11243432	11243383	Y	MAK,NEDD9	NA	NA	NA	NA	NA	NEDD9	137149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	11299498	11299626	11299552	Y	TMEM170B,MAK,ELOVL2,NEDD9	NA	NA	NA	NA	NA	NEDD9	80955	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.37939702129898
chr6	11318376	11319012	11318732	Y	TMEM170B,MAK,LOC221710,NEDD9,NEDD9	NA	NA	NA	NA	NA	NEDD9	61569	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.252442776888477
chr6	11344526	11344935	11344784	Y	TMEM170B,NEDD9	NEDD9	NA	NA	NA	NA	NEDD9	35646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	11365255	11365579	11365551	Y	NA	NEDD9	NA	NA	NA	NA	NEDD9	15002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	11374452	11374883	11374763	Y	TMEM170B,NEDD9,NEDD9	NEDD9	NA	NA	NA	NA	NEDD9	5698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	11393241	11393536	11393390	Y	NEDD9	NEDD9	NEDD9	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NEDD9	12660	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.65188485248063
chr6	11399331	11399472	11399402	Y	ELOVL2	NEDD9	NEDD9	IMR90	Hi-C	24141950	NEDD9	18750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.738758666496279
chr6	11414898	11415336	11414989	Y	TMEM170B,NEDD9	NEDD9	NEDD9,C6orf228	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NEDD9	34317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	11428073	11428442	11428380	Y	NA	NEDD9	NEDD9,C6orf228,SYCP2L,ELOVL2,ERVFRD-1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	NEDD9	47492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr6	11750046	11750450	11750402	Y	NA	NA	NA	NA	NA	NA	TMEM170B	214108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	12002035	12002174	12002098	Y	NA	HIVEP1	EDN1,ADTRP,HIVEP1	IMR90	Hi-C	24141950	HIVEP1	4821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	12049856	12050263	12050082	Y	EDN1,HIVEP1	HIVEP1	NA	NA	NA	NA	HIVEP1	42861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	12208445	12208821	12208625	Y	HIVEP1,EDN1	NA	HIVEP1	IMR90	Hi-C	24141950	EDN1	79775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	12324386	12324755	12324542	Y	NA	EDN1	EDN1	MCF7	ChIA-PET	22265404	EDN1	35790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	12332214	12332482	12332362	Y	NA	EDN1	EDN1,TMEM170B	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	EDN1	43618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	12371691	12372070	12371982	Y	NA	NA	NA	NA	NA	NA	EDN1	83095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	13096654	13096703	13096662	Y	NA	NA	NA	NA	NA	NA	RNU1-11P	115585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	13383914	13384048	13383981	Y	TBC1D7,GFOD1,GFOD1,GFOD1	NA	NA	NA	NA	NA	TBC1D7	57099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	13602068	13602103	13602086	Y	NA	SIRT5,NOL7	NA	NA	NA	NA	NOL7	11456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	13630387	13630831	13630754	Y	NA	NOL7	NA	NA	NA	NA	NOL7	16828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	13636617	13636971	13636795	Y	TBC1D7,GFOD1,CD83	NOL7	NA	NA	NA	NA	NOL7	23058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	13649579	13649948	13649702	Y	NA	NOL7	NA	NA	NA	NA	NOL7	36020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	13651430	13651585	13651505	Y	NA	NOL7	NA	NA	NA	NA	NOL7	37871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	13671877	13672171	13672102	Y	TBC1D7,GFOD1,GFOD1,CD83	RANBP9	NOL7,SIRT5	K562	ChIA-PET	22265404	RANBP9	37625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	13709903	13710182	13710119	Y	TBC1D7,CD83,RANBP9	RANBP9	SIRT5,NOL7	K562	ChIA-PET	22265404	RANBP9	107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	13712805	13713056	13713043	Y	NA	RANBP9	NA	NA	NA	NA	RANBP9	3009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	13811144	13811203	13811174	Y	RNF182,RNF182	NA	NA	NA	NA	NA	RANBP9	101348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	14211061	14211714	14211398	Y	CD83	NA	JARID2,DTNBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CD83	95189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr6	14211875	14212265	14212161	Y	CD83	NA	JARID2,DTNBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CD83	96003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	14725890	14726226	14726089	Y	NA	NA	DTNBP1,JARID2	IMR90	Hi-C	24141950	JARID2	518301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	15066743	15067555	15067031	Y	NA	NA	JARID2,DTNBP1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	JARID2	176972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	15313668	15313748	15313709	Y	DTNBP1,JARID2	NA	NA	NA	NA	NA	JARID2-AS1	66803	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	15372060	15372197	15372129	Y	NA	NA	NA	NA	NA	NA	JARID2-AS1	125195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	15516223	15516554	15516389	Y	DTNBP1	NA	NA	NA	NA	NA	DTNBP1	144735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	15526544	15526623	15526553	Y	NA	NA	NA	NA	NA	NA	DTNBP1	134666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr6	15569583	15569742	15569685	Y	DTNBP1	NA	NA	NA	NA	NA	DTNBP1	91547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	15616123	15616332	15616207	Y	JARID2	DTNBP1	NA	NA	NA	NA	DTNBP1	44957	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	16001247	16001264	16001256	Y	NA	NA	MYLIP	K562	ChIA-PET	22265404	MYLIP	126092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	16413735	16414124	16414005	Y	MYLIP,ATXN1	NA	NA	NA	NA	NA	MYLIP	286379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	16422379	16422759	16422608	Y	NA	NA	NA	NA	NA	NA	MYLIP	295023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	16439523	16439703	16439580	Y	MYLIP,ATXN1	NA	NA	NA	NA	NA	MYLIP	312167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	16481928	16482422	16482245	Y	NA	NA	NA	NA	NA	NA	RP1-151F17.1	276947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	16607418	16607798	16607611	Y	NA	NA	NA	NA	NA	NA	RP1-151F17.1	151571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	16669504	16669854	16669679	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	89515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	16684094	16684384	16684208	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	74985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	16684658	16685097	16684682	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	74272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	16699529	16700051	16699938	Y	ATXN1	NA	NA	NA	NA	NA	RP1-151F17.1	59318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	16729304	16729629	16729584	Y	NA	RP1-151F17.1,ATXN1	NA	NA	NA	NA	RP1-151F17.1	29740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr6	16741302	16741617	16741570	Y	NA	RP1-151F17.1,ATXN1	NA	NA	NA	NA	RP1-151F17.1	17752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	16771345	16771373	16771363	Y	NA	RP1-151F17.1,ATXN1	ATXN1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	ATXN1	11623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr6	16803732	16803856	16803794	Y	NA	RP1-151F17.1,ATXN1	FLJ23152,GMPR,ATXN1	IMR90	Hi-C	24141950	ATXN1	44010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	17280388	17280785	17280395	Y	CAP2,RBM24,RBM24,RBM24	NA	NA	NA	NA	NA	CAP2	110662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	17312081	17312238	17312192	Y	RBM24	NA	NA	NA	NA	NA	CAP2	79209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.508337246706453
chr6	17430018	17430227	17430123	Y	NA	CAP2	NA	NA	NA	NA	CAP2	38571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	17473157	17473283	17473220	Y	NA	NA	NA	NA	NA	NA	RPL7P26	56600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	17614611	17614952	17614695	Y	KIF13A,NUP153,FAM8A1	FAM8A1	NA	NA	NA	NA	FAM8A1	16025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	17703484	17703614	17703560	Y	KDM1B,FAM8A1,NUP153	NUP153	NA	NA	NA	NA	NUP153	1042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	17729455	17729796	17729624	Y	NA	NUP153	NUP153	K562	ChIA-PET	22265404	NUP153	24799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	17925685	17925969	17925835	Y	NA	NA	NA	NA	NA	NA	KIF13A	59885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	17932767	17932988	17932837	Y	RNF144B,KDM1B	NA	NA	NA	NA	NA	KIF13A	52866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	18020711	18021071	18020890	Y	NA	KIF13A	KIF13A,NHLRC1,TPMT	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KIF13A	34857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr6	18150871	18151234	18151053	Y	NUP153,KDM1B	NHLRC1,TPMT,KDM1B	NA	NA	NA	NA	TPMT	2071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	18445456	18445774	18445699	Y	NA	NA	NA	NA	NA	NA	RNF144B	78677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	18585399	18585722	18585618	Y	NA	NA	NA	NA	NA	NA	RNF144B	218620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	20239709	20240042	20239874	Y	E2F3	MBOAT1	MBOAT1	IMR90	Hi-C	24141950	MBOAT1	29039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	20404913	20405227	20404970	Y	MBOAT1	E2F3	NA	NA	NA	NA	E2F3	4515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr6	20418274	20418752	20418425	Y	NA	E2F3	NA	NA	NA	NA	E2F3	17876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	20604004	20604027	20604016	Y	NA	NA	NA	NA	NA	NA	CDKAL1	71316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	20642705	20642902	20642804	Y	NA	NA	NA	NA	NA	NA	CDKAL1	110017	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	20877706	20877968	20877723	Y	CDKAL1	NA	NA	NA	NA	NA	CDKAL1	345018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	21022706	21023638	21022736	Y	NA	NA	NA	NA	NA	NA	CDKAL1	490018	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr6	21098770	21098791	21098780	Y	NA	NA	NA	NA	NA	NA	SOX4	493181	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr6	21129910	21130117	21129994	Y	NA	NA	NA	NA	NA	NA	SOX4	461855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	21587723	21589288	21589205	Y	SOX4	SOX4	LINC00340,CDKAL1	MCF7	ChIA-PET	22265404	SOX4	2684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr6	21589338	21589711	21589681	Y	SOX4	SOX4	LINC00340,CDKAL1	MCF7	ChIA-PET	22265404	SOX4	2261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	24228927	24229160	24229097	Y	NA	NA	NA	NA	NA	NA	NRSN1	104577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	24310560	24310668	24310614	Y	NA	DCDC2	NA	NA	NA	NA	DCDC2	45612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	24313904	24313964	24313914	Y	DCDC2,KAAG1,DCDC2	DCDC2	NA	NA	NA	NA	DCDC2	42316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	24323980	24324360	24324286	Y	DCDC2,KAAG1,DCDC2	DCDC2	NA	NA	NA	NA	DCDC2	31920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr6	24341517	24341649	24341583	Y	DCDC2,KAAG1,DCDC2	DCDC2	NA	NA	NA	NA	DCDC2	14631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	24348668	24348920	24348794	Y	DCDC2,KAAG1,DCDC2	DCDC2	NA	NA	NA	NA	DCDC2	7360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	24498598	24498722	24498660	Y	NA	ALDH5A1,GPLD1	NA	NA	NA	NA	GPLD1	5165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	24514097	24514400	24514249	Y	NA	ALDH5A1,GPLD1	NA	NA	NA	NA	GPLD1	20664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	24659946	24660207	24660006	Y	TDP2,C6orf62	TDP2,ACOT13	NA	NA	NA	NA	TDP2	5054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	24686171	24686408	24686290	Y	DCDC2	TDP2,ACOT13,C6orf62	NA	NA	NA	NA	ACOT13	20908	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	25815535	25815661	25815655	Y	SLC17A3,SLC17A1	SLC17A1	NA	NA	NA	NA	SLC17A1	14626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	25836224	25836451	25836337	Y	NA	SLC17A1	NA	NA	NA	NA	SLC17A1	5937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.48384744902285
chr6	25992254	25993073	25992840	Y	NA	TRIM38,HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2	NA	NA	NA	NA	HIST1H1A	22967	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.76798476016769
chr6	26006011	26006046	26006038	Y	HIST1H4G,HIST1H2AA,HIST1H2BA,HIST1H1T	TRIM38,HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H1A	9994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	26006419	26006453	26006436	Y	NA	TRIM38,HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H1A	9587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	26026306	26026795	26026679	Y	HIST1H1D,BTN3A3,BTN3A2,BTN3A2,BTN3A1,HIST1H2BD,HIST1H1E,TRIM38,HIST1H3A	HIST1H1A,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H3B,HIST1H2AB,HIST1H2BB,U91328.2,HIST1H3C,HIST1H1C	NA	NA	NA	NA	HIST1H4B	826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	26126352	26126787	26126533	Y	HIST1H4H,HIST1H4F,HIST1H3F,HIST1H2BH,HIST1H2AE,HIST1H3A,HIST1H4A,HIST1H4B,HIST1H2AB,HIST1H3C,HIST1H1C,HIST1H2AC,HIST1H4E,HIST1H1E	HFE,HIST1H4C,HIST1H1T,HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD	NA	NA	NA	NA	HIST1H2AC	3979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.741387204825994
chr6	26322637	26323123	26322876	Y	NA	HIST1H4H,BTN3A2	HIST1H1D,HIST1H4F,ABT1,HIST1H4G,HMGN4,HIST1H3F,HIST1H2BH,HIST1H2BI,HIST1H3G,HCG11,HIST1H4I,HIST1H2BK	IMR90	Hi-C	24141950	HIST1H4H	38875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	26332123	26332243	26332193	Y	NA	HIST1H4H,BTN3A2,BTN2A2	HIST1H1D,HIST1H4F,ABT1,HMGN4,HIST1H4I,HIST1H2BK,HIST1H2AE,HIST1H2BG,BTN2A3P,HIST1H2AG,HIST1H2BJ,BTN2A2,HIST1H2AH,MIR3143,LOC285819,BTN2A1,HCG11,HIST1H3F,HIST1H4D,HIST1H4E,HIST1H2BH,HIST1H3E,HIST1H3D,HIST1H4G,HIST1H2BF,HIST1H3G,HIST1H2BI,HIST1H4H,BTN3A2,BTN3A1,BTN3A3,BTN1A1,HIST1H2BN,HIST1H2AK,HIST1H2AI,HIST1H2BL,HIST1H3H,HIST1H2AJ,HIST1H4J,HIST1H2BM,HIST1H4K,HIST1H2BO,HIST1H3J,HIST1H4L,HIST1H2AM,HIST1H3I	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	BTN3A2	31144	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	26474010	26474599	26474187	Y	NA	BTN3A3,BTN2A1,HCG11	NA	NA	NA	NA	BTN2A1	17860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr6	26521003	26521206	26521108	Y	HIST1H2BC,HIST1H2AC,HIST1H1E,HIST1H2BD,HIST1H1D,BTN3A2,BTN3A2,BTN2A2,BTN2A2,BTN2A2,BTN3A1,BTN3A3,BTN2A1,BTN2A1,ABT1	HCG11,HMGN4	NA	NA	NA	NA	HCG11	927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.450157767185245
chr6	26537641	26538043	26537718	Y	NA	HCG11,HMGN4	NA	NA	NA	NA	HMGN4	1008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	26550694	26551000	26550826	Y	NA	HCG11,HMGN4,ABT1	NA	NA	NA	NA	HMGN4	14061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.376527764782474
chr6	27145729	27146130	27146023	Y	ZNF184	HIST1H2BJ,HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2AH,RP11-209A2.1	HIST1H2AG,HIST1H4I,HIST1H2BK,HIST1H2BJ,MIR3143,HIST1H2AH,ZNF184,LOC100131289,HIST1H2AJ,HIST1H4J,HIST1H3H,HIST1H2BM,HIST1H2AI,HIST1H2BL,HIST1H3I,HIST1H4L,HIST1H1B,HIST1H2AL,HIST1H2AM,HIST1H2BO,OR2B2,LOC100507173	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-209A2.1	30893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr6	27205361	27205470	27205416	Y	NA	RP11-209A2.1	OR2B2,LOC100131289,ZNF184	IMR90	Hi-C	24141950	RP11-209A2.1	28338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	27261332	27261668	27261500	Y	FKSG83	NA	NA	NA	NA	NA	ZNF204P	75636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	27300679	27301026	27300902	Y	NA	ZNF204P,ZNF391	NA	NA	NA	NA	ZNF204P	36278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr6	27375308	27375650	27375484	Y	NA	ZNF204P,ZNF391	NA	NA	NA	NA	ZNF391	34914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	27416333	27416557	27416445	Y	NA	ZNF184	NA	NA	NA	NA	ZNF184	22340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	27446506	27447382	27447356	Y	NA	ZNF184	ZNF184,HIST1H2AG,MIR3143,HIST1H4I,HIST1H2BK,HIST1H2BJ,HIST1H2AH,PRSS16,LOC100131289,HIST1H2BN,HIST1H2AK,HIST1H4J,HIST1H4K,HIST1H2AL,HIST1H1B,HIST1H3I,OR2B2,HIST1H3J,HIST1H2BO,HIST1H2AM	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ZNF184	7609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	27513313	27513537	27513433	Y	NA	NA	HIST1H2AH,HIST1H2BK,MIR3143,HIST1H2AM,HIST1H3J,HIST1H2BO	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF184	74416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.194754923539543
chr6	27585757	27586130	27585944	Y	NA	NA	NA	NA	NA	NA	ZNF184	146860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	27640311	27640352	27640335	Y	NA	NA	ZNF391,PRSS16	IMR90	Hi-C	24141950	HIST1H2BL	133357	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	27655687	27656083	27655918	Y	NA	NA	LOC100507173	MCF7,K562	ChIA-PET	22265404	HIST1H2BL	117626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.180127043650563
chr6	27686942	27687278	27687069	Y	NA	NA	NA	NA	NA	NA	HIST1H2BL	86431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	27745629	27745723	27745700	Y	NA	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J	NA	NA	NA	NA	HIST1H2BL	27986	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	27759985	27760333	27760032	Y	ZNF391,ZNF184,ZNF193,ZNF192,PGBD1,HIST1H2BN,HIST1H2AM,HIST1H3H	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN	NA	NA	NA	NA	HIST1H2BL	13376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.812880295071323
chr6	27798416	27798741	27798578	Y	NA	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L	NA	NA	NA	NA	HIST1H4K	1111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	27807310	27807672	27807617	Y	ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H4L,HIST1H3J,HIST1H3I,HIST1H2BO,HIST1H2AM,HIST1H2AL,HIST1H1B	HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L	NA	NA	NA	NA	HIST1H2BN	2987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr6	27862895	27863061	27863012	Y	ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,ZKSCAN4,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	NA	NA	NA	NA	HIST1H2BO	3692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr6	27863298	27863662	27863535	Y	ZKSCAN3,ZNF184,HIST1H2BL,HIST1H2AI,HIST1H3H,HIST1H2AJ,HIST1H2BM,ZNF323,ZNF193,ZNF192,ZKSCAN4,PGBD1,HIST1H4J,HIST1H4K,HIST1H2AK,HIST1H2BN,HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	HIST1H2AL,HIST1H1B,HIST1H3I,HIST1H4L,HIST1H3J,HIST1H2AM,HIST1H2BO	NA	NA	NA	NA	HIST1H2BO	4095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	28072476	28072872	28072543	Y	HIST1H4K,HIST1H2AK,ZNF165,ZSCAN16,ZNF192	ZNF165,ZSCAN16	NA	NA	NA	NA	ZSCAN16	17466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.574242243472042
chr6	28099505	28099599	28099552	Y	OR2B2,OR2B6,ZNF187,ZSCAN16	ZSCAN16,ZNF192P1	NA	NA	NA	NA	ZSCAN16	9167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	28101066	28101269	28101177	Y	OR2B2,ZNF187,ZKSCAN4,ZSCAN16	ZSCAN16,ZNF192P1	NA	NA	NA	NA	ZSCAN16	10728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151202812300115
chr6	28302002	28302386	28302196	Y	NA	ZKSCAN3	NA	NA	NA	NA	ZKSCAN3	13305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	28414953	28415259	28415025	Y	NA	ZSCAN12,ZSCAN23,COX11P1	NA	NA	NA	NA	COX11P1	2203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.180127043650563
chr6	28710805	28711035	28710922	Y	NA	NA	NA	NA	NA	NA	XXbac-BPG308K3.5	93748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	28805076	28805418	28805247	Y	NA	XXbac-BPG308K3.5	NA	NA	NA	NA	XXbac-BPG308K3.5	293	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	28834475	28834586	28834545	Y	NA	XXbac-BPG308K3.5,HCG14	NA	NA	NA	NA	HCG14	27721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr6	28985048	28985267	28985158	Y	NA	HCG15	TRIM27,LOC401242	MCF7,K562	ChIA-PET	22265404	HCG15	33068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	29829189	29829211	29829201	Y	NA	HLA-G,HLA-H,HCG4P7	ZNRD1-AS1,HLA-J,HCG9	IMR90	Hi-C	24141950	HLA-H	24139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	29932777	29932958	29932802	Y	HLA-F,TRIM10,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,HLA-A	HLA-K,HLA-A,HLA-J	NA	NA	NA	NA	HLA-A	25740	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.74031416545513
chr6	29933738	29934144	29933980	Y	NA	HLA-K,HLA-A,HLA-J	NA	NA	NA	NA	HLA-A	26701	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr6	29935319	29935652	29935489	Y	NA	HLA-K,HLA-A,HLA-J	NA	NA	NA	NA	HLA-A	28282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	30010922	30011054	30010960	Y	NA	HLA-J,ZNRD1,ZNRD1-AS1,PPP1R11,RNF39	NA	NA	NA	NA	ZNRD1	13622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	30068638	30068845	30068662	Y	NA	ZNRD1,ZNRD1-AS1,PPP1R11,RNF39	NA	NA	NA	NA	RNF39	26974	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.74448954776661
chr6	30069810	30070038	30069951	Y	HLA-E,ABCF1,HLA-F,LOC554223,HLA-G,TRIM39-RPP21,TRIM39,TRIM39,TRIM26,PPP1R11,RNF39,RNF39	ZNRD1,ZNRD1-AS1,PPP1R11,RNF39	NA	NA	NA	NA	RNF39	28146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.640147240237632
chr6	30175844	30176213	30176153	Y	NA	TRIM15,TRIM26,HLA-L	NA	NA	NA	NA	TRIM26	2991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	30177609	30178061	30177863	Y	NA	TRIM15,TRIM26,HLA-L	NA	NA	NA	NA	TRIM26	1143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	30182160	30182533	30182417	Y	NA	TRIM26,HLA-L	NA	NA	NA	NA	TRIM26	2956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr6	30247447	30247451	30247450	Y	NA	HLA-L,TRIM39,HCG18	NA	NA	NA	NA	HLA-L	22086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	30254050	30254472	30254356	Y	NA	HLA-L,TRIM39,HCG18	NA	NA	NA	NA	HLA-L	28689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206754265098808
chr6	30276337	30276699	30276532	Y	ATAT1,ATAT1	TRIM39,HCG18,RPP21	NA	NA	NA	NA	TRIM39	15557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	30453844	30454132	30453996	Y	ZNRD1,TUBB	RANP1,HLA-E	HLA-E	MCF7,K562	ChIA-PET	22265404	HLA-E	1112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.274796174021838
chr6	30495647	30495976	30495809	Y	PPP1R11,TRIM26,TRIM39,TRIM39,TRIM39-RPP21,PPP1R10,KIAA1949,KIAA1949,IER3,FLOT1,HLA-E	RANP1,HLA-E,PRR3,GNL1,ABCF1	NA	NA	NA	NA	PRR3	26687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	30716597	30717062	30716912	Y	IER3	MDC1,TUBB,FLOT1,IER3,HCG20	PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1	IMR90	Hi-C	24141950	IER3	6266	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.34061087215391
chr6	30717441	30717627	30717503	Y	RPP21,SFTA2,PSORS1C1	MDC1,TUBB,FLOT1,IER3,HCG20	PPP1R18,NRM,IER3,FLOT1,GTF2H4,VARS2,DDR1,DPCR1	IMR90	Hi-C	24141950	IER3	7110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.409725820447805
chr6	30726704	30727354	30727015	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3	MDC1,TUBB,FLOT1,IER3,HCG20	DPCR1,NRM,PPP1R18,MDC1,FLOT1,IER3,C6orf136,DHX16,DDR1,VARS2,SFTA2,CCHCR1,PSORS1C1,PSORS1C2	IMR90	Hi-C	24141950	HCG20	5248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	30731311	30731508	30731442	Y	VARS2,VARS2	MDC1,TUBB,FLOT1,IER3,HCG20	DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A	IMR90	Hi-C	24141950	HCG20	1094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.901629803535349
chr6	30731781	30732171	30732168	Y	NA	MDC1,TUBB,FLOT1,IER3,HCG20	DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A	IMR90	Hi-C	24141950	HCG20	431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.759466266037272
chr6	30736850	30737361	30737156	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,ABCF1,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3	FLOT1,IER3,HCG20	DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HCG20	4248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.501434884061855
chr6	30737456	30737900	30737560	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,ABCF1,PPP1R10,KIAA1949,KIAA1949,FLOT1,IER3	FLOT1,IER3,HCG20	DPCR1,PPP1R18,SFTA2,CCHCR1,PSORS1C1,PSORS1C2,FLOT1,TUBB,IER3,MDC1,GTF2H4,DDR1,VARS2,C6orf15,PRRC2A,MRPS18B,PPP1R10	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	HCG20	4854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.997772789209042
chr6	30755729	30756010	30755821	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PPP1R10,KIAA1949,KIAA1949,HLA-C,FLOT1,IER3	FLOT1,IER3,HCG20	FLOT1,C6orf15,PSORS1C1,DHX16,PPP1R18,TUBB,NRM,IER3,MDC1,DDR1,DPCR1,SFTA2,VARS2,C6orf136,GTF2H4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HCG20	23127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr6	30761567	30761766	30761739	Y	TRIM39,TRIM39,TRIM39-RPP21,HLA-E,PRR3,PPP1R10,KIAA1949,KIAA1949,PBMUCL1,HLA-C,FLOT1,IER3	HCG20	FLOT1,C6orf15,PSORS1C1,DHX16,PPP1R18,TUBB,NRM,MDC1,DDR1,IER3,DPCR1,SFTA2,VARS2,C6orf136,GTF2H4,MUC22,PSORS1C3,TCF19,POU5F1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	HCG20	28965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	30774085	30774428	30774395	Y	NA	HCG20	FLOT1,C6orf15,PSORS1C1,TUBB,DDR1,VARS2,DHX16,SFTA2,PPP1R18,NRM,IER3,MUC22	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	HCG20	41483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	30796195	30796565	30796398	Y	HLA-E,PPP1R10,KIAA1949,KIAA1949,IER3	DDR1	IER3,FLOT1,DDR1,VARS2,GTF2H4,C6orf136,DHX16,C6orf15,PSORS1C1	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	DDR1	45633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr6	30845366	30845734	30845666	Y	PPP1R10,KIAA1949,KIAA1949,IER3	DDR1,GTF2H4,VARS2	NA	NA	NA	NA	DDR1	3168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	31702368	31703528	31702658	Y	HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,SKIV2L,PBX2,NEU1,HSPA1L,HSPA1A,GPSM3,ATF6B,AGPAT1,C6orf47,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1	ABHD16A,LY6G6C,DDAH2,CLIC1,MSH5,VWA7	NA	NA	NA	NA	CLIC1	2012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.433392975138824
chr6	31705604	31706142	31705906	Y	HLA-C,HLA-B,TNF,LST1,LST1,LST1,AIF1,AIF1,STK19,PBX2,NEU1,HSPA1L,HSPA1B,HSPA1A,GPSM3,ATF6B,AGPAT1,GPANK1,LY6G5B,ABHD16A,ABHD16A,C6orf25,CLIC1	ABHD16A,LY6G6C,DDAH2,CLIC1,VWA7	NA	NA	NA	NA	MSH5	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.721993874449858
chr6	31789672	31790268	31789876	Y	NA	VWA7,VARS,LSM2,HSPA1A,HSPA1L,HSPA1B,C6orf48,SNORD52,NEU1	NA	NA	NA	NA	HSPA1B	3244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.92759396812857
chr6	32081652	32082042	32081917	Y	NA	ATF6B,FKBPL,PPT2,PRRT1,EGFL8	NA	NA	NA	NA	ATF6B	11988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	32114130	32114430	32114186	Y	GPANK1,GPANK1,LY6G5C,DOM3Z,FKBPL	ATF6B,FKBPL,PPT2,PRRT1,EGFL8,AGPAT1,RNF5,XXbac-BPG300A18.13,PBX2,GPSM3	NA	NA	NA	NA	PPT2	4788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	32802290	32802518	32802510	Y	NA	TAP2,TAPSAR1,PSMB9,PSMB8,TAP1	NA	NA	NA	NA	TAP2	2039	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	33158336	33158731	33158575	Y	NA	COL11A2,SLC39A7,RXRB,HSD17B8,RING1	NA	NA	NA	NA	COL11A2	60	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	33159164	33159383	33159309	Y	NA	COL11A2,SLC39A7,RXRB,HSD17B8,RING1	NA	NA	NA	NA	COL11A2	888	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	33216178	33216307	33216243	Y	NA	SLC39A7,RXRB,HSD17B8,RING1,HCG25,RPS18,VPS52,PFDN6,WDR46,RGL2	NA	NA	NA	NA	HCG25	867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	33386765	33387072	33386901	Y	HLA-DMB,HLA-DMA,BRD2,HLA-DPA1,HLA-DPB1	KIFC1,PHF1,CUTA,SYNGAP1,ZBTB9	NA	NA	NA	NA	SYNGAP1	918	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	33392796	33393285	33393082	Y	SYNGAP1	KIFC1,PHF1,CUTA,SYNGAP1,ZBTB9	NA	NA	NA	NA	SYNGAP1	6949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	33538911	33539356	33539169	Y	LEMD2,LEMD2,HLA-DPB1,RXRB,RPS18,B3GALT4,TAPBP,PHF1	BAK1,ITPR3	NA	NA	NA	NA	BAK1	6663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	33558672	33558897	33558785	Y	NA	BAK1,ITPR3	NA	NA	NA	NA	BAK1	12653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr6	33581625	33581918	33581825	Y	NA	BAK1,ITPR3	NA	NA	NA	NA	ITPR3	4224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr6	33712309	33712484	33712432	Y	IP6K3	IP6K3,LEMD2	NA	NA	NA	NA	IP6K3	278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.283012805831294
chr6	34191726	34192136	34191830	Y	C6orf1,HMGA1	CYCSP55,HMGA1,C6orf1,RPL35P2	RPS10-NUDT3,NUDT3,C6orf1	MCF7	ChIA-PET	22265404	CYCSP55	6510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.415313913927546
chr6	34358644	34359014	34358829	Y	NA	NUDT3,RPS10	NA	NA	NA	NA	NUDT3	193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr6	34404691	34404878	34404787	Y	ANKS1A	NUDT3,RPS10	NA	NA	NA	NA	RPS10	12789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	34615040	34615205	34615123	Y	NA	C6orf106	NA	NA	NA	NA	C6orf106	47431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	34625381	34625487	34625387	Y	HMGA1	C6orf106	NA	NA	NA	NA	C6orf106	37149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	35017720	35018080	35017831	Y	NA	NA	NA	NA	NA	NA	ANKS1A	162678	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	35279423	35279720	35279457	Y	FKBP5,TAF11,ZNF76,RPL10A,DEF6	DEF6,PPARD	NA	NA	NA	NA	DEF6	15828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr6	35336371	35336758	35336422	Y	NA	PPARD	NA	NA	NA	NA	PPARD	28036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	35337950	35338511	35338285	Y	ZNF76,RPL10A,DEF6,PPARD	PPARD	NA	NA	NA	NA	PPARD	29615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	35453228	35453566	35453395	Y	NA	FANCE,RPL10A,TEAD3	NA	NA	NA	NA	TEAD3	9287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	35457906	35458213	35458053	Y	TEAD3	FANCE,RPL10A,TEAD3	NA	NA	NA	NA	TEAD3	4640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	35569141	35569999	35569809	Y	FKBP5,SLC26A8,SLC26A8,SLC26A8,MAPK14,FKBP5,FKBP5,ZNF76,DEF6	RP3-340B19.2	NA	NA	NA	NA	RP3-340B19.2	47491	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	35622155	35622366	35622317	Y	NA	NA	NA	NA	NA	NA	FKBP5	71994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	35632268	35633036	35633003	Y	NA	NA	NA	NA	NA	NA	FKBP5	61324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	36005886	36006030	36005958	Y	NA	MAPK14	NA	NA	NA	NA	MAPK14	12398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	36010041	36010276	36010159	Y	NA	MAPK14	NA	NA	NA	NA	MAPK14	16553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	36086314	36086741	36086595	Y	SRPK1,SLC26A8,SLC26A8,SLC26A8,MAPK14,STK38,SRSF3,PXT1,KCTD20,BRPF3	MAPK13	NA	NA	NA	NA	MAPK13	6845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	36326450	36326703	36326560	Y	CPNE5	NA	NA	NA	NA	NA	KCTD20	81841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	36391024	36391283	36391227	Y	SRSF3,CDKN1A,CDKN1A,PXT1	KCTD20,PXT1	NA	NA	NA	NA	KCTD20	17261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	36409257	36409482	36409373	Y	MAPK14,BRPF3,STK38,SRSF3,CDKN1A,CDKN1A,ETV7,ETV7,PXT1,KCTD20	KCTD20,PXT1	NA	NA	NA	NA	PXT1	591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr6	36547678	36548077	36547769	Y	PI16,MTCH1	STK38,SRSF3	STK38,SRSF3,KCTD20,PXT1,MIR3925	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	SRSF3	12068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr6	36634782	36635224	36635042	Y	MTCH1,CDKN1A,CDKN1A,CDKN1A,CDKN1A	RNU1-88P,LAP3P2,CDKN1A	CDKN1A,SRSF3,MIR3925,CPNE5,PPIL1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	LAP3P2	4370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.739250292668552
chr6	36802429	36803020	36802653	Y	PI16,CPNE5	C6orf89,PPIL1	NA	NA	NA	NA	C6orf89	34626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	37051169	37051555	37051360	Y	SRSF3,CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FGD2	NA	CPNE5,PIM1,C6orf89,PPIL1,FGD2,TBC1D22B,MTCH1,TMEM217	IMR90	Hi-C	24141950	PIM1	84424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr6	37070053	37070857	37070460	Y	CDKN1A,CDKN1A,TMEM217,TMEM217,TBC1D22B,PIM1,FTSJD2,FGD2	NA	PIM1,PPIL1,TBC1D22B,CPNE5,TMEM217,C6orf89,FGD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	65122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr6	37094186	37094408	37094276	Y	PPIL1	PIM1	PIM1,PPIL1,FGD2,C6orf89,TMEM217,CPNE5,MTCH1,TBC1D22B,CDKN1A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	41571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	37095912	37096089	37096014	Y	NA	PIM1	PIM1,CPNE5,TMEM217,PPIL1,MIR3925,C6orf89,FGD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	39890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.521982385858085
chr6	37098455	37099411	37099295	Y	NA	PIM1	PIM1,CPNE5,TMEM217,PPIL1,MIR3925,C6orf89,FGD2	IMR90	Hi-C	24141950	PIM1	36568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	37104071	37104158	37104105	Y	NA	PIM1	PIM1,CPNE5,TMEM217,PPIL1,MIR3925,C6orf89,FGD2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	31821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr6	37104908	37105418	37105405	Y	NA	PIM1	PIM1,CPNE5,TMEM217,PPIL1,C6orf89,FGD2,TBC1D22B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PIM1	30561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr6	37210217	37210497	37210343	Y	TMEM217,TMEM217	TBC1D22B,TMEM217	NA	NA	NA	NA	TBC1D22B	13051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	37210643	37210874	37210721	Y	TMEM217,TMEM217	TBC1D22B,TMEM217	NA	NA	NA	NA	TBC1D22B	12674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	37212541	37212901	37212835	Y	NA	TBC1D22B,TMEM217	NA	NA	NA	NA	TBC1D22B	10647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.276601557751769
chr6	37227057	37227393	37227190	Y	FTSJD2,TMEM217,TBC1D22B,TMEM217	TBC1D22B,TMEM217	NA	NA	NA	NA	TMEM217	3126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	37269905	37270172	37270040	Y	C6orf89,TBC1D22B	TBC1D22B,TMEM217,RNF8	NA	NA	NA	NA	TMEM217	45974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	37271813	37272101	37271931	Y	PIM1,TBC1D22B	TBC1D22B,TMEM217,RNF8	NA	NA	NA	NA	RNF8	47647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	37366071	37366087	37366081	Y	NA	RNF8	NA	NA	NA	NA	RNF8	46323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	37484293	37484960	37484497	Y	NA	CCDC167	CCDC167,MDGA1,RNF8,FTSJD2,TBC1D22B,MIR4462,ZFAND3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CCDC167	18595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.260168294132859
chr6	37647695	37647837	37647766	Y	NA	NA	NA	NA	NA	NA	ZFAND3	137438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	37752102	37752667	37752552	Y	MDGA1	ZFAND3	BTBD9,ZFAND3,FTSJD2,CCDC167,MDGA1	IMR90	Hi-C	24141950	ZFAND3	32608	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	38122967	38123257	38123161	Y	ZFAND3,BTBD9	NA	NA	NA	NA	NA	ZFAND3	337692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	38605801	38606040	38606032	Y	NA	NA	NA	NA	NA	NA	BTBD9	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	39850347	39850811	39850571	Y	NA	MOCS1	NA	NA	NA	NA	MOCS1	49479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	39886697	39886822	39886760	Y	NA	MOCS1,RP1-278E11.3	NA	NA	NA	NA	MOCS1	13468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	40904550	40904902	40904649	Y	UNC5CL	NA	APOBEC2,C6orf130,TSPO2,UNC5CL	IMR90	Hi-C	24141950	UNC5CL	100026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	40964511	40964818	40964666	Y	NA	UNC5CL	NA	NA	NA	NA	UNC5CL	40110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.323113224141223
chr6	40965087	40965613	40965406	Y	NA	UNC5CL	NA	NA	NA	NA	UNC5CL	39315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	41008417	41008606	41008512	Y	UNC5CL,TSPO2,TSPO2	UNC5CL,NFYA	NA	NA	NA	NA	UNC5CL	3489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.319662042818924
chr6	41153851	41154204	41154120	Y	TREML4,TREM1,NFYA	TREM2	NA	NA	NA	NA	TREM2	24927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	41341728	41341773	41341752	Y	FRS3	NA	NA	NA	NA	NA	TREM1	89271	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	41471691	41471833	41471786	Y	NA	FOXP4,RP11-328M4.2	FOXP4	IMR90	Hi-C	24141950	FOXP4	40331	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.661837580515971
chr6	41472054	41472459	41472263	Y	NA	FOXP4,RP11-328M4.2	FOXP4	IMR90	Hi-C	24141950	FOXP4	39705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr6	41506487	41506686	41506561	Y	NFYA,TREML4,TREM1,TFEB	FOXP4,RP11-328M4.2	NA	NA	NA	NA	FOXP4	5478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	41512989	41513289	41513139	Y	NA	FOXP4,RP11-328M4.2	NA	NA	NA	NA	FOXP4	825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.227952979204874
chr6	41546441	41546593	41546496	Y	FRS3	FOXP4,RP11-328M4.2	NA	NA	NA	NA	RP11-328M4.2	32082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	41612844	41613289	41612975	Y	NA	NA	NA	NA	NA	NA	TFEB	88708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	41675584	41675662	41675651	Y	TREM1,TFEB	TFEB,PGC	NA	NA	NA	NA	TFEB	26335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	41686086	41686432	41686391	Y	NA	TFEB,PGC	NA	NA	NA	NA	TFEB	15565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	41696174	41696539	41696421	Y	TFEB	TFEB,PGC,PRICKLE4	NA	NA	NA	NA	TFEB	5458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	41889955	41890338	41890119	Y	FRS3	USP49,MED20,BYSL	NA	NA	NA	NA	BYSL	3029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20543999593395
chr6	42011738	42011769	42011754	Y	NA	CCND3,TAF8	NA	NA	NA	NA	CCND3	4326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	42204481	42204837	42204659	Y	TRERF1	MRPS10	NA	NA	NA	NA	MRPS10	20878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	42228452	42228568	42228527	Y	NA	MRPS10	NA	NA	NA	NA	MRPS10	44849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.25671711281056
chr6	42255073	42255501	42255249	Y	NA	NA	NA	NA	NA	NA	MRPS10	71470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	42420719	42421067	42420926	Y	NA	NA	NA	NA	NA	NA	UBR2	108733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	42522150	42522385	42522267	Y	GUCA1A,MEA1,KIAA0240	UBR2	GUCA1B,TRERF1,TAF8,C6orf132,UBR2,MRPS10	IMR90	Hi-C	24141950	UBR2	7415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	42628711	42629075	42628795	Y	NA	NA	NA	NA	NA	NA	ATP6V0CP3	63897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	42722931	42723177	42723029	Y	NA	ATP6V0CP3,TBCC	UBR2,KIAA0240,TBCC,PRPH2,RPL7L1,KLHDC3,RRP36,GUCA1A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TBCC	10373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	42898508	42898648	42898552	Y	NA	C6orf226,CNPY3,RPL24P4,GNMT,PEX6	NA	NA	NA	NA	CNPY3	3570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	42944777	42944970	42944923	Y	NA	CNPY3,RPL24P4,GNMT,PPP2R5D,MEA1,KLHDC3,RRP36	NA	NA	NA	NA	PEX6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	43001164	43001472	43001318	Y	NA	MEA1,KLHDC3,RRP36,KLC4,CUL7,MRPL2,PTK7	NA	NA	NA	NA	KLC4	5043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	43058034	43058580	43058415	Y	NA	CUL7,MRPL2,PTK7	NA	NA	NA	NA	PTK7	16028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	43085846	43085863	43085854	Y	NA	PTK7	NA	NA	NA	NA	PTK7	43840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	43242978	43243220	43243076	Y	GNMT,KLC4,SLC22A7,CRIP3	SLC22A7,CRIP3	SLC22A7,CRIP3,ZNF318	IMR90	Hi-C	24141950	SLC22A7	18212	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.30206595280283
chr6	43295599	43295850	43295834	Y	TJAP1	SLC22A7,CRIP3,ZNF318	NA	NA	NA	NA	CRIP3	21064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	43332066	43332081	43332075	Y	NA	ZNF318	NA	NA	NA	NA	ZNF318	3135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	43635973	43636240	43636108	Y	NA	GTPBP2,MAD2L1BP,MRPS18A	NA	NA	NA	NA	MRPS18A	17288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	43692783	43693195	43692965	Y	TJAP1,MAD2L1BP	MRPS18A,VEGFA	MRPS18A,LOC100132354,RSPH9,MRPL14,CAPN11,TMEM63B,POLH,VEGFA,XPO5,MAD2L1BP,GTPBP2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	MRPS18A	39255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr6	43766474	43766976	43766784	Y	NFKBIE,MAD2L1BP	VEGFA	NA	NA	NA	NA	VEGFA	30553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr6	43771690	43772179	43771963	Y	NFKBIE,MAD2L1BP	VEGFA	NA	NA	NA	NA	VEGFA	35769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	43774176	43774478	43774332	Y	NA	VEGFA	NA	NA	NA	NA	VEGFA	38255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.455745860664985
chr6	43878497	43878687	43878563	Y	GTPBP2,MRPS18A	NA	NA	NA	NA	NA	C6orf223	87630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	43894411	43894725	43894584	Y	NFKBIE,TJAP1,GTPBP2,MAD2L1BP	NA	NA	NA	NA	NA	C6orf223	71592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	44002049	44002379	44002368	Y	NFKBIE,GTPBP2	C6orf223,RP5-1120P11.3,RP5-1120P11.1	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	C6orf223	35732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	44010067	44010199	44010133	Y	C6orf223	C6orf223,RP5-1120P11.3,RP5-1120P11.1	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	RP5-1120P11.3	29451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	44011946	44012485	44012109	Y	NA	C6orf223,RP5-1120P11.3,RP5-1120P11.1	RSPH9,LOC100132354,POLH,GTPBP2,XPO5,MRPS18A,VEGFA	IMR90	Hi-C	24141950	RP5-1120P11.3	27165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	44026121	44027353	44026480	Y	NFKBIE,MAD2L1BP	RP5-1120P11.3,RP5-1120P11.1	RSPH9,LOC100132354,POLH,GTPBP2,MRPS18A,MAD2L1BP,VEGFA,C6orf223	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP5-1120P11.3	12297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	44029482	44029781	44029724	Y	NFKBIE,MAD2L1BP	RP5-1120P11.3,RP5-1120P11.1	RSPH9,LOC100132354,POLH,GTPBP2,MAD2L1BP,VEGFA,XPO5,MRPS18A,C6orf223,MRPL14	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP5-1120P11.3	9869	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	44040704	44041103	44040711	Y	C6orf223,NFKBIE	RP5-1120P11.3,RP5-1120P11.1	POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,MRPS18A,HSP90AB1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP5-1120P11.1	315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	44043583	44043857	44043624	Y	SLC35B2	RP5-1120P11.3,RP5-1120P11.1,TMEM63B,MRPL14	POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,HSP90AB1,XPO5,MRPS18A,C6orf223,CAPN11,TMEM63B	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP5-1120P11.1	3194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	44044328	44044673	44044418	Y	C6orf223,NFKBIE	RP5-1120P11.3,RP5-1120P11.1,TMEM63B,MRPL14	POLH,GTPBP2,LOC100132354,RSPH9,MAD2L1BP,VEGFA,HSP90AB1,XPO5,MRPS18A,C6orf223,CAPN11,TMEM63B	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP5-1120P11.1	3939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr6	44070488	44070804	44070651	Y	NA	RP5-1120P11.3,RP5-1120P11.1,TMEM63B,MRPL14	NA	NA	NA	NA	TMEM63B	21847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	44096308	44096658	44096594	Y	NA	TMEM63B,MRPL14	NA	NA	NA	NA	MRPL14	3114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	44190356	44190650	44190419	Y	NA	SLC29A1,HSP90AB1,MIR4647,SLC35B2,NFKBIE	NA	NA	NA	NA	SLC29A1	5114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	44205272	44205504	44205346	Y	NFKBIE	SLC29A1,HSP90AB1,MIR4647,SLC35B2,NFKBIE	NA	NA	NA	NA	HSP90AB1	7320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr6	44230828	44231731	44231363	Y	NFKBIE	SLC29A1,HSP90AB1,MIR4647,SLC35B2,AARS2	NA	NA	NA	NA	NFKBIE	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	44443307	44443732	44443616	Y	NA	NA	NA	NA	NA	NA	CDC5L	90045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	44887030	44887214	44887174	Y	NA	NA	NA	NA	NA	NA	SUPT3H	456476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	44924205	44924374	44924290	Y	NA	NA	NA	NA	NA	NA	SUPT3H	419316	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	44949602	44949944	44949774	Y	NA	NA	NA	NA	NA	NA	SUPT3H	393746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	45051436	45051642	45051539	Y	NA	NA	NA	NA	NA	NA	SUPT3H	292048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	45297606	45298153	45297881	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	45537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	45299468	45299716	45299591	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	43974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	45299904	45300369	45300004	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	43321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	45302184	45302302	45302245	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	41388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr6	45306825	45307168	45307007	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	36522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	45313959	45314320	45314140	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	29370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr6	45317803	45318343	45317888	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	25347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	45319946	45320392	45320176	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	23298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr6	45322073	45322342	45322124	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	21348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	45322429	45322774	45322605	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	20916	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	45326054	45326100	45326076	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	17590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	45330194	45330521	45330358	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	13169	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	45335233	45335541	45335303	Y	NA	SUPT3H	NA	NA	NA	NA	SUPT3H	8149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	47041238	47041252	47041245	Y	NA	NA	TNFRSF21	IMR90	Hi-C	24141950	TNFRSF21	234389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.383430127427072
chr6	47043667	47044082	47043892	Y	NA	NA	TNFRSF21	IMR90	Hi-C	24141950	TNFRSF21	231559	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.546632281286451
chr6	47102503	47102708	47102571	Y	NA	NA	TNFRSF21	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFRSF21	172933	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr6	47214948	47215452	47215060	Y	NA	NA	NA	NA	NA	NA	TNFRSF21	60189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	47220408	47220656	47220576	Y	NA	NA	NA	NA	NA	NA	TNFRSF21	54985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	47263537	47263554	47263549	Y	NA	TNFRSF21	NA	NA	NA	NA	TNFRSF21	12087	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr6	47275760	47275938	47275849	Y	NA	TNFRSF21	NA	NA	NA	NA	TNFRSF21	119	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	48005638	48005954	48005856	Y	NA	NA	NA	NA	NA	NA	CD2AP	562113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	48013349	48013528	48013439	Y	NA	NA	NA	NA	NA	NA	CD2AP	569824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	51275260	51275721	51275608	Y	NA	RP3-437C15.1	NA	NA	NA	NA	RP3-437C15.1	1925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	52217307	52217701	52217502	Y	NA	PAQR8	PAQR8,MCM3,EFHC1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PAQR8	6518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	52241741	52241853	52241800	Y	NA	PAQR8,EFHC1	NA	NA	NA	NA	PAQR8	17522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	52242466	52242866	52242548	Y	NA	PAQR8,EFHC1	NA	NA	NA	NA	PAQR8	18247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr6	52247517	52247853	52247539	Y	NA	PAQR8,EFHC1	NA	NA	NA	NA	PAQR8	23298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	52255288	52255470	52255373	Y	NA	PAQR8,EFHC1	NA	NA	NA	NA	EFHC1	27636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	52261634	52261809	52261784	Y	EFHC1	PAQR8,EFHC1	NA	NA	NA	NA	EFHC1	21297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	52339756	52339820	52339788	Y	NA	NA	NA	NA	NA	NA	EFHC1	56650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	52376478	52376751	52376615	Y	NA	NA	NA	NA	NA	NA	TRAM2	62962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr6	52382425	52382779	52382512	Y	NA	NA	NA	NA	NA	NA	TRAM2	56934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	52383934	52384018	52383972	Y	NA	NA	NA	NA	NA	NA	TRAM2	55695	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	52416960	52417092	52417044	Y	GSTA5,PAQR8	TRAM2	NA	NA	NA	NA	TRAM2	22621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	52431726	52432083	52432005	Y	TRAM2	TRAM2	EFHC1	IMR90	Hi-C	24141950	TRAM2	7630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	52460126	52460529	52460233	Y	TRAM2	TRAM2	EFHC1,TRAM2,MCM3,ICK,LOC730101	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TRAM2	20413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.367487978373235
chr6	52461371	52461586	52461469	Y	NA	TRAM2	EFHC1,TRAM2,MCM3,ICK,LOC730101	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TRAM2	21658	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr6	52463140	52463494	52463299	Y	NA	TRAM2	EFHC1,TRAM2,MCM3,ICK,LOC730101	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TRAM2	23427	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.63266295278725
chr6	52505026	52505217	52505106	Y	NA	TMEM14A	EFHC1,TRAM2,PAQR8,LOC730101	IMR90	Hi-C	24141950	TMEM14A	28690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	52591404	52591712	52591556	Y	NA	GSTA2	NA	NA	NA	NA	GSTA2	34655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	52911792	52912057	52911925	Y	NA	FBXO9,ICK	NA	NA	NA	NA	FBXO9	2732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	52952230	52952503	52952367	Y	NA	FBXO9,ICK	NA	NA	NA	NA	ICK	27630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	53165916	53166137	53165996	Y	NA	ELOVL5	NA	NA	NA	NA	ELOVL5	45810	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	53191249	53191636	53191614	Y	NA	ELOVL5	NA	NA	NA	NA	ELOVL5	20311	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	53199994	53200715	53200310	Y	FBXO9,FBXO9,FBXO9,ELOVL5	ELOVL5	NA	NA	NA	NA	ELOVL5	11232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	53224045	53224723	53224315	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	12098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.876979396499782
chr6	53225010	53225140	53225110	Y	NA	ELOVL5	ELOVL5	K562	ChIA-PET	22265404	ELOVL5	13063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	53376137	53376766	53376496	Y	NA	NA	NA	NA	NA	NA	GCLC	103002	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	53412768	53413364	53413026	Y	GCLC	NA	NA	NA	NA	NA	GCLC	66404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.243403502086438
chr6	53660581	53660848	53660781	Y	LRRC1	LRRC1	NA	NA	NA	NA	LRRC1	3286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	53678166	53678361	53678262	Y	NA	LRRC1	NA	NA	NA	NA	LRRC1	20871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr6	56578288	56578394	56578341	Y	NA	NA	DST	IMR90	Hi-C	24141950	DST	239032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	57004936	57005232	57005084	Y	NA	BAG2	NA	NA	NA	NA	BAG2	29892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	57046105	57046302	57046204	Y	NA	BAG2,RAB23	NA	NA	NA	NA	BAG2	10981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	57052407	57052730	57052411	Y	NA	BAG2,RAB23	NA	NA	NA	NA	BAG2	17283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	57216540	57216887	57216780	Y	NA	PRIM2	NA	NA	NA	NA	PRIM2	38937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	57251417	57251660	57251585	Y	KIAA1586	NA	NA	NA	NA	NA	PRIM2	73814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	57267458	57267955	57267680	Y	NA	NA	NA	NA	NA	NA	PRIM2	89855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	57288314	57288720	57288442	Y	NA	NA	NA	NA	NA	NA	PRIM2	110711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	57313567	57313842	57313733	Y	NA	NA	NA	NA	NA	NA	PRIM2	135964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	57389697	57390070	57389732	Y	NA	NA	NA	NA	NA	NA	PRIM2	212094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	57408924	57409255	57409252	Y	NA	NA	NA	NA	NA	NA	PRIM2	231321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	58776280	58777091	58777029	Y	NA	NA	NA	NA	NA	NA	GUSBP4	521711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	58777244	58778438	58777771	Y	NA	NA	NA	NA	NA	NA	GUSBP4	522675	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	64151294	64151779	64151706	Y	NA	NA	NA	NA	NA	NA	PTP4A1	77887	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	64168515	64168918	64168771	Y	PTP4A1	NA	NA	NA	NA	NA	PTP4A1	60748	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.16672313429293
chr6	64220104	64220377	64220211	Y	PTP4A1	PTP4A1	PTP4A1	MCF7	ChIA-PET	22265404	PTP4A1	9289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.615165816381755
chr6	64308595	64308777	64308676	Y	NA	PHF3	NA	NA	NA	NA	PHF3	34948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.226970238467527
chr6	64398084	64398491	64398303	Y	PHF3	NA	NA	NA	NA	NA	PHF3	54359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr6	64629183	64629230	64629207	Y	NA	NA	NA	NA	NA	NA	RP11-59D5__B.2	114454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	66497701	66498057	66497748	Y	NA	NA	NA	NA	NA	NA	RP11-59D5__B.2	1982972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	70505414	70505608	70505498	Y	NA	LMBRD1	NA	NA	NA	NA	LMBRD1	411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	71906987	71907342	71907159	Y	NA	LYPLA1P3	OGFRL1,MIR30A	IMR90	Hi-C	24141950	LYPLA1P3	34208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	72294841	72295504	72295148	Y	NA	KRT19P1	RIMS1	IMR90	Hi-C	24141950	KRT19P1	2417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	73786085	73786476	73786271	Y	NA	NA	NA	NA	NA	NA	RPL39P3	294510	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	73987583	73987923	73987651	Y	NA	NA	KHDC1L	IMR90	Hi-C	24141950	RPL39P3	93063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	74186150	74186447	74186193	Y	MTO1	MTO1,EEF1A1	NA	NA	NA	NA	MTO1	16849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	74289769	74290568	74290415	Y	MB21D1,SLC17A5,CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	EEF1A1	58249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	74290752	74291151	74290952	Y	CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	EEF1A1	59232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	74295249	74295764	74295450	Y	MB21D1,CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	EEF1A1	63729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr6	74295823	74296227	74295840	Y	MB21D1,CD109,CD109,EEF1A1	NA	NA	NA	NA	NA	EEF1A1	64303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr6	75278400	75278829	75278677	Y	NA	NA	COL12A1	IMR90	Hi-C	24141950	COX7A2	679210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	79773928	79774085	79774072	Y	NA	PHIP	NA	NA	NA	NA	PHIP	11868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr6	80302449	80302781	80302615	Y	NA	SH3BGRL2	NA	NA	NA	NA	SH3BGRL2	36219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	80487784	80488033	80487927	Y	NA	NA	NA	NA	NA	NA	SH3BGRL2	148784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	80663174	80663336	80663221	Y	NA	ELOVL4,TTK	NA	NA	NA	NA	ELOVL4	7877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	80777050	80777287	80777243	Y	NA	BCKDHB	NA	NA	NA	NA	BCKDHB	37077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	82522164	82522345	82522246	Y	FAM46A	NA	BCKDHB,FAM46A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	FAM46A	61673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	82554529	82554698	82554614	Y	NA	NA	NA	NA	NA	NA	FAM46A	94038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr6	82631547	82631830	82631690	Y	NA	NA	NA	NA	NA	NA	FAM46A	171056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	82648128	82648420	82648330	Y	NA	NA	NA	NA	NA	NA	FAM46A	187637	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.3820255596287
chr6	82785578	82785603	82785590	Y	NA	NA	C9orf46	MCF7	ChIA-PET	19890323	IBTK	169868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	82953012	82953093	82953052	Y	NA	IBTK	NA	NA	NA	NA	IBTK	2378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	82956000	82956181	82956090	Y	NA	IBTK	NA	NA	NA	NA	IBTK	529	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	83737150	83737334	83737242	Y	NA	DOPEY1	NA	NA	NA	NA	DOPEY1	38051	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	83756669	83757034	83756938	Y	PGM3,DOPEY1	DOPEY1	NA	NA	NA	NA	DOPEY1	18351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	84101816	84101824	84101820	Y	NA	NA	NA	NA	NA	NA	PGM3	200161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	84877511	84877669	84877594	Y	NA	NA	NA	NA	NA	NA	KIAA1009	57684	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	84931248	84931348	84931298	Y	NA	KIAA1009	NA	NA	NA	NA	KIAA1009	4005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	86113432	86113601	86113525	Y	NT5E	RP11-30P6.6,NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	RP11-30P6.6	15528	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	86114496	86114829	86114663	Y	NT5E	RP11-30P6.6,NT5E	NT5E,SNX14	IMR90	Hi-C	24141950	RP11-30P6.6	16592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.970494355450963
chr6	86370103	86370257	86370180	Y	NA	SYNCRIP,SNHG5	NA	NA	NA	NA	SNHG5	16194	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	87881047	87881581	87881092	Y	NA	ZNF292	NA	NA	NA	NA	ZNF292	20496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	87897430	87897787	87897609	Y	NA	ZNF292	NA	NA	NA	NA	ZNF292	36879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	88183289	88183642	88183572	Y	NA	SLC35A1	NA	NA	NA	NA	SLC35A1	4948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	88213981	88214157	88214070	Y	GJB7	SLC35A1	NA	NA	NA	NA	SLC35A1	35640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	88398633	88398672	88398653	Y	NA	AKIRIN2	NA	NA	NA	NA	AKIRIN2	11255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	88401154	88401337	88401278	Y	NA	AKIRIN2	NA	NA	NA	NA	AKIRIN2	8590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.129181455201464
chr6	88408243	88408692	88408556	Y	AKIRIN2	AKIRIN2	NA	NA	NA	NA	AKIRIN2	1235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr6	88433013	88433258	88433054	Y	AKIRIN2	AKIRIN2	AKIRIN2-AS1,AKIRIN2	K562,MCF7	ChIA-PET	22265404	AKIRIN2	23086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	88499265	88499658	88499500	Y	AKIRIN2	NA	ORC3	IMR90	Hi-C	24141950	AKIRIN2	89338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr6	89440448	89440768	89440686	Y	NA	NA	NA	NA	NA	NA	RNGTT	230580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	89473318	89473558	89473438	Y	NA	NA	NA	NA	NA	NA	RNGTT	197790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	89744158	89744669	89744587	Y	UBE2J1,RRAGD,PNRC1	PNRC1	PNRC1	MCF7	ChIA-PET	22265404	PNRC1	43801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	89744998	89746016	89745827	Y	UBE2J1,PNRC1	PNRC1	PNRC1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	PNRC1	42454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr6	90031448	90031662	90031542	Y	PNRC1,UBE2J1	UBE2J1	NA	NA	NA	NA	UBE2J1	28905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	90059850	90060767	90060332	Y	RNGTT,PNRC1,UBE2J1,RRAGD	NA	NA	NA	NA	NA	UBE2J1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	90596283	90596734	90596349	Y	NA	NA	NA	NA	NA	NA	CASP8AP2	58670	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	91134952	91135221	91135020	Y	NA	NA	BACH2	IMR90	Hi-C	24141950	MAP3K7	159543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	93802046	93802077	93802062	Y	NA	NA	NA	NA	NA	NA	MANEA	2221342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	94443419	94443467	94443447	Y	NA	NA	NA	NA	NA	NA	MANEA	1579952	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	96304846	96305132	96304924	Y	NA	NA	NA	NA	NA	NA	MANEA	281427	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.21258358837254
chr6	97632369	97632997	97632691	Y	NA	NA	NA	NA	NA	NA	MMS22L	96096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	97681036	97681361	97681334	Y	NA	MMS22L	NA	NA	NA	NA	MMS22L	47732	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	99382979	99383150	99383065	Y	NA	FBXL4	NA	NA	NA	NA	FBXL4	10699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	99551894	99551958	99551925	Y	NA	NA	NA	NA	NA	NA	BDH2P1	68662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	99995359	99995841	99995579	Y	PNISR	USP45,CCNC	NA	NA	NA	NA	CCNC	19008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr6	100007525	100007878	100007702	Y	LOC100130890	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	6971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	100012296	100012415	100012356	Y	NA	USP45,CCNC,PRDM13	NA	NA	NA	NA	CCNC	2434	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	100584000	100584312	100584155	Y	NA	NA	SIM1,ASCC3	IMR90	Hi-C	24141950	RP1-121G13.3	391840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	101149750	101149957	101149936	Y	NA	NA	NA	NA	NA	NA	RP1-121G13.3	173598	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	101204667	101204976	101204826	Y	NA	NA	NA	NA	NA	NA	ASCC3	122272	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	101311437	101311450	101311446	Y	NA	ASCC3	NA	NA	NA	NA	ASCC3	15798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	105047828	105048080	105048027	Y	NA	NA	NA	NA	NA	NA	HACE1	257714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	105388915	105389637	105389155	Y	HACE1	LIN28B	NA	NA	NA	NA	LIN28B	13286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.723308143614715
chr6	105402548	105402641	105402597	Y	NA	LIN28B	NA	NA	NA	NA	LIN28B	282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr6	105443315	105443377	105443346	Y	HACE1,LIN28B	LIN28B	NA	NA	NA	NA	LIN28B	40392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	106233418	106233647	106233482	Y	PRDM1	NA	ATG5,PRDM1	IMR90	Hi-C	24141950	PREP	384459	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	106340722	106341083	106341004	Y	PRDM1	NA	PRDM1	IMR90	Hi-C	24141950	ATG5	430583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	106440406	106440671	106440473	Y	PRDM1	NA	PRDM1,ATG5	IMR90	Hi-C	24141950	ATG5	330995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr6	107014040	107014053	107014047	Y	BEND3,RTN4IP1	NA	NA	NA	NA	NA	AIM1	56310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	107047078	107047343	107047210	Y	BEND3	RTN4IP1,QRSL1	NA	NA	NA	NA	RTN4IP1	28030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	107150270	107150783	107150511	Y	NA	NA	NA	NA	NA	NA	QRSL1	74817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	107179087	107179455	107179204	Y	BEND3	NA	NA	NA	NA	NA	RP1-60O19.1	53961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	107216864	107217098	107216981	Y	NA	RP1-60O19.1	NA	NA	NA	NA	RP1-60O19.1	16318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	107773333	107773402	107773368	Y	SOBP	PDSS2,SOBP	NA	NA	NA	NA	PDSS2	5366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	107774853	107775271	107775085	Y	BEND3	PDSS2,SOBP	NA	NA	NA	NA	PDSS2	3497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	108019411	108019664	108019473	Y	NA	NA	NA	NA	NA	NA	SOBP	210249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	108324190	108324471	108324239	Y	NA	SEC63,RPL3P7	NA	NA	NA	NA	RPL3P7	301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.666111404830854
chr6	108435932	108436209	108436071	Y	NA	OSTM1	LACE1,NR2E1,ARMC2,SESN1,SEC63	IMR90,H1ESC,GM12878,HELA,K562	Hi-C,5C	24141950,22955621	OSTM1	48849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	108455044	108455377	108455332	Y	NA	OSTM1	LACE1,ARMC2,NR2E1	IMR90	Hi-C	24141950	OSTM1	29681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	108490902	108491184	108491048	Y	NA	OSTM1	NA	NA	NA	NA	OSTM1	5844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	108879164	108879427	108879300	Y	SESN1,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200343017019283
chr6	108879521	108879931	108879808	Y	SESN1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr6	108883670	108884545	108884024	Y	OSTM1,FOXO3,FOXO3	FOXO3	NA	NA	NA	NA	FOXO3	4632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.496669433574699
chr6	108951509	108952142	108951722	Y	NA	NA	NA	NA	NA	NA	FOXO3	72471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	109102631	109102946	109102736	Y	NA	NA	NA	NA	NA	NA	ARMC2	64673	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	109218749	109218814	109218782	Y	NA	RP11-249L21.4	NA	NA	NA	NA	RP11-249L21.4	8262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	109602805	109602853	109602823	Y	NA	NA	CCDC162P	IMR90	Hi-C	24141950	CD164	98909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	110094103	110094197	110094150	Y	CD164,MICAL1	NA	NA	NA	NA	NA	FIG4	83604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	110858540	110858785	110858603	Y	NA	NA	AMD1,RPF2,GTF3C6,CDK19,SLC16A10	IMR90	Hi-C	24141950	SLC22A16	62696	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr6	110870639	110870789	110870697	Y	NA	NA	RPF2,CDK19	IMR90	Hi-C	24141950	SLC22A16	74795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr6	110876210	110876587	110876395	Y	CDK19	NA	CDK19	IMR90	Hi-C	24141950	SLC22A16	80366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chr6	111025527	111025575	111025551	Y	NA	NA	NA	NA	NA	NA	CDK19	109586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	111409580	111409942	111409703	Y	AMD1,AMD1,REV3L,SLC16A10	SLC16A10	NA	NA	NA	NA	SLC16A10	2799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr6	111614404	111614762	111614615	Y	NA	RP11-428F8.2,KIAA1919	NA	NA	NA	NA	KIAA1919	35853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	111666861	111666999	111666959	Y	REV3L,FYN	NA	NA	NA	NA	NA	KIAA1919	88310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	111730761	111730999	111730880	Y	NA	NA	NA	NA	NA	NA	TRAF3IP2-AS1	71715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	111733320	111733976	111733973	Y	NA	NA	NA	NA	NA	NA	TRAF3IP2-AS1	68738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr6	111744480	111744594	111744536	Y	SLC16A10,TRAF3IP2,REV3L	NA	NA	NA	NA	NA	TRAF3IP2-AS1	58120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	111776910	111777281	111777179	Y	NA	TRAF3IP2-AS1,REV3L	NA	NA	NA	NA	TRAF3IP2-AS1	25433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr6	111784023	111784230	111784203	Y	NA	TRAF3IP2-AS1,REV3L	NA	NA	NA	NA	TRAF3IP2-AS1	18484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	111808995	111809308	111809091	Y	REV3L,FYN,TRAF3IP2	TRAF3IP2-AS1,REV3L	NA	NA	NA	NA	REV3L	6077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	111841823	111842197	111842010	Y	NA	TRAF3IP2-AS1,REV3L	NA	NA	NA	NA	REV3L	38905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	112068361	112068832	112068769	Y	REV3L,FYN,FYN,FYN	NA	NA	NA	NA	NA	FYN	123823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	112078631	112078983	112078811	Y	REV3L,FYN,FYN,FYN	NA	NA	NA	NA	NA	FYN	113672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	112116190	112116657	112116390	Y	NA	NA	NA	NA	NA	NA	FYN	75998	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr6	112145008	112145393	112145362	Y	REV3L,TRAF3IP2,FYN,FYN,FYN	FYN	NA	NA	NA	NA	FYN	47262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	113673815	113673995	113673934	Y	NA	NA	LAMA4,FLJ34503,MARCKS	IMR90	Hi-C	24141950	RP11-367G18.1	295281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	113772353	113772409	113772395	Y	NA	NA	MARCKS,FLJ34503	IMR90	Hi-C	24141950	RP11-367G18.1	196867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	113964677	113964926	113964790	Y	NA	RP11-367G18.1	MARCKS	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-367G18.1	4350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	114005806	114006016	114005966	Y	NA	RP11-367G18.1	NA	NA	NA	NA	RP11-367G18.1	36530	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	114176108	114176553	114176196	Y	MARCKS	NA	NA	NA	NA	NA	MARCKS	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	114391441	114391608	114391525	Y	HS3ST5	NA	NA	NA	NA	NA	HDAC2	60969	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	114478315	114478345	114478330	Y	NA	NA	NA	NA	NA	NA	HDAC2	147843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	114491124	114491199	114491145	Y	NA	NA	NA	NA	NA	NA	HDAC2	160652	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.03130237330188
chr6	114603610	114603654	114603632	Y	NA	NA	NA	NA	NA	NA	HS3ST5	58555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	114662111	114662444	114662262	Y	NA	NA	NA	NA	NA	NA	HS3ST5	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.241266589928996
chr6	114662587	114662962	114662866	Y	NA	HS3ST5	NA	NA	NA	NA	HS3ST5	378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.599223667327918
chr6	114664746	114665107	114665068	Y	NA	HS3ST5	NA	NA	NA	NA	HS3ST5	2537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr6	115163170	115163515	115163320	Y	NA	NA	NA	NA	NA	NA	HS3ST5	500961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	116550472	116550927	116550585	Y	KPNA5,TSPYL4,TSPYL1	TSPYL4,RP3-486I3.4,TSPYL1	NA	NA	NA	NA	TSPYL4	22334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	116988703	116988966	116988944	Y	DSE,ZUFSP,KPNA5	ZUFSP,KPNA5	NA	NA	NA	NA	ZUFSP	746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	117585963	117586004	117585985	Y	NA	NA	NA	NA	NA	NA	DCBLD1	186976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	117804575	117804878	117804739	Y	NA	DCBLD1	NA	NA	NA	NA	DCBLD1	31595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.387703951741955
chr6	117914764	117915043	117914904	Y	NA	GOPC	NA	NA	NA	NA	GOPC	6648	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	118009013	118009297	118009155	Y	NA	NUS1	NA	NA	NA	NA	NUS1	14348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	118246881	118246985	118246933	Y	SLC35F1	NA	NA	NA	NA	NA	RP11-632C17__A.1	71153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	119151345	119151482	119151449	Y	MCM9	NA	NA	NA	NA	NA	ASF1A	61902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	119214275	119214495	119214295	Y	C6orf204,C6orf204,FAM184A,MCM9,ASF1A	ASF1A,MCM9	NA	NA	NA	NA	ASF1A	891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	119217591	119217640	119217616	Y	NA	ASF1A,MCM9	NA	NA	NA	NA	ASF1A	4207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	119218988	119219366	119219177	Y	MCM9	ASF1A,MCM9	NA	NA	NA	NA	ASF1A	5604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	119468463	119468799	119468540	Y	FAM184A	NA	NA	NA	NA	NA	FAM184A	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr6	119606195	119606320	119606258	Y	NA	NA	NA	NA	NA	NA	MAN1A1	62606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	119634187	119634405	119634308	Y	MCM9,MAN1A1	MAN1A1	NA	NA	NA	NA	MAN1A1	34521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	119635586	119635800	119635693	Y	MCM9	MAN1A1	NA	NA	NA	NA	MAN1A1	33126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	119661427	119661533	119661480	Y	MAN1A1	MAN1A1	NA	NA	NA	NA	MAN1A1	7393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr6	119668375	119668773	119668762	Y	NA	MAN1A1	NA	NA	NA	NA	MAN1A1	153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr6	120445667	120446036	120445852	Y	NA	NA	NA	NA	NA	NA	MAN1A1	776741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	123111983	123112340	123112183	Y	PKIB,SMPDL3A	SMPDL3A	NA	NA	NA	NA	SMPDL3A	3668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.471688009718822
chr6	125622252	125622475	125622321	Y	NA	HDDC2	NA	NA	NA	NA	HDDC2	970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	126112858	126113033	126112985	Y	TRMT11,HINT3,NCOA7	HEY2,NCOA7	NA	NA	NA	NA	NCOA7	12551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	126241150	126241321	126241235	Y	NCOA7	HINT3	NA	NA	NA	NA	HINT3	34606	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr6	126265741	126265870	126265827	Y	NCOA7	HINT3,TRMT11	NA	NA	NA	NA	HINT3	10057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr6	126279126	126279509	126279187	Y	NCOA7	HINT3,TRMT11	NA	NA	NA	NA	HINT3	3199	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr6	126579500	126579620	126579560	Y	NA	NA	NA	NA	NA	NA	CENPW	79700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	126621398	126621727	126621563	Y	NA	CENPW	NA	NA	NA	NA	CENPW	37593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	127618608	127618885	127618797	Y	NA	RNF146,ECHDC1	NA	NA	NA	NA	RNF146	32853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	127638757	127639069	127638966	Y	NA	ECHDC1	NA	NA	NA	NA	ECHDC1	23685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	127907573	127907629	127907601	Y	NA	NA	NA	NA	NA	NA	RP3-403A15.1	152792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	127980874	127981174	127981075	Y	NA	NA	NA	NA	NA	NA	RP3-403A15.1	226093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr6	127981338	127981402	127981371	Y	NA	NA	NA	NA	NA	NA	RP3-403A15.1	226557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	128293064	128293422	128293333	Y	NA	NA	NA	NA	NA	NA	RP3-403A15.1	538283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	128331151	128331455	128331303	Y	NA	NA	NA	NA	NA	NA	PTPRK	508415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	128607751	128608140	128608092	Y	NA	NA	NA	NA	NA	NA	PTPRK	231730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.40709728211809
chr6	128617083	128617221	128617152	Y	NA	NA	NA	NA	NA	NA	PTPRK	222649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	128637396	128637725	128637581	Y	NA	NA	NA	NA	NA	NA	PTPRK	202145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr6	128675135	128675339	128675237	Y	PTPRK,PTPRK	NA	NA	NA	NA	NA	PTPRK	164531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr6	128747260	128747445	128747404	Y	NA	NA	NA	NA	NA	NA	PTPRK	92425	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	128754727	128754989	128754858	Y	PTPRK,PTPRK	NA	NA	NA	NA	NA	PTPRK	84881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	128793943	128794334	128794205	Y	NA	PTPRK	NA	NA	NA	NA	PTPRK	45536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	128816273	128816626	128816620	Y	NA	PTPRK	NA	NA	NA	NA	PTPRK	23244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	128830157	128830356	128830243	Y	NA	PTPRK	NA	NA	NA	NA	PTPRK	9514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	128840669	128840970	128840936	Y	PTPRK,PTPRK	PTPRK	NA	NA	NA	NA	PTPRK	799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.383430127427072
chr6	129250577	129251100	129251039	Y	NA	NA	NA	NA	NA	NA	PTPRK	410707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	129816833	129816992	129816913	Y	ARHGAP18	NA	NA	NA	NA	NA	ARHGAP18	212378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	129822062	129822220	129822139	Y	NA	NA	NA	NA	NA	NA	ARHGAP18	207150	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	129855341	129855708	129855581	Y	ARHGAP18	NA	NA	NA	NA	NA	ARHGAP18	173662	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr6	129989152	129989478	129989315	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	39892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	129994496	129994751	129994657	Y	ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	34619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr6	130001069	130001170	130001133	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	28200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	130004742	130004922	130004817	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	24448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	130005105	130005433	130005370	Y	L3MBTL3,ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	23937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.655597763119195
chr6	130008447	130008678	130008538	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	20692	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	130018003	130018247	130018173	Y	ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	11123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	130022144	130022554	130022402	Y	L3MBTL3,ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	6816	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	130029105	130029310	130029206	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	60	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	130029433	130029625	130029566	Y	NA	ARHGAP18	NA	NA	NA	NA	ARHGAP18	63	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.263619475455158
chr6	130030425	130030727	130030721	Y	ARHGAP18	ARHGAP18	NA	NA	NA	NA	ARHGAP18	1055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr6	130069572	130069764	130069691	Y	NA	ARHGAP18	ARHGAP18,L3MBTL3	IMR90	Hi-C	24141950	ARHGAP18	40202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	130342212	130342458	130342393	Y	SAMD3,SAMD3,L3MBTL3	L3MBTL3	NA	NA	NA	NA	L3MBTL3	9368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	131146297	131146332	131146315	Y	NA	SMLR1	NA	NA	NA	NA	SMLR1	214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	131386975	131387183	131387097	Y	EPB41L2,EPB41L2	EPB41L2	EPB41L2,AKAP7	IMR90	Hi-C	24141950	EPB41L2	4513	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	131527646	131527881	131527784	Y	NA	NA	NA	NA	NA	NA	AKAP7	72840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	131594186	131594488	131594335	Y	AKAP7,MED23,AKAP7	NA	NA	NA	NA	NA	AKAP7	139380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	131595636	131595766	131595737	Y	MED23,AKAP7	NA	NA	NA	NA	NA	AKAP7	140830	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	131929733	131930009	131929873	Y	NA	ARG1,MED23,ENPP3,RNU4-18P	NA	NA	NA	NA	MED23	17360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	131961253	131961437	131961342	Y	NA	MED23,ENPP3,RNU4-18P	NA	NA	NA	NA	RNU4-18P	669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	132057565	132057807	132057687	Y	NA	RP5-988G15.1	NA	NA	NA	NA	RP5-988G15.1	42645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	132274150	132274356	132274277	Y	NA	CTGF	NA	NA	NA	NA	CTGF	3637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	132297518	132297793	132297656	Y	NA	CTGF	CTGF,ENPP1,MOXD1	IMR90,H1ESC,HELA	Hi-C,5C	24141950,22955621	CTGF	27005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	132811280	132811490	132811390	Y	VNN2,VNN2,VNN2,VNN1,STX7	STX7	NA	NA	NA	NA	STX7	20847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	132811730	132811823	132811772	Y	NA	STX7	NA	NA	NA	NA	STX7	20514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	132832416	132832580	132832524	Y	VNN1,STX7	STX7	NA	NA	NA	NA	STX7	79	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	133057339	133057671	133057545	Y	STX7,VNN1,VNN2,VNN2	VNN1,VNN3	NA	NA	NA	NA	VNN3	3435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	133133336	133133580	133133458	Y	NA	SNORD101	NA	NA	NA	NA	RPS12	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chr6	133134288	133134908	133134317	Y	NA	RPS12	NA	NA	NA	NA	SNORD101	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr6	134264415	134264799	134264607	Y	NA	TBPL1	TBPL1,SLC2A12	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	TBPL1	6509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	134561748	134562207	134561964	Y	SGK1,SGK1	NA	NA	NA	NA	NA	SGK1	75043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	134620325	134620468	134620398	Y	NA	SGK1	NA	NA	NA	NA	SGK1	16782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	135235486	135235616	135235552	Y	NA	ALDH8A1	NA	NA	NA	NA	ALDH8A1	33644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	135344059	135344242	135344151	Y	NA	NA	NA	NA	NA	NA	ALDH8A1	74799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	135352829	135352991	135352910	Y	NA	NA	NA	NA	NA	NA	HBS1L	69203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	135707385	135707414	135707388	Y	NA	NA	NA	NA	NA	NA	LINC00271	109075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	137538142	137538256	137538167	Y	NA	IFNGR1	NA	NA	NA	NA	IFNGR1	330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	137555218	137555651	137555304	Y	MAP3K5,IFNGR1	IFNGR1	IFNGR1,OLIG3	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	IFNGR1	16632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	137671381	137671752	137671510	Y	NA	NA	NA	NA	NA	NA	IFNGR1	132795	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.00632094944601
chr6	137678748	137679081	137678969	Y	NA	NA	NA	NA	NA	NA	IFNGR1	140162	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.02339677039767
chr6	138027517	138027801	138027604	Y	NA	NA	TNFAIP3,PERP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	158550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	138045007	138045495	138045466	Y	NA	NA	TNFAIP3,PERP	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	140856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.874019841349758
chr6	138049891	138050457	138050087	Y	TNFAIP3	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	135894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	138053118	138053503	138053361	Y	TNFAIP3	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	132848	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.00903061982496
chr6	138055973	138056386	138056068	Y	TNFAIP3	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	129965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr6	138115195	138115471	138115327	Y	NA	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	70880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	138115529	138115913	138115812	Y	TNFAIP3	NA	TNFAIP3	IMR90	Hi-C	24141950	TNFAIP3	70438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.26756228294973
chr6	138121024	138121385	138121171	Y	TNFAIP3	NA	TNFAIP3	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	64966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	138131793	138132158	138131947	Y	TNFAIP3	NA	TNFAIP3	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	54193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	138132277	138133056	138132650	Y	TNFAIP3	NA	TNFAIP3	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNFAIP3	53295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr6	138194322	138194912	138194642	Y	TNFAIP3	TNFAIP3	NA	NA	NA	NA	TNFAIP3	7971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	138225639	138226065	138225836	Y	TNFAIP3	TNFAIP3	NA	NA	NA	NA	TNFAIP3	39288	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	138426575	138426770	138426671	Y	PERP	NA	NA	NA	NA	NA	PERP	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	138427134	138427492	138427302	Y	PERP	PERP	NA	NA	NA	NA	PERP	486	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	138495604	138495926	138495622	Y	NA	KIAA1244	NA	NA	NA	NA	KIAA1244	14546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	138523816	138523995	138523837	Y	NA	KIAA1244	NA	NA	NA	NA	KIAA1244	42758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	138552516	138552583	138552548	Y	NA	NA	NA	NA	NA	NA	KIAA1244	71458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	138776959	138777186	138777132	Y	PBOV1	NA	NA	NA	NA	NA	HEBP2	54291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	138786189	138786282	138786236	Y	NA	NA	NA	NA	NA	NA	HEBP2	63521	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	138821349	138821443	138821380	Y	REPS1,NHSL1	NA	NA	NA	NA	NA	HEBP2	98681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.635872904315549
chr6	138862383	138862798	138862711	Y	PBOV1	NA	NA	NA	NA	NA	HEBP2	139715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.318679302081577
chr6	138876782	138877039	138876959	Y	NA	NA	NA	NA	NA	NA	NHSL1	134669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr6	138890859	138891324	138891176	Y	PBOV1,NHSL1	NA	NA	NA	NA	NA	NHSL1	120384	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.09967581065243
chr6	138914342	138914559	138914540	Y	NA	NA	HEBP2,NHSL1,LOC100507462,PERP,CCDC28A,ECT2L,FLJ46906	IMR90	Hi-C	24141950	NHSL1	97149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.497492076567283
chr6	139300314	139300341	139300327	Y	NHSL1	REPS1	NA	NA	NA	NA	REPS1	7057	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	139304978	139305148	139305081	Y	NA	REPS1	NA	NA	NA	NA	REPS1	2250	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	139348964	139349250	139349073	Y	NA	REPS1	NA	NA	NA	NA	REPS1	41566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	139350632	139351255	139350885	Y	NA	REPS1	NA	NA	NA	NA	REPS1	43234	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr6	139899473	139899647	139899531	Y	CITED2,CITED2,CITED2	NA	CITED2,LOC645434	IMR90	Hi-C	24141950	CITED2	205716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	139918701	139919066	139919016	Y	CITED2,CITED2,CITED2	NA	CITED2	IMR90	Hi-C	24141950	CITED2	224944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	140085604	140086085	140085978	Y	CITED2,CITED2,CITED2	NA	TXLNB,CITED2,LOC645434,LOC100132735	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CITED2	391847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	140299062	140299512	140299364	Y	NA	NA	CITED2,HECA	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	CITED2	605305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	140858869	140859245	140859045	Y	NA	NA	LOC100132735	IMR90	Hi-C	24141950	CITED2	1165112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	141204403	141204777	141204486	Y	NA	NA	NA	NA	NA	NA	VTA1	1261590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	142091291	142091499	142091406	Y	VTA1	NA	NA	NA	NA	NA	VTA1	374868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	142508557	142508921	142508635	Y	NA	VTA1	NA	NA	NA	NA	VTA1	42190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	142644630	142644955	142644766	Y	NA	GPR126	NA	NA	NA	NA	GPR126	23639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	142648297	142648491	142648394	Y	NA	GPR126	NA	NA	NA	NA	GPR126	27306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	142698366	142698689	142698587	Y	NA	NA	NA	NA	NA	NA	GPR126	77375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr6	143141084	143141442	143141235	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	122896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	143143599	143143667	143143633	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	120671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	143166332	143166721	143166456	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	97617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	143174967	143175237	143175142	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	89101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	143192899	143193375	143193200	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	70963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	143206296	143206927	143206703	Y	HIVEP2	NA	NA	NA	NA	NA	HIVEP2	57411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	143223836	143224147	143224035	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	40191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	143234166	143234456	143234293	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	29882	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	143247398	143248213	143248022	Y	HIVEP2	HIVEP2	NA	NA	NA	NA	HIVEP2	16125	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.22005870923865
chr6	143248323	143248614	143248469	Y	NA	HIVEP2	NA	NA	NA	NA	HIVEP2	15724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	143503002	143503176	143503018	Y	NA	NA	NA	NA	NA	NA	AIG1	123369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr6	143516746	143517148	143516792	Y	NA	NA	NA	NA	NA	NA	AIG1	137113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	143718495	143718881	143718689	Y	NA	NA	AIG1	IMR90	Hi-C	24141950	ADAT2	50929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr6	143770817	143770943	143770879	Y	ADAT2	ADAT2,PEX3	NA	NA	NA	NA	PEX3	873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr6	143994840	143994998	143994919	Y	NA	NA	NA	NA	NA	NA	PHACTR2	138858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	144007310	144007644	144007477	Y	NA	NA	NA	NA	NA	NA	PHACTR2	151328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	144053697	144053884	144053799	Y	STX11,PLAGL1	NA	NA	NA	NA	NA	LTV1	108597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	144064569	144064840	144064663	Y	NA	NA	NA	NA	NA	NA	LTV1	97641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	144066654	144067070	144066822	Y	NA	NA	NA	NA	NA	NA	LTV1	95411	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.74089557865372
chr6	144067695	144068059	144067958	Y	NA	NA	NA	NA	NA	NA	LTV1	94422	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198206104861841
chr6	144129010	144129242	144129156	Y	STX11,PLAGL1	LTV1	NA	NA	NA	NA	LTV1	33239	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	144537313	144537754	144537668	Y	NA	TPT1P4	STX11,SF3B5	MCF7,K562	ChIA-PET	22265404	TPT1P4	17211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	144585551	144585700	144585606	Y	NA	UTRN	UTRN	IMR90	Hi-C	24141950	UTRN	19137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr6	144587251	144587368	144587331	Y	NA	UTRN	UTRN,STX11	IMR90	Hi-C	24141950	UTRN	17469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	144931961	144932452	144932213	Y	NA	NA	NA	NA	NA	NA	UTRN	327124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	144975415	144975576	144975532	Y	NA	NA	NA	NA	NA	NA	UTRN	370578	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	144982592	144982877	144982735	Y	NA	NA	NA	NA	NA	NA	UTRN	377755	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr6	145131744	145132215	145131879	Y	NA	NA	NA	NA	NA	NA	UTRN	526907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	145588326	145588537	145588434	Y	NA	NA	NA	NA	NA	NA	EPM2A	466623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.382938501254799
chr6	146867560	146867942	146867733	Y	RAB32	RAB32	NA	NA	NA	NA	RAB32	4731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	147124877	147125201	147125102	Y	NA	NA	NA	NA	NA	NA	RAB32	262048	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	147985018	147985058	147985038	Y	NA	RP11-307P5.1	NA	NA	NA	NA	RP11-307P5.1	5179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr6	148823673	148823949	148823781	Y	NA	NA	NA	NA	NA	NA	SASH1	232233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	149799701	149800108	149800009	Y	LATS1,TAB2,PPIL4,ZC3H12D	ZC3H12D	NA	NA	NA	NA	ZC3H12D	4089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	149829691	149830032	149829852	Y	LATS1,KATNA1,TAB2,SUMO4,ZC3H12D,PPIL4	ZC3H12D,PPIL4	NA	NA	NA	NA	ZC3H12D	25494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	150010989	150011176	150011138	Y	NA	KATNA1,LATS1	NA	NA	NA	NA	LATS1	26216	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr6	150075680	150075936	150075837	Y	SUMO4	LATS1,PCMT1,NUP43	NA	NA	NA	NA	NUP43	6879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	150076607	150076998	150076645	Y	KATNA1,LATS1	LATS1,PCMT1,NUP43	NA	NA	NA	NA	NUP43	7806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	150183311	150183513	150183478	Y	NA	LRP11	NA	NA	NA	NA	LRP11	686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr6	150200694	150201094	150200866	Y	NA	LRP11,RAET1G	NA	NA	NA	NA	LRP11	16495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	151005431	151005610	151005521	Y	NA	NA	NA	NA	NA	NA	PLEKHG1	86432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	151178145	151178545	151178467	Y	MTHFD1L	MTHFD1L	NA	NA	NA	NA	MTHFD1L	6140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	151246480	151246919	151246675	Y	ZBTB2	RP1-99E18.2	NA	NA	NA	NA	RP1-99E18.2	7185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	151248402	151248558	151248480	Y	NA	RP1-99E18.2	NA	NA	NA	NA	RP1-99E18.2	5546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	151365804	151366060	151365928	Y	NA	NA	NA	NA	NA	NA	RP1-292B18.1	52605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	151366767	151366942	151366858	Y	NA	NA	NA	NA	NA	NA	RP1-292B18.1	51723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	151366985	151367228	151367157	Y	NA	NA	NA	NA	NA	NA	RP1-292B18.1	51437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	151381285	151381592	151381452	Y	NA	RP1-292B18.1	NA	NA	NA	NA	RP1-292B18.1	37073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.173224681005965
chr6	151634197	151634634	151634284	Y	NA	NA	NA	NA	NA	NA	AKAP12	75063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	151701197	151701769	151701451	Y	C6orf97,ZBTB2	ZBTB2	NA	NA	NA	NA	ZBTB2	8914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr6	151730569	151730753	151730690	Y	NA	ZBTB2,RMND1,C6orf211	NA	NA	NA	NA	ZBTB2	19886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr6	151770191	151770744	151770510	Y	NA	RMND1,C6orf211	NA	NA	NA	NA	RMND1	515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	151815811	151815987	151815867	Y	ESR1,ESR1,ESR1,ESR1,C6orf97	RMND1,C6orf211	NA	NA	NA	NA	C6orf211	44389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.819942755460683
chr6	151973040	151973410	151973224	Y	NA	NA	NA	NA	NA	NA	C6orf211	201618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	151990047	151990437	151990162	Y	NA	NA	ESR1,RMND1,C6orf211,SYNE1,C6orf97	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	C6orf211	218625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.477276103198563
chr6	152492317	152492580	152492431	Y	SYNE1	NA	NA	NA	NA	NA	SYNE1	464356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	152583976	152584217	152584151	Y	NA	NA	NA	NA	NA	NA	SYNE1	372719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	152634983	152635621	152635105	Y	NA	NA	NA	NA	NA	NA	SYNE1	321315	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.23756501222842
chr6	154753926	154754309	154754118	Y	CNKSR3	NA	NA	NA	NA	NA	CNKSR3	75484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	154798068	154798417	154798243	Y	NA	CNKSR3	NA	NA	NA	NA	CNKSR3	31376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	154830409	154830718	154830573	Y	CNKSR3	CNKSR3	NA	NA	NA	NA	CNKSR3	616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.214970896908263
chr6	155179611	155179904	155179758	Y	NA	TIAM2	TIAM2	IMR90	Hi-C	24141950	TIAM2	27780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	155181312	155181660	155181451	Y	TIAM2,TIAM2	TIAM2	TIAM2	IMR90	Hi-C	24141950	TIAM2	29481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	155306251	155306499	155306375	Y	TIAM2	NA	TIAM2,TFB1M,CLDN20	IMR90	Hi-C	24141950	TIAM2	154420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	155545212	155545590	155545426	Y	SCAF8	RP11-477D19.2	NA	NA	NA	NA	RP11-477D19.2	30268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	155590165	155590417	155590245	Y	NA	RP11-477D19.2,TFB1M	NA	NA	NA	NA	RP11-477D19.2	14307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.210205446421106
chr6	155593046	155593119	155593050	Y	NA	RP11-477D19.2,TFB1M	NA	NA	NA	NA	RP11-477D19.2	17188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	155636183	155636317	155636271	Y	NA	TFB1M	NA	NA	NA	NA	TFB1M	2556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.687641647364432
chr6	155649228	155649931	155649893	Y	NA	TFB1M	ARID1B,MIR4466	IMR90	Hi-C	24141950	TFB1M	15601	CAGE	HepG2 ENCODE	hg19	FANTOM5	26.426329696397
chr6	155720306	155720884	155720629	Y	TFB1M	NA	NA	NA	NA	NA	TFB1M	86679	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.53091137411154
chr6	155809000	155809155	155809076	Y	TIAM2,TFB1M	NA	TFB1M,NOX3	IMR90	Hi-C	24141950	TFB1M	175373	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.32976570201474
chr6	155850166	155850642	155850364	Y	NA	NA	NA	NA	NA	NA	TFB1M	216539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	157007979	157008724	157008580	Y	ARID1B	NA	MIR4466,ARID1B,NOX3	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	ARID1B	88339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.309308498852027
chr6	157041058	157041538	157041248	Y	ARID1B	NA	ARID1B,MIR4466	K562,IMR90,MCF7	ChIA-PET,Hi-C	22265404,24141950	ARID1B	55525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr6	157096939	157097165	157097038	Y	NA	NA	NA	NA	NA	NA	ARID1B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	157097774	157098131	157097933	Y	NA	ARID1B	NA	NA	NA	NA	ARID1B	711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	157101566	157102083	157101700	Y	ARID1B	ARID1B	NA	NA	NA	NA	ARID1B	4503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.348917802596883
chr6	157110744	157110907	157110826	Y	NA	ARID1B	NA	NA	NA	NA	ARID1B	13681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	157160663	157161314	157160954	Y	NA	NA	NA	NA	NA	NA	ARID1B	63600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr6	157162870	157163071	157163026	Y	NA	NA	NA	NA	NA	NA	ARID1B	65807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr6	157267788	157267851	157267817	Y	NA	NA	NA	NA	NA	NA	ARID1B	170725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr6	157299126	157299275	157299174	Y	NA	NA	NA	NA	NA	NA	ARID1B	202063	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	157342507	157343524	157343342	Y	ARID1B,ZDHHC14	NA	NA	NA	NA	NA	ARID1B	245444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.666442933258365
chr6	157421397	157421571	157421514	Y	ARID1B	NA	NA	NA	NA	NA	TMEM242	321062	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	157542479	157542718	157542566	Y	NA	NA	NA	NA	NA	NA	TMEM242	199915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr6	157726321	157726550	157726459	Y	NA	TMEM242	NA	NA	NA	NA	TMEM242	16083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	157738321	157738749	157738506	Y	NA	TMEM242	NA	NA	NA	NA	TMEM242	3884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr6	157881944	157882245	157882133	Y	ZDHHC14,SNX9	NA	NA	NA	NA	NA	ZDHHC14	81779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr6	158184460	158184689	158184561	Y	SNX9	NA	SNX9,TMEM242,ZDHHC14,SYNJ2	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	SNX9	57607	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268384925942314
chr6	158254729	158255396	158255020	Y	NA	SNX9	NA	NA	NA	NA	SNX9	12433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351054714754325
chr6	158314373	158314686	158314419	Y	SNX9	NA	NA	NA	NA	NA	SNX9	72077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	158375265	158375579	158375328	Y	NA	SYNJ2	NA	NA	NA	NA	SYNJ2	25309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.292052080633333
chr6	158452388	158452885	158452569	Y	SNX9	NA	NA	NA	NA	NA	SYNJ2	51500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	158472000	158472226	158472116	Y	NA	NA	NA	NA	NA	NA	SYNJ2	71112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	158595666	158595874	158595793	Y	NA	SERAC1,GTF2H5	NA	NA	NA	NA	GTF2H5	8282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	158640222	158640658	158640460	Y	SNX9	NA	NA	NA	NA	NA	GTF2H5	52838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	158670119	158670409	158670245	Y	NA	NA	TULP4,TMEM181	IMR90	Hi-C	24141950	GTF2H5	82735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr6	158808734	158809093	158808911	Y	TMEM181	NA	NA	NA	NA	NA	TMEM181	146375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	158981403	158981866	158981661	Y	NA	TMEM181	NA	NA	NA	NA	TMEM181	25935	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.49312795361889
chr6	158982051	158982465	158982168	Y	NA	TMEM181	NA	NA	NA	NA	TMEM181	26583	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr6	158987674	158988091	158987879	Y	NA	TMEM181	NA	NA	NA	NA	TMEM181	32206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr6	159076335	159076366	159076351	Y	TAGAP,SYTL3	DYNLT1	NA	NA	NA	NA	DYNLT1	12564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	159226894	159227283	159227272	Y	NA	EZR	NA	NA	NA	NA	EZR	11161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	159229924	159230242	159230166	Y	TAGAP,SYTL3,EZR,EZR	EZR	NA	NA	NA	NA	EZR	8202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	159237852	159238517	159238245	Y	TAGAP,SYTL3,EZR,EZR	NA	NA	NA	NA	NA	EZR	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	159270971	159271326	159271104	Y	TAGAP,SYTL3,EZR,EZR	EZR	NA	NA	NA	NA	EZR	32527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr6	159416474	159416597	159416565	Y	NA	RSPH3	NA	NA	NA	NA	RSPH3	2622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	160141572	160141909	160141740	Y	MAS1,IGF2R,SOD2,WTAP,WTAP	WTAP,ACAT2,SOD2	LOC100129518,ACAT2,WTAP,SOD2	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	WTAP	2708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr6	160144181	160144267	160144224	Y	NA	WTAP,ACAT2,SOD2	NA	NA	NA	NA	WTAP	350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	160179285	160179503	160179396	Y	NA	WTAP,SOD2,TCP1,MRPL18	NA	NA	NA	NA	ACAT2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	160399624	160399885	160399732	Y	SOD2,WTAP,WTAP,MAS1	IGF2R	NA	NA	NA	NA	IGF2R	11493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	160400282	160400543	160400410	Y	SOD2,WTAP,WTAP,IGF2R	IGF2R	NA	NA	NA	NA	IGF2R	12151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	160839575	160839730	160839653	Y	NA	NA	NA	NA	NA	NA	SLC22A3	72275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	163107728	163108018	163107873	Y	PARK2,PACRG	PARK2	NA	NA	NA	NA	PARK2	38785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	163817744	163818245	163818151	Y	NA	CAHM,QKI	NA	NA	NA	NA	CAHM	14747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	163826910	163827186	163827117	Y	QKI	CAHM,QKI	NA	NA	NA	NA	CAHM	5806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	163833338	163833600	163833428	Y	QKI	CAHM,QKI	NA	NA	NA	NA	QKI	306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr6	163833938	163834442	163834340	Y	NA	CAHM,QKI	NA	NA	NA	NA	QKI	906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr6	163840967	163841346	163841003	Y	NA	CAHM,QKI	NA	NA	NA	NA	QKI	7935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	163972161	163972427	163972234	Y	NA	NA	NA	NA	NA	NA	QKI	139129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr6	163976539	163976874	163976679	Y	NA	NA	NA	NA	NA	NA	QKI	143507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	164520797	164520864	164520831	Y	NA	NA	NA	NA	NA	NA	QKI	687765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	166422302	166422862	166422743	Y	NA	NA	NA	NA	NA	NA	SFT2D1	331217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	166754936	166755437	166755076	Y	SFT2D1	SFT2D1	NA	NA	NA	NA	SFT2D1	857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	166765505	166765751	166765595	Y	NA	SFT2D1	NA	NA	NA	NA	SFT2D1	11426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	166795008	166795404	166795174	Y	NA	SFT2D1	NA	NA	NA	NA	SFT2D1	40929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr6	166964478	166964522	166964502	Y	NA	NA	NA	NA	NA	NA	SFT2D1	210399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	167060808	167061200	167060975	Y	PRR18,RPS6KA2	NA	NA	NA	NA	NA	RP11-514O12.4	306412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	167069842	167070191	167069884	Y	PRR18	NA	NA	NA	NA	NA	RP11-514O12.4	297421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	167115544	167115618	167115576	Y	NA	NA	NA	NA	NA	NA	RP11-514O12.4	251994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr6	167363867	167364047	167363941	Y	GPR31,CCR6,CCR6,RNASET2	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	RP11-514O12.4	3565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	167372859	167373027	167372950	Y	GPR31,RNASET2	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	RNASET2	4180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr6	167395299	167395692	167395496	Y	NA	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	RP1-167A14.2	14861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	167411045	167411413	167411177	Y	NA	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	FGFR1OP	375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr6	167411692	167411848	167411735	Y	RNASET2,GPR31	RP11-514O12.4,RNASET2,RP1-167A14.2,FGFR1OP	NA	NA	NA	NA	FGFR1OP	1022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr6	167633568	167633756	167633659	Y	UNC93A	UNC93A	NA	NA	NA	NA	UNC93A	48901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.891767374133524
chr6	167722257	167722471	167722311	Y	FGFR1OP,UNC93A	UNC93A	NA	NA	NA	NA	UNC93A	39600	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.13229194151197
chr6	167834861	167835135	167834902	Y	NA	NA	SMOC2	IMR90	Hi-C	24141950	UNC93A	152204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr6	167837583	167837890	167837668	Y	FGFR1OP,UNC93A,MLLT4	NA	SMOC2	IMR90	Hi-C	24141950	UNC93A	154926	CAGE	HepG2 ENCODE	hg19	FANTOM5	6.45209677212149
chr6	168076868	168077090	168076978	Y	UNC93A	NA	NA	NA	NA	NA	MLLT4	148512	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.13813043136999
chr6	168198261	168198623	168198456	Y	NA	MLLT4	NA	NA	NA	NA	MLLT4	26979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	168250541	168251043	168250675	Y	NA	MLLT4	NA	NA	NA	NA	MLLT4	24939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr6	168356861	168357132	168356996	Y	NA	NA	NA	NA	NA	NA	MLLT4	131259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr6	168558082	168558596	168558447	Y	NA	NA	NA	NA	NA	NA	DACT2	159838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr6	169278156	169278506	169278379	Y	NA	NA	WDR27,LINC00574	IMR90	Hi-C	24141950	THBS2	373633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	169308928	169309266	169309084	Y	THBS2	NA	WDR27,LINC00574,PHF10,C6orf70,PSMB1,SMOC2,LINC00242	IMR90	Hi-C	24141950	THBS2	342873	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246854683408737
chr6	169986941	169987258	169987132	Y	NA	NA	NA	NA	NA	NA	WDR27	112901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr6	170020305	170020690	170020593	Y	NA	NA	NA	NA	NA	NA	WDR27	79469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr6	170203615	170204008	170203729	Y	NA	NA	NA	NA	NA	NA	TCTE3	53960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr6	170208297	170208700	170208496	Y	NA	NA	NA	NA	NA	NA	TCTE3	58642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr6	170589556	170589600	170589578	Y	WDR27,TCTE3,TBP	FAM120B	NA	NA	NA	NA	FAM120B	8191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr6	170838453	170838652	170838543	Y	NA	PSMB1,TBP	NA	NA	NA	NA	PSMB1	21777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	373094	373351	373247	Y	PRKAR1B	NA	FLJ44511,PDGFA	MCF7	ChIA-PET	22265404	AC093627.12	180914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.318347773654067
chr7	387969	388196	388081	Y	PDGFA	NA	NA	NA	NA	NA	PDGFA	169737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	416236	416525	416371	Y	NA	NA	NA	NA	NA	NA	PDGFA	141408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	475920	475996	475984	Y	NA	NA	HEATR2,PRKAR1B	MCF7	ChIA-PET	22265404	PDGFA	81937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr7	525455	525590	525542	Y	GET4,PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	32343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	543299	543586	543435	Y	GET4,CYP2W1,PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	14347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr7	577876	578141	578015	Y	PRKAR1B,PRKAR1B,HEATR2,GET4,PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	19943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr7	579426	579712	579625	Y	PRKAR1B,PRKAR1B,GET4,PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	21493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.569145264557375
chr7	592302	592713	592583	Y	PDGFA	PDGFA	NA	NA	NA	NA	PDGFA	34369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.454431591500128
chr7	652642	652893	652768	Y	PRKAR1B,ADAP1	NA	NA	NA	NA	NA	PDGFA	94709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.099925695423505
chr7	657520	657797	657766	Y	CYP2W1	NA	NA	NA	NA	NA	PDGFA	99587	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.76069023656861
chr7	658155	658418	658267	Y	COX19	NA	NA	NA	NA	NA	PDGFA	100222	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	1013884	1014155	1013955	Y	NA	ADAP1,COX19,CYP2W1	NA	NA	NA	NA	COX19	649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr7	1017371	1017727	1017512	Y	PRKAR1B,PRKAR1B,GET4,CYP2W1	ADAP1,COX19,CYP2W1	NA	NA	NA	NA	CYP2W1	3108	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.5098922340581
chr7	1198505	1198792	1198744	Y	NA	C7orf50,AC091729.9,ZFAND2A	NA	NA	NA	NA	ZFAND2A	110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.47300227888368
chr7	1500451	1500958	1500750	Y	NA	MICALL2,AC102953.4,INTS1	NA	NA	NA	NA	AC102953.4	2878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268384925942314
chr7	1501148	1501314	1501260	Y	NA	MICALL2,AC102953.4,INTS1	NA	NA	NA	NA	AC102953.4	3575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	1546091	1546367	1546260	Y	NA	MICALL2,AC102953.4,INTS1,MAFK	NA	NA	NA	NA	INTS1	2602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	1560213	1560697	1560426	Y	C7orf50,TMEM184A,PSMG3,PSMG3,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	7653	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.258031381975417
chr7	1571273	1571500	1571366	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	2923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr7	1571848	1572026	1571934	Y	ZFAND2A,TMEM184A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	3498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr7	1572262	1572844	1572636	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	3912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.138712356175777
chr7	1573524	1573718	1573598	Y	ZFAND2A,MAFK	INTS1,MAFK,TMEM184A,PSMG3-AS1,PSMG3	NA	NA	NA	NA	MAFK	5174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	1659138	1659514	1659188	Y	NA	NA	NA	NA	NA	NA	PSMG3	50497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	1978042	1978502	1978293	Y	NA	NA	NA	NA	NA	NA	AC074389.9	198115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	2063741	2064015	2063879	Y	NA	NA	NA	NA	NA	NA	MAD1L1	206863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	2101889	2102279	2102085	Y	ELFN1	NA	NA	NA	NA	NA	MAD1L1	168599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	2143904	2144149	2144041	Y	LFNG	NA	NA	NA	NA	NA	MAD1L1	126729	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	2150639	2150902	2150796	Y	SNX8,LFNG	NA	NA	NA	NA	NA	MAD1L1	119976	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.63611413410955
chr7	2276986	2277172	2277058	Y	LFNG,SNX8	MAD1L1,FTSJ2,NUDT1	NA	NA	NA	NA	FTSJ2	2668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2301325	2301581	2301357	Y	LFNG,SNX8	MAD1L1,FTSJ2,NUDT1	NA	NA	NA	NA	NUDT1	21468	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2366728	2366801	2366785	Y	SNX8,LFNG	EIF3B,SNX8	FTSJ2,NUDT1,SNX8,EIF3B,KIAA1908,MAD1L1,MAFK,TFAMP1,PSMG3,TMEM184A,ELFN1	IMR90	Hi-C	24141950	EIF3B	24920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2569854	2570215	2570046	Y	LFNG,LFNG,IQCE,BRAT1	LFNG,BRAT1,IQCE	NA	NA	NA	NA	LFNG	19691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	2570337	2570495	2570402	Y	LFNG,BRAT1	LFNG,BRAT1,IQCE	NA	NA	NA	NA	LFNG	20174	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2657383	2657705	2657445	Y	IQCE,TTYH3	TTYH3	NA	NA	NA	NA	TTYH3	11880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2661791	2662128	2661981	Y	NA	TTYH3	AMZ1,TTYH3	IMR90	Hi-C	24141950	TTYH3	7457	CAGE	HepG2 ENCODE	hg19	FANTOM5	7.46728607729399
chr7	2662902	2663119	2663008	Y	NA	TTYH3	AMZ1,TTYH3	IMR90	Hi-C	24141950	TTYH3	6466	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.893081643298381
chr7	2667919	2668210	2667992	Y	NA	TTYH3,AMZ1	NA	NA	NA	NA	TTYH3	1375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.377350407775058
chr7	2672306	2673216	2673099	Y	LFNG,TTYH3	TTYH3,AMZ1	NA	NA	NA	NA	TTYH3	2721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	2676969	2677494	2677317	Y	LFNG	TTYH3,AMZ1	NA	NA	NA	NA	TTYH3	7384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	2681143	2681305	2681209	Y	SNX8,LFNG,LFNG,TTYH3	TTYH3,AMZ1	NA	NA	NA	NA	TTYH3	11558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	2733557	2733913	2733713	Y	SNX8,LFNG,LFNG,GNA12	AMZ1	NA	NA	NA	NA	AMZ1	16401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	2744937	2745164	2745051	Y	NA	AMZ1	NA	NA	NA	NA	AMZ1	27781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	2812534	2812892	2812775	Y	SNX8,LFNG,LFNG,GNA12	NA	NA	NA	NA	NA	AC006028.11	60363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	2827851	2827916	2827884	Y	NA	AC006028.11	NA	NA	NA	NA	AC006028.11	45339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	2842322	2842519	2842421	Y	NA	AC006028.11,GNA12	NA	NA	NA	NA	AC006028.11	30736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.489275444757828
chr7	2843425	2843709	2843567	Y	NA	AC006028.11,GNA12	NA	NA	NA	NA	AC006028.11	29546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	2860040	2860490	2860319	Y	LFNG,LFNG,GNA12	AC006028.11,GNA12	NA	NA	NA	NA	AC006028.11	12765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	2903227	2903785	2903462	Y	LFNG,LFNG,TTYH3,GNA12	AC006028.11,GNA12	GNA12	MCF7	ChIA-PET	22265404	GNA12	21269	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.08340213317108
chr7	4133088	4133284	4133186	Y	NA	NA	NA	NA	NA	NA	FOXK1	548104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	4681329	4681565	4681443	Y	MMD2	NA	SDK1,FOXK1	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	FOXK1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.469059471389108
chr7	4723112	4724257	4723950	Y	NA	FOXK1	NA	NA	NA	NA	FOXK1	41724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	4747693	4747769	4747737	Y	NA	NA	NA	NA	NA	NA	FOXK1	66305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	4764796	4765177	4765030	Y	KIAA0415	NA	NA	NA	NA	NA	FOXK1	83408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr7	4765280	4765661	4765569	Y	NA	NA	NA	NA	NA	NA	FOXK1	83892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr7	4778448	4778853	4778548	Y	KIAA0415	NA	NA	NA	NA	NA	FOXK1	97060	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233872601112125
chr7	4784652	4785031	4784763	Y	NA	NA	NA	NA	NA	NA	FOXK1	103264	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr7	5388439	5388783	5388611	Y	NA	NA	NA	NA	NA	NA	TNRC18	74262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	5419074	5419498	5419154	Y	NA	TNRC18	NA	NA	NA	NA	TNRC18	43547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	5458136	5458686	5458477	Y	FBXL18,TNRC18	TNRC18	NA	NA	NA	NA	TNRC18	4359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	5469639	5470034	5469987	Y	NA	TNRC18	TNRC18,FBXL18,ACTB	MCF7,K562	ChIA-PET	22265404	TNRC18	6594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chr7	5471668	5472052	5471860	Y	NA	TNRC18	WIPI2,SLC29A4,TNRC18,RNF216	IMR90	Hi-C	24141950	TNRC18	8623	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	5492663	5492953	5492758	Y	MMD2,SLC29A4	TNRC18	TNRC18	MCF7	ChIA-PET	22265404	TNRC18	29618	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	5571351	5571818	5571666	Y	WIPI2,ACTB	FBXL18,ACTB	NA	NA	NA	NA	FBXL18	19922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.628970541670951
chr7	5571967	5572766	5572739	Y	RBAK,RBAK	FBXL18,ACTB	NA	NA	NA	NA	FBXL18	20538	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.15374156360352
chr7	5594554	5594977	5594837	Y	WIPI2	FBXL18,ACTB,FSCN1	RNF216,FBXL18,TNRC18	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ACTB	6438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.738267040324006
chr7	5595490	5596184	5595557	Y	CCZ1,ACTB	FBXL18,ACTB,FSCN1	RNF216,FBXL18,TNRC18	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	ACTB	5231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.486807004172875
chr7	5609541	5610012	5609880	Y	SLC29A4,TNRC18,FBXL18,FSCN1	ACTB,FSCN1	RNF216,FSCN1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ACTB	8126	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr7	5635420	5636238	5635862	Y	NA	ACTB,FSCN1	NA	NA	NA	NA	FSCN1	4981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	5710055	5710429	5710241	Y	WIPI2,WIPI2,TNRC18,FBXL18,USP42,RNF216,EIF2AK1	NA	NA	NA	NA	NA	FSCN1	79616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	5731889	5732558	5731976	Y	CCZ1	NA	NA	NA	NA	NA	RNF216	86812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	6049655	6049813	6049700	Y	NA	PMS2,AIMP2,EIF2AK1	NA	NA	NA	NA	AIMP2	2779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	6145406	6145878	6145682	Y	USP42	EIF2AK1,AC004895.4,USP42	NA	NA	NA	NA	USP42	2891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr7	6425136	6425343	6425226	Y	CCZ1,USP42	RAC1	NA	NA	NA	NA	RAC1	12982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	6677371	6677641	6677424	Y	DAGLB,ZNF12,C7orf26	C7orf26,ZNF316	NA	NA	NA	NA	ZNF316	2418	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr7	6682292	6682670	6682512	Y	C7orf26	ZNF316	NA	NA	NA	NA	ZNF316	7339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr7	6741580	6741996	6741754	Y	C7orf26,ZNF853,C7orf28B,ZNF12	ZNF12,PMS2CL	NA	NA	NA	NA	ZNF12	2558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr7	7197591	7197789	7197703	Y	C1GALT1	C1GALT1	COL28A1	IMR90	Hi-C	24141950	C1GALT1	3026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	7216835	7216977	7216903	Y	NA	C1GALT1	C1GALT1	MCF7	ChIA-PET	22265404	C1GALT1	22270	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.01881191717755
chr7	7346319	7346471	7346390	Y	NA	NA	NA	NA	NA	NA	C1GALT1	151754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	7608686	7608956	7608841	Y	MIOS	MIOS	NA	NA	NA	NA	MIOS	4183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	7759003	7759285	7759121	Y	NA	RPA3,RPL23AP51	NA	NA	NA	NA	RPA3	2765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	11089099	11089199	11089149	Y	NA	NA	NA	NA	NA	NA	PHF14	77600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	11860647	11861050	11860853	Y	THSD7A	NA	NA	NA	NA	NA	TMEM106B	387817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	12755276	12755712	12755432	Y	VWDE,ARL4A	ARL4A	NA	NA	NA	NA	ARL4A	30795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	13057101	13057487	13057331	Y	NA	NA	ARL4A	IMR90	Hi-C	24141950	ARL4A	332620	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr7	13368007	13368354	13368181	Y	NA	NA	NA	NA	NA	NA	ARL4A	643526	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	17029591	17029925	17029620	Y	NA	NA	AHR	IMR90	Hi-C	24141950	AGR2	158534	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.354505896076623
chr7	17139132	17139382	17139242	Y	NA	NA	AHR	IMR90	Hi-C	24141950	AHR	196864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.549260819616166
chr7	17170041	17170200	17170099	Y	AHR	NA	NA	NA	NA	NA	AHR	166046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr7	17336947	17337086	17336970	Y	NA	AHR	NA	NA	NA	NA	AC003075.4	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	19746950	19747169	19747121	Y	NA	TWISTNB	NA	NA	NA	NA	TWISTNB	240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	21260621	21260992	21260836	Y	NA	NA	NA	NA	NA	NA	SP4	204660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	22011633	22011901	22011770	Y	NA	CDCA7L	NA	NA	NA	NA	CDCA7L	27931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	22130088	22130317	22130208	Y	NA	NA	RAPGEF5	IMR90	Hi-C	24141950	CDCA7L	146386	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr7	22162881	22162961	22162899	Y	NA	NA	NA	NA	NA	NA	CDCA7L	179179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	22253669	22254026	22253848	Y	NA	NA	NA	NA	NA	NA	CDCA7L	269967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	22386592	22386681	22386637	Y	NA	NA	NA	NA	NA	NA	EEF1A1P6	162937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	22398962	22399217	22399216	Y	NA	NA	NA	NA	NA	NA	EEF1A1P6	150401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.139534999168361
chr7	22484182	22484549	22484368	Y	NA	NA	NA	NA	NA	NA	EEF1A1P6	65069	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.360585615728637
chr7	22861021	22861212	22861181	Y	NA	TOMM7	NA	NA	NA	NA	TOMM7	551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	22894313	22894860	22894668	Y	STEAP1B,TOMM7	TOMM7	NA	NA	NA	NA	TOMM7	33843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr7	23229571	23229876	23229614	Y	NA	NUPL2	NA	NA	NA	NA	NUPL2	10125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr7	23348040	23348443	23348292	Y	KLHL7,KLHL7,NUPL2,IGF2BP3	NA	NA	NA	NA	NA	NUPL2	128594	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr7	23501559	23501943	23501874	Y	NUPL2,IGF2BP3	IGF2BP3,AC079780.3	NA	NA	NA	NA	IGF2BP3	6143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	23504984	23505316	23505313	Y	NA	IGF2BP3,AC079780.3	NA	NA	NA	NA	IGF2BP3	2770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr7	23510676	23511223	23510889	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3,AC079780.3	NA	NA	NA	NA	IGF2BP3	2590	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.92701255492998
chr7	23513815	23514383	23514045	Y	NUPL2,C7orf30,IGF2BP3	IGF2BP3,AC079780.3	MALSU1	K562	ChIA-PET	22265404	AC079780.3	3989	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.02562398118863
chr7	24626460	24626850	24626473	Y	NA	MPP6	NA	NA	NA	NA	MPP6	15573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	24813861	24813988	24813926	Y	OSBPL3	DFNA5	DFNA5,OSBPL3	IMR90	Hi-C	24141950	DFNA5	6617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	24882463	24882674	24882596	Y	NA	NA	NA	NA	NA	NA	DFNA5	75219	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr7	24924727	24925102	24925076	Y	NA	NA	NA	NA	NA	NA	OSBPL3	94151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	24947142	24947425	24947387	Y	NA	NA	NA	NA	NA	NA	OSBPL3	71828	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	24963944	24964392	24964187	Y	NA	NA	NA	NA	NA	NA	OSBPL3	54861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	25002827	25003181	25002973	Y	C7orf31,OSBPL3	OSBPL3	NA	NA	NA	NA	OSBPL3	16072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	25009429	25009748	25009721	Y	NA	OSBPL3	NA	NA	NA	NA	OSBPL3	9505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr7	25064852	25065012	25064919	Y	NA	OSBPL3	OSBPL3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	OSBPL3	45599	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.14298618049066
chr7	25990725	25991211	25991018	Y	NA	NA	NA	NA	NA	NA	NFE2L3	198649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.82356536746573
chr7	25992296	25992472	25992423	Y	NA	NA	NA	NA	NA	NA	NFE2L3	197388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.190812116044971
chr7	26140883	26141586	26141235	Y	SNX10,SNX10,SNX10,HNRNPA2B1	NFE2L3	NA	NA	NA	NA	NFE2L3	48274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.370939159695534
chr7	26333342	26333901	26333652	Y	SNX10,SNX10,CBX3,SNX10	AC010677.5,SNX10	NA	NA	NA	NA	SNX10	3801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	26344916	26345429	26345290	Y	SNX10,SNX10,CBX3,SNX10	AC010677.5,SNX10	NA	NA	NA	NA	SNX10	15375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr7	26346471	26347292	26346975	Y	CBX3,SNX10,SNX10,SNX10	AC010677.5,SNX10	NA	NA	NA	NA	SNX10	16930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	26354150	26354315	26354211	Y	CBX3,SNX10,SNX10,SNX10	AC010677.5,SNX10	NA	NA	NA	NA	SNX10	24609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	26437040	26437353	26437115	Y	NA	NA	LOC441204	MCF7,K562	ChIA-PET	22265404	SNX10	107499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	26815721	26816027	26815980	Y	SNX10,SNX10,SKAP2	NA	NA	NA	NA	NA	C7orf71	140231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	27152655	27152825	27152741	Y	NA	HOTAIRM1,HOXA1,HOXA-AS2,HOXA4,HOXA5,HOXA6,HOXA7	NA	NA	NA	NA	HOXA-AS2	7259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	27156534	27156699	27156617	Y	HOXA3	HOTAIRM1,HOXA1,HOXA-AS2,HOXA4,HOXA5,HOXA6,HOXA7	NA	NA	NA	NA	HOXA-AS2	11138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	27531639	27532015	27531830	Y	NA	EIF4HP1	NA	NA	NA	NA	EIF4HP1	35171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	27573880	27573985	27573933	Y	NA	NA	NA	NA	NA	NA	EIF4HP1	77412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	28240290	28240601	28240358	Y	NA	NA	NA	NA	NA	NA	CREB5	96339	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	28733136	28733327	28733267	Y	NA	NA	NA	NA	NA	NA	CREB5	396196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	29042480	29042583	29042532	Y	NA	NA	NA	NA	NA	NA	CHN2	117307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	29115131	29115317	29115226	Y	NA	CHN2	NA	NA	NA	NA	CHN2	44573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	29163209	29163338	29163275	Y	NA	CHN2	NA	NA	NA	NA	CHN2	3319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr7	29359361	29359579	29359450	Y	CHN2,TRIL,CHN2	NA	NA	NA	NA	NA	CPVL	126294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	29486224	29486601	29486413	Y	CHN2	NA	NA	NA	NA	NA	AC007255.8	114685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	29500841	29501198	29501020	Y	NA	NA	NA	NA	NA	NA	AC007255.8	100088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	29534563	29534631	29534599	Y	WIPF3	NA	NA	NA	NA	NA	AC007255.8	66655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr7	29951912	29952143	29952027	Y	ZNRF2,C7orf41	NA	NA	NA	NA	NA	AC007285.6	74073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	30206134	30206379	30206282	Y	ZNRF2	NA	NA	NA	NA	NA	ZNRF2	115544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	30278478	30278832	30278618	Y	NA	ZNRF2	NA	NA	NA	NA	ZNRF2	43091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	30500037	30500161	30500099	Y	NA	NOD1	NA	NA	NA	NA	NOD1	16239	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	30636092	30636194	30636111	Y	NA	GGCT,GARS	NA	NA	NA	NA	GARS	3795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	30658764	30658962	30658863	Y	NA	GARS	NA	NA	NA	NA	GARS	26467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	32531348	32531711	32531530	Y	PDE1C,PDE1C,PDE1C	LSM5,AVL9	NA	NA	NA	NA	LSM5	1184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	32546004	32546038	32546035	Y	NA	LSM5,AVL9	NA	NA	NA	NA	AVL9	12966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	32929600	32929824	32929751	Y	NA	KBTBD2	NA	NA	NA	NA	KBTBD2	1919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	33079333	33079582	33079400	Y	NA	NA	NA	NA	NA	NA	RP9	67431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	33316298	33316594	33316442	Y	NA	NA	NA	NA	NA	NA	BBS9	149442	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	34429750	34429913	34429832	Y	NA	NA	NA	NA	NA	NA	BBS9	1262894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr7	34795612	34795823	34795780	Y	NA	NA	NA	NA	NA	NA	HERPUD2	937358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	35075861	35076697	35076367	Y	NA	NA	NA	NA	NA	NA	HERPUD2	656484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.607440299137374
chr7	36238635	36238884	36238775	Y	EEPD1	EEPD1	NA	NA	NA	NA	EEPD1	47877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	36301055	36301385	36301112	Y	AOAH,SEPT7,EEPD1	NA	NA	NA	NA	NA	EEPD1	110297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	36323214	36323703	36323368	Y	AOAH,EEPD1	NA	NA	NA	NA	NA	ANLN	103712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	36331807	36331936	36331811	Y	NA	NA	NA	NA	NA	NA	ANLN	95479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.224010171710302
chr7	36480174	36480717	36480189	Y	NA	NA	NA	NA	NA	NA	KIAA0895	52440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	36843340	36843728	36843600	Y	ELMO1	NPM1P18	NA	NA	NA	NA	NPM1P18	12836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	36903591	36903813	36903689	Y	AOAH,ELMO1	NPM1P18	NA	NA	NA	NA	NPM1P18	47027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	37023926	37024076	37024004	Y	AOAH,ELMO1,ELMO1,ELMO1	NA	NA	NA	NA	NA	NPM1P18	167362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.284327074996151
chr7	37071492	37071821	37071657	Y	AOAH,ELMO1,ELMO1	NA	NA	NA	NA	NA	NPM1P18	214928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr7	38354761	38355072	38354915	Y	TARP	AC006033.22	NA	NA	NA	NA	AC006033.22	5777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	38376350	38376385	38376368	Y	NA	AC006033.22	LOC100506776	K562	ChIA-PET	22265404	AC006033.22	27366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	39660879	39661112	39661042	Y	NA	NA	NA	NA	NA	NA	RALA	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	39661364	39661771	39661496	Y	NA	RALA	NA	NA	NA	NA	RALA	282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	39661947	39662014	39661981	Y	NA	RALA	NA	NA	NA	NA	RALA	865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	40088776	40089159	40088837	Y	NA	NA	NA	NA	NA	NA	CDK13	101140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr7	40138099	40138142	40138120	Y	NA	NA	NA	NA	NA	NA	CDK13	150463	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	40580986	40581112	40581049	Y	NA	NA	NA	NA	NA	NA	CDK13	593350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	40706026	40706047	40706035	Y	NA	NA	NA	NA	NA	NA	CDK13	718390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	40756959	40757193	40757114	Y	NA	NA	NA	NA	NA	NA	CDK13	769323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	42145452	42145673	42145563	Y	NA	NA	NA	NA	NA	NA	C7orf25	804231	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	42927750	42928726	42928340	Y	NA	C7orf25,MRPL32,PSMA2	NA	NA	NA	NA	C7orf25	21178	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.59765900178478
chr7	42954351	42954549	42954430	Y	NA	C7orf25,MRPL32,PSMA2	C7orf25	K562	ChIA-PET	22265404	C7orf25	4447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	43625293	43625372	43625313	Y	URGCP,STK17A	STK17A	NA	NA	NA	NA	STK17A	4936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	43626451	43626626	43626528	Y	URGCP,STK17A	STK17A	C7orf44	IMR90	Hi-C	24141950	STK17A	6094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	43654812	43655175	43654945	Y	POLM,DBNL,STK17A,URGCP	STK17A	NA	NA	NA	NA	STK17A	34455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr7	43657815	43658085	43657951	Y	POLM,STK17A,URGCP	STK17A	NA	NA	NA	NA	STK17A	37458	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	43658377	43658532	43658408	Y	POLM,STK17A,URGCP	STK17A	NA	NA	NA	NA	STK17A	38020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	43659947	43660692	43660336	Y	DBNL,STK17A	STK17A	NA	NA	NA	NA	STK17A	39590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	43670120	43670185	43670135	Y	POLM,DBNL,STK17A	STK17A	NA	NA	NA	NA	STK17A	49763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr7	43676905	43677264	43677045	Y	POLM,DBNL,STK17A,URGCP	NA	NA	NA	NA	NA	STK17A	56548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	43683947	43684262	43684105	Y	POLM,DBNL,STK17A	NA	NA	NA	NA	NA	STK17A	63590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	43714128	43714419	43714274	Y	NA	NA	NA	NA	NA	NA	BLVRA	81860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	43740255	43740653	43740556	Y	GCK	NA	NA	NA	NA	NA	BLVRA	55626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr7	43801940	43802267	43802061	Y	NA	BLVRA	NA	NA	NA	NA	BLVRA	5661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	43959007	43959429	43959215	Y	NA	URGCP,UBE2D4	NA	NA	NA	NA	URGCP	4581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.195577566532127
chr7	43996825	43996925	43996859	Y	NA	URGCP,UBE2D4	NA	NA	NA	NA	UBE2D4	32788	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	44127636	44127736	44127679	Y	YKT6,AEBP1	DBNL,POLM,POLD2	PGAM2,POLM,AEBP1,POLD2,GCK,YKT6,CAMK2B	IMR90	Hi-C	24141950	POLM	7497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	44657226	44657498	44657343	Y	PURB,MYO1G,OGDH	DDX56,TMED4,OGDH	NA	NA	NA	NA	OGDH	13055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	44678622	44679047	44678972	Y	ZMIZ2,ZMIZ2,PURB,MYO1G,OGDH	OGDH	NA	NA	NA	NA	OGDH	34451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	45495394	45495553	45495539	Y	NA	NA	NA	NA	NA	NA	ADCY1	116186	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.3207264272127
chr7	45928899	45929352	45929108	Y	IGFBP1	IGFBP1,IGFBP3	NA	NA	NA	NA	IGFBP1	2943	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	47390589	47390737	47390670	Y	NA	NA	NA	NA	NA	NA	TNS3	229419	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	47475545	47475747	47475668	Y	NA	NA	NA	NA	NA	NA	TNS3	144409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	47496897	47497228	47497063	Y	NA	NA	NA	NA	NA	NA	TNS3	122928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	47510195	47510559	47510444	Y	NA	NA	NA	NA	NA	NA	TNS3	109597	CAGE	HepG2 ENCODE	hg19	FANTOM5	7.93058551291341
chr7	47514732	47515208	47514929	Y	TNS3	NA	NA	NA	NA	NA	TNS3	104948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.515571137778561
chr7	47517591	47517776	47517700	Y	NA	NA	NA	NA	NA	NA	TNS3	102380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	47534455	47534849	47534744	Y	HUS1	NA	NA	NA	NA	NA	TNS3	85307	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	47548092	47548390	47548234	Y	HUS1	NA	NA	NA	NA	NA	TNS3	71766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	47579966	47580265	47580181	Y	NA	TNS3	NA	NA	NA	NA	TNS3	39891	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.06243548227473
chr7	47611156	47611689	47611507	Y	C7orf69,TNS3	TNS3	NA	NA	NA	NA	TNS3	8467	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	47612587	47612873	47612749	Y	NA	TNS3	NA	NA	NA	NA	TNS3	7283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	47620098	47620164	47620135	Y	TNS3	NA	NA	NA	NA	NA	TNS3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr7	47641076	47641289	47641172	Y	NA	TNS3	TNS3,C7orf65,LINC00525,PKD1L1,C7orf69	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNS3	20920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	47644474	47644665	47644612	Y	NA	TNS3	TNS3,C7orf65,C7orf69,PKD1L1,LINC00525	IMR90	Hi-C	24141950	TNS3	24318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	47675013	47675155	47675094	Y	TNS3	NA	TNS3,C7orf69,PKD1L1,C7orf65,LINC00525	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TNS3	54857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.230421419789826
chr7	47686221	47686609	47686415	Y	NA	NA	TNS3,PKD1L1,LINC00525,C7orf69	IMR90	Hi-C	24141950	TNS3	66065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	47826128	47826596	47826342	Y	NA	NA	NA	NA	NA	NA	HUS1	190582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.532004401397471
chr7	50237139	50237380	50237343	Y	NA	NA	COBL	IMR90	Hi-C	24141950	FIGNL1	278708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr7	50246074	50246259	50246194	Y	IKZF1	NA	COBL,IKZF1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	FIGNL1	269829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	50481345	50481573	50481463	Y	NA	FIGNL1	NA	NA	NA	NA	FIGNL1	34515	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	50666851	50666964	50666921	Y	NA	DDC	NA	NA	NA	NA	DDC	35697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	50682806	50683075	50682899	Y	DDC	NA	NA	NA	NA	NA	DDC	51652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr7	50695953	50696288	50696121	Y	NA	NA	NA	NA	NA	NA	DDC	64799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	50889237	50889584	50889351	Y	NA	GRB10	COBL,GRB10	IMR90	Hi-C	24141950	GRB10	30078	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	51382954	51383359	51383079	Y	COBL	COBL	NA	NA	NA	NA	COBL	439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	55134555	55134962	55134733	Y	NA	EGFR	NA	NA	NA	NA	EGFR	49841	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	55146809	55147410	55146997	Y	NA	NA	NA	NA	NA	NA	EGFR	62095	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.82198988059181
chr7	55200352	55201043	55200686	Y	SEC61G,EGFR	NA	NA	NA	NA	NA	EGFR-AS1	53584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	55201472	55201858	55201601	Y	SEC61G	NA	NA	NA	NA	NA	EGFR-AS1	52769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr7	55245390	55245594	55245555	Y	NA	EGFR-AS1	NA	NA	NA	NA	EGFR-AS1	9033	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.448843498020388
chr7	55253994	55254266	55254079	Y	SEC61G	EGFR-AS1	NA	NA	NA	NA	EGFR-AS1	361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	55322570	55322956	55322611	Y	EGFR	CALM1P2	EGFR,SEC61G	IMR90	Hi-C	24141950	CALM1P2	2993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr7	55436942	55437154	55437048	Y	NA	LANCL2	NA	NA	NA	NA	LANCL2	5801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	55529793	55530311	55530129	Y	ZNF713,VOPP1	NA	NA	NA	NA	NA	LANCL2	98652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.263619475455158
chr7	55541787	55541962	55541880	Y	NA	NA	NA	NA	NA	NA	VOPP1	96719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	55542922	55542955	55542935	Y	VOPP1	NA	NA	NA	NA	NA	VOPP1	95726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	55572828	55572957	55572867	Y	NA	NA	NA	NA	NA	NA	VOPP1	65724	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	55575892	55576055	55575968	Y	NA	NA	NA	NA	NA	NA	VOPP1	62626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	55576461	55576688	55576528	Y	VOPP1	NA	NA	NA	NA	NA	VOPP1	61993	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	55603072	55603362	55603151	Y	VOPP1	VOPP1	NA	NA	NA	NA	VOPP1	35319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	55637465	55637727	55637601	Y	VOPP1	VOPP1	NA	NA	NA	NA	VOPP1	954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	55638699	55638887	55638779	Y	VOPP1	VOPP1	NA	NA	NA	NA	VOPP1	18	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	56168682	56168929	56168809	Y	ZNF713	SUMF2,CHCHD2	NA	NA	NA	NA	CHCHD2	3340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr7	56173322	56173423	56173410	Y	NA	SUMF2,CHCHD2	NA	NA	NA	NA	CHCHD2	1053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr7	56243524	56243790	56243559	Y	LOC389493	NA	NA	NA	NA	NA	CHCHD2	71255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr7	56551603	56551711	56551666	Y	LOC389493	NA	NA	NA	NA	NA	CHCHD2	379334	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	56606357	56606502	56606382	Y	LOC389493	NA	NA	NA	NA	NA	CHCHD2	434088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	57639323	57639702	57639567	Y	ZNF479,ZNF716	NA	NA	NA	NA	NA	CHCHD2	1467054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	57706434	57706786	57706770	Y	ZNF716	NA	NA	NA	NA	NA	CHCHD2	1534165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	63924105	63924304	63924148	Y	NA	HNRNPCP7	NA	NA	NA	NA	HNRNPCP7	34899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	64196878	64197130	64197096	Y	NA	NA	NA	NA	NA	NA	ZNF138	55636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	66040596	66040908	66040816	Y	NA	NA	NA	NA	NA	NA	KCTD7	50960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	66152523	66152575	66152558	Y	RABGEF1,KCTD7	RP4-756H11.3,RABGEF1	KCTD7,LOC493754,RABGEF1	IMR90	Hi-C	24141950	RABGEF1	7372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	66159622	66159870	66159746	Y	NA	RP4-756H11.3,RABGEF1	KCTD7,LOC493754,RABGEF1	IMR90	Hi-C	24141950	RABGEF1	14471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	66184244	66184571	66184390	Y	NA	RABGEF1	LOC493754,RABGEF1,LOC729156	IMR90	Hi-C	24141950	RABGEF1	39093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr7	66783772	66783944	66783858	Y	NA	STAG3L4,PMS2P4	NA	NA	NA	NA	PMS2P4	17878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	68797127	68797219	68797173	Y	NA	NA	NA	NA	NA	NA	RP5-859M6.1	693342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	72756043	72756175	72756109	Y	TYW1B,BCL7B	NSUN5	NA	NA	NA	NA	NSUN5	35179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	72929530	72929887	72929777	Y	NA	BAZ1B,BCL7B	NA	NA	NA	NA	BAZ1B	4721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	72934537	72934921	72934642	Y	NA	BCL7B	NA	NA	NA	NA	BAZ1B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	73015142	73015298	73015257	Y	NA	BCL7B,TBL2,MLXIPL	NA	NA	NA	NA	MLXIPL	21575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	73037168	73037552	73037436	Y	MLXIPL	TBL2,MLXIPL	NA	NA	NA	NA	MLXIPL	295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.457882772822427
chr7	73062013	73062614	73062579	Y	BAZ1B,ABHD11,MLXIPL,STX1A	MLXIPL,WBSCR22,DNAJC30	MLXIPL,MIR4284,WBSCR22,STX1A	IMR90	Hi-C	24141950	MLXIPL	25140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.606126029972516
chr7	73078661	73079023	73078813	Y	NA	MLXIPL,WBSCR22,DNAJC30	NA	NA	NA	NA	WBSCR22	16332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr7	73153813	73154099	73154081	Y	FZD9,STX1A,ABHD11,CLDN4,CLDN3	STX1A,ABHD11,CLDN3	NA	NA	NA	NA	ABHD11	2616	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	73265870	73266203	73266092	Y	BCL7B	WBSCR27	NA	NA	NA	NA	WBSCR27	11005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	73866647	73867033	73866768	Y	LAT2	GTF2IRD1	NA	NA	NA	NA	GTF2IRD1	527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.211519715585964
chr7	73869161	73869472	73869346	Y	NA	GTF2IRD1	NA	NA	NA	NA	GTF2IRD1	3041	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	73897037	73897256	73897156	Y	NA	GTF2IRD1	NA	NA	NA	NA	GTF2IRD1	30917	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	73989785	73989913	73989858	Y	NA	NA	NA	NA	NA	NA	GTF2I	80081	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	73994648	73994954	73994780	Y	NA	NA	NA	NA	NA	NA	GTF2I	75040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	74050043	74050194	74050049	Y	GTF2IRD2B	GTF2I	GTF2IRD1,GTF2I	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	GTF2I	19800	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr7	74064444	74064957	74064539	Y	GTF2IRD2B,LAT2	GTF2I	NA	NA	NA	NA	GTF2I	5037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr7	74074203	74074528	74074318	Y	LAT2,GTF2I	GTF2I	NA	NA	NA	NA	GTF2I	4209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	74138320	74138615	74138328	Y	NA	NA	NA	NA	NA	NA	GTF2I	68326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	75247024	75247489	75247190	Y	POR	NA	NA	NA	NA	NA	PMS2P3	91546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	75253450	75253956	75253637	Y	POR	NA	NA	NA	NA	NA	PMS2P3	97972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	75266605	75266883	75266780	Y	CCL26,HIP1	NA	NA	NA	NA	NA	HIP1	99397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	75267820	75268040	75267850	Y	POR	NA	NA	NA	NA	NA	HIP1	98240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	75268782	75269322	75269061	Y	NA	NA	NA	NA	NA	NA	HIP1	96958	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	75465283	75465439	75465360	Y	MDH2	RHBDD2	STYXL1,MDH2,HIP1,CCL26,TMEM120A,POR	IMR90	Hi-C	24141950	RHBDD2	4481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.146928987985232
chr7	75535277	75535559	75535332	Y	NA	POR	NA	NA	NA	NA	POR	8759	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.182595484235515
chr7	75546128	75546229	75546156	Y	NA	POR	STYXL1	IMR90	Hi-C	24141950	POR	19610	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr7	75795833	75796053	75795969	Y	RHBDD2,POR	NA	SRRM3,HSPB1,MDH2,STYXL1	IMR90	Hi-C	24141950	AC005077.12	59736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.371762314295318
chr7	75923846	75924306	75924205	Y	HSPB1	HSPB1	NA	NA	NA	NA	HSPB1	5555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	75940045	75940212	75940167	Y	NA	HSPB1,YWHAG	NA	NA	NA	NA	HSPB1	10184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	75947305	75947626	75947472	Y	RHBDD2,SRRM3	HSPB1,YWHAG	NA	NA	NA	NA	HSPB1	17444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.660854328171425
chr7	75948116	75948327	75948250	Y	RHBDD2	HSPB1,YWHAG	NA	NA	NA	NA	HSPB1	18255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr7	76009173	76009680	76009431	Y	POR	YWHAG,SRCRB4D	NA	NA	NA	NA	YWHAG	22825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr7	76627484	76628238	76628092	Y	NA	NA	NA	NA	NA	NA	FAM185BP	121195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	76874732	76875015	76874923	Y	NA	NA	NA	NA	NA	NA	FAM185BP	125299	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.930062408713521
chr7	77028776	77029116	77028943	Y	NA	NA	NA	NA	NA	NA	PTPN12	135476	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	77037268	77037509	77037460	Y	PTPN12,PTPN12,PION	NA	NA	NA	NA	NA	PTPN12	127083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	77038853	77039042	77038951	Y	PTPN12,PTPN12,PION	NA	NA	NA	NA	NA	PTPN12	125550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.491903983087542
chr7	77039475	77039927	77039691	Y	PTPN12,PTPN12,PION	NA	NA	NA	NA	NA	PTPN12	124665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.830959356282601
chr7	77042821	77043194	77043007	Y	NA	NA	NA	NA	NA	NA	PTPN12	121398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	77043308	77044194	77043379	Y	PTPN12,PTPN12,PION	NA	NA	NA	NA	NA	PTPN12	120398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	77177634	77177834	77177685	Y	FGL2,PION,PTPN12,PTPN12	PTPN12	NA	NA	NA	NA	PTPN12	13042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	77199277	77199536	77199359	Y	FGL2,PION,PTPN12,PTPN12	PTPN12	NA	NA	NA	NA	PTPN12	34685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	77201219	77201434	77201295	Y	FGL2,PION,PTPN12,PTPN12	PTPN12	NA	NA	NA	NA	PTPN12	36627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	77344619	77344946	77344783	Y	RSBN1L	RSBN1L-AS1,RSBN1L	NA	NA	NA	NA	RSBN1L	20859	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	77428722	77429286	77429067	Y	PION,PTPN12,RSBN1L,PHTF2,PHTF2	TMEM60,PHTF2	NA	NA	NA	NA	PHTF2	2600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	78207984	78208362	78208197	Y	NA	NA	NA	NA	NA	NA	PHTF2	781862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	78373810	78373889	78373850	Y	NA	NA	NA	NA	NA	NA	MAGI2-AS3	706309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	78412122	78412354	78412238	Y	NA	NA	NA	NA	NA	NA	MAGI2-AS3	667844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	78478233	78478612	78478564	Y	NA	NA	NA	NA	NA	NA	MAGI2-AS3	601586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	78613277	78613663	78613470	Y	MAGI2	NA	NA	NA	NA	NA	MAGI2-AS3	466535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	79050066	79050245	79050154	Y	MAGI2	MAGI2-AS3,MAGI2	NA	NA	NA	NA	MAGI2-AS3	29953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	79803492	79803786	79803598	Y	NA	GNAI1	NA	NA	NA	NA	GNAI1	42221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	79844591	79844960	79844776	Y	NA	NA	NA	NA	NA	NA	GNAI1	83320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	83688045	83688341	83688303	Y	NA	NA	NA	NA	NA	NA	SEMA3A	431699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	84613691	84613734	84613712	Y	NA	AC074183.4	NA	NA	NA	NA	AC074183.4	46130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	84717663	84717972	84717818	Y	NA	NA	NA	NA	NA	NA	AC074183.4	150102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	86948267	86948659	86948457	Y	CROT	TP53TG1,CROT	NA	NA	NA	NA	TP53TG1	24172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	89872159	89872438	89872340	Y	NA	C7orf63	NA	NA	NA	NA	C7orf63	50	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	91142488	91142502	91142497	Y	MTERF	NA	NA	NA	NA	NA	FZD1	250705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	91195125	91195302	91195221	Y	NA	NA	NA	NA	NA	NA	FZD1	303342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr7	91466585	91467314	91466893	Y	NA	MTERF	NA	NA	NA	NA	MTERF	40720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	92053507	92053858	92053662	Y	NA	GATAD1	GATAD1,ANKIB1	MCF7,IMR90,K562	ChIA-PET,Hi-C	22265404,24141950	GATAD1	20909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	92156983	92157235	92157087	Y	CDK6,CDK6,PEX1,FAM133B,C7orf64	PEX1,RBM48	NA	NA	NA	NA	RBM48	896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	92217809	92218139	92217980	Y	NA	FAM133B	NA	NA	NA	NA	FAM133B	101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	92260832	92261202	92261012	Y	NA	FAM133B	FAM133B	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM133B	43124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	92261439	92261837	92261823	Y	NA	FAM133B	FAM133B	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM133B	43731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	92261903	92262272	92262087	Y	CDK6,CDK6	FAM133B	FAM133B	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM133B	44195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	92263416	92263696	92263624	Y	SAMD9,CDK6	FAM133B	FAM133B	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM133B	45708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	92277080	92277232	92277129	Y	ANKIB1,GATAD1,CDK6	NA	NA	NA	NA	NA	FAM133B	59372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	92279692	92280069	92279965	Y	NA	NA	NA	NA	NA	NA	FAM133B	61984	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	92282305	92282698	92282463	Y	LRRD1,KRIT1,KRIT1,KRIT1,SAMD9L,SAMD9	NA	NA	NA	NA	NA	FAM133B	64597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	92324544	92325563	92325510	Y	NA	NA	FAM133B	IMR90	Hi-C	24141950	FAM133B	106836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.51343422562112
chr7	92340516	92340848	92340839	Y	CDK6	NA	NA	NA	NA	NA	FAM133B	122808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	92361219	92361296	92361260	Y	NA	NA	NA	NA	NA	NA	AC002454.1	102501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	92373404	92373742	92373580	Y	NA	NA	NA	NA	NA	NA	AC002454.1	90055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr7	92437286	92437617	92437517	Y	SAMD9	AC002454.1,CDK6	NA	NA	NA	NA	AC002454.1	26180	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	92439060	92439368	92439205	Y	PEX1,C7orf64,FAM133B,SAMD9	AC002454.1,CDK6	NA	NA	NA	NA	AC002454.1	24429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr7	92459714	92460134	92460069	Y	SAMD9	AC002454.1,CDK6	NA	NA	NA	NA	AC002454.1	3663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	92463754	92464079	92463922	Y	CDK6,CDK6	NA	NA	NA	NA	NA	AC002454.1,CDK6	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	94280099	94280356	94280228	Y	NA	SGCE,PEG10,RPS3AP25	NA	NA	NA	NA	SGCE	3165	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	94284072	94284624	94284343	Y	NA	SGCE,PEG10,RPS3AP25	NA	NA	NA	NA	PEG10	435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr7	94286949	94287416	94287082	Y	PPP1R9A,PPP1R9A,CASD1,PEG10,PEG10	SGCE,PEG10,RPS3AP25	NA	NA	NA	NA	PEG10	3312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.239952320764139
chr7	94557636	94557931	94557784	Y	PPP1R9A	PPP1R9A	NA	NA	NA	NA	PPP1R9A	23122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr7	94687971	94688075	94688023	Y	NA	RNU4-16P	NA	NA	NA	NA	RNU4-16P	37464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	94781809	94782176	94781990	Y	NA	NA	NA	NA	NA	NA	RNU4-16P	56270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	94799053	94799326	94799190	Y	PPP1R9A,PPP1R9A	NA	NA	NA	NA	NA	RNU4-16P	73514	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr7	95070230	95070589	95070236	Y	PON1,PON3,PDK4	PON1,PON3,PON2,ASB4	PON2	MCF7,K562	ChIA-PET	22265404	PON2	7720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr7	95129824	95130260	95130025	Y	ASB4	ASB4	NA	NA	NA	NA	ASB4	24068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	95137857	95138175	95137904	Y	ASB4	ASB4	NA	NA	NA	NA	ASB4	32101	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr7	95835254	95835261	95835258	Y	NA	NA	NA	NA	NA	NA	SLC25A13	114198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	95861904	95862185	95862172	Y	NA	NA	NA	NA	NA	NA	SLC25A13	87274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	95877265	95877280	95877275	Y	NA	NA	NA	NA	NA	NA	SLC25A13	72179	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	96600471	96600829	96600650	Y	NA	DLX6	NA	NA	NA	NA	DLX6	32031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	96642423	96642668	96642630	Y	NA	DLX6,DLX5	NA	NA	NA	NA	DLX6	9563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	96644857	96645287	96645147	Y	NA	DLX6,DLX5	NA	NA	NA	NA	DLX5	7122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	96646199	96646417	96646378	Y	DLX6,DLX5	DLX6,DLX5	NA	NA	NA	NA	DLX5	5992	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.62017249666291
chr7	96647181	96647459	96647313	Y	NA	DLX6,DLX5	NA	NA	NA	NA	DLX5	4950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	96748066	96748124	96748095	Y	NA	ACN9	NA	NA	NA	NA	ACN9	4164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	96905282	96905489	96905385	Y	NA	NA	NA	NA	NA	NA	ACN9	161380	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	97761073	97761517	97761248	Y	BRI3,LMTK2	LMTK2	NA	NA	NA	NA	LMTK2	26876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr7	97763037	97763356	97763224	Y	BRI3,LMTK2	LMTK2	NA	NA	NA	NA	LMTK2	28840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	97913424	97913987	97913861	Y	LMTK2,BRI3	TECPR1,BRI3	NA	NA	NA	NA	BRI3	33733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	97915595	97916070	97915699	Y	LMTK2,BRI3	TECPR1,BRI3	NA	NA	NA	NA	BRI3	35904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	97994295	97994325	97994312	Y	BAIAP2L1	RPS3AP26,BAIAP2L1	BRI3	IMR90	Hi-C	24141950	RPS3AP26	19571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126713014616512
chr7	98047040	98047207	98047124	Y	NA	RPS3AP26,BAIAP2L1	BAIAP2L1	K562	ChIA-PET	22265404	BAIAP2L1	18660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	98048213	98048460	98048408	Y	BRI3	RPS3AP26,BAIAP2L1	BAIAP2L1,TRRAP,TMEM130	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	BAIAP2L1	19833	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.02785119197959
chr7	98809347	98809684	98809536	Y	ZNF655,ZNF655,ZKSCAN5,PTCD1,PDAP1,FAM200A,CPSF4,BUD31,ATP5J2,ARPC1A,SMURF1,KPNA7	MYH16	SMURF1	IMR90	Hi-C	24141950	MYH16	24733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.829313558690234
chr7	98907896	98908116	98908033	Y	ZKSCAN5,LOC100289187	ARPC1A	ARPC1A	IMR90	Hi-C	24141950	ARPC1A	13405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	98970307	98970479	98970399	Y	PTCD1,CPSF4	ARPC1A,ARPC1B,BUD31,PDAP1	NA	NA	NA	NA	ARPC1B	435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.231735688954684
chr7	98973055	98973209	98973129	Y	ZNF655,ZNF655,ZNF394,ARPC1B	ARPC1B,BUD31,PDAP1	NA	NA	NA	NA	ARPC1B	3183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.267070656777457
chr7	98978423	98978863	98978747	Y	SMURF1,ZNF655,ZNF655,ZNF498,ZNF394,ZKSCAN5	ARPC1B,BUD31,PDAP1	NA	NA	NA	NA	ARPC1B	8551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr7	99000499	99000617	99000560	Y	NA	ARPC1B,BUD31,PDAP1,CPSF4	NA	NA	NA	NA	BUD31	3647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	99291105	99291222	99291169	Y	PTCD1,CYP3A43,CYP3A4,AZGP1,CYP3A5	CYP3A5,CYP3A7	NA	NA	NA	NA	CYP3A5	15484	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.836547449762342
chr7	99551289	99551506	99551376	Y	ZCWPW1,PILRA,MEPCE,C7orf59,ZNF655,ZNF655	TRIM4,AZGP1,AZGP1P1	NA	NA	NA	NA	AZGP1	20274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	99678619	99678725	99678657	Y	NA	ZSCAN21,ZNF3,COPS6,AP4M1,MCM7,CNPY4,TAF6,MBLAC1,RP11-506M12.1	NA	NA	NA	NA	ZNF3	448	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.261482563297716
chr7	99957855	99958254	99957887	Y	NA	PILRB,PMS2P1,PILRA	NA	NA	NA	NA	PILRA	4899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	99961767	99962035	99961969	Y	NA	PILRB,PMS2P1,PILRA	PILRA	IMR90	Hi-C	24141950	PILRA	1118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	99966641	99967146	99966944	Y	C7orf59,ZCWPW1,TSC22D4,SLC12A9,MEPCE,LRCH4,GNB2,PILRB,PILRA	PILRB,PMS2P1,PILRA	PILRA	IMR90	Hi-C	24141950	PILRA	3488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	99969754	99970252	99970079	Y	OR2AE1,C7orf59,ZCWPW1,SLC12A9,MEPCE,LRCH4,GNB2,PILRB,PILRA	PILRB,PMS2P1,PILRA	NA	NA	NA	NA	PILRA	6601	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	100042030	100042585	100042239	Y	COPS6,EPHB4	MEPCE,ZCWPW1,RP11-758P17.3,PPP1R35,TSC22D4,NYAP1	NA	NA	NA	NA	PPP1R35	9842	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.674167938895547
chr7	100142246	100142436	100142312	Y	NA	AGFG2,RP11-44M6.3,LRCH4	NA	NA	NA	NA	AGFG2	7412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr7	100143295	100143664	100143516	Y	NA	AGFG2,RP11-44M6.3,LRCH4	NA	NA	NA	NA	AGFG2	8461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	100144113	100144628	100144364	Y	NA	AGFG2,RP11-44M6.3,LRCH4	NA	NA	NA	NA	AGFG2	9279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr7	100144720	100144853	100144769	Y	NA	AGFG2,RP11-44M6.3,LRCH4	NA	NA	NA	NA	AGFG2	9886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	100167857	100168189	100168134	Y	NA	AGFG2,RP11-44M6.3,LRCH4,PCOLCE,PCOLCE-AS1,MOSPD3	NA	NA	NA	NA	RP11-44M6.3	2103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.238638051599282
chr7	100743461	100743946	100743576	Y	GNB2,TRIM56	TRIM56,SERPINE1	SERPINE1	IMR90	Hi-C	24141950	TRIM56	16741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	100760673	100761017	100760905	Y	GNB2,EPHB4,ZNHIT1,PLOD3,AP1S1,SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	AP1S1,VGF	MCF7	ChIA-PET	22265404	SERPINE1	7353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	100765253	100766084	100765924	Y	TRIM56,SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	NA	NA	NA	NA	SERPINE1	2286	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.863997314203171
chr7	100772573	100772742	100772614	Y	SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	NA	NA	NA	NA	SERPINE1	4203	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	100772917	100773243	100773005	Y	SERPINE1	TRIM56,SERPINE1,AP1S1,VGF	NA	NA	NA	NA	SERPINE1	4547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chr7	100809834	100810470	100810178	Y	NA	SERPINE1,AP1S1,VGF,MOGAT3,ZNHIT1,PLOD3	NA	NA	NA	NA	VGF	2960	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	100952176	100952182	100952179	Y	NA	RP11-132A1.3,RABL5	NA	NA	NA	NA	RABL5	10922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr7	101245696	101245932	101245814	Y	MOGAT3	NA	NA	NA	NA	NA	CUX1	211027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	101499743	101500539	101499888	Y	SH2B2,CUX1,CUX1,CUX1	CUX1	NA	NA	NA	NA	CUX1	42784	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	101526005	101526525	101526438	Y	SH2B2,CUX1,CUX1	NA	NA	NA	NA	NA	CUX1	69046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.266248013784872
chr7	101567515	101567769	101567671	Y	NA	NA	NA	NA	NA	NA	CUX1	110556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	101585210	101585567	101585389	Y	NA	NA	NA	NA	NA	NA	CUX1	128251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	101672273	101672589	101672281	Y	NA	NA	NA	NA	NA	NA	CUX1	215314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr7	101775527	101775981	101775908	Y	CUX1,CUX1,SH2B2,ORAI2	NA	NA	NA	NA	NA	PRKRIP1	226338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr7	101789481	101789757	101789558	Y	NA	NA	NA	NA	NA	NA	PRKRIP1	212562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	101929978	101930313	101930074	Y	CUX1,CUX1,CUX1,PRKRIP1,ORAI2,LRWD1,ALKBH4,SH2B2	NA	NA	NA	NA	NA	PRKRIP1	72006	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.81386303580867
chr7	101930729	101931104	101930861	Y	NA	NA	NA	NA	NA	NA	PRKRIP1	71215	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	102104317	102104602	102104460	Y	NA	ORAI2,ALKBH4,LRWD1,POLR2J	NA	NA	NA	NA	LRWD1	941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	102464517	102464880	102464701	Y	NA	NA	NA	NA	NA	NA	FAM185A	77099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	102514621	102514825	102514690	Y	NA	LRRC17	FAM185A	IMR90	Hi-C	24141950	LRRC17	36613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	102516226	102516619	102516429	Y	LRRC17	LRRC17	FAM185A	IMR90	Hi-C	24141950	LRRC17	34819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	102958965	102959200	102958983	Y	NA	DPY19L2P2,PMPCB,PSMC2,DNAJC2,CTA-276O3.4	NA	NA	NA	NA	PMPCB	23096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	102959356	102959407	102959404	Y	PMPCB,DNAJC2	DPY19L2P2,PMPCB,PSMC2,DNAJC2,CTA-276O3.4	NA	NA	NA	NA	PSMC2	23294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr7	103125674	103125695	103125684	Y	SLC26A5	NA	NA	NA	NA	NA	CTA-276O3.4	138626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr7	103345124	103345134	103345130	Y	SLC26A5,RELN	NA	NA	NA	NA	NA	RELN	282829	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	103508176	103508210	103508209	Y	NA	NA	NA	NA	NA	NA	RELN	119753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	103509686	103510063	103509875	Y	NA	NA	NA	NA	NA	NA	RELN	117900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	103628735	103629126	103629058	Y	RELN	RELN	NA	NA	NA	NA	RELN	772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr7	104585458	104586124	104585640	Y	MLL5	RP11-325F22.2	LHFPL3,MLL5,SRPK2,LOC723809,LOC100216545,LOC100216546	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-325F22.2	5948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr7	104626890	104627731	104627241	Y	MLL5	RP11-325F22.2,LINC01004	NA	NA	NA	NA	LINC01004	23760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	104884738	104885065	104884890	Y	NA	NA	NA	NA	NA	NA	SRPK2	152690	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	104960256	104960357	104960307	Y	MLL5,SRPK2	NA	NA	NA	NA	NA	SRPK2	77398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	105123568	105123582	105123575	Y	NA	PUS7,RINT1	NA	NA	NA	NA	PUS7	37132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	105223133	105223294	105223281	Y	NA	EFCAB10	NA	NA	NA	NA	EFCAB10	16028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr7	105455089	105455224	105455200	Y	NAMPT,ATXN7L1	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	2714	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	105459888	105460220	105459903	Y	NA	CTA-351J1.1	NA	NA	NA	NA	CTA-351J1.1	1950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.340369642359917
chr7	105602769	105602970	105602871	Y	NA	NA	NA	NA	NA	NA	CDHR3	87527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	105711914	105712310	105712244	Y	NA	SYPL1	NA	NA	NA	NA	SYPL1	38712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	105766301	105766504	105766403	Y	NA	SYPL1	CDHR3,ATXN7L1,SYPL1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SYPL1	15279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	106808132	106808705	106808532	Y	NA	HBP1	NA	NA	NA	NA	HBP1	726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	106838325	106838672	106838499	Y	NA	HBP1	NA	NA	NA	NA	HBP1	30919	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	106901302	106901364	106901333	Y	NA	NA	NA	NA	NA	NA	HBP1	93896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	107026511	107026865	107026723	Y	NA	NA	NA	NA	NA	NA	DUS4L	175064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	107109276	107109645	107109473	Y	NA	NA	NA	NA	NA	NA	DUS4L	92284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	107116622	107117169	107116900	Y	NA	NA	NA	NA	NA	NA	DUS4L	84760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	107205466	107205592	107205534	Y	COG5	DUS4L,COG5,BCAP29	NA	NA	NA	NA	COG5	2507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	107562078	107562130	107562088	Y	NA	DLD	NA	NA	NA	NA	DLD	32663	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	107567788	107568066	107567911	Y	NA	DLD	NA	NA	NA	NA	DLD	38373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	107573965	107574445	107574339	Y	LAMB1	DLD	NA	NA	NA	NA	DLD	44550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	107644827	107645024	107644950	Y	LAMB1	LAMB1	NA	NA	NA	NA	LAMB1	3127	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.33633704783903
chr7	108015500	108015588	108015544	Y	NA	NA	NA	NA	NA	NA	RPL7P32	133089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	109682039	109682053	109682046	Y	NA	NA	NA	NA	NA	NA	AC003088.1	490758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	110723657	110723799	110723727	Y	LRRN3	NA	NA	NA	NA	NA	IMMP2L	476774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	110732834	110733321	110733005	Y	NA	NA	NA	NA	NA	NA	IMMP2L	467252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	110753766	110754103	110753883	Y	LRRN3	NA	NA	NA	NA	NA	IMMP2L	446470	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	110808410	110808626	110808556	Y	NA	NA	NA	NA	NA	NA	IMMP2L	391947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	110856868	110857086	110856977	Y	NA	NA	NA	NA	NA	NA	IMMP2L	343487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	110956734	110956926	110956906	Y	NA	NA	NA	NA	NA	NA	IMMP2L	243647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	111024464	111024780	111024739	Y	NA	NA	NA	NA	NA	NA	IMMP2L	175793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	111156714	111156954	111156834	Y	NA	IMMP2L	NA	NA	NA	NA	IMMP2L	43619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	111396932	111397360	111397129	Y	NA	NA	NA	NA	NA	NA	IMMP2L	196359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	111421395	111421784	111421410	Y	NA	NA	NA	NA	NA	NA	IMMP2L	220822	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	111594540	111594797	111594666	Y	NA	NA	NA	NA	NA	NA	DOCK4	249669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	111743149	111743610	111743481	Y	ZNF277,IFRD1,DOCK4	NA	NA	NA	NA	NA	DOCK4	100856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	111755402	111755532	111755467	Y	ZNF277,IFRD1,IFRD1,DOCK4	NA	NA	NA	NA	NA	DOCK4	88934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	111814530	111814935	111814850	Y	NA	DOCK4,ZNF277	NA	NA	NA	NA	DOCK4	29531	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	111819433	111819596	111819575	Y	NA	DOCK4,ZNF277	NA	NA	NA	NA	DOCK4	24870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	111832262	111832632	111832471	Y	NA	DOCK4,ZNF277	NA	NA	NA	NA	DOCK4	11834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	112062066	112062509	112062349	Y	DOCK4,ZNF277,IFRD1,IFRD1,IFRD1	IFRD1	NA	NA	NA	NA	IFRD1	1043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	114056337	114056620	114056363	Y	NA	NA	NA	NA	NA	NA	LINC00998	1299669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	114301114	114301124	114301119	Y	FOXP2	NA	NA	NA	NA	NA	LINC00998	1544446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	115873924	115874179	115873941	Y	TES	TES	NA	NA	NA	NA	TES	25377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	115887290	115887609	115887434	Y	NA	TES,CAV2	NA	NA	NA	NA	CAV2	37825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	115957232	115957778	115957588	Y	NA	CAV2	CAV1,CAV2,TES,CAPZA2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CAV2	31798	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	116483555	116483740	116483606	Y	CAPZA2	CAPZA2	MET,TES	IMR90	Hi-C	24141950	CAPZA2	34431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	116504290	116504456	116504319	Y	NA	NA	NA	NA	NA	NA	CAPZA2	55166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	116651956	116652355	116652105	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	59568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	116793573	116793925	116793605	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	201185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	116804623	116804954	116804811	Y	NA	NA	NA	NA	NA	NA	ST7-AS1	212235	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	118520575	118520914	118520745	Y	NA	NA	NA	NA	NA	NA	NAA38	698489	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	119283625	119284006	119283817	Y	NA	NA	NA	NA	NA	NA	RP11-328J2.1	261423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	119300626	119300913	119300840	Y	NA	NA	NA	NA	NA	NA	RP11-328J2.1	244516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	119435371	119435694	119435534	Y	NA	NA	NA	NA	NA	NA	RP11-328J2.1	109735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	120703433	120703512	120703470	Y	NA	NA	NA	NA	NA	NA	ING3	114630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	120884704	120884786	120884745	Y	NA	NA	NA	NA	NA	NA	FAM3C	149632	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	121008996	121009049	121009023	Y	NA	FAM3C	NA	NA	NA	NA	FAM3C	25369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	121783025	121783385	121783205	Y	PTPRZ1,AASS	AASS	NA	NA	NA	NA	AASS	691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr7	121951485	121951902	121951877	Y	NA	NA	NA	NA	NA	NA	AASS	169151	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	121951914	121952318	121952125	Y	NA	NA	NA	NA	NA	NA	AASS	169580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	122148231	122148536	122148406	Y	NA	NA	NA	NA	NA	NA	RPS26P31	170808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	122273442	122273779	122273758	Y	CADPS2	RPS26P31	NA	NA	NA	NA	RPS26P31	45565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	122319383	122319737	122319553	Y	NA	RPS26P31	NA	NA	NA	NA	RPS26P31	39	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr7	123387767	123387941	123387854	Y	NA	WASL	NA	NA	NA	NA	WASL	646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.126221388444239
chr7	124419446	124419631	124419539	Y	NA	NA	NA	NA	NA	NA	POT1-AS1	148296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	127663304	127663714	127663503	Y	IMPDH1,GCC1,LRRC4	NA	NA	NA	NA	NA	RBM28	318248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	127775885	127775901	127775893	Y	NA	NA	SND1,MIR129-1	IMR90	Hi-C	24141950	RBM28	206061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	127876972	127877440	127877187	Y	IMPDH1,LRRC4	NA	PAX4,FSCN3,SND1,LEP,RBM28	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RBM28	104522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	128170830	128171695	128171212	Y	NA	RP11-212P7.1	IMPDH1,HILPDA,METTL2B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	RP11-212P7.1	37047	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.29581480246807
chr7	128249599	128249637	128249625	Y	NA	RP11-212P7.1	FLJ45340,CALU,FAM71F1,IRF5	IMR90	Hi-C	24141950	RP11-212P7.1	40857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	128383172	128383597	128383318	Y	NA	CALU,CCDC136	NA	NA	NA	NA	CALU	5826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	128915299	128915657	128915368	Y	NA	NA	NA	NA	NA	NA	AHCYL2	52435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	128995385	128995592	128995489	Y	NA	NA	FAM40B	IMR90	Hi-C	24141950	RP11-305M3.2	52619	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	129419118	129419176	129419138	Y	NA	NA	UBE2H,NRF1	MCF7	ChIA-PET	22265404	NRF1	169563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	129419876	129420343	129420085	Y	NA	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	NRF1	170321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.481550439120645
chr7	129421490	129421976	129421792	Y	FAM40B	NA	NRF1,UBE2H	MCF7	ChIA-PET	22265404	UBE2H	168813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	129464915	129465297	129464948	Y	NA	NA	NA	NA	NA	NA	UBE2H	125492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	129465628	129465864	129465722	Y	NA	NA	NA	NA	NA	NA	UBE2H	124925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr7	129469996	129470292	129470140	Y	NA	NA	NA	NA	NA	NA	UBE2H	120497	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	129590044	129590333	129590306	Y	NA	UBE2H	NA	NA	NA	NA	UBE2H	456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	129598516	129598781	129598654	Y	NRF1,UBE2H,UBE2H	UBE2H	UBE2H,NRF1,AHCYL2,SMO,ZC3HC1	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	UBE2H	7727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	129960010	129960125	129960069	Y	NA	CPA4	NA	NA	NA	NA	CPA4	29036	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	129990951	129991103	129991027	Y	NA	NA	NA	NA	NA	NA	CPA4	59977	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	130013597	130013906	130013823	Y	CPA2,CPA1	NA	NA	NA	NA	NA	CEP41	66368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.235186870276983
chr7	130530611	130530821	130530670	Y	NA	NA	MEST,KLHDC10,MIR29A,MIR29B1,ZC3HC1,C7orf45,CPA5,LOC646329	IMR90	Hi-C	24141950	MIR29A	65248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	130571851	130572495	130572306	Y	MKLN1,MKLN1	MIR29A	NA	NA	NA	NA	MIR29A	23574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr7	130575591	130576512	130576394	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	19557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	130581597	130582393	130581985	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	13676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	130586004	130586434	130586371	Y	NA	MIR29A	NA	NA	NA	NA	MIR29A	9635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.121947564129356
chr7	130588239	130588699	130588531	Y	MKLN1,MKLN1	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	7370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr7	130589567	130590049	130589961	Y	NA	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	6020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr7	130593505	130595916	130594870	Y	NA	MIR29A	MIR29A,MIR29B1	IMR90	Hi-C	24141950	MIR29A	153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr7	130601178	130601963	130601463	Y	MKLN1,MKLN1	MIR29A	FLJ43663	IMR90	Hi-C	24141950	MIR29A	5109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	130602337	130602820	130602733	Y	MKLN1,MKLN1	MIR29A	FLJ43663	IMR90	Hi-C	24141950	MIR29A	6268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	130720133	130720826	130720768	Y	MKLN1,MKLN1	NA	NA	NA	NA	NA	MKLN1	72029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	130741821	130742227	130742136	Y	NA	NA	NA	NA	NA	NA	MKLN1	50628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr7	130875085	130875581	130875276	Y	NA	AC009362.2	NA	NA	NA	NA	AC009362.2	49768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr7	131010342	131010498	131010376	Y	MKLN1,MKLN1	MKLN1-AS	NA	NA	NA	NA	MKLN1-AS	483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.27134499269954
chr7	131105085	131105454	131105312	Y	NA	NA	NA	NA	NA	NA	MKLN1-AS	94104	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	132106504	132106703	132106622	Y	PLXNA4	NA	NA	NA	NA	NA	CHCHD3	658145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	132505379	132505401	132505390	Y	PLXNA4	NA	NA	NA	NA	NA	CHCHD3	259447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	134117156	134117311	134117298	Y	NA	AKR1B1	NA	NA	NA	NA	AKR1B1	24725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.804001118014046
chr7	134287776	134287871	134287820	Y	NA	BPGM	AKR1B1,AKR1B10,AKR1B15,BPGM	IMR90	Hi-C	24141950	BPGM	41689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr7	134845913	134846266	134846037	Y	WDR91,CNOT4,TMEM140	TMEM140,C7orf49,WDR91	NA	NA	NA	NA	C7orf49	7281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	135665513	135665767	135665568	Y	NA	MTPN	NA	NA	NA	NA	MTPN	5412	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	135771654	135771794	135771701	Y	NA	NA	NA	NA	NA	NA	MTPN	111553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	136495640	136495742	136495691	Y	NA	NA	NA	NA	NA	NA	MTPN	835539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	136900611	136900746	136900679	Y	NA	NA	NA	NA	NA	NA	CREB3L2	784067	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	137372806	137372951	137372895	Y	NA	NA	NA	NA	NA	NA	CREB3L2	311862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	137544616	137544738	137544677	Y	NA	NA	NA	NA	NA	NA	CREB3L2	140075	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	137671053	137671416	137671301	Y	TRIM24,CREB3L2	CREB3L2,AKR1D1	NA	NA	NA	NA	CREB3L2	13397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr7	137673807	137674359	137674139	Y	NA	CREB3L2,AKR1D1	NA	NA	NA	NA	CREB3L2	10454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	137685065	137685809	137685664	Y	TRIM24,CREB3L2	CREB3L2	NA	NA	NA	NA	AKR1D1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	137854250	137854558	137854387	Y	TRIM24	NA	ATP6V0A4	IMR90	Hi-C	24141950	AC008155.2	126671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	137928273	137928746	137928445	Y	AKR1D1,TRIM24	NA	NA	NA	NA	NA	AC008155.2	52483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr7	137942214	137942717	137942409	Y	TRIM24	AC008155.2	NA	NA	NA	NA	AC008155.2	38512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.233049958119541
chr7	138001269	138001637	138001460	Y	TRIM24	AC008155.2	NA	NA	NA	NA	AC008155.2	20040	CAGE	HepG2 ENCODE	hg19	FANTOM5	7.94044845392243
chr7	138035380	138035759	138035568	Y	CREB3L2,SVOPL,TRIM24	NA	NA	NA	NA	NA	AC008155.1	51509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	138081171	138081424	138081337	Y	TRIM24	AC008155.1	NA	NA	NA	NA	AC008155.1	5844	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.19967130518718
chr7	138249829	138249954	138249896	Y	NA	NA	NA	NA	NA	NA	TRIM24	106750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	138250447	138250496	138250473	Y	AKR1D1,TRIM24	NA	NA	NA	NA	NA	TRIM24	107368	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.38449400021365
chr7	138858843	138859133	138858995	Y	SVOPL	TTC26	NA	NA	NA	NA	TTC26	42353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	138917056	138917428	138917261	Y	ZC3HAV1,UBN2	UBN2	NA	NA	NA	NA	UBN2	3954	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr7	139227178	139227349	139227257	Y	NA	ERHP1	NA	NA	NA	NA	ERHP1	10192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.417942452257261
chr7	139367600	139367827	139367677	Y	TBXAS1	NA	NA	NA	NA	NA	TBXAS1	107023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	139420496	139420947	139420749	Y	TBXAS1,JHDM1D,HIPK2	NA	NA	NA	NA	NA	TBXAS1	53903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	139430911	139431484	139431231	Y	TBXAS1,JHDM1D,LUC7L2	TBXAS1,HIPK2	NA	NA	NA	NA	TBXAS1	43366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	139498127	139498170	139498155	Y	TBXAS1	TBXAS1,HIPK2	NA	NA	NA	NA	HIPK2	22550	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	139521669	139522044	139521707	Y	LUC7L2	TBXAS1,HIPK2	NA	NA	NA	NA	HIPK2	46092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	139865327	139865485	139865448	Y	TBXAS1,JHDM1D	NA	NA	NA	NA	NA	PARP12	103806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	139899867	139900246	139899982	Y	TBXAS1,JHDM1D	NA	NA	NA	NA	NA	PARP12	138346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	139929659	139930294	139929953	Y	TBXAS1,RAB19,JHDM1D	NA	JHDM1D,LOC100134229	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PARP12	168138	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.9403256540469
chr7	139930411	139930852	139930521	Y	TBXAS1,JHDM1D	NA	LOC100134229,JHDM1D	MCF7	ChIA-PET	22265404	PARP12	168890	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.442923876113137
chr7	139930863	139931473	139931211	Y	TBXAS1,JHDM1D	NA	LOC100134229,JHDM1D	MCF7	ChIA-PET	22265404	PARP12	169342	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.11642010317658
chr7	139952632	139953094	139952865	Y	TBXAS1,JHDM1D	NA	JHDM1D	IMR90	Hi-C	24141950	RAB19	148749	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr7	140372003	140372139	140372071	Y	NA	ADCK2,NDUFB2	NA	NA	NA	NA	ADCK2	1050	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	140613036	140613224	140613135	Y	NA	BRAF	NA	NA	NA	NA	BRAF	9340	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	141285767	141286195	141285861	Y	TAS2R38,AGK	AGK	NA	NA	NA	NA	AGK	36778	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	141334636	141334647	141334642	Y	TAS2R3	NA	NA	NA	NA	NA	KIAA1147	65306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	141501394	141501805	141501703	Y	NA	NA	NA	NA	NA	NA	SSBP1	65273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	141804639	141804894	141804740	Y	CLEC5A,TAS2R38	NA	NA	NA	NA	NA	SSBP1	368518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr7	143083267	143084129	143083354	Y	TAS2R40,FAM131B,FAM131B	AC093673.5,ZYX,EPHA1	NA	NA	NA	NA	ZYX	7094	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.136083817846062
chr7	143589612	143589642	143589628	Y	OR2F1,OR2A2,OR2A25,OR2A12,TAS2R60,FAM115A,FAM115A,FAM115A	FAM115A	NA	NA	NA	NA	FAM115A	7649	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	143602007	143602175	143602077	Y	OR2F1,OR2A2,OR2A25,OR2A12,FAM115A,FAM115A	FAM115A	NA	NA	NA	NA	FAM115A	4716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.654774608519411
chr7	144462107	144462147	144462127	Y	NA	NA	NA	NA	NA	NA	TPK1	69341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	144473103	144473255	144473180	Y	NA	NA	NA	NA	NA	NA	TPK1	58233	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	146573041	146573429	146573238	Y	NA	NA	NA	NA	NA	NA	AC005229.5	1702064	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	148637842	148638122	148637883	Y	NA	RNY5	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNY5	1262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr7	148638273	148638633	148638462	Y	NA	RNY5	EZH2,ZNF786,ZNF398,ZNF425,CUL1	K562,MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNY5	1693	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.07699139669875
chr7	148684338	148684706	148684475	Y	NA	RNY5,PDIA4	NA	NA	NA	NA	PDIA4	39027	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr7	148685182	148685277	148685231	Y	NA	RNY5,PDIA4	NA	NA	NA	NA	PDIA4	38456	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	148788414	148788490	148788418	Y	CUL1,ZNF786,ZNF425,ZNF398	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF786	2540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr7	148788628	148788884	148788863	Y	ZNF783,CUL1,EZH2,ZNF786,ZNF398	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF786	2754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	148824928	148825234	148824952	Y	NA	ZNF786,ZNF425,ZNF398	NA	NA	NA	NA	ZNF398	3420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	149280287	149280529	149280408	Y	NA	ZNF767	NA	NA	NA	NA	ZNF767	39314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	149468740	149469267	149468803	Y	NA	ZNF467	NA	NA	NA	NA	ZNF467	172	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	149745351	149745623	149745500	Y	NA	NA	NA	NA	NA	NA	ATP6V0E2-AS1	169652	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.579007693959199
chr7	150075425	150075527	150075503	Y	NA	RARRES2,REPIN1,ZNF775,RP4-584D14.6	NA	NA	NA	NA	RP4-584D14.6	3446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr7	150691752	150691942	150691795	Y	GIMAP7,GIMAP4,GIMAP6,GIMAP2,GIMAP1,GIMAP5,LOC100128542	KCNH2,NOS3,ABCB8	NA	NA	NA	NA	NOS3	5669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr7	151157060	151157432	151157203	Y	NA	NA	CRYGN	IMR90	Hi-C	24141950	WDR86	51247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr7	151184518	151184840	151184768	Y	NA	RHEB	NA	NA	NA	NA	RHEB	30366	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	151198552	151198933	151198803	Y	AGAP3,PRKAG2,PRKAG2	RHEB	CRYGN	IMR90	Hi-C	24141950	RHEB	16273	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chr7	151199311	151199621	151199557	Y	NA	RHEB	CRYGN	IMR90	Hi-C	24141950	RHEB	15585	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	151284346	151284467	151284405	Y	SMARCD3,SMARCD3,WDR86	NA	NA	NA	NA	NA	RHEB	69140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr7	151442202	151442898	151442523	Y	NA	NA	CRYGN,RHEB	IMR90	Hi-C	24141950	PRKAG2-AS1	129229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	151493401	151493985	151493754	Y	RHEB,PRKAG2,PRKAG2	NA	NA	NA	NA	NA	PRKAG2-AS1	78142	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	152065077	152065428	152065152	Y	NA	NA	NA	NA	NA	NA	FABP5P3	66552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr7	152105895	152106094	152106005	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	25886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr7	152123020	152123275	152123182	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	8705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	152160715	152161193	152160959	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	28735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.385567039584513
chr7	152161348	152162014	152161594	Y	NA	FABP5P3	NA	NA	NA	NA	FABP5P3	29368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.628970541670951
chr7	152219127	152219295	152219254	Y	NA	NA	NA	NA	NA	NA	FABP5P3	87147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	152235560	152235891	152235729	Y	NA	NA	NA	NA	NA	NA	FABP5P3	103580	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr7	152338571	152338711	152338613	Y	NA	XRCC2	NA	NA	NA	NA	XRCC2	32539	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr7	152365221	152365384	152365303	Y	MLL3	XRCC2	NA	NA	NA	NA	XRCC2	5866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	153585684	153585818	153585716	Y	DPP6,DPP6,DPP6	NA	NA	NA	NA	NA	ACTR3B	1130850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	154558351	154558673	154558512	Y	NA	NA	NA	NA	NA	NA	PAXIP1	234121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	154742897	154743129	154742996	Y	NA	PAXIP1	NA	NA	NA	NA	PAXIP1	49665	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr7	154958521	154958650	154958585	Y	NA	NA	PAXIP1,HTR5A,LOC100128264,CNPY1	IMR90	Hi-C	24141950	INSIG1	128836	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	155137693	155138087	155137815	Y	NA	NA	INSIG1,PAXIP1,LOC100132707,LOC100128264,HTR5A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	INSIG1	50207	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	155580383	155580450	155580415	Y	NA	SHH	NA	NA	NA	NA	SHH	22517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	155678402	155678700	155678446	Y	NA	NA	LMBR1	IMR90	Hi-C	24141950	AC021218.2	74626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	155744220	155744341	155744281	Y	NA	AC021218.2	LOC285889,SHH,LMBR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC021218.2	8985	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	155744375	155744769	155744531	Y	NA	AC021218.2	LOC285889,SHH,LMBR1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AC021218.2	8557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.514256868613704
chr7	155754558	155754796	155754722	Y	NA	AC021218.2	LOC285889	IMR90	Hi-C	24141950	AC021218.2	1232	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.303228779200014
chr7	156208710	156208799	156208755	Y	NA	NA	LOC285889	IMR90	Hi-C	24141950	RNU4-31P	453973	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	156309005	156309294	156309056	Y	RNF32	NA	RNF32,C7orf13,SHH,RBM33,LINC00244,LMBR1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RNU4-31P	353478	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.37298577321946
chr7	156401711	156402014	156401849	Y	NA	NA	RNF32,C7orf13	K562	ChIA-PET	22265404	RNU4-31P	260758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.745329500713366
chr7	156407407	156407702	156407556	Y	NOM1,MNX1,RNF32	NA	RBM33,LMBR1	IMR90	Hi-C	24141950	RNU4-31P	255070	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.85643240631075
chr7	156409241	156409518	156409427	Y	NA	NA	NA	NA	NA	NA	RNU4-31P	253254	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.44135921057
chr7	156735476	156735625	156735551	Y	MNX1	NOM1	LMBR1	K562	ChIA-PET	22265404	NOM1	4792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	156804828	156804838	156804833	Y	NA	MNX1	NA	NA	NA	NA	MNX1	3483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	157034052	157034373	157034213	Y	NA	NA	NA	NA	NA	NA	RP4-814D15.2	50990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	157054104	157054271	157054188	Y	NA	NA	NA	NA	NA	NA	RP4-814D15.2	71042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	157064608	157064951	157064706	Y	NA	NA	NA	NA	NA	NA	DNAJB6	61124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	157071910	157072285	157071928	Y	NA	NA	NA	NA	NA	NA	DNAJB6	53790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	157078729	157079029	157078826	Y	NA	DNAJB6	NA	NA	NA	NA	DNAJB6	47046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.225816067047433
chr7	157082177	157082296	157082243	Y	NA	DNAJB6	NA	NA	NA	NA	DNAJB6	43779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	157082402	157082699	157082633	Y	NA	DNAJB6	NA	NA	NA	NA	DNAJB6	43376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr7	157085416	157085724	157085621	Y	DNAJB6,DNAJB6	DNAJB6	NA	NA	NA	NA	DNAJB6	40351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	157103071	157103446	157103266	Y	NA	DNAJB6	UBE3C,DNAJB6	IMR90	Hi-C	24141950	DNAJB6	22629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	157110858	157111344	157110968	Y	NA	DNAJB6	UBE3C,DNAJB6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAJB6	14731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	157112606	157112849	157112710	Y	NA	DNAJB6	UBE3C,DNAJB6	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DNAJB6	13226	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.36000369092285
chr7	157334866	157335140	157335002	Y	DNAJB6,DNAJB6	NA	NA	NA	NA	NA	DNAJB6	208791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	157557490	157557665	157557578	Y	NA	NA	NA	NA	NA	NA	AC011899.9	87556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	157793988	157794028	157794008	Y	NA	NA	NA	NA	NA	NA	AC011899.9	148767	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	158110398	158110735	158110581	Y	NA	NA	NA	NA	NA	NA	AC078942.1	217452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr7	158224670	158224991	158224878	Y	NA	NA	NA	NA	NA	NA	AC078942.1	103196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	158225517	158225999	158225657	Y	NA	NA	NA	NA	NA	NA	AC078942.1	102188	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chr7	158262390	158262764	158262595	Y	NA	NA	NA	NA	NA	NA	AC078942.1	65423	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	158357376	158357683	158357548	Y	NA	AC078942.1,PTPRN2	NA	NA	NA	NA	PTPRN2	20797	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr7	158378369	158378681	158378482	Y	PTPRN2	NA	NA	NA	NA	NA	PTPRN2	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr7	158387429	158387829	158387629	Y	WDR60	PTPRN2	PTPRN2	K562	ChIA-PET	22265404	PTPRN2	8949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr7	158500449	158500649	158500582	Y	NA	NCAPG2	NA	NA	NA	NA	NCAPG2	4929	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.951592651247101
chr7	158603982	158604371	158604316	Y	NA	ESYT2,WDR60	NA	NA	NA	NA	ESYT2	16573	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr7	158609735	158609944	158609833	Y	ESYT2	ESYT2,WDR60	NA	NA	NA	NA	ESYT2	11000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr7	158613624	158614053	158613981	Y	ESYT2	ESYT2,WDR60	NA	NA	NA	NA	ESYT2	6891	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	479972	480137	480087	Y	NA	NA	NA	NA	NA	NA	FBXO25	125544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	582547	582966	582856	Y	ERICH1	NA	NA	NA	NA	NA	ERICH1	103140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	603336	603665	603448	Y	ERICH1	NA	NA	NA	NA	NA	ERICH1	82441	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	637812	637858	637835	Y	NA	ERICH1	NA	NA	NA	NA	ERICH1	48248	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	638062	638589	638348	Y	ZNF596,ZNF596,ERICH1	ERICH1	NA	NA	NA	NA	ERICH1	47517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr8	1045033	1045096	1045065	Y	NA	NA	NA	NA	NA	NA	ERICH1	358927	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	1321281	1321540	1321454	Y	NA	NA	DLGAP2	IMR90	Hi-C	24141950	CLN8	380404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	1845111	1845463	1845298	Y	KBTBD11	NA	NA	NA	NA	NA	CTD-2336O2.1	134443	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	6323096	6323426	6323195	Y	NA	NA	NA	NA	NA	NA	RP11-115C21.2	60433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.23650113944184
chr8	6405382	6405492	6405403	Y	NA	ANGPT2	NA	NA	NA	NA	ANGPT2	13438	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	6536860	6537447	6537204	Y	NA	CTD-2541M15.1,AGPAT5	LOC100287015,MCPH1,ANGPT2	IMR90	Hi-C	24141950	CTD-2541M15.1	26283	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	6575644	6576065	6575803	Y	MCPH1,AGPAT5	CTD-2541M15.1,AGPAT5	NA	NA	NA	NA	AGPAT5	11766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	8147008	8147233	8147135	Y	NA	NA	SGK223,MFHAS1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SGK223	94775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	8153597	8154098	8153801	Y	NA	NA	MFHAS1,SGK223,CLDN23,FLJ10661	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SGK223	87910	CAGE	HepG2 ENCODE	hg19	FANTOM5	3.51514065574045
chr8	8241572	8241733	8241653	Y	NA	SGK223	NA	NA	NA	NA	SGK223	275	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr8	8242841	8243169	8242949	Y	NA	SGK223	NA	NA	NA	NA	SGK223	833	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	8340993	8341010	8341002	Y	NA	CTA-398F10.2	SGK223	IMR90	Hi-C	24141950	CTA-398F10.2	24146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	8701542	8701893	8701762	Y	NA	MFHAS1	NA	NA	NA	NA	MFHAS1	47262	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	8742026	8742246	8742225	Y	NA	MFHAS1	NA	NA	NA	NA	MFHAS1	6909	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	8746516	8746997	8746809	Y	CLDN23	MFHAS1	NA	NA	NA	NA	MFHAS1	2158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	8883496	8883931	8883840	Y	NA	ERI1	NA	NA	NA	NA	ERI1	25839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	9764051	9764441	9764391	Y	MSRA	NA	NA	NA	NA	NA	MSRA	145337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	9912937	9913246	9913138	Y	NA	MSRA	NA	NA	NA	NA	MSRA	3159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	9978890	9979101	9978960	Y	MSRA	NA	NA	NA	NA	NA	MSRA	69112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	10187572	10187859	10187580	Y	NA	NA	NA	NA	NA	NA	MSRA	277794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	10192260	10192787	10192448	Y	MSRA	NA	NA	NA	NA	NA	MSRA	282482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	10573649	10573859	10573801	Y	SOX7	NA	NA	NA	NA	NA	PINX1	121535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	10589802	10590079	10589941	Y	NA	NA	NA	NA	NA	NA	PINX1	105315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	10681939	10682203	10682138	Y	RP1L1	PINX1	NA	NA	NA	NA	PINX1	13191	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	11032163	11032532	11032339	Y	NA	NA	NA	NA	NA	NA	MTMR9	107393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	11690057	11690160	11690110	Y	NA	SUB1P1,FDFT1,RP11-297N6.4,CTSB	NA	NA	NA	NA	RP11-297N6.4	31980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	11734631	11734824	11734746	Y	CTSB	CTSB	CTSB,BLK,FDFT1,FAM167A	IMR90	Hi-C	24141950	CTSB	9674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	11735335	11735756	11735393	Y	CTSB	CTSB	CTSB,BLK,FDFT1,FAM167A	IMR90	Hi-C	24141950	CTSB	10378	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	11749167	11749418	11749260	Y	CTSB	CTSB	CTSB,FAM167A,BLK,NEIL2,GATA4,FDFT1	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	CTSB	24210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	11754568	11755261	11754938	Y	CTSB	CTSB	CTSB,FAM167A,BLK,NEIL2,GATA4,FDFT1	IMR90	Hi-C	24141950	CTSB	29611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.157614060379639
chr8	12608373	12608831	12608472	Y	NA	LONRF1	NA	NA	NA	NA	LONRF1	2751	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	13101435	13101826	13101810	Y	NA	NA	NA	NA	NA	NA	DLC1	269341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	13122971	13123135	13123062	Y	DLC1	NA	NA	NA	NA	NA	DLC1	248032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	13224231	13224684	13224410	Y	NA	NA	NA	NA	NA	NA	DLC1	146483	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.398880650308635
chr8	13562833	13563206	13563027	Y	NA	NA	NA	NA	NA	NA	C8orf48	140481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	16965727	16966045	16965748	Y	NA	ZDHHC2	NA	NA	NA	NA	ZDHHC2	45493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	17194213	17194219	17194216	Y	SLC7A2,SLC7A2	NA	NA	NA	NA	NA	CNOT7	91826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	17355613	17356072	17355737	Y	NA	SLC7A2	NA	NA	NA	NA	SLC7A2	3016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	17465660	17466084	17465890	Y	MTUS1	PDGFRL	NA	NA	NA	NA	PDGFRL	33718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	17595582	17595868	17595676	Y	NAT1	NA	NA	NA	NA	NA	MTUS1	60558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	17665479	17665814	17665519	Y	NA	MTUS1,RP11-156K13.1	NA	NA	NA	NA	RP11-156K13.1	8625	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	17769259	17769486	17769373	Y	NAT1	FGL1,PCM1	MTUS1,FGL1,MTMR7	IMR90	Hi-C	24141950	FGL1	3385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.634558635150691
chr8	18768857	18769292	18769046	Y	NA	NA	NA	NA	NA	NA	PSD3	170948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	18836263	18836433	18836318	Y	NA	NA	NA	NA	NA	NA	PSD3	103807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	18854306	18854486	18854451	Y	NA	NA	NA	NA	NA	NA	PSD3	85754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	19266409	19266742	19266623	Y	CSGALNACT1	NA	NA	NA	NA	NA	SH2D4A	97281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chr8	19293000	19293226	19293113	Y	NA	NA	NA	NA	NA	NA	SH2D4A	123872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	19518773	19518959	19518866	Y	NA	NA	NA	NA	NA	NA	CSGALNACT1	94581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	19522969	19523285	19523139	Y	NA	NA	NA	NA	NA	NA	CSGALNACT1	90255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	20064190	20064507	20064297	Y	ATP6V1B2	ATP6V1B2	NA	NA	NA	NA	ATP6V1B2	11312	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	20125746	20125979	20125927	Y	NA	LZTS1	DOK2,XPO7,ATP6V1B2,LZTS1	IMR90	Hi-C	24141950	LZTS1	33495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	20126353	20126692	20126612	Y	NA	LZTS1	DOK2,XPO7,ATP6V1B2,LZTS1	IMR90	Hi-C	24141950	LZTS1	32782	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	21775759	21776194	21775973	Y	PHYHIP,DOK2,NPM2	XPO7	NA	NA	NA	NA	XPO7	579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr8	21804083	21804253	21804128	Y	NA	XPO7	NA	NA	NA	NA	XPO7	28903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr8	21867707	21867918	21867811	Y	PHYHIP,LGI3,EPB49,EPB49,NPM2	NPM2	NA	NA	NA	NA	NPM2	11718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.773602519753977
chr8	21999982	22000221	22000101	Y	POLR3D	NUDT18,HR,REEP4,BMP1	NA	NA	NA	NA	REEP4	2518	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	22222955	22223268	22223121	Y	EPB49,SLC39A14,SLC39A14	SLC39A14	NA	NA	NA	NA	SLC39A14	193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.793155947874876
chr8	22227261	22227593	22227504	Y	SLC39A14,SLC39A14	SLC39A14	NA	NA	NA	NA	SLC39A14	4499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	22240884	22241560	22241218	Y	C8orf58	SLC39A14	NA	NA	NA	NA	SLC39A14	18122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	22408271	22408447	22408337	Y	NA	PDLIM2	NA	NA	NA	NA	PDLIM2	25345	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	22410101	22410594	22410364	Y	EPB49,LGI3,PHYHIP,RHOBTB2,RHOBTB2,EGR3,EGR3,SORBS3	PDLIM2	NA	NA	NA	NA	PDLIM2	23198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	22468597	22468907	22468752	Y	TNFRSF10C,EGR3,PDLIM2,PDLIM2,BIN3	PDLIM2	NA	NA	NA	NA	PDLIM2	34805	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	22469003	22469432	22469219	Y	NA	PDLIM2	NA	NA	NA	NA	PDLIM2	35211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	22522684	22522941	22522886	Y	NA	BIN3,EGR3	NA	NA	NA	NA	BIN3	1720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	22551843	22553123	22552848	Y	PPP3CC,PDLIM2,PDLIM2,BIN3,TNFRSF10C,EGR3	BIN3,EGR3	NA	NA	NA	NA	EGR3	3028	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr8	22561043	22561327	22561142	Y	PPP3CC,PDLIM2,BIN3,TNFRSF10B,EGR3	BIN3,EGR3	NA	NA	NA	NA	EGR3	12228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	22840134	22840430	22840185	Y	BIN3,TNFRSF10B	RHOBTB2	BIN3,TNFRSF10B,RHOBTB2,PEBP4,C8orf58,KIAA1967,LOC286059	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RHOBTB2	2500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	22855581	22855914	22855756	Y	EGR3,EGR3,EGR3	RHOBTB2	NA	NA	NA	NA	RHOBTB2	12651	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	23014689	23015093	23014900	Y	NA	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	4450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	23016406	23016568	23016458	Y	ENTPD4,ENTPD4,BIN3,TNFRSF10C	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	2975	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	23020215	23020436	23020325	Y	NA	TNFRSF10D	NA	NA	NA	NA	TNFRSF10D	672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	23210314	23210863	23210698	Y	NA	NA	NA	NA	NA	NA	LOXL2	69978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	23390028	23390384	23390041	Y	TNFRSF10B,TNFRSF10C,ENTPD4,ENTPD4	SLC25A37	NA	NA	NA	NA	SLC25A37	5710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	23397982	23398147	23398067	Y	TNFRSF10B,ENTPD4,ENTPD4	SLC25A37	NA	NA	NA	NA	SLC25A37	13664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	23411826	23412031	23411908	Y	TNFRSF10B,ENTPD4,ENTPD4	SLC25A37,RNU4-71P	NA	NA	NA	NA	SLC25A37	27508	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	24998434	24998750	24998494	Y	NA	DOCK5	NA	NA	NA	NA	DOCK5	41488	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	25059177	25059384	25059268	Y	DOCK5	DOCK5	NA	NA	NA	NA	DOCK5	18939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	25133664	25134104	25133793	Y	NA	NA	NA	NA	NA	NA	DOCK5	93426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	25186094	25186253	25186181	Y	NA	NA	NA	NA	NA	NA	KCTD9	127739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	25242857	25243137	25242939	Y	NA	NA	KCTD9	IMR90	Hi-C	24141950	KCTD9	70855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	25348135	25348483	25348309	Y	CDCA2	KCTD9,CDCA2	NA	NA	NA	NA	CDCA2	33622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	25356816	25356840	25356828	Y	NA	KCTD9,CDCA2	NA	NA	NA	NA	CDCA2	42303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	26008929	26009154	26009015	Y	NA	NA	PPP2R2A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	PPP2R2A	137853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	26124778	26124900	26124838	Y	PPP2R2A	PPP2R2A	PPP2R2A	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP2R2A	22107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	26306627	26307336	26307213	Y	NA	NA	BNIP3L,KCTD9,CDCA2,PPP2R2A,DPYSL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DPYSL2	62455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	26429509	26429959	26429867	Y	NA	NA	NA	NA	NA	NA	DPYSL2	59718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	26436602	26437074	26436866	Y	PNMA2,DPYSL2	NA	NA	NA	NA	NA	DPYSL2	66811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	26437404	26437761	26437433	Y	PNMA2,DPYSL2,DPYSL2	NA	NA	NA	NA	NA	DPYSL2	67613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr8	26498541	26498935	26498595	Y	NA	NA	NA	NA	NA	NA	RP11-384C12.1	128372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	27192227	27192436	27192262	Y	PTK2B,PTK2B	TRIM35	NA	NA	NA	NA	TRIM35	25391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	27200806	27201031	27200919	Y	PTK2B,PTK2B	TRIM35	NA	NA	NA	NA	TRIM35	33970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	27209291	27209793	27209526	Y	PTK2B,PTK2B	TRIM35	NA	NA	NA	NA	TRIM35	42455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	27219305	27219672	27219420	Y	PTK2B,PTK2B	NA	NA	NA	NA	NA	TRIM35	52469	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.078887079062201
chr8	27219743	27220043	27219778	Y	PTK2B,PTK2B	NA	NA	NA	NA	NA	TRIM35	52907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr8	27221120	27221544	27221428	Y	PTK2B,PTK2B	NA	NA	NA	NA	NA	TRIM35	54284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	27223958	27224492	27224191	Y	PTK2B,PTK2B	NA	NA	NA	NA	NA	TRIM35	57122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	27474556	27474730	27474657	Y	NA	CLU,SCARA3	SCARA3,TRIM35,CLU,CCDC25,ESCO2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	CLU	4008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	27630770	27631068	27630863	Y	NA	ESCO2,CCDC25	NA	NA	NA	NA	CCDC25	2600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.306679960522312
chr8	27694349	27694720	27694534	Y	NA	PBK	NA	NA	NA	NA	PBK	737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	28269273	28269920	28269515	Y	ZNF395	ZNF395	NA	NA	NA	NA	ZNF395	11055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.246032040416152
chr8	28569820	28569970	28569874	Y	ZNF395,FZD3,EXTL3	EXTL3-AS1	NA	NA	NA	NA	EXTL3-AS1	12839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	29097584	29097960	29097935	Y	HMBOX1,HMBOX1,KIF13B	KIF13B	NA	NA	NA	NA	KIF13B	20681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	29595040	29595214	29595121	Y	KIF13B,DUSP4,DUSP4,TMEM66,LEPROTL1	NA	NA	NA	NA	NA	TMEM66	343509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr8	29630716	29630847	29630782	Y	NA	NA	C8orf75,LOC286135	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEM66	307876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	29631359	29631483	29631421	Y	DUSP4	NA	C8orf75,LOC286135	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEM66	307240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	29758918	29759047	29759036	Y	NA	NA	DUSP4,LOC286135,C8orf75	IMR90	Hi-C	24141950	TMEM66	179676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	29848421	29848809	29848732	Y	MBOAT4	NA	DUSP4,C8orf75	IMR90	Hi-C	24141950	TMEM66	89914	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	29938783	29938843	29938811	Y	NA	TMEM66,LEPROTL1,RPS15AP24	NA	NA	NA	NA	TMEM66	60	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	29957112	29957836	29957408	Y	TMEM66,LEPROTL1	TMEM66,LEPROTL1,RPS15AP24,MBOAT4	NA	NA	NA	NA	LEPROTL1	6198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr8	30015593	30015700	30015665	Y	NA	RPS15AP24,MBOAT4,DCTN6	NA	NA	NA	NA	DCTN6	3780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr8	30262933	30263230	30262977	Y	NA	RBPMS,RBPMS-AS1	NA	NA	NA	NA	RBPMS-AS1	22016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	30273402	30273800	30273435	Y	NA	RBPMS,RBPMS-AS1	NA	NA	NA	NA	RBPMS-AS1	32485	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	30358644	30358942	30358767	Y	NA	NA	NA	NA	NA	NA	RBPMS-AS1	117727	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.88888843942553
chr8	30363851	30364149	30364000	Y	NA	NA	NA	NA	NA	NA	RBPMS-AS1	122934	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	30435369	30435466	30435408	Y	NA	NA	NA	NA	NA	NA	GTF2E2	78302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	30462940	30463157	30463081	Y	NA	NA	NA	NA	NA	NA	GTF2E2	50611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	30506010	30506203	30506101	Y	NA	GTF2E2	NA	NA	NA	NA	GTF2E2	7565	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	30580467	30580796	30580574	Y	GSR	GSR,UBXN8	NA	NA	NA	NA	GSR	2647	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr8	30769723	30770025	30769859	Y	NA	NA	TEX15,WRN,PPP2CB,PURG	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PPP2CB	99893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.588870123361022
chr8	30892240	30892587	30892393	Y	UBXN8	PURG,WRN	NA	NA	NA	NA	WRN	2923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.158928329544497
chr8	30892930	30893420	30892948	Y	NA	PURG,WRN	NA	NA	NA	NA	WRN	3613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	33245630	33245874	33245728	Y	NA	NA	NA	NA	NA	NA	FUT10	83066	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	33431884	33432209	33432046	Y	NA	RNF122	NA	NA	NA	NA	RNF122	9241	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	35382808	35383133	35382968	Y	NA	LSM12P1	NA	NA	NA	NA	LSM12P1	1527	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.00736483431752
chr8	36441429	36441454	36441442	Y	NA	NA	NA	NA	NA	NA	RP11-150O12.1	968247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	37133368	37133442	37133405	Y	NA	NA	ERLIN2,ZNF703	IMR90	Hi-C	24141950	RP11-150O12.1	276259	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	37372940	37373020	37372980	Y	NA	RP11-150O12.1	KCNU1	IMR90	Hi-C	24141950	RP11-150O12.1	36681	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	37441737	37441968	37441843	Y	NA	RP11-150O12.1,RP11-150O12.3	ZNF703	MCF7	ChIA-PET	22265404	RP11-150O12.3	13408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	37446897	37447170	37447094	Y	ZNF703	RP11-150O12.1,RP11-150O12.3	ZNF703	MCF7	ChIA-PET	22265404	RP11-150O12.3	8206	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	37448492	37448795	37448657	Y	RAB11FIP1,ZNF703	RP11-150O12.1,RP11-150O12.3	ZNF703	MCF7	ChIA-PET	22265404	RP11-150O12.3	6581	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	37532791	37533173	37533002	Y	NA	ZNF703	NA	NA	NA	NA	ZNF703	18096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	37749222	37749683	37749580	Y	WHSC1L1,LETM2,LETM2,RAB11FIP1	BRF2,RAB11FIP1	NA	NA	NA	NA	RAB11FIP1	5302	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	37751458	37752024	37751766	Y	NA	BRF2,RAB11FIP1	NA	NA	NA	NA	RAB11FIP1	2961	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	37754518	37754975	37754800	Y	NA	BRF2,RAB11FIP1	NA	NA	NA	NA	RAB11FIP1	10	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	37757888	37758317	37758017	Y	WHSC1L1,RAB11FIP1	RAB11FIP1	NA	NA	NA	NA	RAB11FIP1	2903	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	37760968	37761285	37761070	Y	RAB11FIP1	RAB11FIP1	RAB11FIP1	MCF7,K562	ChIA-PET	22265404	RAB11FIP1	5983	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	37761676	37761790	37761689	Y	NA	RAB11FIP1	RAB11FIP1	MCF7,K562	ChIA-PET	22265404	RAB11FIP1	6691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	37889292	37889604	37889448	Y	NA	EIF4EBP1	NA	NA	NA	NA	EIF4EBP1	3433	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	37961561	37961954	37961758	Y	NA	ASH2L,STAR	NA	NA	NA	NA	ASH2L	801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr8	38009325	38009705	38009661	Y	NA	ASH2L,STAR,BAG4,LSM1	NA	NA	NA	NA	STAR	2542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	38035023	38035257	38035173	Y	WHSC1L1,LETM2,LETM2,BAG4	STAR,BAG4,LSM1,DDHD2	NA	NA	NA	NA	LSM1	2775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr8	38160807	38161004	38160956	Y	NA	PPAPDC1B	NA	NA	NA	NA	PPAPDC1B	36046	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	38262735	38263237	38262894	Y	TACC1,PLEKHA2,C8orf86	WHSC1L1,LETM2	NA	NA	NA	NA	LETM2	21010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	38312135	38312514	38312441	Y	NA	FGFR1	NA	NA	NA	NA	FGFR1	11838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.211519715585964
chr8	38313401	38313535	38313485	Y	NA	FGFR1	NA	NA	NA	NA	FGFR1	10817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.225324440875159
chr8	38404543	38404848	38404696	Y	FGFR1	NA	FGFR1,C8orf86,RNF5P1	IMR90	Hi-C	24141950	RNF5P1	51870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	38422408	38422610	38422509	Y	NA	RNF5P1	LETM2,FGFR1,C8orf86,RNF5P1	IMR90	Hi-C	24141950	RNF5P1	34108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	38523213	38523472	38523342	Y	C8orf86	NA	C8orf86,FGFR1,WHSC1L1,RNF5P1,PPAPDC1B	IMR90	Hi-C	24141950	RNF5P1	66495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	38624356	38624716	38624649	Y	WHSC1L1,LETM2,LETM2,PLEKHA2,TACC1	NA	NA	NA	NA	NA	PLEKHA2	132037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	38628365	38628436	38628401	Y	TACC1	NA	NA	NA	NA	NA	PLEKHA2	128317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	38770998	38771507	38771224	Y	NA	PLEKHA2	NA	NA	NA	NA	PLEKHA2	14245	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	38856419	38857534	38856583	Y	NA	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	4031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr8	38862169	38862388	38862283	Y	NA	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	9781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	38867572	38867594	38867583	Y	C8orf86	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	15184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	38895649	38895937	38895811	Y	TACC1,PLEKHA2,HTRA4	TM2D2,ADAM9	NA	NA	NA	NA	ADAM9	43261	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	39912317	39912749	39912459	Y	C8orf4	NA	C8orf4,ZMAT4	IMR90	Hi-C	24141950	C8orf4	96240	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.380801589097357
chr8	39918999	39919284	39919148	Y	C8orf4	NA	C8orf4,ZMAT4	IMR90	Hi-C	24141950	C8orf4	89705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264933744620015
chr8	39976615	39976841	39976744	Y	IDO1	C8orf4	C8orf4	IMR90	Hi-C	24141950	C8orf4	32148	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.25671711281056
chr8	40016557	40016909	40016733	Y	NA	C8orf4	NA	NA	NA	NA	C8orf4	7568	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	40032102	40032537	40032342	Y	IDO1	C8orf4	NA	NA	NA	NA	C8orf4	23113	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.81764574555848
chr8	40207660	40208018	40207838	Y	NA	NA	ZMAT4	IMR90	Hi-C	24141950	C8orf4	198671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	41649689	41649828	41649744	Y	NKX6-3	NA	NA	NA	NA	NA	RP11-360L9.4	215802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr8	41733569	41733873	41733722	Y	NA	NA	NA	NA	NA	NA	KAT6A	173635	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	41886687	41887061	41886965	Y	NA	KAT6A	NA	NA	NA	NA	KAT6A	20447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	41997279	41998522	41997937	Y	NA	AP3M2	KAT6A,ANK1,POLB,AP3M2,VDAC3	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	AP3M2	9942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr8	42053833	42054135	42053951	Y	NA	AP3M2,PLAT	NA	NA	NA	NA	PLAT	9107	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	42270426	42270603	42270558	Y	NA	DKK4,VDAC3	NA	NA	NA	NA	VDAC3	23284	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr8	42356471	42356680	42356560	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	38389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	42370484	42370865	42370805	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	24204	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	42377318	42377512	42377415	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	17557	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	42398083	42398473	42398470	Y	NA	SLC20A2	NA	NA	NA	NA	SLC20A2	3014	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.763900188096917
chr8	47885401	47885427	47885415	Y	NA	NA	NA	NA	NA	NA	RPL10AP2	181314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	48242793	48242802	48242797	Y	NA	NA	PRKDC	IMR90	Hi-C	24141950	NDUFA5P12	168300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	48350721	48350922	48350822	Y	NA	NA	NA	NA	NA	NA	RP11-697N18.2	152249	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr8	48424795	48425379	48425168	Y	NA	NA	NA	NA	NA	NA	RP11-697N18.2	77792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	48531592	48531742	48531667	Y	NA	RP11-697N18.2	NA	NA	NA	NA	RP11-697N18.2	28421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	49175738	49176128	49175933	Y	NA	NA	SNAI2,MCM4	IMR90	Hi-C	24141950	RPL29P19	119022	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.283012805831294
chr8	49426952	49427328	49427172	Y	SNAI2	NA	SNAI2	IMR90	Hi-C	24141950	RPL29P19	131802	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	49494192	49494425	49494282	Y	NA	NA	SNAI2,EFCAB1	IMR90	Hi-C	24141950	RPL29P19	199042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	50653553	50653944	50653741	Y	NA	NA	NA	NA	NA	NA	SNAI2	821254	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	52747281	52747589	52747434	Y	NA	NA	NA	NA	NA	NA	PCMTD1	62146	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	52809491	52809887	52809877	Y	PCMTD1	NA	NA	NA	NA	NA	PCMTD1,RP11-110G21.1	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	53188453	53188874	53188470	Y	NA	NA	NA	NA	NA	NA	ST18	182645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	53607875	53608327	53608179	Y	RB1CC1	RB1CC1	NA	NA	NA	NA	RB1CC1	48076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	53625473	53626379	53625848	Y	RB1CC1	RB1CC1	NA	NA	NA	NA	RB1CC1	30024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr8	54414943	54415096	54415020	Y	NA	NA	NA	NA	NA	NA	RP11-463C14.1	208161	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	54658367	54658716	54658684	Y	NA	RP11-463C14.1	NA	NA	NA	NA	RP11-463C14.1	35110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	54798731	54798762	54798749	Y	NA	ATP6V1H,RGS20	NA	NA	NA	NA	RGS20	36363	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	54884977	54885679	54885327	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	47410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.199028747854426
chr8	54932125	54932445	54932251	Y	NA	TCEA1	NA	NA	NA	NA	TCEA1	644	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	55018716	55018874	55018809	Y	ATP6V1H,ATP6V1H	LYPLA1,MRPL15	LYPLA1	K562,MCF7	ChIA-PET	22265404	LYPLA1	6139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	55088607	55088824	55088716	Y	NA	MRPL15	NA	NA	NA	NA	MRPL15	42837	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	55366813	55366957	55366864	Y	NA	NA	SOX17	K562	ChIA-PET	22265404	MRPL15	321043	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	56362318	56362387	56362358	Y	NA	NA	NA	NA	NA	NA	TGS1	321314	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	56684291	56684685	56684461	Y	NA	TGS1,TMEM68	NA	NA	NA	NA	TMEM68	325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	56831577	56831790	56831640	Y	NA	LYN	NA	NA	NA	NA	LYN	41205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	57389900	57390701	57390447	Y	NA	NA	NA	NA	NA	NA	RP11-17A4.1	108243	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr8	59470194	59470547	59470220	Y	NA	SDCBP	NA	NA	NA	NA	SDCBP	6711	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	59476129	59476409	59476167	Y	NA	SDCBP	NA	NA	NA	NA	SDCBP	12646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	61511489	61511770	61511631	Y	NA	NA	NA	NA	NA	NA	CHD7	77567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	61564243	61564650	61564285	Y	CA8,CHD7	CHD7	CHD7,RAB2A	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	CHD7	24687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr8	61592861	61593584	61592948	Y	NA	CHD7	NA	NA	NA	NA	CHD7	3524	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chr8	61626654	61626933	61626781	Y	NA	CHD7	NA	NA	NA	NA	CHD7	37317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	61627150	61627529	61627187	Y	NA	CHD7	NA	NA	NA	NA	CHD7	37813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	61657043	61657068	61657053	Y	CHD7	NA	NA	NA	NA	NA	CHD7	67706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr8	61660299	61660611	61660357	Y	CHD7	NA	NA	NA	NA	NA	CHD7	70962	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	61850490	61850754	61850677	Y	NA	NA	CHD7	IMR90	Hi-C	24141950	CHD7	261153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.757980566189665
chr8	61850776	61851191	61851141	Y	NA	NA	CHD7	IMR90	Hi-C	24141950	CHD7	261439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.347272005004515
chr8	62427686	62427987	62427837	Y	NA	NA	NA	NA	NA	NA	ASPH	197168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	62445230	62445580	62445420	Y	CLVS1,ASPH	NA	NA	NA	NA	NA	ASPH	179575	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr8	62566892	62567143	62567071	Y	NA	NA	NA	NA	NA	NA	ASPH	58012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	62606389	62606706	62606619	Y	NA	ASPH,MIR4470	NA	NA	NA	NA	ASPH	18449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr8	62620817	62621622	62621526	Y	NA	ASPH,MIR4470	NA	NA	NA	NA	ASPH	3533	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	62624516	62625412	62625017	Y	ASPH	NA	NA	NA	NA	NA	ASPH,MIR4470	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	62634023	62634407	62634126	Y	NA	ASPH,MIR4470	NA	NA	NA	NA	MIR4470	8676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	62679636	62680132	62679874	Y	NA	NA	ASPH,MIR4470	K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	MIR4470	54289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr8	63776641	63776831	63776733	Y	NA	NA	NA	NA	NA	NA	GGH	172899	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.271013464272029
chr8	63934936	63935021	63934979	Y	NA	GGH	NA	NA	NA	NA	GGH	14709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr8	63945359	63945546	63945425	Y	YTHDF3	GGH	NA	NA	NA	NA	GGH	4184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	64082499	64082747	64082682	Y	YTHDF3	YTHDF3	NA	NA	NA	NA	YTHDF3	3387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	66615323	66615688	66615531	Y	NA	NA	NA	NA	NA	NA	MTFR1	60354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.132632636523763
chr8	66641187	66641625	66641410	Y	PDE7A	NA	NA	NA	NA	NA	MTFR1	86218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	66738971	66739362	66739211	Y	NA	PDE7A	NA	NA	NA	NA	PDE7A	13195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	67032130	67032353	67032272	Y	NA	AC084082.3	NA	NA	NA	NA	AC084082.3	9228	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	67035997	67036639	67036283	Y	NA	AC084082.3	NA	NA	NA	NA	AC084082.3	13095	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	67626224	67626609	67626278	Y	SGK3,VCPIP1,SGK3	VCPIP1,C8orf44,SGK3	NA	NA	NA	NA	SGK3	3571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	67668655	67668834	67668702	Y	ADHFE1,SGK3,SGK3	SGK3,PTTG3P	NA	NA	NA	NA	PTTG3P	9406	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	67699786	67700084	67699891	Y	VCPIP1,SGK3,SGK3	PTTG3P	NA	NA	NA	NA	PTTG3P	21546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	68075038	68075412	68075329	Y	NA	NA	NA	NA	NA	NA	COPS5	81020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	68090392	68090564	68090531	Y	NA	NA	NA	NA	NA	NA	COPS5	96374	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	68097028	68097398	68097213	Y	NA	NA	NA	NA	NA	NA	COPS5	103010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	68098646	68098899	68098873	Y	NA	NA	NA	NA	NA	NA	COPS5	104628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	68147841	68148210	68148008	Y	NA	NA	NA	NA	NA	NA	ARFGEF1	105702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	70042378	70042779	70042585	Y	NA	NA	NA	NA	NA	NA	SLCO5A1	702520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	71031909	71031920	71031915	Y	NA	RNU1-101P,RP11-152C15.1	NA	NA	NA	NA	RP11-152C15.1	17495	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	71124105	71124438	71124275	Y	NA	NA	NA	NA	NA	NA	RP11-152C15.1	109691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	71503238	71503393	71503365	Y	NA	TRAM1	NA	NA	NA	NA	TRAM1	15229	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	71569342	71569635	71569535	Y	NA	LACTB2,XKR9	NA	NA	NA	NA	LACTB2	9774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	73008234	73008433	73008334	Y	NA	NA	TRPA1,LOC100132891	IMR90	Hi-C	24141950	RP11-1102P16.1	505974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	73559096	73559368	73559359	Y	KCNB2	NA	NA	NA	NA	NA	TERF1	359731	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	73690966	73691186	73691160	Y	NA	NA	NA	NA	NA	NA	TERF1	227913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	74792402	74792821	74792506	Y	NA	UBE2W,GYG1P1	NA	NA	NA	NA	UBE2W	3257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr8	75418171	75418548	75418360	Y	NA	NA	NA	NA	NA	NA	RP11-730G20.2	95931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	75515244	75515546	75515314	Y	NA	RP11-730G20.2	NA	NA	NA	NA	RP11-730G20.2	765	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	77493765	77494075	77493820	Y	NA	NA	NA	NA	NA	NA	ZFHX4	97379	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	77515612	77515766	77515691	Y	NA	NA	NA	NA	NA	NA	ZFHX4	75688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	79674578	79674862	79674701	Y	NA	IL7	NA	NA	NA	NA	IL7	40896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.264111101627431
chr8	79675234	79675631	79675433	Y	NA	IL7	NA	NA	NA	NA	IL7	40127	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	79762134	79762468	79762223	Y	IL7	IL7	NA	NA	NA	NA	IL7	46376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	80680806	80681178	80681064	Y	HEY1	HEY1	NA	NA	NA	NA	HEY1	2708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr8	80705910	80706255	80706054	Y	HEY1	HEY1	HEY1,MRPS28	IMR90	Hi-C	24141950	HEY1	27812	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	80996547	80996769	80996670	Y	TPD52	NA	NA	NA	NA	NA	MRPS28	56023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	81015641	81015664	81015650	Y	ZBTB10	NA	NA	NA	NA	NA	MRPS28	75117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	81034251	81034528	81034390	Y	ZBTB10,TPD52	NA	NA	NA	NA	NA	MRPS28	93727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	81035979	81036376	81036336	Y	NA	NA	NA	NA	NA	NA	MRPS28	95455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	81400222	81400395	81400296	Y	ZBTB10	ZBTB10	NA	NA	NA	NA	ZBTB10	4368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	81489520	81489653	81489606	Y	NA	NA	ZBTB10	MCF7	ChIA-PET	22265404	ZBTB10	93666	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	81782792	81783006	81782996	Y	ZBTB10,ZNF704	NA	NA	NA	NA	NA	PAG1	239297	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr8	81838400	81838664	81838614	Y	NA	NA	ZNF704	IMR90	Hi-C	24141950	PAG1	183639	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr8	81938706	81938999	81938911	Y	PAG1	NA	NA	NA	NA	NA	PAG1	83304	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	82167350	82167604	82167486	Y	NA	FABP5,RP11-363E6.3	ZNF704,PAG1,FABP12	IMR90	Hi-C	24141950	FABP5	22994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	87444767	87445117	87444942	Y	WWP1	CPNE3	NA	NA	NA	NA	CPNE3	49942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	87475103	87475472	87475288	Y	NA	CPNE3,SLC2A3P4	NA	NA	NA	NA	CPNE3	19587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	87484005	87484360	87484214	Y	NA	CPNE3,SLC2A3P4	NA	NA	NA	NA	CPNE3	10699	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	87673960	87674305	87674138	Y	CNGB3	NA	NA	NA	NA	NA	SLC2A3P4	160140	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	90776453	90776674	90776498	Y	OSGIN2,RIPK2	RP11-37B2.1,RIPK2	NA	NA	NA	NA	RIPK2	8478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	90787257	90787620	90787439	Y	OSGIN2,RIPK2	RP11-37B2.1,RIPK2	NA	NA	NA	NA	RIPK2	19282	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	90849173	90849652	90849503	Y	RIPK2,OSGIN2	NA	OSGIN2,NBN,RIPK2,DECR1	IMR90	Hi-C	24141950	OSGIN2	62435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	90987349	90987665	90987516	Y	RIPK2,OSGIN2	DECR1,NBN	NA	NA	NA	NA	DECR1	23968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	92112003	92112264	92112167	Y	NA	GS1-251I9.4,OTUD6B	NA	NA	NA	NA	OTUD6B	31579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	92128196	92128480	92128215	Y	NA	GS1-251I9.4,OTUD6B	NA	NA	NA	NA	OTUD6B	47772	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	94698311	94698521	94698416	Y	NA	FAM92A1,LINC00535	NA	NA	NA	NA	FAM92A1	10268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	95003706	95004122	95004001	Y	NA	NA	LINC00535,RBM12B,RAD54B,CDH17,GEM	IMR90	Hi-C	24141950	PDP1	135671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	95254172	95254606	95254439	Y	GEM	KB-1247B1.1,CDH17,GEM	CDH17	IMR90	Hi-C	24141950	GEM	17972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	95429933	95430227	95430143	Y	NA	NA	NA	NA	NA	NA	RAD54B	55110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	96146998	96147210	96147103	Y	TP53INP1,PLEKHF2	PLEKHF2	NA	NA	NA	NA	PLEKHF2	2966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.130164195938811
chr8	97272793	97273157	97272974	Y	NA	UQCRB,MTERFD1,PTDSS1	NA	NA	NA	NA	PTDSS1	850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	97350195	97350563	97350444	Y	NA	NA	NA	NA	NA	NA	PTDSS1	78252	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	97603579	97603744	97603662	Y	NA	NA	NA	NA	NA	NA	SDC2	100000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.701286274908864
chr8	97873455	97873860	97873757	Y	PGCP	NA	NA	NA	NA	NA	SDC2	369876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	98108598	98108998	98108990	Y	NA	NA	NA	NA	NA	NA	MTDH	545409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	98843865	98843962	98843914	Y	NA	RPS23P1,MATN2	NA	NA	NA	NA	RPS23P1	31320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	98865970	98866240	98866105	Y	NA	RPS23P1,MATN2	NA	NA	NA	NA	RPS23P1	9042	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	99485745	99486120	99486088	Y	NA	NA	NA	NA	NA	NA	NIPAL2	181124	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	99658802	99659210	99659171	Y	NA	NA	NA	NA	NA	NA	STK3	293845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	99952283	99952358	99952318	Y	OSR2	STK3,OSR2	NA	NA	NA	NA	STK3	697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chr8	99953302	99954000	99953407	Y	STK3,OSR2	STK3,OSR2	NA	NA	NA	NA	STK3	247	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.430764436809109
chr8	101338082	101338542	101338349	Y	SPAG1,SPAG1,RNF19A	RNF19A	SPAG1,ANKRD46,RNF19A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNF19A	7904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	101385316	101385524	101385421	Y	NA	RNF19A	MIR4471	IMR90	Hi-C	24141950	RNF19A	38870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	101427912	101428321	101428112	Y	SPAG1,SPAG1,RNF19A,RNF19A	NA	SPAG1,RNF19A,ANKRD46,MIR4471	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	KB-1615E4.2	57582	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	101486265	101486558	101486389	Y	SPAG1,SPAG1,RNF19A	KB-1615E4.2	SPAG1,RNF19A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KB-1615E4.2	362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.354505896076623
chr8	101500158	101500422	101500292	Y	NA	KB-1615E4.2	RNF19A,GRHL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KB-1615E4.2	14255	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	101502356	101502514	101502451	Y	SPAG1,SPAG1	KB-1615E4.2	RNF19A,GRHL2,SPAG1,ANKRD46	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	KB-1615E4.2	16453	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	101514609	101515240	101514976	Y	YWHAZ,YWHAZ,YWHAZ,YWHAZ,SPAG1,RNF19A,RNF19A	KB-1615E4.2	NA	NA	NA	NA	KB-1615E4.2	28706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	101731045	101731633	101731441	Y	NA	PABPC1	NA	NA	NA	NA	PABPC1	1404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr8	101920209	101920392	101920320	Y	PABPC1,ZNF706,ZNF706,YWHAZ,YWHAZ	YWHAZ	NA	NA	NA	NA	YWHAZ	43224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	101920723	101921107	101920870	Y	NA	YWHAZ	NA	NA	NA	NA	YWHAZ	42509	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	102161878	102162231	102162054	Y	NA	NA	FLJ42969,YWHAZ,ZNF706	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZNF706	54190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	102171133	102171473	102171263	Y	PABPC1,YWHAZ,YWHAZ,ZNF706,ZNF706	ZNF706	ZNF706,YWHAZ,FLJ42969	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF706	44948	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	102236579	102236726	102236653	Y	NA	ZNF706	FLJ42969,ZNF706,YWHAZ	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	ZNF706	20158	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	103249003	103249378	103249091	Y	UBR5,KLF10,RRM2B,RRM2B	KB-431C1.4	NA	NA	NA	NA	RRM2B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	103401606	103401938	103401841	Y	NA	UBR5	NA	NA	NA	NA	UBR5	21131	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	103411260	103411483	103411351	Y	UBR5	UBR5	NA	NA	NA	NA	UBR5	11586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	103422542	103423104	103422992	Y	NA	NA	NA	NA	NA	NA	UBR5	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	103669513	103669869	103669680	Y	AZIN1,ATP6V1C1,KLF10,KLF10	KLF10	NA	NA	NA	NA	KLF10	3383	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr8	103743323	103743460	103743418	Y	NA	NA	KLF10	IMR90	Hi-C	24141950	KB-1732A1.1	72285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chr8	103757592	103757997	103757773	Y	NA	NA	KLF10,UBR5	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1732A1.1	57748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	103801151	103801773	103801337	Y	NA	KB-1732A1.1	KLF10,UBR5,ODF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KB-1732A1.1	13972	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr8	103822630	103823284	103823186	Y	NA	KB-1732A1.1	NA	NA	NA	NA	KB-1732A1.1	6885	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr8	103858397	103858789	103858587	Y	NA	KB-1732A1.1,KB-1507C5.2,AZIN1	NA	NA	NA	NA	KB-1507C5.2	15739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	103918538	103918841	103918687	Y	NA	KB-1507C5.2,AZIN1	ATP6V1C1,AZIN1	IMR90	Hi-C	24141950	AZIN1	14446	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	104038342	104038540	104038441	Y	NA	ATP6V1C1,KB-1639H6.2	NA	NA	NA	NA	KB-1639H6.2	6686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	104059632	104059708	104059689	Y	NA	ATP6V1C1,KB-1639H6.2	NA	NA	NA	NA	KB-1639H6.2	27976	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.217107809065704
chr8	104331705	104332089	104331783	Y	RIMS2	FZD6,RP11-318M2.2,CTHRC1	NA	NA	NA	NA	RP11-318M2.2	22705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	107633742	107634133	107633852	Y	OXR1	NA	NA	NA	NA	NA	TAGLN2P1	74108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	107735956	107736285	107736121	Y	NA	TAGLN2P1	NA	NA	NA	NA	TAGLN2P1	27715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	108452941	108453080	108453009	Y	NA	NA	NA	NA	NA	NA	TAGLN2P1	744700	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	109222483	109222836	109222544	Y	NA	NA	NA	NA	NA	NA	EIF3E	222726	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	109230205	109230491	109230349	Y	NA	NA	NA	NA	NA	NA	EIF3E	215071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	109230729	109230920	109230833	Y	NA	NA	NA	NA	NA	NA	EIF3E	214642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	110248064	110248088	110248074	Y	NA	NA	NA	NA	NA	NA	ENY2	96465	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr8	110602225	110602239	110602235	Y	SYBU,SYBU,SYBU,SYBU,SYBU,SYBU,KCNV1	NA	NA	NA	NA	NA	EBAG9	52285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	110647152	110647483	110647459	Y	NA	NA	NA	NA	NA	NA	SYBU	54537	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	115322659	115322858	115322759	Y	NA	NA	NA	NA	NA	NA	RP11-709P2.1	935761	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	116988617	116988643	116988632	Y	NA	NA	NA	NA	NA	NA	UTP23	788099	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	117484091	117484236	117484201	Y	C8orf85	NA	NA	NA	NA	NA	UTP23	292506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	117711370	117711748	117711590	Y	NA	NA	NA	NA	NA	NA	UTP23	64994	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	117744101	117744355	117744228	Y	NA	UTP23,EIF3H	NA	NA	NA	NA	UTP23	32387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	117889939	117890223	117890034	Y	RAD21	MIR3610,RAD21	NA	NA	NA	NA	RAD21	4834	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	118040478	118040807	118040576	Y	SLC30A8,SLC30A8,SLC30A8	NA	NA	NA	NA	NA	RAD21	155373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	118743302	118743393	118743321	Y	NA	NA	EXT1,MED30,SAMD12	IMR90	Hi-C	24141950	MED30	212350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr8	118958698	118959000	118958912	Y	NA	NA	NA	NA	NA	NA	EXT1	163092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20543999593395
chr8	119068312	119068746	119068717	Y	NA	NA	NA	NA	NA	NA	EXT1	53346	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	119303956	119304407	119304075	Y	NA	NA	NA	NA	NA	NA	EXT1	181864	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr8	120232000	120232286	120232044	Y	NA	NA	NA	NA	NA	NA	MAL2	56727	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	120593887	120594019	120593985	Y	NA	NA	NA	NA	NA	NA	ENPP2	89674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	121442839	121443137	121442988	Y	NA	MTBP,MRPL13	NA	NA	NA	NA	MTBP	12503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	121456351	121456697	121456524	Y	SNTB1,MTBP,MRPL13	MTBP,MRPL13	NA	NA	NA	NA	MRPL13	709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	121619256	121619602	121619580	Y	NA	NA	NA	NA	NA	NA	MRPL13	163614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	121628287	121628559	121628462	Y	NA	NA	NA	NA	NA	NA	MRPL13	172645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr8	121649803	121649981	121649892	Y	NA	NA	NA	NA	NA	NA	SNTB1	173532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	121702901	121703232	121703165	Y	NA	NA	NA	NA	NA	NA	SNTB1	120281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.253265931488261
chr8	121718841	121719032	121718948	Y	NA	NA	NA	NA	NA	NA	SNTB1	104481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	121737162	121737328	121737239	Y	NA	NA	NA	NA	NA	NA	SNTB1	86185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	121798029	121798317	121798256	Y	NA	SNTB1	NA	NA	NA	NA	SNTB1	25196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	121809679	121809816	121809747	Y	NA	SNTB1	NA	NA	NA	NA	SNTB1	13697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	121815954	121816374	121816244	Y	SNTB1	SNTB1	NA	NA	NA	NA	SNTB1	7139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	121821026	121821194	121821110	Y	SNTB1	SNTB1	NA	NA	NA	NA	SNTB1	2319	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	121822442	121823157	121823030	Y	NA	SNTB1	NA	NA	NA	NA	SNTB1	356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr8	121839869	121840146	121840008	Y	NA	SNTB1	SNTB1	IMR90	Hi-C	24141950	SNTB1	16356	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.20223004440565
chr8	121873597	121873929	121873801	Y	NA	RP11-369K17.1	SNTB1,MRPL13,MTBP	IMR90	Hi-C	24141950	RP11-369K17.1	49376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr8	122361097	122361402	122361250	Y	NA	NA	HAS2	IMR90	Hi-C	24141950	RP11-369K17.1	437792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.349740445589467
chr8	122755244	122755615	122755430	Y	NA	NA	NA	NA	NA	NA	RP11-369K17.1	831939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	123795111	123795992	123795667	Y	C8orf76,ZHX2	ZHX2	NA	NA	NA	NA	ZHX2	3478	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr8	123801301	123801636	123801353	Y	ZHX2	ZHX2	NA	NA	NA	NA	ZHX2	9668	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	123845065	123845251	123845073	Y	NA	NA	NA	NA	NA	NA	ZHX2	53432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr8	123882951	123883328	123883140	Y	NA	NA	NA	NA	NA	NA	ZHX2	91318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	123883965	123883977	123883971	Y	NA	NA	NA	NA	NA	NA	ZHX2	92332	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	123908169	123908483	123908299	Y	NA	NA	NA	NA	NA	NA	ZHX2	116536	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr8	124166912	124167054	124166991	Y	FBXO32	NA	NA	NA	NA	NA	C8orf76	84584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	124179869	124179997	124179932	Y	NA	NA	NA	NA	NA	NA	C8orf76	71641	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr8	124248679	124249062	124248866	Y	NA	C8orf76,ZHX1	NA	NA	NA	NA	C8orf76	2576	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.311445411009469
chr8	124301303	124301534	124301414	Y	NA	C8orf76,ZHX1	ATAD2,ZHX1-C8ORF76	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ZHX1	15522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr8	124337288	124337362	124337325	Y	NA	NA	NA	NA	NA	NA	ZHX1	51507	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	124407044	124407322	124407183	Y	NA	ATAD2,WDYHV1	NA	NA	NA	NA	ATAD2	19268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	124407455	124407786	124407574	Y	FAM91A1,C8orf76,ZHX1,ATAD2	ATAD2,WDYHV1	NA	NA	NA	NA	ATAD2	18804	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr8	124462485	124463022	124462596	Y	NA	ATAD2,WDYHV1	NA	NA	NA	NA	WDYHV1	35520	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	124478396	124478824	124478461	Y	NA	NA	FBXO32,ANXA13,FAM91A1	IMR90	Hi-C	24141950	WDYHV1	51431	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	124524433	124524792	124524749	Y	FBXO32,FBXO32	FBXO32	NA	NA	NA	NA	FBXO32	26654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	124934433	124934622	124934528	Y	NA	NA	NA	NA	NA	NA	FAM91A1	155737	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	125341304	125341312	125341308	Y	NA	TMEM65	NA	NA	NA	NA	TMEM65	41621	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	125382714	125382961	125382953	Y	NA	NA	NA	NA	NA	NA	TMEM65	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	125513273	125513673	125513472	Y	NA	RNF139-AS1,RNF139,NDUFB9,TATDN1	NA	NA	NA	NA	RNF139	28294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	125642565	125642695	125642641	Y	NSMCE2,KIAA0196,RNF139,MTSS1	NA	NA	NA	NA	NA	TATDN1	92866	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	125646597	125646950	125646829	Y	NA	NA	NA	NA	NA	NA	MTSS1	91780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr8	125649664	125650232	125649981	Y	ZNF572,RNF139	NA	NA	NA	NA	NA	MTSS1	88498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	125683699	125684014	125683857	Y	NA	NA	NA	NA	NA	NA	MTSS1	54716	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	125784373	125784835	125784614	Y	ZNF572,NSMCE2,KIAA0196,RNF139,MTSS1	MTSS1,RP11-1082L8.4	MTSS1,NDUFB9,ZNF572	IMR90	Hi-C	24141950	RP11-1082L8.4	41089	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.234032698856888
chr8	125933537	125933598	125933569	Y	NA	ZNF572	MTSS1,TATDN1,NDUFB9	IMR90	Hi-C	24141950	ZNF572	49942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	125984707	125984742	125984718	Y	ZNF572	ZNF572,SQLE	NA	NA	NA	NA	ZNF572	1167	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.403646100795792
chr8	126037665	126038021	126037843	Y	NA	SQLE	NA	NA	NA	NA	SQLE	28926	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	126195292	126195668	126195512	Y	TRIB1,KIAA0196,NSMCE2	NA	TRIB1	IMR90	Hi-C	24141950	KIAA0196	93210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	126231490	126231859	126231657	Y	MTSS1,KIAA0196,NSMCE2,TRIB1	NA	NA	NA	NA	NA	KIAA0196	129408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.180458572078074
chr8	126232175	126232753	126232302	Y	MTSS1,KIAA0196,NSMCE2,TRIB1	NA	NA	NA	NA	NA	KIAA0196	130093	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.125398745451655
chr8	126268557	126268681	126268622	Y	NA	NA	NA	NA	NA	NA	KIAA0196	166475	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	126286229	126286368	126286299	Y	KIAA0196,NSMCE2,TRIB1	NA	NA	NA	NA	NA	TRIB1	154195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	126290719	126290948	126290836	Y	NA	NA	NA	NA	NA	NA	TRIB1	149615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	126296437	126296656	126296547	Y	NA	NA	NA	NA	NA	NA	TRIB1	143907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	126365187	126365461	126365226	Y	NA	NA	NA	NA	NA	NA	TRIB1	75102	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	126372255	126372562	126372409	Y	NA	NA	NA	NA	NA	NA	TRIB1	68001	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	126441416	126441734	126441625	Y	KIAA0196,NSMCE2,TRIB1	TRIB1	NA	NA	NA	NA	TRIB1	853	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.566025611662587
chr8	126446642	126447323	126446973	Y	KIAA0196,NSMCE2,TRIB1	TRIB1	NA	NA	NA	NA	TRIB1	6079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	126518421	126518590	126518541	Y	KIAA0196,NSMCE2,TRIB1	NA	KIAA0196,NSMCE2,TRIB1	IMR90	Hi-C	24141950	TRIB1	77858	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	126522249	126522478	126522331	Y	KIAA0196,NSMCE2,TRIB1	NA	KIAA0196,NSMCE2,TRIB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TRIB1	81686	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.320976311983781
chr8	126524478	126524839	126524833	Y	NA	NA	KIAA0196,NSMCE2,TRIB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TRIB1	83915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	126525260	126525748	126525427	Y	KIAA0196,NSMCE2,TRIB1	NA	KIAA0196,NSMCE2,TRIB1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TRIB1	84697	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr8	126710957	126711330	126711190	Y	TRIB1	NA	NSMCE2,TRIB1,KIAA0196	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TRIB1	270394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	126961175	126961554	126961350	Y	NA	NA	NA	NA	NA	NA	TRIB1	520612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	127950397	127950550	127950437	Y	NA	NA	NA	NA	NA	NA	CCAT1	278783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	128099457	128099542	128099514	Y	NA	NA	NA	NA	NA	NA	CCAT1	129791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.26756228294973
chr8	128171088	128171312	128171255	Y	NA	NA	PCAT1,POU5F1B,LOC727677	IMR90	Hi-C	24141950	CCAT1	58021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	128176067	128176333	128176204	Y	NA	NA	PCAT1,POU5F1B,LOC727677,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CCAT1	53000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128179610	128179821	128179807	Y	NA	CCAT1	PCAT1,POU5F1B,LOC727677	IMR90	Hi-C	24141950	CCAT1	49512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	128180134	128180587	128180334	Y	NA	CCAT1	PCAT1,POU5F1B,LOC727677	IMR90	Hi-C	24141950	CCAT1	48746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr8	128182729	128182789	128182759	Y	NA	CCAT1	PCAT1,POU5F1B,LOC727677	IMR90	Hi-C	24141950	CCAT1	46544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	128185119	128185731	128185383	Y	NA	CCAT1	NA	NA	NA	NA	CCAT1	43602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	128196669	128197128	128196955	Y	NA	CCAT1	NA	NA	NA	NA	CCAT1	32205	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128203137	128203490	128203390	Y	NA	CCAT1	NA	NA	NA	NA	CCAT1	25843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	128208934	128209645	128209301	Y	NA	CCAT1	LOC727677,MYC	IMR90	Hi-C	24141950	CCAT1	19688	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	128218099	128218752	128218687	Y	NA	CCAT1	LOC727677,MYC	IMR90	Hi-C	24141950	CCAT1	10581	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.14979875610894
chr8	128219153	128219489	128219426	Y	NA	CCAT1	LOC727677,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CCAT1	9844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr8	128227053	128227754	128227491	Y	NA	CCAT1	LOC727677,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CCAT1	1579	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.369133775965603
chr8	128227982	128228299	128228180	Y	NA	CCAT1	LOC727677,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	CCAT1	1034	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr8	128237300	128237732	128237515	Y	NA	CCAT1	LOC727677,MYC,PVT1	IMR90	Hi-C	24141950	CCAT1	7967	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128413471	128413778	128413602	Y	MYC	NA	LOC727677	IMR90	Hi-C	24141950	CCAT1	184138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	128811691	128811973	128811933	Y	NA	PVT1	NA	NA	NA	NA	PVT1	6912	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	128821272	128821652	128821500	Y	MYC	PVT1	NA	NA	NA	NA	PVT1	16493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128825013	128825274	128825028	Y	MYC	PVT1	NA	NA	NA	NA	PVT1	20234	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	128835085	128835527	128835341	Y	NA	PVT1	NA	NA	NA	NA	PVT1	30306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128843918	128844302	128844002	Y	NA	PVT1	NA	NA	NA	NA	PVT1	39139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128919831	128920544	128920233	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	100313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	128926432	128926732	128926619	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	94125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	128930937	128931257	128931067	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	89600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.172733054833692
chr8	129053712	129054462	129054053	Y	NA	RNU4-25P	NA	NA	NA	NA	RNU4-25P	32855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	129062971	129063389	129063062	Y	NA	RNU4-25P	NA	NA	NA	NA	RNU4-25P	42114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	129180047	129180432	129180183	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	159190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	129180743	129180870	129180780	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	159886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.162379510866795
chr8	129188825	129189407	129189075	Y	NA	NA	MYC,PVT1	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	167968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.295172245135321
chr8	129209230	129209523	129209417	Y	NA	NA	PVT1,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	188373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr8	129339245	129339624	129339435	Y	NA	NA	PVT1,MYC	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RNU4-25P	318388	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	129370322	129370485	129370393	Y	NA	NA	NA	NA	NA	NA	RNU4-25P	349465	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.17527180613709
chr8	129397787	129398025	129397906	Y	NA	NA	MYC	IMR90	Hi-C	24141950	RNU4-25P	376930	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	129527030	129527320	129527153	Y	NA	NA	PVT1,MYC	IMR90	Hi-C	24141950	RNU4-25P	506173	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr8	129539101	129539374	129539248	Y	NA	NA	PVT1	IMR90	Hi-C	24141950	RNU4-25P	518244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	129569050	129569202	129569118	Y	NA	NA	MYC,PVT1	IMR90	Hi-C	24141950	RNU4-25P	548193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.721993874449858
chr8	129614909	129615287	129615035	Y	NA	NA	MYC	IMR90	Hi-C	24141950	RNU4-25P	594052	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.79569418757107
chr8	129659601	129660006	129659683	Y	NA	NA	MYC	MCF7	ChIA-PET	22265404	RNU4-25P	638744	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	130284402	130285105	130284786	Y	NA	NA	NA	NA	NA	NA	FAM49B	742270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	131089372	131089764	131089568	Y	NA	NA	NA	NA	NA	NA	FAM49B	61997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	131114299	131114376	131114317	Y	NA	NA	NA	NA	NA	NA	FAM49B	86924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	131291188	131291588	131291505	Y	NA	NA	NA	NA	NA	NA	ASAP1	162318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	131296023	131296343	131296248	Y	NA	NA	NA	NA	NA	NA	ASAP1	157563	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	131454495	131454885	131454765	Y	NA	ASAP1	NA	NA	NA	NA	ASAP1	589	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr8	131495645	131495684	131495664	Y	NA	ASAP1	ASAP1	IMR90	Hi-C	24141950	ASAP1	41739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	133562041	133562364	133562205	Y	HHLA1,KCNQ3,KCNQ3	NA	NA	NA	NA	NA	LRRC6	123474	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	133846055	133846325	133846220	Y	NA	NA	NA	NA	NA	NA	PHF20L1	60437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	133847494	133847990	133847686	Y	NA	NA	NA	NA	NA	NA	PHF20L1	61876	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	133964232	133964569	133964404	Y	NA	NA	NA	NA	NA	NA	PHF20L1	178614	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	134258134	134258466	134258300	Y	PHF20L1,NDRG1	NA	NA	NA	NA	NA	NDRG1	53799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	134387761	134388081	134387916	Y	NA	ST13P6	TG,WISP1,NDRG1,PHF20L1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ST13P6	30168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.268876552114587
chr8	134510785	134510981	134510865	Y	SLA	NA	NA	NA	NA	NA	ST3GAL1	71202	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	134552406	134552812	134552641	Y	ST3GAL1	ST3GAL1	NA	NA	NA	NA	ST3GAL1	29371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr8	134580779	134581429	134580915	Y	ST3GAL1	ST3GAL1	NA	NA	NA	NA	ST3GAL1	754	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr8	134592913	134593176	134593079	Y	ST3GAL1	ST3GAL1	ST3GAL1,ZFAT	IMR90	Hi-C	24141950	ST3GAL1	10730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr8	134699077	134699376	134699146	Y	NA	NA	ST3GAL1	IMR90	Hi-C	24141950	ST3GAL1	116894	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	135493726	135493930	135493821	Y	NA	NA	NA	NA	NA	NA	ZFAT	229362	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	135519293	135519998	135519930	Y	NA	NA	NA	NA	NA	NA	ZFAT	203294	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	135628946	135629314	135629008	Y	NA	NA	NA	NA	NA	NA	ZFAT	93978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	135637758	135638024	135637881	Y	NA	NA	NA	NA	NA	NA	ZFAT	85268	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	135697258	135697603	135697427	Y	NA	ZFAT	NA	NA	NA	NA	ZFAT	25689	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	135843585	135843751	135843688	Y	ZFAT	MIR30D	ZFAT,MIR30D,MIR30B	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	MIR30D	28397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr8	136476552	136476867	136476709	Y	NA	KHDRBS3	NA	NA	NA	NA	KHDRBS3	8852	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	137308696	137309144	137308876	Y	NA	NA	NA	NA	NA	NA	RP11-149P24.1	251432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	140115684	140115926	140115805	Y	NA	NA	NA	NA	NA	NA	KCNK9	597373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	141057159	141057398	141057253	Y	KCNK9	NA	NA	NA	NA	NA	KCNK9	343860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	141108529	141108796	141108710	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	357882	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.01798876257776
chr8	141108929	141109987	141109387	Y	KCNK9,TRAPPC9	NA	NA	NA	NA	NA	TRAPPC9	356691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.960300397621629
chr8	141190446	141190798	141190723	Y	NA	NA	NA	NA	NA	NA	TRAPPC9	275880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	141454964	141454973	141454969	Y	NA	TRAPPC9	NA	NA	NA	NA	TRAPPC9	11705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	141474376	141475403	141474918	Y	NA	TRAPPC9,CHRAC1	TRAPPC9,EIF2C2,CHRAC1	K562,MCF7	ChIA-PET	22265404	TRAPPC9	7698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr8	141598802	141599709	141599120	Y	TRAPPC9,CHRAC1,EIF2C2	NA	NA	NA	NA	NA	CHRAC1	79405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr8	141604721	141605198	141605144	Y	EIF2C2	NA	NA	NA	NA	NA	CHRAC1	85324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr8	141608422	141608817	141608788	Y	NA	NA	NA	NA	NA	NA	CHRAC1	89025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	141707505	141707982	141707957	Y	NA	NA	NA	NA	NA	NA	CHRAC1	188108	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	141849368	141849592	141849371	Y	TRAPPC9	NA	NA	NA	NA	NA	PTK2	160723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	141886994	141887102	141887066	Y	PTK2	NA	NA	NA	NA	NA	PTK2	123213	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr8	142106680	142106937	142106833	Y	EIF2C2,SLC45A4,DENND3	DENND3	PTK2,DENND3	IMR90	Hi-C	24141950	DENND3	18440	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr8	142129714	142130013	142129874	Y	EIF2C2,SLC45A4,DENND3	DENND3	PTK2,DENND3,SLC45A4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DENND3	4337	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	142289630	142289814	142289772	Y	NA	NA	SLC45A4,PTK2	IMR90	Hi-C	24141950	PTP4A3	110279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	142411426	142411896	142411690	Y	DENND3,SLC45A4,PTP4A3	PTP4A3	PTP4A3,FLJ43860	IMR90	Hi-C	24141950	PTP4A3	11333	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.76026892111479
chr8	142412543	142413026	142412776	Y	DENND3,SLC45A4	PTP4A3	PTP4A3,FLJ43860	IMR90	Hi-C	24141950	PTP4A3	12450	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr8	142413850	142414371	142414167	Y	DENND3,SLC45A4	PTP4A3	PTP4A3,FLJ43860	IMR90	Hi-C	24141950	PTP4A3	13757	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	142425618	142425919	142425790	Y	NA	PTP4A3,HNRNPA1P38	NA	NA	NA	NA	PTP4A3	25525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	143353648	143353818	143353814	Y	TSNARE1,BAI1	NA	NA	NA	NA	NA	TSNARE1	128783	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr8	143449565	143449834	143449726	Y	TSNARE1	TSNARE1	NA	NA	NA	NA	TSNARE1	32767	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	143533998	143534621	143534303	Y	LYNX1,LYNX1,TSNARE1,BAI1	NA	BAI1,TSNARE1	MCF7	ChIA-PET	22265404	TSNARE1	51397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr8	143809767	143809928	143809818	Y	C8orf55	JRK,LYPD2,RP11-706C16.7,LYNX1	NA	NA	NA	NA	LYPD2	22024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr8	143897219	143897551	143897306	Y	LY6E,GLI4	LYNX1,LY6D	LY6D,LYNX1,PSCA,JRK,C8orf55,LOC100288181,SLURP1,LY6E,LOC100133669	MCF7	ChIA-PET	22265404	LY6D	31211	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr8	144094701	144094997	144094860	Y	LY6K,C8orf55	LY6E,C8orf31	NA	NA	NA	NA	LY6E	2402	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.420079364414702
chr8	144328155	144328364	144328211	Y	NA	ZFP41,GLI4,RP13-582O9.5,ZNF696	NA	NA	NA	NA	ZFP41	875	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	144360422	144361034	144360946	Y	ZNF707,LY6E,ZC3H3,TSTA3,TIGD5,PYCRL,NAPRT1,EEF1D,EEF1D,ZFP41,GLI4,TOP1MT	ZFP41,GLI4,RP13-582O9.5,ZNF696	NA	NA	NA	NA	RP13-582O9.5	826	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.633735992158107
chr8	144601495	144601753	144601594	Y	NA	ZC3H3,GSDMD	NA	NA	NA	NA	ZC3H3	19870	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.58801781426188
chr8	144609980	144610203	144610126	Y	NA	ZC3H3,GSDMD	NA	NA	NA	NA	ZC3H3	11420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.991201443384755
chr8	144629463	144629732	144629564	Y	SPATC1,GRINA	ZC3H3,GSDMD,TIGD5,EEF1D	NA	NA	NA	NA	GSDMD	3645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	144684263	144684410	144684337	Y	NA	TIGD5,EEF1D,PYCRL,TSTA3,ZNF623	NA	NA	NA	NA	EEF1D	4552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	144843026	144843252	144843141	Y	NA	FAM83H	SCRIB,PUF60	IMR90	Hi-C	24141950	FAM83H	29055	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	144948428	144948782	144948624	Y	EPPK1	PUF60,NRBP2,EPPK1	NRBP2	IMR90	Hi-C	24141950	EPPK1	1850	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr8	144959402	144959607	144959478	Y	C8orf73,MAPK15,EPPK1	PUF60,NRBP2,EPPK1	PLEC,NRBP2,PUF60	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	EPPK1	8770	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.309308498852027
chr8	145002494	145002937	145002709	Y	SPATC1,PLEC	NA	NA	NA	NA	NA	EPPK1	51862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.334289922707903
chr8	145025737	145026802	145026365	Y	ZC3H3,GSDMD,NAPRT1,EEF1D,SPATC1,PLEC,PARP10	GRINA	NA	NA	NA	NA	GRINA	35424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chr8	145030645	145030911	145030698	Y	NA	GRINA	NA	NA	NA	NA	GRINA	31315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr8	145118322	145118976	145118932	Y	LOC100130274,SPATC1	PARP10,OPLAH,EXOSC4,CTD-3065J16.9,GPAA1,CYC1,MAF1,SHARPIN	NA	NA	NA	NA	OPLAH	1587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr8	145549095	145549459	145549304	Y	NA	BOP1,HSF1,DGAT1,FBXL6,ADCK5	NA	NA	NA	NA	DGAT1	522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.118004756634783
chr8	145909522	145909717	145909620	Y	NA	ARHGAP39	ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr8	145909879	145909957	145909931	Y	SCRT1,KIFC2,LRRC24,ARHGAP39,ZNF517,ZNF34	ARHGAP39	ARHGAP39,ZNF251,ZNF7,C8orf77,ZNF252,TMED10P1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	685	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr8	145911932	145912089	145912059	Y	SCRT1,KIFC2,LRRC24,ZNF34	ARHGAP39	ARHGAP39,ZNF251,ZNF34	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ARHGAP39	2738	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr8	146010487	146010786	146010731	Y	NA	ZNF251,RPL8,ZNF7	NA	NA	NA	NA	ZNF34	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr8	146047058	146047297	146047178	Y	ZNF34	ZNF34,RPL8,ZNF7,COMMD5	NA	NA	NA	NA	ZNF7	3552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr8	146125688	146125902	146125777	Y	ZNF250	COMMD5,ZNF250,ZNF16	NA	NA	NA	NA	ZNF250	135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	211500	211823	211657	Y	NA	DOCK8	NA	NA	NA	NA	DOCK8	1031	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	614528	614756	614656	Y	DOCK8,C9orf66,KANK1	NA	NA	NA	NA	NA	KANK1	146237	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	677967	678108	678032	Y	DOCK8,C9orf66,KANK1	NA	NA	NA	NA	NA	KANK1	209676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr9	683421	683495	683457	Y	NA	NA	NA	NA	NA	NA	KANK1	215130	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.275778914759185
chr9	708345	708423	708359	Y	KANK1	NA	NA	NA	NA	NA	KANK1	240054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr9	708443	708758	708711	Y	KANK1	NA	NA	NA	NA	NA	KANK1	240152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr9	755797	756516	755921	Y	NA	NA	NA	NA	NA	NA	KANK1	287506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	2018040	2018611	2018274	Y	SMARCA2	SMARCA2	NA	NA	NA	NA	SMARCA2	4698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	2241944	2242239	2242031	Y	NA	NA	NA	NA	NA	NA	SMARCA2	228602	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	2623377	2623723	2623671	Y	NA	VLDLR	NA	NA	NA	NA	VLDLR	3543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	2839342	2839735	2839533	Y	NA	KIAA0020	NA	NA	NA	NA	KIAA0020	2506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	2875811	2876206	2875956	Y	NA	KIAA0020	NA	NA	NA	NA	KIAA0020	33570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr9	3450123	3450354	3450276	Y	NA	NA	NA	NA	NA	NA	RFX3	73650	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	3470131	3470258	3470195	Y	NA	NA	NA	NA	NA	NA	RFX3	53746	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	3507863	3508210	3507917	Y	RFX3	RFX3,RP11-509J21.1	NA	NA	NA	NA	RFX3	15794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	3508264	3508975	3508586	Y	RFX3	RFX3,RP11-509J21.1	NA	NA	NA	NA	RFX3	15029	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	4544914	4545090	4545003	Y	NA	NA	NA	NA	NA	NA	PPAPDC2	115208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	4656742	4656927	4656747	Y	PPAPDC2,CDC37L1,C9orf68	PPAPDC2,CDC37L1	NA	NA	NA	NA	PPAPDC2	3371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	4715214	4715412	4715290	Y	AK3	CDC37L1,AK3	NA	NA	NA	NA	AK3	24631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	4738592	4738723	4738708	Y	NA	AK3	NA	NA	NA	NA	AK3	1320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29862342645762
chr9	4829866	4830028	4829909	Y	NA	RCL1,MIR101-2	NA	NA	NA	NA	MIR101-2	18263	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	5086081	5086478	5086137	Y	CD274,CDC37L1,INSL6,JAK2	RP11-39K24.14	NA	NA	NA	NA	RP11-39K24.14	9863	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr9	5269155	5269233	5269193	Y	NA	NA	C9orf46	IMR90	Hi-C	24141950	RP11-39K24.14	172814	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	5583347	5583481	5583453	Y	NA	KIAA1432	NA	NA	NA	NA	KIAA1432	43544	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	5777401	5777564	5777483	Y	NA	NA	NA	NA	NA	NA	ERMP1	53553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	5843832	5844207	5843936	Y	NA	ERMP1	ERMP1	IMR90	Hi-C	24141950	ERMP1	12715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.299937695622477
chr9	5844710	5844756	5844733	Y	RANBP6	ERMP1	ERMP1	IMR90	Hi-C	24141950	ERMP1	13593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	5893266	5893397	5893330	Y	MLANA	NA	NA	NA	NA	NA	ERMP1	62149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	5965964	5966267	5966115	Y	NA	KIAA2026,RANBP6	NA	NA	NA	NA	KIAA2026	39634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	6239142	6239327	6239254	Y	IL33	NA	NA	NA	NA	NA	UHRF2	171824	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.206754265098808
chr9	6488249	6488567	6488283	Y	NA	NA	NA	NA	NA	NA	UHRF2	77098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr9	6564380	6564534	6564488	Y	NA	NA	NA	NA	NA	NA	RP11-106A1.2	72605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	6680895	6681975	6681336	Y	UHRF2,KDM4C	RP11-106A1.2,GLDC,RP11-390F4.6,KDM4C	KDM4C,UHRF2,GLDC	K562,MCF7	ChIA-PET	22265404	KDM4C	36888	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.58819789992172
chr9	6788210	6788382	6788241	Y	NA	NA	NA	NA	NA	NA	KDM4C	69347	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.42746469825449
chr9	11065025	11065362	11065124	Y	NA	NA	NA	NA	NA	NA	RP11-3L8.3	1746982	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr9	12779203	12779569	12779249	Y	NA	RP11-3L8.3	NA	NA	NA	NA	RP11-3L8.3	32775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	12784417	12784967	12784682	Y	C9orf150	RP11-3L8.3	NA	NA	NA	NA	RP11-3L8.3	27377	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	13237438	13237544	13237492	Y	NA	MPDZ	NA	NA	NA	NA	MPDZ	40045	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	13278024	13278458	13278161	Y	NA	MPDZ	NFIB	IMR90	Hi-C	24141950	MPDZ	435	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	14316018	14316353	14316263	Y	NFIB	NA	NA	NA	NA	NA	NFIB	80629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	14322295	14322910	14322674	Y	ZDHHC21,NFIB	NA	NA	NA	NA	NA	NFIB	74072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.240774963756723
chr9	14350875	14351111	14350996	Y	NA	NFIB	NA	NA	NA	NA	NFIB	45871	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	15300887	15301166	15301002	Y	TTC39B	TTC39B	NA	NA	NA	NA	TTC39B	4192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	15306066	15306408	15306119	Y	NA	TTC39B	NA	NA	NA	NA	TTC39B	708	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	15477137	15477463	15477300	Y	NA	PSIP1,FTH1P12	NA	NA	NA	NA	PSIP1	31554	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	18718417	18718817	18718751	Y	NA	NA	NA	NA	NA	NA	RP11-296P7.4	306073	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.101239964588362
chr9	19124098	19124309	19124196	Y	ACER2,PLIN2	HAUS6,PLIN2	NA	NA	NA	NA	PLIN2	22979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr9	19154059	19154539	19154234	Y	PLIN2	PLIN2	HAUS6,PLIN2,DENND4C	IMR90	Hi-C	24141950	PLIN2	6771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr9	19161675	19162031	19161810	Y	PLIN2,ACER2	PLIN2	DENND4C,PLIN2,HAUS6	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	PLIN2	14387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr9	19184256	19184894	19184463	Y	PLIN2	PLIN2	HAUS6,ACER2,DENND4C,PLIN2	IMR90	Hi-C	24141950	PLIN2	36968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	20532398	20532530	20532463	Y	MLLT3	NA	NA	NA	NA	NA	MLLT3	88012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr9	21695810	21696232	21696052	Y	NA	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	104310	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.355820165241481
chr9	21696521	21696698	21696606	Y	IFNA6,IFNA1	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	103844	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.281698536666436
chr9	21696721	21697113	21696912	Y	IFNA8	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	103429	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.103868502918077
chr9	21699320	21699393	21699347	Y	NA	NA	MIR31HG	IMR90	Hi-C	24141950	MTAP	101149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	21809706	21810111	21809856	Y	NA	MTAP	NA	NA	NA	NA	MTAP	9164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	21836477	21836868	21836612	Y	NA	MTAP	NA	NA	NA	NA	MTAP	35935	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	21901395	21901428	21901412	Y	IFNA8,IFNA1	NA	NA	NA	NA	NA	CDKN2A	91872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	22117547	22117648	22117588	Y	NA	NA	NA	NA	NA	NA	UBA52P6	107393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	22148170	22148538	22148388	Y	NA	NA	MTAP,CDKN2B-AS1,CDKN2B,CDKN2A	IMR90	Hi-C	24141950	UBA52P6	138016	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	22240757	22240884	22240825	Y	NA	NA	MTAP,CDKN2B-AS1,CDKN2A,C9orf53,CDKN2B	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DMRTA1	203956	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	22815363	22815696	22815663	Y	NA	NA	NA	NA	NA	NA	DMRTA1	370523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	23850835	23851256	23851099	Y	NA	NA	NA	NA	NA	NA	DMRTA1	1405995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	26954235	26954527	26954290	Y	IFT74,IFT74	IFT74,PLAA	NA	NA	NA	NA	PLAA	8774	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	27564116	27564302	27564198	Y	C9orf72,C9orf72	MOB3B,C9orf72	NA	NA	NA	NA	C9orf72	7562	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	29825337	29825639	29825488	Y	NA	NA	NA	NA	NA	NA	RBMXP2	861464	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	29826048	29826378	29826215	Y	NA	NA	NA	NA	NA	NA	RBMXP2	860725	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	29826427	29826586	29826507	Y	NA	NA	NA	NA	NA	NA	RBMXP2	860517	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	31790390	31790408	31790400	Y	NA	NA	NA	NA	NA	NA	ACO1	592210	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	31966420	31966696	31966558	Y	NA	NA	NA	NA	NA	NA	ACO1	415922	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	32004800	32005157	32005020	Y	NA	NA	NA	NA	NA	NA	ACO1	377461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.423862074164511
chr9	32524178	32524624	32524592	Y	DDX58	TOPORS,NDUFB6	NA	NA	NA	NA	DDX58	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	32535412	32535514	32535462	Y	NA	DDX58,TOPORS,NDUFB6	NA	NA	NA	NA	DDX58	11090	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	33023891	33023961	33023926	Y	NA	APTX,DNAJA1	NA	NA	NA	NA	DNAJA1	682	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	33028063	33028460	33028077	Y	NA	APTX,DNAJA1,SMU1	NA	NA	NA	NA	DNAJA1	4854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr9	33162668	33163130	33162954	Y	DNAJA1,SMU1,NFX1,CHMP5,B4GALT1	B4GALT1	NA	NA	NA	NA	B4GALT1	2224	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	33165457	33166051	33165900	Y	DNAJA1,SMU1,NFX1,CHMP5,B4GALT1	B4GALT1	NA	NA	NA	NA	B4GALT1	103	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.531181758404888
chr9	33171235	33171390	33171286	Y	NA	B4GALT1,SPINK4	NA	NA	NA	NA	B4GALT1	5881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	33329062	33329543	33329355	Y	NA	NFX1	NA	NA	NA	NA	NFX1	40553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	33350411	33350624	33350531	Y	NA	NA	NA	NA	NA	NA	NFX1	61902	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	33446270	33446740	33446527	Y	SMU1,BAG1,NFX1,AQP3	AQP3,NOL6	NA	NA	NA	NA	AQP3	661	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	33814905	33815171	33814978	Y	UBE2R2,UBAP1	UBE2R2	NA	NA	NA	NA	UBE2R2	394	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	33931170	33931493	33931332	Y	UBAP1,UBE2R2	NA	NA	NA	NA	NA	UBAP2	115454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	33942829	33943199	33943013	Y	NA	NA	NA	NA	NA	NA	UBAP2	103748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	33953868	33954185	33954034	Y	UBE2R2,UBAP1	NA	NA	NA	NA	NA	UBAP2	92762	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	34016159	34016420	34016379	Y	NA	UBAP2	NA	NA	NA	NA	UBAP2	30527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	34124231	34124372	34124320	Y	NA	DCAF12	NA	NA	NA	NA	DCAF12	1025	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	34193349	34193568	34193460	Y	NA	UBAP1,AL353662.2,RP11-571F15.3	NA	NA	NA	NA	AL353662.2	74	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	34352304	34352500	34352353	Y	NA	SERPINH1P1,KIF24,NUDT2,KIAA1161,C9orf24	NA	NA	NA	NA	KIAA1161	22351	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.18522402256523
chr9	34375136	34375287	34375212	Y	NA	KIF24,NUDT2,KIAA1161,C9orf24	NA	NA	NA	NA	KIAA1161	285	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.124084476286797
chr9	34630475	34630583	34630561	Y	KIAA1161,GALT	DCTN3,SIGMAR1,GALT,IL11RA,RP11-195F19.9,RP11-195F19.5	NA	NA	NA	NA	SIGMAR1	5223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	34630838	34631031	34630927	Y	ENHO,CNTFR,CNTFR,KIAA1045,DNAJB5	DCTN3,SIGMAR1,GALT,IL11RA,RP11-195F19.9,RP11-195F19.5	NA	NA	NA	NA	SIGMAR1	4775	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	35490989	35491345	35491127	Y	NA	NA	NA	NA	NA	NA	FAM166B	70551	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	35492185	35492605	35492350	Y	RUSC2	NA	NA	NA	NA	NA	FAM166B	69291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	35516545	35516820	35516591	Y	NA	FAM166B	NA	NA	NA	NA	FAM166B	45076	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	35518041	35518590	35518314	Y	CREB3,VCP,STOML2,RUSC2	FAM166B	NA	NA	NA	NA	FAM166B	43306	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr9	35603992	35604628	35604112	Y	TMEM8B,TMEM8B,TMEM8B,SPAG8,GBA2,C9orf128,RUSC2	FAM166B,TESK1,SIT1	NA	NA	NA	NA	TESK1	625	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.49181368445403
chr9	35726275	35726587	35726326	Y	NA	CREB3,TLN1,RGP1,GBA2	NA	NA	NA	NA	CREB3	3745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr9	35769980	35770349	35770169	Y	NA	CREB3,TLN1,RGP1,GBA2,SPAG8,TMEM8B,HINT2	NA	NA	NA	NA	GBA2	21997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	35907858	35908401	35908282	Y	OR2S2,OR13J1,HRCT1	NDUFA5P4,HRCT1	NA	NA	NA	NA	HRCT1	3669	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	35971862	35972364	35972237	Y	NA	YBX1P10	C9orf128,HRCT1,LOC158376,FP588,RECK	IMR90	Hi-C	24141950	YBX1P10	1547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr9	36040345	36040403	36040371	Y	NA	RECK	NA	NA	NA	NA	RECK	5915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	36231547	36231666	36231607	Y	NA	CLTA,RNU4-53P,GNE	NA	NA	NA	NA	RNU4-53P	34114	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	36232002	36232125	36232063	Y	GNE	CLTA,RNU4-53P,GNE	NA	NA	NA	NA	RNU4-53P	33655	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	36621370	36621719	36621545	Y	NA	NA	NA	NA	NA	NA	MELK	50511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	36765862	36766252	36766147	Y	RNF38,RNF38	NA	MELK	IMR90	Hi-C	24141950	MELK	195003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.151694438472388
chr9	37036641	37037011	37036829	Y	ZCCHC7,ZBTB5,PAX5	NA	NA	NA	NA	NA	ZCCHC7	81525	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20543999593395
chr9	37198449	37198887	37198604	Y	ZBTB5,ZCCHC7	NA	NA	NA	NA	NA	ZCCHC7	79913	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr9	37773119	37773290	37773253	Y	FRMPD1	DCAF10,EXOSC3	NA	NA	NA	NA	DCAF10	25209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	37835930	37836292	37836154	Y	NA	DCAF10,EXOSC3	NA	NA	NA	NA	EXOSC3	36496	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chr9	37914600	37914735	37914730	Y	NA	NA	NA	NA	NA	NA	EXOSC3	115166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	37924173	37924321	37924247	Y	NA	NA	NA	NA	NA	NA	EXOSC3	124739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	37938183	37938323	37938277	Y	SHB	NA	NA	NA	NA	NA	RP11-613M10.9	128361	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	37963992	37964293	37964120	Y	NA	NA	NA	NA	NA	NA	RP11-613M10.9	102391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr9	38008217	38008489	38008387	Y	NA	NA	NA	NA	NA	NA	RP11-613M10.9	58195	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	38035956	38036107	38036020	Y	NA	RP11-613M10.9,SHB	NA	NA	NA	NA	RP11-613M10.9	30577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	38066980	38067628	38067261	Y	SHB	RP11-613M10.9	NA	NA	NA	NA	SHB	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chr9	38074399	38074817	38074731	Y	NA	RP11-613M10.9,SHB	DCAF10,MCART1,SHB	IMR90	Hi-C	24141950	SHB	7189	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	38437570	38437747	38437611	Y	NA	ALDH1B1,IGFBPL1	TOMM5,IGFBPL1,ALDH1B1	IMR90	Hi-C	24141950	IGFBPL1	15126	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.89915219636611
chr9	66471270	66471410	66471340	Y	NA	NA	LOC642236	IMR90	Hi-C	24141950	RP11-764K9.4	1981965	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	68377347	68377469	68377407	Y	NA	NA	NA	NA	NA	NA	RP11-764K9.4	75906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	68419808	68420298	68419990	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	33077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	68423908	68424365	68424207	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	29010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	68429583	68429926	68429755	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	23449	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr9	68436364	68436652	68436508	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	16723	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	68455261	68455556	68455421	Y	NA	RP11-764K9.4	NA	NA	NA	NA	RP11-764K9.4	1886	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.62625221631492
chr9	71413577	71413589	71413582	Y	NA	FAM122A	NA	NA	NA	NA	FAM122A	20613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	71476577	71476832	71476704	Y	NA	NA	NA	NA	NA	NA	FAM122A	83613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	71487093	71487366	71487280	Y	NA	NA	NA	NA	NA	NA	FAM122A	94129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	71634884	71635015	71634950	Y	PIP5K1B	FXN	NA	NA	NA	NA	FXN	13160	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	71728196	71728449	71728285	Y	NA	TJP2	NA	NA	NA	NA	TJP2	5760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	71734977	71735184	71735061	Y	NA	TJP2	NA	NA	NA	NA	TJP2	768	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	71789916	71790363	71790201	Y	TJP2	NA	NA	NA	NA	NA	TJP2	55707	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	71790550	71790929	71790586	Y	NA	NA	NA	NA	NA	NA	TJP2	56341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	71791709	71792066	71791753	Y	TJP2	NA	NA	NA	NA	NA	TJP2	57500	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	71793410	71793781	71793424	Y	NA	NA	NA	NA	NA	NA	TJP2	59201	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr9	71795556	71796114	71795819	Y	TJP2	NA	NA	NA	NA	NA	TJP2	61347	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr9	71825244	71825637	71825441	Y	NA	NA	NA	NA	NA	NA	TJP2	91035	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	72344996	72345326	72345161	Y	NA	PTAR1	NA	NA	NA	NA	PTAR1	27549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	72781786	72782158	72781853	Y	NA	NA	NA	NA	NA	NA	SMC5	89779	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	72801648	72801771	72801710	Y	MAMDC2	NA	NA	NA	NA	NA	SMC5	70166	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	72805213	72805492	72805447	Y	SMC5	NA	NA	NA	NA	NA	SMC5	66445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr9	72837972	72838313	72838181	Y	NA	SMC5	NA	NA	NA	NA	SMC5	33624	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr9	72871058	72871439	72871223	Y	NA	SMC5	NA	NA	NA	NA	SMC5	498	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	73021810	73022419	73022127	Y	NA	KLF9	NA	NA	NA	NA	KLF9	5121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	73025885	73026723	73026293	Y	KLF9	KLF9	NA	NA	NA	NA	KLF9	817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr9	73033763	73035382	73035076	Y	SMC5,KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	6223	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.07485397293411
chr9	73035561	73035945	73035863	Y	KLF9	KLF9	TRPM3,SMC5,LOC100507299,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	8021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.523787769588016
chr9	73036465	73036957	73036835	Y	KLF9	KLF9	TRPM3,KLF9	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	KLF9	8925	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	73085472	73085592	73085532	Y	NA	NA	TRPM3,SMC5,KLF9	IMR90	Hi-C	24141950	KLF9	57932	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	74292775	74292963	74292884	Y	TMEM2	NA	NA	NA	NA	NA	RPL35AP21	90258	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	74293239	74293379	74293310	Y	TMEM2	NA	NA	NA	NA	NA	RPL35AP21	90722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.346289264267168
chr9	74371995	74372048	74372016	Y	NA	NA	NA	NA	NA	NA	TMEM2	57558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0895721514566082
chr9	74511654	74511799	74511765	Y	NA	C9orf85	NA	NA	NA	NA	C9orf85	12627	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	74515794	74516103	74515949	Y	NA	C9orf85	NA	NA	NA	NA	C9orf85	8323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	75511457	75511847	75511682	Y	NA	NA	NA	NA	NA	NA	ALDH1A1	181511	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	75518800	75519107	75519099	Y	NA	NA	NA	NA	NA	NA	ALDH1A1	174251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	75549526	75549619	75549601	Y	NA	NA	NA	NA	NA	NA	ALDH1A1	143739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr9	75562890	75563230	75563163	Y	NA	NA	NA	NA	NA	NA	ALDH1A1	130128	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chr9	75612572	75612897	75612823	Y	NA	NA	ALDH1A1	IMR90	Hi-C	24141950	ALDH1A1	80461	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.711148704310688
chr9	76299237	76299618	76299309	Y	NA	NA	NA	NA	NA	NA	ANXA1	534564	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	77588894	77589149	77589022	Y	NA	RP11-197P3.1,C9orf40	NA	NA	NA	NA	C9orf40	23092	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	80548294	80548580	80548559	Y	NA	NA	NA	NA	NA	NA	GNAQ	95794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	80637884	80638322	80638164	Y	NA	GNAQ	NA	NA	NA	NA	GNAQ	6052	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	80911003	80911373	80911119	Y	PSAT1	PSAT1	NA	NA	NA	NA	PSAT1	944	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	81390215	81390602	81390491	Y	NA	NA	NA	NA	NA	NA	PSAT1	480156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	82185317	82185693	82185378	Y	NA	TLE4	NA	NA	NA	NA	TLE4	629	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	84270722	84271111	84271084	Y	NA	TLE1,RP11-154D17.1	NA	NA	NA	NA	TLE1	31109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	85888522	85888919	85888721	Y	NA	NA	NA	NA	NA	NA	RP11-439K3.1	56276	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chr9	86044941	86045010	86044976	Y	NA	NA	NA	NA	NA	NA	FRMD3	106451	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	86051693	86051979	86051837	Y	NA	NA	NA	NA	NA	NA	FRMD3	99482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr9	86238855	86239256	86239056	Y	UBQLN1,GKAP1	NA	NA	NA	NA	NA	RP11-522I20.3	81253	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr9	86239584	86239974	86239757	Y	NA	NA	NA	NA	NA	NA	RP11-522I20.3	80535	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	86271805	86271878	86271876	Y	NA	RP11-522I20.3,UBQLN1	NA	NA	NA	NA	RP11-522I20.3	48631	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	88358353	88358730	88358394	Y	AGTPBP1	AGTPBP1	NA	NA	NA	NA	AGTPBP1	3409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	89422548	89422732	89422697	Y	NA	NA	NA	NA	NA	NA	CDC20P1	201835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	89626902	89626982	89626949	Y	NA	CDC20P1	NA	NA	NA	NA	CDC20P1	2335	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr9	89699545	89699882	89699714	Y	NA	NA	NA	NA	NA	NA	CDC20P1	74978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	90117444	90117744	90117580	Y	DAPK1	DAPK1,RP11-40C6.2	NA	NA	NA	NA	DAPK1	7301	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	90169791	90170300	90170098	Y	DAPK1	RP11-40C6.2	NA	NA	NA	NA	RP11-40C6.2	31574	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	90196338	90197001	90196617	Y	NA	NA	NA	NA	NA	NA	RP11-40C6.2	58121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	90728260	90728622	90728394	Y	NA	NA	NA	NA	NA	NA	CDK20	140592	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	91795136	91795669	91795494	Y	C9orf47,SHC3	SHC3	NA	NA	NA	NA	SHC3	3454	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.490589713922685
chr9	91998036	91998395	91998345	Y	NA	NA	NA	NA	NA	NA	SECISBP2	66615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	92057683	92058183	92058056	Y	NA	NA	NA	NA	NA	NA	SEMA4D	52862	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	92171593	92171895	92171765	Y	NA	NA	SECISBP2,SEMA4D	IMR90	Hi-C	24141950	SEMA4D	60548	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.291229437640749
chr9	92515795	92516064	92515808	Y	NA	NA	NA	NA	NA	NA	SEMA4D	404750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	92754925	92755310	92755118	Y	NA	NA	NA	NA	NA	NA	SEMA4D	643880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	93754369	93754628	93754484	Y	NA	NA	AUH,ROR2,LOC100129316,NFIL3	IMR90	Hi-C	24141950	SYK	192300	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	93822540	93822977	93822872	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	SYK	260471	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	93823339	93823577	93823437	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	SYK	261270	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chr9	93833669	93833838	93833696	Y	NA	NA	NA	NA	NA	NA	SYK	271600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr9	93955243	93955725	93955362	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	AUH	166470	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.1790540042797
chr9	93955991	93956732	93956142	Y	NA	NA	NA	NA	NA	NA	AUH	165463	CAGE	HepG2 ENCODE	hg19	FANTOM5	4.59492017690648
chr9	93957941	93958089	93958015	Y	NA	NA	NA	NA	NA	NA	AUH	164106	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr9	93959484	93959867	93959681	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	AUH	162328	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr9	93960145	93960482	93960197	Y	SYK,SYK,NFIL3	NA	NA	NA	NA	NA	AUH	161713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chr9	93975322	93975401	93975365	Y	NA	NA	NA	NA	NA	NA	AUH	146794	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	94178668	94178865	94178761	Y	NFIL3	NFIL3	NA	NA	NA	NA	NFIL3	5279	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	94181531	94181930	94181720	Y	NFIL3	NFIL3	NA	NA	NA	NA	NFIL3	2214	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr9	94872861	94873095	94872978	Y	NA	SPTLC1	NA	NA	NA	NA	SPTLC1	2571	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	95383874	95384172	95384023	Y	NA	IPPK	NA	NA	NA	NA	IPPK	46375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	95388417	95388814	95388616	Y	FGD3,CENPP	IPPK	NA	NA	NA	NA	IPPK	41733	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	95452860	95453088	95452974	Y	NA	IPPK	NA	NA	NA	NA	IPPK	22313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	95732704	95733017	95732861	Y	NINJ1,C9orf89,FGD3	FGD3	NA	NA	NA	NA	FGD3	24971	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	95878204	95878686	95878424	Y	IPPK,PHF2,FAM120A,C9orf89,NINJ1	C9orf89,NINJ1	NA	NA	NA	NA	NINJ1	15884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	95882095	95882646	95882428	Y	IPPK,PHF2,C9orf89,NINJ1	C9orf89,NINJ1	NA	NA	NA	NA	NINJ1	11924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.17404732399855
chr9	95973709	95973758	95973734	Y	NA	NA	NA	NA	NA	NA	NINJ1	79139	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chr9	96044305	96044695	96044445	Y	NA	NA	NA	NA	NA	NA	NINJ1	149735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	96057122	96057472	96057169	Y	ZNF484,ZNF484,WNK2	NA	NA	NA	NA	NA	FAM120A	154532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	96057493	96057765	96057581	Y	ZNF484,ZNF484,C9orf129,WNK2	NA	NA	NA	NA	NA	FAM120A	154239	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.177990131493122
chr9	96434811	96435085	96434948	Y	PHF2	NA	NA	NA	NA	NA	PHF2	98122	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	96701891	96702241	96702065	Y	NA	NA	NA	NA	NA	NA	PTPDC1	88835	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	96919415	96919512	96919464	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	19604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	96928143	96928630	96928259	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	10486	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.51548083914505
chr9	96928795	96929410	96929111	Y	NA	MIRLET7D	NA	NA	NA	NA	MIRLET7D	9706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.985613349905016
chr9	97590305	97590486	97590422	Y	NA	NA	NA	NA	NA	NA	C9orf3	103322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.114553575312484
chr9	97622499	97622697	97622598	Y	NA	NA	NA	NA	NA	NA	C9orf3	135516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	97624826	97625112	97624969	Y	NA	NA	NA	NA	NA	NA	C9orf3	137843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	97684288	97685133	97684708	Y	NA	NA	FANCC	IMR90	Hi-C	24141950	C9orf3	197305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.192126385209828
chr9	97758166	97758608	97758351	Y	NA	NA	NA	NA	NA	NA	C9orf3	271183	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chr9	97770536	97771110	97770577	Y	NA	NA	NA	NA	NA	NA	C9orf3	283553	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chr9	97839686	97839862	97839737	Y	PTCH1	NA	NA	NA	NA	NA	FANCC	238129	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	97893656	97893882	97893768	Y	NA	NA	NA	NA	NA	NA	FANCC	184109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	98054647	98055067	98054952	Y	NA	FANCC	NA	NA	NA	NA	FANCC	22924	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	98075518	98075673	98075591	Y	NA	FANCC	NA	NA	NA	NA	FANCC	2318	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	98173547	98173783	98173614	Y	NA	RP11-435O5.2	NA	NA	NA	NA	RP11-435O5.2	13295	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr9	98273012	98273438	98273114	Y	C9orf102,FANCC,PTCH1,PTCH1,PTCH1,PTCH1,PTCH1	PTCH1	NA	NA	NA	NA	PTCH1	3901	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.148243257150089
chr9	98273818	98274186	98273872	Y	NA	PTCH1	NA	NA	NA	NA	PTCH1	3153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	98486890	98487110	98487000	Y	PTCH1,PTCH1	NA	C9orf102,SLC35D2,LINC00476,HSD17B3,LINC00092,LOC158435,LOC158434	IMR90	Hi-C	24141950	LINC00476	149149	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	98527125	98527421	98527164	Y	NA	NA	LOC158435,LINC00476,C9orf102	IMR90	Hi-C	24141950	LINC00476	108838	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.48943554250259
chr9	98533985	98534279	98534014	Y	NA	NA	LOC158435,C9orf102,FANCC,LINC00476,LINC00092	IMR90	Hi-C	24141950	LINC00476	101980	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.304051422192598
chr9	98583076	98583344	98583210	Y	NA	NA	NA	NA	NA	NA	LINC00476	52915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr9	98642406	98642593	98642483	Y	PTCH1,PTCH1,C9orf102	LINC00476	NA	NA	NA	NA	LINC00476	6147	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	98744078	98744248	98744144	Y	NA	NA	NA	NA	NA	NA	LINC00476	107819	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	98768233	98768612	98768423	Y	NA	NA	NA	NA	NA	NA	LINC00476	131974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	98899705	98899808	98899766	Y	CDC14B	EIF4BP3	FBP1,C9orf102,PTCH1,LOC158435,LOC158434,LINC00092,FANCC	IMR90	Hi-C	24141950	EIF4BP3	6481	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	98979716	98980057	98980045	Y	NA	RP11-240L7.4	NA	NA	NA	NA	RP11-240L7.4	26687	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	99106686	99107122	99106995	Y	NA	SLC35D2	NA	NA	NA	NA	SLC35D2	36870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr9	99132173	99132333	99132255	Y	NA	SLC35D2,RP11-172F4.2,ZNF367	NA	NA	NA	NA	SLC35D2	11659	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	99171138	99171308	99171256	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	RP11-172F4.2	3572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	99181547	99181719	99181643	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	2936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.919217238574354
chr9	99182775	99182932	99182834	Y	NA	SLC35D2,RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	ZNF367	4164	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	99213129	99213681	99213680	Y	ZNF510,CDC14B,HABP4	RP11-172F4.2,ZNF367,HABP4	NA	NA	NA	NA	HABP4	2646	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chr9	99317265	99317554	99317408	Y	HABP4,CDC14B	NA	HABP4	IMR90	Hi-C	24141950	CDC14B	62558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	99322452	99322838	99322645	Y	ZNF782	NA	HABP4	IMR90	Hi-C	24141950	CDC14B	57274	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	99334926	99335181	99335054	Y	NA	CDC14B	HABP4	IMR90	Hi-C	24141950	CDC14B	44931	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	100144851	100144941	100144896	Y	NA	TDRD7	NA	NA	NA	NA	TDRD7	27291	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.198537633289352
chr9	100151128	100151479	100151320	Y	TDRD7	TDRD7	NA	NA	NA	NA	TDRD7	20753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	100455337	100455352	100455343	Y	NA	XPA	NA	NA	NA	NA	XPA	2287	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	100565577	100566264	100565821	Y	CORO2A,FOXE1	NA	FOXE1,C9orf156	IMR90	Hi-C	24141950	XPA	107938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr9	100667728	100667773	100667740	Y	NA	C9orf156	NA	NA	NA	NA	C9orf156	15079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	100685565	100685605	100685585	Y	NA	C9orf156	NA	NA	NA	NA	C9orf156	2713	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	100743401	100743685	100743451	Y	NA	NA	NA	NA	NA	NA	ANP32B	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	100772550	100772875	100772560	Y	NA	ANP32B,NANS	NANS,TRIM14	IMR90	Hi-C	24141950	ANP32B	28907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.187360934722672
chr9	100880203	100880431	100880317	Y	C9orf156,HEMGN,TRIM14,TRIM14	TRIM14	NA	NA	NA	NA	TRIM14	709	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0749442715676287
chr9	100908591	100908763	100908677	Y	NA	TRIM14,CORO2A	TRIM14	IMR90	Hi-C	24141950	TRIM14	29097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	100931425	100931550	100931485	Y	C9orf156	CORO2A	NA	NA	NA	NA	CORO2A	21372	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr9	100985595	100985973	100985751	Y	TBC1D2	CORO2A,TBC1D2	NA	NA	NA	NA	TBC1D2	29942	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	100993569	100993588	100993579	Y	NA	CORO2A,TBC1D2	NA	NA	NA	NA	TBC1D2	22327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	101002580	101002910	101002849	Y	C9orf156,NANS,TBC1D2	CORO2A,TBC1D2	NA	NA	NA	NA	TBC1D2	13005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	101557390	101557800	101557457	Y	NA	ANKS6	NA	NA	NA	NA	ANKS6	143	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	101572840	101572995	101572898	Y	GALNT12	ANKS6	NA	NA	NA	NA	ANKS6	15593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	102580616	102580992	102580865	Y	NA	RP11-554F20.1,NR4A3	NA	NA	NA	NA	RP11-554F20.1	445	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.145614718820374
chr9	103173830	103174136	103174107	Y	NA	TMEFF1	C9orf30-TMEFF1,TEX10	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	TMEFF1	28424	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr9	103795840	103796119	103795981	Y	LPPR1	LPPR1	NA	NA	NA	NA	LPPR1	6849	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	104185147	104185490	104185310	Y	NA	BAAT,MRPL50,ZNF189,ALDOB	NA	NA	NA	NA	ALDOB	10615	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	107597613	107597745	107597668	Y	NA	NA	NA	NA	NA	NA	NIPSNAP3B	73175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	107613144	107613436	107613262	Y	NA	NA	NA	NA	NA	NA	RP11-217B7.2	74398	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	107628415	107628839	107628708	Y	ABCA1	NA	NA	NA	NA	NA	RP11-217B7.2	58995	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	107635337	107635884	107635542	Y	ABCA1	NA	NA	NA	NA	NA	RP11-217B7.2	51950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	107668768	107669725	107669153	Y	SLC44A1,OR13C3	RP11-217B7.2,ABCA1	NA	NA	NA	NA	RP11-217B7.2	18109	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr9	107730510	107730878	107730708	Y	SLC44A1,FSD1L,FSD1L,ABCA1	RP11-217B7.2,ABCA1,RP11-217B7.3	ABCA1	IMR90	Hi-C	24141950	RP11-217B7.3	21184	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	107825868	107826462	107826154	Y	FSD1L,FSD1L,ABCA1	NA	ABCA1,SLC44A1	IMR90	Hi-C	24141950	RP11-217B7.3	73806	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	107954000	107954398	107954183	Y	FSD1L,FSD1L,ABCA1	NA	ABCA1,SLC44A1	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	SLC44A1	50505	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	108052780	108053053	108052862	Y	ABCA1,TMEM38B,FSD1L,FSD1L	SLC44A1	NA	NA	NA	NA	SLC44A1	47877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	108058871	108059613	108059363	Y	ABCA1,TMEM38B,FSD1L,FSD1L	NA	NA	NA	NA	NA	SLC44A1	53968	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	108284643	108284789	108284719	Y	NA	FKTN	NA	NA	NA	NA	FKTN	33622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.155145619794687
chr9	109975791	109976065	109975989	Y	KLF4	NA	NA	NA	NA	NA	RAD23B	67353	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	110227888	110228126	110228018	Y	KLF4	KLF4	NA	NA	NA	NA	KLF4	22637	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	110512153	110512586	110512216	Y	KLF4	NA	KLF4	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	RP11-438P9.1	217482	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	110514044	110514454	110514287	Y	KLF4	NA	KLF4	MCF7	ChIA-PET	22265404	RP11-438P9.1	219373	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	111034300	111034792	111034481	Y	NA	NA	KLF4	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	RP11-220D10.1	352321	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	111578254	111578597	111578428	Y	NA	NA	NA	NA	NA	NA	IKBKAP	115799	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.543672726136426
chr9	111774521	111775173	111774726	Y	NA	CTNNAL1	NA	NA	NA	NA	CTNNAL1	712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	112076384	112076614	112076499	Y	NA	EPB41L4B	NA	NA	NA	NA	EPB41L4B	4630	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	112230117	112230469	112230293	Y	NA	PTPN3	NA	NA	NA	NA	PTPN3	28121	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	112238648	112239006	112238827	Y	PTPN3	PTPN3	NA	NA	NA	NA	PTPN3	19584	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	112262069	112262452	112262225	Y	PTPN3	PTPN3	NA	NA	NA	NA	PTPN3	3479	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr9	112569081	112569243	112569086	Y	PALM2	PALM2-AKAP2	NA	NA	NA	NA	PALM2-AKAP2	28492	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	112578765	112579213	112578950	Y	PALM2	PALM2-AKAP2	NA	NA	NA	NA	PALM2-AKAP2	38176	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	112791583	112792117	112791820	Y	NA	RP11-151F5.2	NA	NA	NA	NA	RP11-151F5.2	5945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	113014576	113014999	113014920	Y	AKAP2,TXN	C9orf152,TXN	NA	NA	NA	NA	TXN	1921	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	113646742	113646840	113646791	Y	NA	NA	NA	NA	NA	NA	KIAA0368	598185	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	114111620	114111657	114111640	Y	OR2K2	NA	NA	NA	NA	NA	KIAA0368	133368	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	114721832	114722310	114722097	Y	UGCG	NA	C9orf84,UGCG,MIR3134,SUSD1,HSDL2	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	UGCG	64786	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	114805021	114805139	114805071	Y	NA	NA	NA	NA	NA	NA	SUSD1	130549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	114938880	114939057	114938953	Y	SUSD1	SUSD1	NA	NA	NA	NA	SUSD1	3192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.100417321595778
chr9	115031676	115032066	115031959	Y	KIAA1958	NA	NA	NA	NA	NA	PTBP3	61881	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	115067475	115067560	115067518	Y	SNX30,ROD1,KIAA1958,HSDL2	PTBP3	NA	NA	NA	NA	PTBP3	26387	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	115071018	115071139	115071076	Y	NA	PTBP3	NA	NA	NA	NA	PTBP3	22808	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	115110736	115110930	115110781	Y	NA	PTBP3,HSDL2	NA	NA	NA	NA	PTBP3	16789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	115258728	115258879	115258816	Y	SNX30,SUSD1,ROD1	KIAA1958,C9orf147	NA	NA	NA	NA	C9orf147	11244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	115294232	115294441	115294354	Y	NA	KIAA1958,C9orf147	NA	NA	NA	NA	C9orf147	46748	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	115470219	115470249	115470232	Y	ROD1,HSDL2,C9orf80	RP11-276E15.4,SNX30	NA	NA	NA	NA	RP11-276E15.4	40487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	115509312	115509740	115509544	Y	KIAA1958,ZNF883,ZFP37,SNX30	RP11-276E15.4,SNX30	C9orf80,SNX30,KIAA1958	IMR90	Hi-C	24141950	RP11-276E15.4	996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	115523438	115523763	115523601	Y	ZFP37	RP11-276E15.4,SNX30	NA	NA	NA	NA	SNX30	12320	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	115527127	115527401	115527315	Y	NA	RP11-276E15.4,SNX30	NA	NA	NA	NA	SNX30	16009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.215793539900847
chr9	115605913	115605928	115605920	Y	ZFP37	NA	NA	NA	NA	NA	SNX30	94795	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	115606684	115606763	115606738	Y	ZFP37	NA	NA	NA	NA	NA	SNX30	95566	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	115757286	115757809	115757590	Y	NA	ZNF883	NA	NA	NA	NA	ZNF883	14698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	115901783	115902068	115901877	Y	ZNF883,ALAD	SLC31A2	NA	NA	NA	NA	SLC31A2	9154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	116011576	116011925	116011593	Y	NA	FKBP15,SLC31A1,PRPF4,CDC26	NA	NA	NA	NA	PRPF4	23698	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	116031847	116032083	116031965	Y	NA	PRPF4,CDC26	NA	NA	NA	NA	PRPF4	3540	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	116036635	116036980	116036798	Y	SLC31A2,FKBP15,RGS3	PRPF4,CDC26	NA	NA	NA	NA	CDC26	766	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.105182772082934
chr9	116280836	116280940	116280902	Y	NA	NA	NA	NA	NA	NA	RGS3	75825	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	116281787	116282895	116282664	Y	NA	NA	NA	NA	NA	NA	RGS3	76776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr9	116304651	116305008	116304842	Y	NA	NA	NA	NA	NA	NA	RGS3	99640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	116385277	116385518	116385372	Y	RGS3	RP11-18B16.2	NA	NA	NA	NA	RP11-18B16.2	25718	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	116398496	116398888	116398553	Y	C9orf43,RGS3	RP11-18B16.2	C9orf43,RGS3,BSPRY,ALAD	IMR90	Hi-C	24141950	RP11-18B16.2	12348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	116728685	116728905	116728795	Y	AMBP	NA	NA	NA	NA	NA	ZNF618	92123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	116918999	116919461	116919193	Y	NA	COL27A1	NA	NA	NA	NA	COL27A1	3159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.165830692189094
chr9	116937744	116937911	116937764	Y	ORM1,COL27A1	COL27A1	NA	NA	NA	NA	COL27A1	21904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.193440654374685
chr9	116987864	116988161	116988001	Y	NA	NA	NA	NA	NA	NA	COL27A1	72024	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	117077279	117077734	117077603	Y	AMBP,ORM2,ORM1	NA	NA	NA	NA	NA	AKNA	76951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	117131457	117132230	117131898	Y	DFNB31,DFNB31,AKNA	AKNA	NA	NA	NA	NA	AKNA	22455	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	117351016	117351370	117351316	Y	TNFSF8,AKNA,DFNB31,DFNB31,ATP6V1G1	ATP6V1G1,C9orf91	NA	NA	NA	NA	ATP6V1G1	2990	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	117647197	117647589	117647272	Y	ATP6V1G1,TNFSF15,TNFSF8	NA	NA	NA	NA	NA	TNFSF15	80791	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.987259147497383
chr9	117671276	117671580	117671329	Y	DFNB31,ATP6V1G1,TNFSF15,TNFSF15,TNFSF8	NA	NA	NA	NA	NA	TNFSF15	104870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	118353952	118354125	118354022	Y	TNC	NA	ASTN2,PAPPA,LOC100128505,LINC00474	IMR90	Hi-C	24141950	TNFSF15	787546	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	118496415	118496674	118496563	Y	NA	NA	NA	NA	NA	NA	TNFSF15	930009	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	118706424	118707025	118706637	Y	NA	NA	ASTN2,LINC00474,PAPPA	IMR90	Hi-C	24141950	TRIM32	740556	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.651323427197112
chr9	118993225	118993558	118993231	Y	NA	NA	NA	NA	NA	NA	TRIM32	454023	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	119311432	119311888	119311785	Y	NA	NA	NA	NA	NA	NA	TRIM32	135693	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	119329308	119329509	119329406	Y	NA	NA	NA	NA	NA	NA	TRIM32	118072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.20165728618414
chr9	119404408	119404429	119404420	Y	NA	TRIM32	NA	NA	NA	NA	TRIM32	43152	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chr9	119466124	119466469	119466162	Y	NA	TRIM32	NA	NA	NA	NA	TRIM32	18543	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	119722130	119722198	119722164	Y	NA	NA	NA	NA	NA	NA	TRIM32	274549	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	120175638	120175763	120175745	Y	ASTN2	NA	NA	NA	NA	NA	TLR4	288847	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	122914670	122914945	122914761	Y	NA	NA	NA	NA	NA	NA	CDK5RAP2	425503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	123251976	123252022	123252001	Y	CDK5RAP2	NA	NA	NA	NA	NA	CDK5RAP2	88426	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chr9	123304240	123304451	123304346	Y	NA	CDK5RAP2	NA	NA	NA	NA	CDK5RAP2	35997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	123455501	123455738	123455670	Y	NA	MEGF9	NA	NA	NA	NA	MEGF9	19010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	123495591	123495780	123495701	Y	NA	MEGF9	MEGF9,FBXW2	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	MEGF9	20843	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr9	123635278	123635355	123635317	Y	NA	PSMD5,PHF19	NA	NA	NA	NA	PHF19	2251	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	123640419	123640826	123640772	Y	NA	PSMD5,PHF19	NA	NA	NA	NA	PHF19	2813	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chr9	123878647	123878673	123878659	Y	NA	CNTRL	NA	NA	NA	NA	CNTRL	43506	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	124125049	124125440	124125316	Y	NA	STOM	NA	NA	NA	NA	STOM	5091	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	124131208	124131276	124131236	Y	NA	STOM	GSN	MCF7	ChIA-PET	22265404	STOM	677	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	124134922	124135274	124134953	Y	NA	STOM	GSN	MCF7	ChIA-PET	22265404	STOM	4391	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chr9	124361597	124361984	124361689	Y	NA	DAB2IP	NA	NA	NA	NA	DAB2IP	34261	CAGE	HepG2 ENCODE	hg19	FANTOM5	2.15102272664028
chr9	124366644	124366826	124366729	Y	NA	DAB2IP	NA	NA	NA	NA	DAB2IP	39308	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	124383753	124383935	124383823	Y	DAB2IP	NA	NA	NA	NA	NA	DAB2IP	56417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	124498744	124498978	124498839	Y	GSN	NA	NA	NA	NA	NA	DAB2IP	171408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	124499221	124499709	124499392	Y	NA	NA	NA	NA	NA	NA	DAB2IP	171885	CAGE	HepG2 ENCODE	hg19	FANTOM5	16.0089108122595
chr9	125109314	125109437	125109338	Y	NA	NA	TTLL11,MIR4478,MORN5,NDUFA8,LHX6,RBM18,MRRF,PTGS1,OR1K1,PDCL	IMR90	Hi-C	24141950	RBM18	84196	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	125529101	125529466	125529284	Y	MRRF,OR1J1,OR1J2,OR1J4,OR1N1,OR1N2,OR1L8,OR1Q1,OR1B1,OR1L1,GPR21,OR1L4,OR1L6	NA	NA	NA	NA	NA	PDCL	59444	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	125811144	125811514	125811213	Y	NA	NA	MIR600HG	IMR90	Hi-C	24141950	RABGAP1	110032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	126028834	126029635	126029406	Y	NA	NA	NA	NA	NA	NA	STRBP	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	126138103	126138404	126138241	Y	NA	CRB2	NA	NA	NA	NA	CRB2	21654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	126200869	126200875	126200873	Y	RABGAP1,GPR21,DENND1A	NA	NA	NA	NA	NA	CRB2	84420	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	126232587	126232866	126232722	Y	NA	NA	NA	NA	NA	NA	CRB2	116138	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.525102038752874
chr9	126237774	126237937	126237796	Y	NA	NA	NA	NA	NA	NA	CRB2	121325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	126291594	126291648	126291621	Y	NA	NA	NA	NA	NA	NA	CRB2	175145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	126297071	126297260	126297221	Y	NA	NA	NA	NA	NA	NA	CRB2	180622	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	126446407	126446440	126446424	Y	NA	NA	NA	NA	NA	NA	DENND1A	243991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	126468286	126468378	126468332	Y	STRBP,STRBP	NA	NA	NA	NA	NA	DENND1A	222053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	126632279	126632299	126632291	Y	NA	NA	NA	NA	NA	NA	DENND1A	58132	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	126644407	126644614	126644564	Y	LHX2	DENND1A	NA	NA	NA	NA	DENND1A	45817	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	126690123	126690365	126690192	Y	DENND1A	DENND1A	NA	NA	NA	NA	DENND1A	66	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	126695812	126695993	126695905	Y	PSMB7	DENND1A	NA	NA	NA	NA	DENND1A	5381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	126983428	126983685	126983554	Y	DENND1A	NEK6,RP11-121A14.3	DENND1A,NEK6,PSMB7,LHX2,LOC100129034	IMR90	Hi-C	24141950	NEK6	34200	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr9	127040505	127040685	127040582	Y	NEK6,NEK6	NEK6,RP11-121A14.3	NA	NA	NA	NA	RP11-121A14.3	17350	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	127044216	127044998	127044297	Y	DENND1A	NEK6,RP11-121A14.3	NA	NA	NA	NA	RP11-121A14.3	21061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	127059883	127060148	127059983	Y	NA	NEK6,RP11-121A14.3	NA	NA	NA	NA	RP11-121A14.3	36728	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	127266277	127266534	127266531	Y	NA	NR5A1	NA	NA	NA	NA	NR5A1	1175	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr9	127267013	127267383	127267321	Y	NR5A1	NR5A1	NA	NA	NA	NA	NR5A1	326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chr9	127267802	127268125	127267965	Y	NR5A1	NR5A1	NA	NA	NA	NA	NR5A1	93	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	127356875	127357120	127357108	Y	NA	NA	NA	NA	NA	NA	MIR181A2HG	61626	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	127457265	127457441	127457351	Y	NA	MIR181A2HG	NA	NA	NA	NA	MIR181A2HG	38519	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0861209701343093
chr9	127468042	127468336	127468195	Y	NA	MIR181A2HG	NA	NA	NA	NA	MIR181A2HG	49296	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	127519728	127520109	127519909	Y	NA	NR6A1,OLFML2A	NA	NA	NA	NA	NR6A1	11480	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr9	127943373	127943395	127943384	Y	NA	SCAI,PPP6C,RABEPK	NA	NA	NA	NA	PPP6C	6823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	127944437	127944756	127944696	Y	NR6A1,GOLGA1,PPP6C,GAPVD1	SCAI,PPP6C,RABEPK	NA	NA	NA	NA	PPP6C	5462	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	127947242	127947259	127947251	Y	NA	SCAI,PPP6C,RABEPK	NA	NA	NA	NA	PPP6C	2959	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.129181455201464
chr9	127976903	127977044	127976974	Y	NA	PPP6C,RABEPK,HSPA5,RP11-65N13.8,GAPVD1	NA	NA	NA	NA	RABEPK	16082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	127980597	127980978	127980790	Y	NA	PPP6C,RABEPK,HSPA5,RP11-65N13.8,GAPVD1	NA	NA	NA	NA	RABEPK	19776	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	128170862	128170906	128170878	Y	NA	NA	PBX3	MCF7	ChIA-PET	22265404	GAPVD1	148789	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	128172483	128172773	128172647	Y	NA	NA	PBX3	MCF7	ChIA-PET	22265404	GAPVD1	150410	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	128211957	128212104	128212028	Y	NA	NA	NA	NA	NA	NA	GAPVD1	189884	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	128274126	128274455	128274251	Y	NA	NA	NA	NA	NA	NA	MAPKAP1	193058	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	128299092	128299304	128299184	Y	NA	NA	NA	NA	NA	NA	MAPKAP1	168209	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	128530354	128530667	128530385	Y	NA	PBX3	NA	NA	NA	NA	PBX3	22730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	128651913	128652195	128652163	Y	FAM125B	NA	NA	NA	NA	NA	PBX3	144289	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	128908654	128909040	128908854	Y	NA	NA	PBX3	IMR90	Hi-C	24141950	PBX3	401030	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.247677326401321
chr9	129090797	129090964	129090895	Y	ZBTB43	NA	NA	NA	NA	NA	LMX1B	283758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	129175569	129176003	129175771	Y	ZBTB34	NA	NA	NA	NA	NA	LMX1B	198719	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	129190864	129191177	129190996	Y	ZBTB34	NA	NA	NA	NA	NA	LMX1B	183545	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	129285503	129285639	129285571	Y	NA	NA	NA	NA	NA	NA	LMX1B	89083	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	129286019	129286223	129286082	Y	FAM125B,ZBTB43,ZBTB34	NA	NA	NA	NA	NA	LMX1B	88499	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chr9	129290502	129290605	129290554	Y	NA	NA	NA	NA	NA	NA	LMX1B	84117	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chr9	129484571	129485188	129484881	Y	NA	NA	NA	NA	NA	NA	ZBTB43	80097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	129624910	129625209	129625060	Y	RALGPS1	ZBTB34,RALGPS1	NA	NA	NA	NA	ZBTB34	3966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	130307843	130308200	130307973	Y	SLC2A8,FAM129B	FAM129B	NA	NA	NA	NA	FAM129B	31068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	130329548	130329691	130329605	Y	PTRH1,FPGS,FPGS,ENG,CDK9,FAM129B,FAM129B	FAM129B,STXBP1	NA	NA	NA	NA	FAM129B	9577	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chr9	130341922	130342377	130342071	Y	NA	FAM129B,STXBP1	NA	NA	NA	NA	FAM129B	2654	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	130373507	130373780	130373645	Y	GARNL3,SLC25A25,FAM102A,STXBP1	FAM129B,STXBP1	NA	NA	NA	NA	STXBP1	963	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	130590782	130591142	130590862	Y	FAM129B,TOR2A,CDK9,FPGS,FPGS	CDK9,FPGS,ENG,AK1	NA	NA	NA	NA	ENG	23893	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr9	130600573	130601245	130600861	Y	FAM129B,TOR2A,CDK9,FPGS,FPGS	FPGS,ENG,AK1	NA	NA	NA	NA	ENG	13790	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	130681632	130682091	130681875	Y	FAM129B,TOR2A,CDK9	AK1,ST6GALNAC6,ST6GALNAC4,PIP5KL1,DPM2	NA	NA	NA	NA	ST6GALNAC4	4315	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	130717134	130717317	130717253	Y	NA	ST6GALNAC4,PIP5KL1,DPM2,FAM102A	NA	NA	NA	NA	DPM2	18371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	130736209	130736450	130736330	Y	NA	PIP5KL1,DPM2,FAM102A	NA	NA	NA	NA	FAM102A	4342	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	130743802	130743907	130743855	Y	FAM102A	DPM2,FAM102A	NA	NA	NA	NA	FAM102A	3010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	130770213	130770372	130770289	Y	SLC25A25,NAIF1,DPM2,FAM102A	FAM102A	FAM102A,SLC25A25,NAIF1	MCF7,IMR90	ChIA-PET,Hi-C	22265404,24141950	FAM102A	29421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	130817970	130818290	130818247	Y	C9orf117,TTC16,SH2D3C,SH2D3C,DPM2,FAM102A	SLC25A25,NAIF1	NA	NA	NA	NA	SLC25A25	10190	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	130834459	130834744	130834726	Y	NA	SLC25A25,NAIF1	NA	NA	NA	NA	NAIF1	5974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	131007254	131007504	131007363	Y	URM1,CERCAM,FPGS,FPGS,ST6GALNAC6,ST6GALNAC4,PIP5KL1,CIZ1	DNM1,CIZ1,SWI5,GOLGA2	NA	NA	NA	NA	SWI5	28154	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.142163537498076
chr9	131127114	131127521	131127297	Y	SLC25A25	COQ4,TRUB2,SLC27A4,URM1,CERCAM	NA	NA	NA	NA	URM1	4077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	131316865	131317367	131316977	Y	NA	RP11-216B9.6,SPTAN1	NA	NA	NA	NA	SPTAN1	3999	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chr9	131637939	131638335	131638137	Y	NA	C9orf114,LRRC8A,CCBL1,PHYHD1	C9orf114,ENDOG	IMR90	Hi-C	24141950	LRRC8A	4056	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr9	131645612	131645749	131645679	Y	NA	LRRC8A,CCBL1,PHYHD1	NA	NA	NA	NA	CCBL1	2839	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.119319025799641
chr9	131673839	131674187	131673982	Y	PPP2R4,PPP2R4,PPP2R4,LRRC8A,LRRC8A	LRRC8A,CCBL1,PHYHD1,DOLK,NUP188	NA	NA	NA	NA	PHYHD1	6987	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	131929415	131929566	131929473	Y	METTL11A,C9orf106	IER5L	NA	NA	NA	NA	IER5L	8974	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr9	131936354	131936600	131936398	Y	METTL11A,PPP2R4,PPP2R4,PPP2R4	IER5L	NA	NA	NA	NA	IER5L	1940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.143477806662933
chr9	131937094	131937487	131937262	Y	PRRX2,METTL11A,ASB6,ZDHHC12,TBC1D13,ENDOG,PHYHD1,DOLK,CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L	IER5L	NA	NA	NA	NA	IER5L	1053	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.149065900142673
chr9	132107111	132107275	132107178	Y	C9orf78,C9orf106	RP11-65J3.1	IER5L,C9orf106,LOC100506190,C9orf50,ASB6,METTL11A,PPP2R4	H1ESC,HELA,IMR90,MCF7	5C,Hi-C,ChIA-PET	22955621,24141950,22265404	RP11-65J3.1	14532	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	132107499	132107735	132107644	Y	TOR1B,C9orf106	RP11-65J3.1	IER5L,C9orf106,LOC100506190,C9orf50,ASB6,METTL11A,PPP2R4	H1ESC,HELA,IMR90,MCF7	5C,Hi-C,ChIA-PET	22955621,24141950,22265404	RP11-65J3.1	14920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	132145857	132146151	132146146	Y	FAM73B,C9orf106,USP20,USP20,TOR1B,C9orf78,ASB6	NA	C9orf106,LOC100506190,IER5L,C9orf50,PPP2R4,CRAT	IMR90,MCF7,K562,HELA	Hi-C,ChIA-PET,5C	24141950,22265404,22955621	RP11-65J3.1	53278	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	132168772	132168919	132168823	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	74811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	132175926	132176326	132176076	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	67404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.510965785036168
chr9	132176730	132177172	132176936	Y	NA	NA	C9orf106,LOC100506190,C9orf50,PPP2R4,IER5L	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	LINC00963	66558	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	132220495	132220692	132220545	Y	FAM73B,USP20,USP20,C9orf78,ASB6	LINC00963	PPP2R4,CRAT,ASB6,METTL11A,IER5L,C9orf106,C9orf50,LOC100506190	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	23038	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	132221518	132221749	132221614	Y	USP20,USP20,C9orf78	LINC00963	PPP2R4,CRAT,LOC100506190,IER5L,C9orf106	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	21981	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	132223086	132223659	132223410	Y	C9orf106,TOR1B	LINC00963	PPP2R4,CRAT,LOC100506190,IER5L,C9orf106,C9orf50,METTL11A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	20071	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	132247452	132247693	132247545	Y	C9orf106	LINC00963	NA	NA	NA	NA	LINC00963	3722	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	132249735	132250094	132249903	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	6005	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	132257886	132258547	132258348	Y	NA	LINC00963	NA	NA	NA	NA	LINC00963	14156	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.746312753057912
chr9	132319720	132320056	132319894	Y	DOLPP1	NA	FAM73B,DOLPP1,IER5L,LOC100506190,METTL11A,PPP2R4,C9orf106,C9orf50	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	75990	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.94443989222422
chr9	132321078	132321454	132321255	Y	NA	NA	FAM73B,DOLPP1,IER5L,LOC100506190,METTL11A,PPP2R4,C9orf106,C9orf50	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	LINC00963	77348	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.765545985689286
chr9	132330057	132330508	132330201	Y	NA	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	71936	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.521319329003064
chr9	132330921	132331424	132331168	Y	IER5L,C9orf50	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	71020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.653460339354553
chr9	132331590	132331738	132331651	Y	CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L	NA	FAM73B,DOLPP1,LOC100506190,C9orf50,PPP2R4,CRAT,IER5L,C9orf106,METTL11A	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	ASB6	70706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.433392975138824
chr9	132359283	132359664	132359324	Y	CRAT,PPP2R4,PPP2R4,PPP2R4,IER5L,PTGES,METTL11A,ASB6	ASB6	NA	NA	NA	NA	ASB6	42780	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.24208923292158
chr9	132359774	132359922	132359814	Y	PPP2R4,PPP2R4,PPP2R4,METTL11A	ASB6	NA	NA	NA	NA	ASB6	42522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.704406439410853
chr9	132369856	132370376	132370136	Y	CRAT,IER5L,C9orf106,PRRX2,GPR107	ASB6	NA	NA	NA	NA	ASB6	32068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.606126029972516
chr9	132372165	132372686	132372524	Y	NA	ASB6	NA	NA	NA	NA	ASB6	29758	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.465608290066809
chr9	132373475	132373922	132373518	Y	NA	ASB6	NA	NA	NA	NA	ASB6	28522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	132379342	132379626	132379484	Y	NA	ASB6	NA	NA	NA	NA	ASB6	22818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	132646480	132646964	132646831	Y	ASB6,C9orf78,USP20,USP20,FNBP1	NA	NA	NA	NA	NA	C9orf78	50338	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.188675203887529
chr9	132648080	132648314	132648193	Y	ASB6,TOR1B,C9orf78,USP20,USP20,FNBP1	NA	NA	NA	NA	NA	C9orf78	51938	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.337741104030202
chr9	132814142	132814504	132814316	Y	TOR1B	FNBP1,GPR107	NCS1	IMR90	Hi-C	24141950	GPR107	437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	132847110	132847326	132847217	Y	USP20,USP20	FNBP1,GPR107	NA	NA	NA	NA	GPR107	33405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	132949592	132949704	132949653	Y	C9orf78	NCS1	NA	NA	NA	NA	NCS1	16735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	133001906	133002144	133002026	Y	NA	NA	NA	NA	NA	NA	NCS1	69049	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	133321021	133321306	133321114	Y	ASS1	ASS1	NA	NA	NA	NA	ASS1	2705	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	133565449	133565699	133565571	Y	NA	RP11-57C19.2,EXOSC2,ABL1	NA	NA	NA	NA	EXOSC2	1409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.470373740553965
chr9	133619181	133619471	133619230	Y	NA	ABL1	NA	NA	NA	NA	ABL1	31848	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	133711348	133711666	133711497	Y	NA	NA	NA	NA	NA	NA	ABL1	124015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	133736245	133736518	133736410	Y	ABL1	NA	NA	NA	NA	NA	LAMC3	145951	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	134131602	134132161	134131829	Y	RAPGEF1,PRRC2B,QRFP,NUP214,FAM78A	PPAPDC3	NA	NA	NA	NA	PPAPDC3	30920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	134144427	134144727	134144559	Y	NUP214,FAM78A	PPAPDC3	NA	NA	NA	NA	PPAPDC3	18354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	134248752	134249121	134248943	Y	AIF1L,POMT1,PRRC2B	PRRC2B	PRRC2B,NUP214,FAM78A	IMR90	Hi-C	24141950	PRRC2B	18359	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.855449153966205
chr9	134278219	134278688	134278276	Y	NA	PRRC2B	PRRC2B,NUP214,FAM78A,PPAPDC3	IMR90	Hi-C	24141950	PRRC2B	10739	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	134552911	134553181	134553024	Y	FAM78A,RAPGEF1,RAPGEF1	NA	NA	NA	NA	NA	RAPGEF1	60280	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	134608936	134609538	134609242	Y	RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	3923	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	134610888	134611363	134611119	Y	RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	2098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.176675862328264
chr9	134613837	134614689	134614350	Y	RAPGEF1,RAPGEF1	RAPGEF1	NA	NA	NA	NA	RAPGEF1	376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	134652581	134652848	134652715	Y	NA	RAPGEF1	MED27,NTNG2,SETX	IMR90	Hi-C	24141950	RAPGEF1	39120	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	134773213	134773507	134773412	Y	NA	NA	NA	NA	NA	NA	RAPGEF1	159752	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	134950793	134951083	134950938	Y	NA	MED27	NA	NA	NA	NA	MED27	2212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	135197315	135197652	135197484	Y	NA	SETX	NA	NA	NA	NA	SETX	30720	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	135279793	135280144	135280078	Y	TTF1	TTF1,RNU5D-2P	NA	NA	NA	NA	TTF1	65	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	135818615	135818626	135818622	Y	RALGDS,C9orf96	TSC1	NA	NA	NA	NA	TSC1	595	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chr9	135989434	135989663	135989519	Y	SLC2A6,RPL7A,RALGDS,RALGDS	RALGDS	NA	NA	NA	NA	RALGDS	47638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	136075454	136075720	136075558	Y	NA	RALGDS	NA	NA	NA	NA	RALGDS	38153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	136226163	136226469	136226316	Y	NA	SURF6,MED22,RPL7A,SNORD36A,SNORD36C,SURF2,SURF1,SURF4,C9orf96	NA	NA	NA	NA	SURF1	4611	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	136235762	136236074	136236007	Y	NA	SURF6,MED22,RPL7A,SNORD36A,SNORD36C,SURF2,SURF1,SURF4,C9orf96,ADAMTS13,REXO4	NA	NA	NA	NA	SURF4	4896	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	136579870	136580130	136580087	Y	NA	SARDH	NA	NA	NA	NA	SARDH	22947	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.168459230518809
chr9	136580491	136580641	136580566	Y	NA	SARDH	NA	NA	NA	NA	SARDH	22436	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chr9	136720858	136721171	136721081	Y	SLC2A6,RXRA	NA	NA	NA	NA	NA	SARDH	117781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	136746393	136746610	136746453	Y	VAV2	NA	NA	NA	NA	NA	VAV2	109116	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	136753303	136753756	136753577	Y	C9orf7,VAV2	NA	SARDH	IMR90	Hi-C	24141950	VAV2	101970	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.872374043757388
chr9	136779643	136779949	136779796	Y	NA	NA	NA	NA	NA	NA	VAV2	75777	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chr9	136856624	136856782	136856656	Y	VAV2	VAV2,LINC00094	NA	NA	NA	NA	VAV2	898	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chr9	136996268	136996567	136996488	Y	NA	WDR5	WDR5	K562	ChIA-PET	22265404	WDR5	1920	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	136999790	136999893	136999856	Y	NA	WDR5	NA	NA	NA	NA	WDR5	1303	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	137215635	137215833	137215709	Y	RXRA	RXRA	NA	NA	NA	NA	RXRA	8691	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.213656627743405
chr9	137220336	137220598	137220352	Y	NA	RXRA	NA	NA	NA	NA	RXRA	13392	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.175361593163407
chr9	137221069	137221192	137221119	Y	RXRA	RXRA	NA	NA	NA	NA	RXRA	14125	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.212342358578548
chr9	137230447	137230827	137230522	Y	NA	RXRA	NA	NA	NA	NA	RXRA	23503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	137305745	137306050	137305907	Y	RXRA	NA	NA	NA	NA	NA	RXRA	98801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	137384089	137384391	137384235	Y	COL5A1	NA	COL5A1,RNU6ATAC,WDR5	IMR90	Hi-C	24141950	RXRA	177145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	137739401	137739789	137739783	Y	NA	NA	NA	NA	NA	NA	RXRA	532457	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	138233554	138233668	138233594	Y	NA	NA	OLFM1	IMR90	Hi-C	24141950	PPP1R26	135257	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	138348639	138348707	138348673	Y	NA	PPP1R26,MRPS2,C9orf116	NA	NA	NA	NA	PPP1R26	20218	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chr9	138884665	138885093	138884961	Y	NA	UBAC1	NA	NA	NA	NA	UBAC1	33439	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.956518199479021
chr9	138886133	138886389	138886266	Y	NA	UBAC1	NA	NA	NA	NA	UBAC1	34907	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.1511130252738
chr9	138894941	138895015	138894978	Y	NA	UBAC1	NA	NA	NA	NA	UBAC1	43715	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	138915703	138915918	138915811	Y	NA	NA	NA	NA	NA	NA	UBAC1	64477	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chr9	138986008	138986159	138986118	Y	NACC2	NACC2,C9orf69	NA	NA	NA	NA	NACC2	877	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.409234194275532
chr9	139539341	139539721	139539606	Y	CARD9,SEC16A,NOTCH1,UAP1L1,EGFL7,EGFL7	EGFL7,AGPAT2	SEC16A,C9orf163	MCF7,K562	ChIA-PET	22265404	EGFL7	11587	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	139540454	139540544	139540487	Y	FAM69B,EGFL7,EGFL7	EGFL7,AGPAT2	SEC16A,C9orf163	MCF7,K562	ChIA-PET	22265404	EGFL7	10764	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	139540778	139541198	139541031	Y	NOTCH1,NPDC1,FAM69B,EGFL7,EGFL7	EGFL7,AGPAT2	SEC16A,C9orf163	MCF7,K562	ChIA-PET	22265404	EGFL7	10110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.218422078230562
chr9	139591698	139592004	139591952	Y	C8G	EGFL7,AGPAT2,FAM69B,SNHG7,LCN10	NA	NA	NA	NA	AGPAT2	11823	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chr9	139606234	139606418	139606254	Y	LCNL1,FUT7,CLIC3,C9orf142,ABCA2,KIAA1984	AGPAT2,FAM69B,SNHG7,LCN10	NA	NA	NA	NA	FAM69B	1212	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	139737773	139737949	139737875	Y	NA	PHPT1,EDF1,TRAF2	NA	NA	NA	NA	PHPT1	3227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chr9	139826661	139826850	139826762	Y	NOTCH1,NDOR1,LCNL1,TRAF2	FBXW5,C8G,LCN12,PTGDS	NA	NA	NA	NA	FBXW5	10298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.095651871108622
chr9	140022067	140022152	140022137	Y	EHMT1,WDR85,NDOR1,ANAPC2	MAN1B1,MIR3621,LRRC26	NA	NA	NA	NA	MIR3621	39570	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chr9	140023271	140023604	140023504	Y	EHMT1,ABCA2,PNPLA7,NRARP,ANAPC2	MAN1B1,MIR3621,LRRC26	NA	NA	NA	NA	MIR3621	38118	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.372253428860391
chr9	140023869	140024391	140024239	Y	NA	MAN1B1,MIR3621,LRRC26	GRIN1	K562	ChIA-PET	22265404	MIR3621	37331	CAGE	HepG2 ENCODE	hg19	FANTOM5	21.0181740069013
chr9	140101916	140102100	140102008	Y	C9orf172,FUT7	MIR3621,LRRC26,ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,RNF208,C9orf169,TUBB4B	NA	NA	NA	NA	NDOR1	3769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chr9	140117588	140118357	140118103	Y	C9orf37,C9orf86,FBXW5,ABCA2,NPDC1,GRIN1,SSNA1,ANAPC2,TPRN,TMEM203,RNF208,WDR85,NELF,MRPL41,COBRA1	ANAPC2,SSNA1,TPRN,TMEM203,NDOR1,RNF208,C9orf169,TUBB4B	NA	NA	NA	NA	C9orf169	501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.504886065384154
chr9	140134697	140134985	140134927	Y	C9orf86,C9orf172,TRAF2,PTGDS,LCNL1,ABCA2,ENTPD2,UAP1L1,DPP7,GRIN1,TPRN,RNF208,PNPLA7,NOXA1,NELF,EXD3	TPRN,TMEM203,NDOR1,RNF208,C9orf169,TUBB4B	NA	NA	NA	NA	TUBB4B	1032	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chr9	140169154	140169348	140169240	Y	NA	TUBB4B,NRARP	NA	NA	NA	NA	NRARP	25355	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	140189199	140189592	140189229	Y	NA	NRARP	NA	NA	NA	NA	NRARP	5111	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.398058007316051
chr9	140200723	140200951	140200850	Y	NRARP	NRARP	NA	NA	NA	NA	NRARP	6020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chr9	140274735	140275080	140274933	Y	CACNA1B,PTGDS,ABCA2,GRIN1,RNF208,PNPLA7	EXD3,NOXA1	NA	NA	NA	NA	EXD3	40634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	140301516	140301688	140301630	Y	CACNA1B,NRARP	EXD3,NOXA1,ENTPD8	NA	NA	NA	NA	EXD3	14026	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chr9	140301767	140302162	140302062	Y	NA	EXD3,NOXA1,ENTPD8	NA	NA	NA	NA	EXD3	13552	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.316542389924136
chr9	140306093	140306345	140306289	Y	NRARP	EXD3,NOXA1,ENTPD8	NA	NA	NA	NA	EXD3	9369	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chr9	140412995	140413413	140413155	Y	CACNA1B,ABCA2,ENTPD2,GRIN1,RNF208,PNPLA7	MRPL41	NA	NA	NA	NA	MRPL41	30238	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chr9	140565381	140565755	140565635	Y	NRARP	NA	NA	NA	NA	NA	EHMT1	53937	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.483355822850577
chr9	140689053	140689448	140689207	Y	NA	NA	NA	NA	NA	NA	EHMT1	177609	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	2816950	2817136	2817043	Y	ARSH,ARSE	ARSD	NA	NA	NA	NA	ARSD	28256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chrX	2845714	2845991	2845779	Y	NA	ARSD,ARSE	NA	NA	NA	NA	ARSD	322	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.252111760068166
chrX	3591324	3591658	3591618	Y	NA	PRKX	NA	NA	NA	NA	PRKX	37991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	3732842	3733263	3733002	Y	PRKX	NA	NA	NA	NA	NA	PRKX	103193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.343329197509943
chrX	3870962	3871082	3871022	Y	NA	NA	NA	NA	NA	NA	PRKX	241313	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	4628683	4629054	4628903	Y	NA	NA	NA	NA	NA	NA	RP11-555H23.1	594115	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	9433838	9434425	9434365	Y	TBL1X	TBL1X	NA	NA	NA	NA	TBL1X	4503	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chrX	9477403	9477544	9477474	Y	FAM9B,TBL1X,LOC100288814	TBL1X	NA	NA	NA	NA	TBL1X	48068	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	9509355	9509595	9509475	Y	NA	NA	NA	NA	NA	NA	TBL1X	80020	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	9700566	9700851	9700709	Y	LOC100288814	NA	NA	NA	NA	NA	SHROOM2	51645	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	9786668	9786951	9786810	Y	NA	SHROOM2,RP11-98L4.1	NA	NA	NA	NA	RP11-98L4.1	1159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	10161663	10162021	10162010	Y	NA	NA	NA	NA	NA	NA	WWC3	180061	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	10712546	10712862	10712704	Y	NA	NA	NA	NA	NA	NA	RP11-120D5.1	414399	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	11061735	11061767	11061751	Y	NA	NA	NA	NA	NA	NA	RP11-120D5.1	65494	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	11131962	11132102	11132014	Y	HCCS	RP11-120D5.1,HCCS	NA	NA	NA	NA	HCCS	4541	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	12968289	12968795	12968434	Y	TMSB4X,TLR7,TLR8	TMSB4X	NA	NA	NA	NA	TMSB4X	22432	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	12974184	12974672	12974538	Y	TMSB4X,TLR7,TLR8	TMSB4X	NA	NA	NA	NA	TMSB4X	16555	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	13709946	13709989	13709968	Y	RAB9A	TCEANC,RAB9A,TRAPPC2,OFD1	NA	NA	NA	NA	RAB9A	4702	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chrX	14262210	14262757	14262259	Y	NA	NA	NA	NA	NA	NA	GEMIN8	216198	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chrX	15469517	15469528	15469523	Y	NA	PIR	NA	NA	NA	NA	PIR	40159	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	16203717	16204054	16203956	Y	NA	RPL6P30	CTPS2	IMR90	Hi-C	24141950	RPL6P30	11358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	16805192	16805460	16805250	Y	TXLNG	TXLNG	NA	NA	NA	NA	TXLNG	2642	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	18530059	18530229	18530144	Y	NA	NA	NA	NA	NA	NA	CDKL5	88356	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	18693104	18693424	18693141	Y	PHKA2,CDKL5	NA	NA	NA	NA	NA	CDKL5	251401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chrX	18904688	18905149	18904995	Y	PHKA2	NA	NA	NA	NA	NA	PHKA2	95567	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.137398087010919
chrX	19360956	19361021	19360989	Y	NA	PDHA1	NA	NA	NA	NA	PDHA1	945	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chrX	19407416	19407434	19407425	Y	NA	PDHA1	NA	NA	NA	NA	PDHA1	47405	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	19742705	19742979	19742907	Y	SH3KBP1	NA	NA	NA	NA	NA	SH3KBP1	160740	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	19847836	19848081	19847959	Y	RPS6KA3,SH3KBP1	NA	NA	NA	NA	NA	SH3KBP1	55638	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	19893071	19893438	19893374	Y	NA	SH3KBP1	NA	NA	NA	NA	SH3KBP1	10281	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chrX	20154251	20154286	20154269	Y	NA	MAP7D2,EIF1AX	NA	NA	NA	NA	EIF1AX	3676	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	20281516	20281702	20281609	Y	SH3KBP1,SH3KBP1,RPS6KA3	RPS6KA3	NA	NA	NA	NA	RPS6KA3	1821	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.680579186975071
chrX	20283183	20283718	20283506	Y	SH3KBP1,RPS6KA3	NA	NA	NA	NA	NA	RPS6KA3	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.673345295902963
chrX	20534229	20534626	20534565	Y	NA	NA	NA	NA	NA	NA	RPS6KA3	250706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	21945015	21945333	21945248	Y	NA	SMS	SMS,MBTPS2	IMR90	Hi-C	24141950	SMS	11358	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	22013670	22013825	22013692	Y	NA	NA	NA	NA	NA	NA	SMS	56979	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chrX	23902825	23903036	23902985	Y	ZFX,ZFX,ZFX,ZFX,ACOT9,SAT1	APOO	NA	NA	NA	NA	APOO	21021	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	24044003	24044417	24044292	Y	ZFX,ZFX,ZFX,ZFX,PDK3,ACOT9,SAT1	EIF2S3	NA	NA	NA	NA	EIF2S3	26416	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	24187705	24188069	24187889	Y	NA	ZFX	NA	NA	NA	NA	ZFX	22415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	25664451	25664736	25664645	Y	MAGEB18	NA	NA	NA	NA	NA	POLA1	954415	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chrX	30646047	30646125	30646067	Y	GK,CXorf21	FTLP2,GK	NA	NA	NA	NA	FTLP2	290	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chrX	30661335	30661949	30661775	Y	NA	FTLP2,GK	GK	IMR90	Hi-C	24141950	GK	7527	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.096474514101206
chrX	30667899	30668468	30668243	Y	NA	FTLP2,GK	NA	NA	NA	NA	GK	1008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chrX	30674217	30674586	30674241	Y	NA	FTLP2,GK	NA	NA	NA	NA	GK	4741	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	30675885	30676221	30676093	Y	CXorf21,GK	FTLP2,GK	NA	NA	NA	NA	GK	6409	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	30676806	30676985	30676878	Y	CXorf21,GK	FTLP2,GK	NA	NA	NA	NA	GK	7330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	30679380	30679764	30679404	Y	NA	FTLP2,GK	NA	NA	NA	NA	GK	9904	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chrX	30717069	30717144	30717107	Y	CXorf21,GK	GK	NA	NA	NA	NA	GK	47593	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	36981340	36981727	36981708	Y	PRRG1,PRRG1	NA	NA	NA	NA	NA	PRRG1	224801	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	38134878	38135257	38135079	Y	CYBB,RPGR	RPGR	NA	NA	NA	NA	RPGR	49560	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	38206429	38206721	38206558	Y	MID1IP1,RPGR	RPGR,OTC	NA	NA	NA	NA	OTC	3077	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	38338792	38338989	38338897	Y	NA	NA	NA	NA	NA	NA	TSPAN7	79634	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	39614973	39615267	39615108	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	30123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	39646201	39646652	39646229	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	811	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.15416287905734
chrX	39680161	39680842	39680511	Y	NA	GAPDHP1	NA	NA	NA	NA	GAPDHP1	34771	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	39871700	39871985	39871950	Y	BCOR,BCOR	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	162597	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.30799422968717
chrX	39872499	39873023	39872596	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	161559	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.26188389083648
chrX	39873339	39874259	39873676	Y	NA	NA	BCOR	MCF7,K562	ChIA-PET	22265404	BCOR	160323	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.534141313554913
chrX	39951266	39951579	39951437	Y	NA	NA	NA	NA	NA	NA	BCOR	83003	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	39953769	39954197	39953849	Y	BCOR	NA	NA	NA	NA	NA	BCOR	80385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	39958407	39958722	39958627	Y	NA	NA	NA	NA	NA	NA	BCOR	75860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chrX	39963931	39964200	39963990	Y	BCOR	NA	NA	NA	NA	NA	BCOR	70382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chrX	39964528	39964690	39964611	Y	BCOR	NA	NA	NA	NA	NA	BCOR	69892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chrX	39964938	39965503	39965246	Y	NA	NA	NA	NA	NA	NA	BCOR	69079	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.196891835696984
chrX	39965558	39965902	39965820	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	68680	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.73530748517398
chrX	39968308	39968728	39968376	Y	BCOR	NA	NA	NA	NA	NA	BCOR	65854	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.280384267501579
chrX	39968932	39969265	39969200	Y	BCOR	NA	NA	NA	NA	NA	BCOR	65317	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.163693780031653
chrX	40005202	40005365	40005305	Y	NA	BCOR	NA	NA	NA	NA	BCOR	29217	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chrX	40014046	40014813	40014331	Y	BCOR	BCOR	NA	NA	NA	NA	BCOR	19769	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.331661384378189
chrX	40015911	40016135	40015987	Y	NA	BCOR	NA	NA	NA	NA	BCOR	18447	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chrX	40016662	40016910	40016734	Y	NA	BCOR	NA	NA	NA	NA	BCOR	17672	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	40017598	40017727	40017669	Y	NA	BCOR	NA	NA	NA	NA	BCOR	16855	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chrX	40028554	40028949	40028781	Y	NA	BCOR	NA	NA	NA	NA	BCOR	5633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	40030956	40031200	40030978	Y	BCOR,CXorf38,ATP6AP2	BCOR	NA	NA	NA	NA	BCOR	3382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	40032962	40033837	40033453	Y	BCOR,CXorf38,BCOR	BCOR	NA	NA	NA	NA	BCOR	745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.572927974307185
chrX	40034377	40034649	40034428	Y	BCOR,BCOR	NA	NA	NA	NA	NA	BCOR	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chrX	40034694	40035505	40035056	Y	BCOR,CXorf38,ATP6AP2,BCOR	BCOR	NA	NA	NA	NA	BCOR	112	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.840490257256914
chrX	40869399	40869667	40869505	Y	USP9X,ATP6AP2,CXorf38,MED14	NA	MED14,USP9X	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP9X	73221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	40869896	40870061	40869955	Y	ATP6AP2	NA	MED14,USP9X	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	USP9X	72827	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.183909753400373
chrX	40943673	40944218	40943773	Y	CXorf38,MED14,DDX3X,USP9X	USP9X	NA	NA	NA	NA	USP9X	785	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chrX	41182589	41182765	41182693	Y	NA	DDX3X	DDX3X	IMR90,MCF7,K562	Hi-C,ChIA-PET	24141950,22265404	DDX3X	7886	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	41242516	41242827	41242698	Y	DDX3X	NA	DDX3X,USP9X	MCF7,K562,IMR90	ChIA-PET,Hi-C	22265404,24141950	DDX3X	51865	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	41335242	41335481	41335291	Y	NA	NA	NA	NA	NA	NA	DDX3X	144591	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	41480372	41480697	41480463	Y	NA	NA	NA	NA	NA	NA	DDX3X	289721	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	41538171	41538545	41538500	Y	CASK	NA	NA	NA	NA	NA	CASK	242171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	41594711	41594837	41594774	Y	NA	NA	NA	NA	NA	NA	CASK	185879	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	41759638	41759871	41759773	Y	NA	CASK	NA	NA	NA	NA	CASK	20845	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	41780048	41780299	41780162	Y	CASK	CASK	NA	NA	NA	NA	CASK	417	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	43562549	43562948	43562749	Y	MAOA	MAOA	NA	NA	NA	NA	MAOA	49082	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	43579100	43579475	43579156	Y	NA	NA	NA	NA	NA	NA	MAOA	65633	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	43888590	43889088	43888779	Y	EFHC2	NA	NA	NA	NA	NA	MAOB	148897	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.485492735008018
chrX	44168721	44168911	44168853	Y	NA	NA	NA	NA	NA	NA	FUNDC1	231336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.267070656777457
chrX	44733657	44734406	44734027	Y	KDM6A	KDM6A	NA	NA	NA	NA	KDM6A	2900	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	44774748	44775132	44774822	Y	NA	KDM6A	NA	NA	NA	NA	KDM6A	43991	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	44834978	44835378	44835063	Y	NA	NA	NA	NA	NA	NA	KDM6A	104221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.093023332778907
chrX	45241202	45241396	45241250	Y	NA	NA	NA	NA	NA	NA	MIR221	362298	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chrX	45374628	45375077	45374937	Y	NA	NA	MIR221,MIR222	IMR90	Hi-C	24141950	MIR221	228617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	45626471	45627108	45626806	Y	NA	MIR221,MIR222	MIR222,MIR221	IMR90	Hi-C	24141950	MIR222	21941	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	45666628	45666834	45666726	Y	NA	RP5-1158E12.3	NA	NA	NA	NA	RP5-1158E12.3	42086	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	45702877	45703292	45703236	Y	NA	RP5-1158E12.3	NA	NA	NA	NA	RP5-1158E12.3	5628	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chrX	46125056	46125409	46125233	Y	NA	NA	NA	NA	NA	NA	RP1-30G7.2	59671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	46148096	46148185	46148140	Y	NA	RP1-30G7.2	NA	NA	NA	NA	RP1-30G7.2	36895	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	46182516	46182747	46182636	Y	NA	RP1-30G7.2	NA	NA	NA	NA	RP1-30G7.2	2333	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	46278987	46279293	46279130	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18856	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chrX	46316161	46316444	46316394	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18012	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	46316672	46316948	46316811	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	18523	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	46338861	46339028	46338937	Y	NA	GAPDHP65	NA	NA	NA	NA	GAPDHP65	40712	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chrX	46435390	46435934	46435628	Y	RP2,ZNF674,CHST7	ZNF674,CHST7	NA	NA	NA	NA	CHST7	4171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	46495805	46496079	46496076	Y	NA	NA	NA	NA	NA	NA	CHST7	64586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	46724768	46724961	46724901	Y	NA	RP2	NA	NA	NA	NA	RP2	30393	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	46773328	46773680	46773526	Y	NA	NA	NA	NA	NA	NA	RP2	78953	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.140849268333218
chrX	47016809	47017199	47017004	Y	NA	RBM10,NDUFB11,UBA1	NA	NA	NA	NA	NDUFB11	13906	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	47382833	47383145	47382966	Y	SYN1,SPACA5,CFP,CFP	ZNF41,ARAF	UBA1,ZNF41,USP11,CDK16	IMR90	Hi-C	24141950	ARAF	35371	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	47423323	47423681	47423373	Y	CDK16,CFP,CFP,ARAF	ARAF,TIMP1	NA	NA	NA	NA	ARAF	4807	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	47701110	47701161	47701136	Y	NA	ZNF81	NA	NA	NA	NA	ZNF81	6809	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	48571549	48571765	48571661	Y	NA	SUV39H1,GLOD5	NA	NA	NA	NA	SUV39H1	19604	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.674167938895547
chrX	48571837	48572283	48571996	Y	TBC1D25,PQBP1,PIM2,OTUD5,GRIPAP1	SUV39H1,GLOD5	NA	NA	NA	NA	SUV39H1	19892	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chrX	48748167	48748450	48748403	Y	NA	PQBP1,TIMM17B,SLC35A2,PIM2	NA	NA	NA	NA	PQBP1	4745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	48938465	48938570	48938518	Y	NA	TFE3,CCDC120,PRAF2,WDR45,GPKOW	NA	NA	NA	NA	PRAF2	8735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	49166036	49166254	49166148	Y	NA	PPP1R3F	NA	NA	NA	NA	PPP1R3F	41730	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	52004971	52005124	52005057	Y	NA	NA	NA	NA	NA	NA	MAGED1	460868	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.064590727600732
chrX	52949996	52950343	52950129	Y	TSPYL2,KDM5C,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	31660	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169773499683666
chrX	52964244	52964539	52964367	Y	TSPYL2,KDM5C,IQSEC2,FAM156A	FAM156B	NA	NA	NA	NA	FAM156B	45908	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.11479480510648
chrX	53155305	53155690	53155322	Y	XAGE5,FAM156A,FAM156B,FAM156A,GPR173,IQSEC2,TSPYL2	TSPYL2,LINC01155	KDM5C	IMR90	Hi-C	24141950	LINC01155	33978	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chrX	53428419	53428681	53428625	Y	NA	SMC1A,HSD17B10	NA	NA	NA	NA	SMC1A	18996	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	53468564	53468782	53468716	Y	IQSEC2	SMC1A,HSD17B10	NA	NA	NA	NA	HSD17B10	9244	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0693561780878883
chrX	54207583	54207867	54207725	Y	NA	NA	NA	NA	NA	NA	FAM120C	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	54665732	54666388	54666226	Y	NA	NA	ITIH6,MAGED2	MCF7	ChIA-PET	22265404	GNL3L	111088	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	56269843	56269989	56269918	Y	NA	NA	NA	NA	NA	NA	UBQLN2	318037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	56830107	56830267	56830196	Y	NA	NA	NA	NA	NA	NA	UQCRBP1	68097	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	57420009	57420263	57420031	Y	NA	NA	NA	NA	NA	NA	FAAH2	108870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chrX	57421884	57422193	57422039	Y	FAAH2	NA	NA	NA	NA	NA	FAAH2	110745	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0741216285750447
chrX	57490949	57491197	57490977	Y	NA	NA	NA	NA	NA	NA	ZXDB	125072	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	58292059	58292236	58292148	Y	NA	NA	NA	NA	NA	NA	KRT8P17	282939	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	64250587	64250887	64250722	Y	ZC4H2	ZC4H2	NA	NA	NA	NA	ZC4H2	1706	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	64255385	64255512	64255449	Y	ZC4H2	ZC4H2	NA	NA	NA	NA	ZC4H2	2792	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	64520324	64520642	64520384	Y	NA	NA	NA	NA	NA	NA	LAS1L	232013	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chrX	64888338	64888720	64888577	Y	MSN	NA	NA	NA	NA	NA	LAS1L	135683	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	67291116	67291490	67291298	Y	NA	NA	NA	NA	NA	NA	OPHN1	360265	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chrX	67728770	67728923	67728861	Y	NA	YIPF6	NA	NA	NA	NA	YIPF6	12605	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	68004355	68004677	68004478	Y	NA	SERBP1P1,EFNB1	NA	NA	NA	NA	SERBP1P1	3040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.827176646532792
chrX	68776201	68776510	68776416	Y	NA	NA	NA	NA	NA	NA	EDA	57401	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	68851851	68852116	68851941	Y	PJA1,EDA	EDA	NA	NA	NA	NA	EDA	17940	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chrX	69386644	69386665	69386655	Y	NA	IGBP1	NA	NA	NA	NA	IGBP1	35345	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	69653784	69653948	69653832	Y	NA	GDPD2,DLG3	NA	NA	NA	NA	DLG3	8763	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.117182113642199
chrX	69654278	69654566	69654417	Y	DLG3	GDPD2,DLG3	NA	NA	NA	NA	DLG3	8145	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chrX	70275409	70275661	70275633	Y	NA	RNU1-56P,SNX12,FOXO4	NA	NA	NA	NA	SNX12	10612	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.128849926773953
chrX	70401853	70402134	70401993	Y	IL2RG,MED12,TAF1,OGT,CXCR3,NONO	GJB1	NA	NA	NA	NA	GJB1	30910	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.394115199821479
chrX	70415917	70416007	70415951	Y	IL2RG,MED12,TAF1,CXCR3	GJB1	NA	NA	NA	NA	GJB1	17037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	70640504	70640913	70640718	Y	NA	NA	NA	NA	NA	NA	TAF1	56390	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.223187528717718
chrX	71402877	71403170	71402921	Y	NA	PIN4	NA	NA	NA	NA	PIN4	3674	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297
chrX	71761722	71762003	71761864	Y	NA	HDAC8	NA	NA	NA	NA	HDAC8	28950	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	73250242	73250558	73250399	Y	NA	RP13-36G14.3	NA	NA	NA	NA	RP13-36G14.3	33360	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	73340869	73341139	73340910	Y	RLIM	NA	NA	NA	NA	NA	USMG5P1	50586	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	73350281	73350820	73350789	Y	RLIM	USMG5P1	JPX	IMR90	Hi-C	24141950	USMG5P1	40905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chrX	73507125	73507445	73507287	Y	NA	FTX	NA	NA	NA	NA	FTX	3964	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chrX	73510244	73510542	73510484	Y	RLIM	FTX	NA	NA	NA	NA	FTX	867	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	73833460	73833840	73833652	Y	NA	RLIM	NA	NA	NA	NA	RLIM	1008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	74143243	74143469	74143354	Y	KIAA2022	NA	NA	NA	NA	NA	ABCB7	231098	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	74143858	74143903	74143869	Y	KIAA2022	NA	NA	NA	NA	NA	ABCB7	230664	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	74259170	74259182	74259176	Y	NA	NA	NA	NA	NA	NA	ABCB7	115385	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	74370869	74370931	74370900	Y	NA	ABCB7	NA	NA	NA	NA	ABCB7	3636	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	74960822	74961039	74960972	Y	NA	TTC3P1	NA	NA	NA	NA	TTC3P1	3710	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chrX	75368142	75368530	75368366	Y	NA	NA	NA	NA	NA	NA	MAGEE1	277516	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	77226253	77226302	77226278	Y	NA	NA	NA	NA	NA	NA	ATP7A	62059	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	77306835	77307068	77306952	Y	NA	PGK1	NA	NA	NA	NA	PGK1	11617	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	79827525	79827860	79827693	Y	NA	NA	NA	NA	NA	NA	BRWD3	235327	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.13394690568862
chrX	79828855	79829064	79828956	Y	NA	NA	NA	NA	NA	NA	BRWD3	234123	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.147751630977816
chrX	79830053	79830147	79830110	Y	NA	NA	NA	NA	NA	NA	BRWD3	233040	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chrX	79965324	79965547	79965436	Y	BRWD3	NA	NA	NA	NA	NA	BRWD3	97640	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	85280770	85281145	85280958	Y	CHM	CHM	NA	NA	NA	NA	CHM	19421	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0499628477117523
chrX	85294512	85294785	85294645	Y	CHM	CHM	NA	NA	NA	NA	CHM	5781	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chrX	85339971	85340972	85340615	Y	NA	CHM	NA	NA	NA	NA	CHM	39405	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.24676438477522
chrX	86520625	86520739	86520681	Y	NA	NA	NA	NA	NA	NA	RP3-452M16.1	829487	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	86664443	86664822	86664622	Y	NA	NA	NA	NA	NA	NA	RP3-452M16.1	685404	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	93615949	93615975	93615962	Y	NA	NA	NA	NA	NA	NA	NAP1L3	689382	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	95228939	95229189	95229110	Y	NA	NA	NA	NA	NA	NA	CALM1P1	476336	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	96701855	96702106	96701982	Y	NA	NA	NA	NA	NA	NA	DIAPH2	764193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	100111421	100111452	100111441	Y	NA	CSTF2	NA	NA	NA	NA	CSTF2	38037	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.167144961353952
chrX	100664036	100664412	100664274	Y	NA	RPL36A,GLA,HNRNPH2,ARMCX4	NA	NA	NA	NA	HNRNPH2	2753	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	100792680	100793554	100793013	Y	NA	NA	NA	NA	NA	NA	ARMCX6	77437	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0977887832660633
chrX	101914784	101914936	101914847	Y	BHLHB9,GPRASP1,GPRASP1	NA	NA	NA	NA	NA	GPRASP2	50168	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.828821932517962
chrX	103570216	103570358	103570287	Y	NA	NA	NA	NA	NA	NA	FAM199X	160915	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	105251831	105252182	105252005	Y	NA	SERPINA7	NA	NA	NA	NA	SERPINA7	28547	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.6860774934285
chrX	106448636	106449011	106448824	Y	NA	NUP62CL	NA	NA	NA	NA	NUP62CL	966	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	106595667	106595822	106595802	Y	NA	NA	NA	NA	NA	NA	NUP62CL	147997	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.690110087949384
chrX	106693156	106693529	106693316	Y	NA	NA	NA	NA	NA	NA	PRPS1	176208	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chrX	106954265	106954667	106954451	Y	TSC22D3,TSC22D3,ATG4A	NA	NA	NA	NA	NA	TSC22D3	63905	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	108883543	108883897	108883721	Y	NA	NA	NA	NA	NA	NA	ACSL4	90735	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.351054714754325
chrX	108983045	108983491	108983273	Y	TMEM164,TMEM164,NXT2,NXT2	ACSL4	ACSL4	K562	ChIA-PET	22265404	ACSL4	8413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.150380169307531
chrX	109017803	109018393	109018148	Y	NA	ACSL4	NA	NA	NA	NA	ACSL4	43171	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chrX	109073937	109074572	109074260	Y	NXT2,NXT2	NA	ACSL4	IMR90	Hi-C	24141950	ACSL4	99305	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chrX	109091814	109092062	109091940	Y	NA	NA	ACSL4	IMR90,K562	Hi-C,ChIA-PET	24141950,22265404	ACSL4	117182	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0991030524309209
chrX	109429267	109429621	109429491	Y	AMMECR1	NA	NA	NA	NA	NA	TMEM164	185408	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	109487499	109487581	109487556	Y	AMMECR1	NA	NA	NA	NA	NA	AMMECR1	193880	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	110863259	110863845	110863518	Y	NA	EIF4BP7,ALG13	NA	NA	NA	NA	EIF4BP7	542	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	115004721	115004876	115004807	Y	NA	NA	NA	NA	NA	NA	EEF1GP5	69590	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.076258540732486
chrX	115238483	115238690	115238635	Y	NA	NA	NA	NA	NA	NA	EEF1GP5	303352	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	115239457	115239782	115239623	Y	NA	NA	NA	NA	NA	NA	EEF1GP5	304326	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0728073594101872
chrX	117858426	117858628	117858540	Y	DOCK11,LONRF3,IL13RA1	IL13RA1	IL13RA1	MCF7	ChIA-PET	22265404	IL13RA1	907	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	117864756	117865062	117865028	Y	DOCK11,LONRF3,IL13RA1	IL13RA1	NA	NA	NA	NA	IL13RA1	5221	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	119076607	119076872	119076702	Y	NKRF	NKAP	NA	NA	NA	NA	NKAP	872	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	119385485	119385791	119385733	Y	NA	NKAPP1,ZBTB33	NA	NA	NA	NA	ZBTB33	2878	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.29336634979819
chrX	119619980	119620335	119620161	Y	NA	LAMP2	LAMP2	K562	ChIA-PET	22265404	LAMP2	18760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	119883101	119883187	119883145	Y	NA	NA	NA	NA	NA	NA	C1GALT1C1	121096	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	119886658	119886814	119886790	Y	NA	NA	NA	NA	NA	NA	C1GALT1C1	124653	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.18760216451667
chrX	122898767	122899176	122898998	Y	NA	THOC2	NA	NA	NA	NA	THOC2	33861	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.127535657609096
chrX	123128662	123128935	123128809	Y	XIAP,XIAP,STAG2	STAG2	NA	NA	NA	NA	STAG2	36600	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	123351438	123351580	123351505	Y	SH2D1A	NA	NA	NA	NA	NA	STAG2	259376	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0525913860414673
chrX	125406399	125406559	125406479	Y	NA	NA	NA	NA	NA	NA	MTND4P24	198309	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	125556519	125556645	125556582	Y	NA	MTND4P24	NA	NA	NA	NA	MTND4P24	48223	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	125606277	125607115	125606755	Y	NA	MTND4P24	NA	NA	NA	NA	MTND4P24	1409	CAGE	HepG2 ENCODE	hg19	FANTOM5	5.15206661151179
chrX	128225148	128225423	128225251	Y	NA	NA	NA	NA	NA	NA	SMARCA1	430054	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0775728098973435
chrX	128656237	128656454	128656444	Y	NA	SMARCA1,OCRL	NA	NA	NA	NA	SMARCA1	760	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.896864353048192
chrX	128911334	128911515	128911430	Y	ELF4,ELF4,BCORL1,SASH3	XPNPEP2	NA	NA	NA	NA	XPNPEP2	40384	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrX	129065451	129065820	129065554	Y	NA	UTP14A,BCORL1	NA	NA	NA	NA	UTP14A	27354	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chrX	129066097	129066492	129066260	Y	NA	UTP14A,BCORL1	NA	NA	NA	NA	UTP14A	28000	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chrX	129118011	129118370	129118054	Y	NA	BCORL1	BCORL1,UTP14A	IMR90,K562,MCF7	Hi-C,ChIA-PET	24141950,22265404	BCORL1	4928	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chrX	129226171	129226435	129226352	Y	NA	ELF4	NA	NA	NA	NA	ELF4	16256	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.200674545446794
chrX	129245756	129246153	129246006	Y	NA	ELF4	NA	NA	NA	NA	ELF4	3065	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.169281873511393
chrX	129255072	129255259	129255158	Y	SASH3,ELF4,ELF4	ELF4,AIFM1,RAB33A	ELF4	K562	ChIA-PET	22265404	ELF4	12381	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	129400519	129400680	129400638	Y	NA	ZNF280C	NA	NA	NA	NA	ZNF280C	193	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.047825935554311
chrX	129982936	129983220	129983074	Y	NA	NA	NA	NA	NA	NA	ENOX2	51988	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	130942336	130942500	130942419	Y	NA	NA	NA	NA	NA	NA	MST4	212793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	130952432	130952771	130952603	Y	NA	NA	NA	NA	NA	NA	MST4	202522	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	131159301	131159695	131159439	Y	RAP2C,MBNL3,MST4,MST4	MST4	NA	NA	NA	NA	MST4	4008	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.111102393990186
chrX	131615038	131615178	131615106	Y	MST4,MST4,MBNL3	MBNL3	NA	NA	NA	NA	MBNL3	6818	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.171910411841108
chrX	131625337	131625543	131625484	Y	MBNL3	MBNL3	NA	NA	NA	NA	MBNL3	3341	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.734324744436634
chrX	132678168	132678604	132678343	Y	NA	NA	NA	NA	NA	NA	RP3-417G15.1	124395	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	132769856	132769864	132769860	Y	NA	RP3-417G15.1	NA	NA	NA	NA	RP3-417G15.1	33135	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0908864206214656
chrX	132780282	132780629	132780529	Y	NA	RP3-417G15.1	NA	NA	NA	NA	RP3-417G15.1	22370	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.144300449655517
chrX	132987009	132987182	132987097	Y	GPC3	NA	NA	NA	NA	NA	GPC3	130740	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.13813094297719
chrX	133121319	133121626	133121494	Y	GPC3	GPC3	NA	NA	NA	NA	GPC3	3397	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.913629145094612
chrX	133160063	133160287	133160179	Y	GPC3	GPC3	NA	NA	NA	NA	GPC3	42141	CAGE	HepG2 ENCODE	hg19	FANTOM5	1.04822726309307
chrX	133305762	133306165	133305903	Y	PHF6,CCDC160	NA	NA	NA	NA	NA	GPC3	187840	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	133952675	133952993	133952834	Y	NA	FAM122C,FAM122B	NA	NA	NA	NA	FAM122B	23413	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	134096434	134096824	134096629	Y	NA	MOSPD1	FAM127C	IMR90	Hi-C	24141950	MOSPD1	49137	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	134138094	134138444	134138243	Y	NA	FAM127A	NA	NA	NA	NA	FAM127A	25889	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0430604850671547
chrX	134718222	134718415	134718313	Y	NA	NA	NA	NA	NA	NA	ZNF449	241501	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0680419089230309
chrX	139858514	139858763	139858620	Y	NA	NA	NA	NA	NA	NA	LDOC1	410547	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	141121057	141121306	141121182	Y	NA	NA	NA	NA	NA	NA	LDOC1	851747	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	148684727	148685116	148684922	Y	NA	TMEM185A	NA	NA	NA	NA	TMEM185A	26452	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0465116663894535
chrX	149186886	149187270	149187078	Y	NA	NA	NA	NA	NA	NA	CXorf40B	81857	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	149201039	149201275	149201132	Y	NA	NA	NA	NA	NA	NA	CXorf40B	96010	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	149737740	149738101	149737940	Y	MTMR1,MTM1	MTM1	NA	NA	NA	NA	MTM1	2671	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.10255423375322
chrX	149863384	149863571	149863479	Y	NA	MTMR1	NA	NA	NA	NA	MTMR1	3949	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	149863588	149863865	149863755	Y	MTM1,MTMR1	MTMR1	NA	NA	NA	NA	MTMR1	4153	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	150152595	150153067	150152778	Y	NA	HMGB3,RPL19P21	NA	NA	NA	NA	HMGB3	5613	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.120633294964498
chrX	152127371	152127756	152127434	Y	NA	NA	NA	NA	NA	NA	NSDHL	129860	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0943376019437645
chrX	152753051	152753292	152753194	Y	NA	TREX2,BGN,HAUS7	BGN	MCF7	ChIA-PET	22265404	BGN	5105	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chrX	152889735	152890196	152889876	Y	DUSP9	FAM58A,DUSP9,RPL18AP16	ATP2B3,FAM58A,PNCK	IMR90,MCF7	Hi-C,ChIA-PET	24141950,22265404	DUSP9	15750	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.638501442645263
chrX	152893404	152893516	152893460	Y	ATP2B3,DUSP9	FAM58A,DUSP9,RPL18AP16	FAM58A	MCF7	ChIA-PET	22265404	DUSP9	12430	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.889298933548571
chrX	152951257	152951653	152951455	Y	NA	DUSP9,RPL18AP16,BCAP31,ABCD1	NA	NA	NA	NA	SLC6A8	0	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrX	152980497	152980777	152980637	Y	NA	SLC6A8,BCAP31,ABCD1,PLXNB3	NA	NA	NA	NA	BCAP31	7375	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	153144826	153145116	153145102	Y	NA	CYCSP45,L1CAM	NA	NA	NA	NA	L1CAM	27561	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	153304167	153304640	153304272	Y	ABCD1,ARHGAP4,RENBP,TEX28,TEX28,TAZ,MECP2,IKBKG,IKBKG,IKBKG,EMD,DNASE1L1,TMEM187,IRAK1	IRAK1	NA	NA	NA	NA	IRAK1	20736	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	153359354	153359823	153359622	Y	NA	MECP2	NA	NA	NA	NA	MECP2	1389	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	153596671	153598676	153598064	Y	NA	FLNA,EMD,RPL10,TAZ,DNASE1L1	NA	NA	NA	NA	FLNA	2330	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.413999644762688
chrX	153600469	153600779	153600667	Y	NA	FLNA,EMD,RPL10,TAZ,DNASE1L1	NA	NA	NA	NA	FLNA	227	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrX	153755432	153755621	153755566	Y	NA	LAGE3,UBL4A,SLC10A3,FAM3A,IKBKG,G6PD	FAM3A	MCF7,K562	ChIA-PET	22265404	IKBKG	11793	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.115867844477342
chrX	153771070	153771275	153771201	Y	IRAK1,MECP2,TEX28,TEX28,EMD,DNASE1L1,TAZ,ATP6AP1,F8A2,F8A1,LOC100132963,MPP1,GAB3,IKBKG,IKBKG,IKBKG	FAM3A,IKBKG,G6PD	NA	NA	NA	NA	G6PD	2512	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.12277020712194
chrX	153771434	153771677	153771549	Y	IRAK1,MECP2,TEX28,TEX28,EMD,DNASE1L1,TAZ,ATP6AP1,F8A2,F8A1,LOC100132963,MPP1,GAB3,IKBKG,IKBKG,IKBKG	FAM3A,IKBKG,G6PD	NA	NA	NA	NA	G6PD	2110	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0249814238558762
chrX	154256125	154256514	154256179	Y	IKBKG,IKBKG,IKBKG,GAB3,MPP1,LOC100132963,F8A1,F8A2	FUNDC2,BRCC3	NA	NA	NA	NA	FUNDC2	3870	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrY	7143028	7143486	7143308	Y	AMELY	PRKY	NA	NA	NA	NA	PRKY	3015	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0215302425335773
chrY	7144356	7144569	7144462	Y	NA	PRKY	NA	NA	NA	NA	PRKY	4343	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0262956930207336
chrY	7147506	7147599	7147553	Y	NA	PRKY	NA	NA	NA	NA	PRKY	7493	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.170596142676251
chrY	14775457	14775545	14775476	Y	NA	TTTY15	NA	NA	NA	NA	TTTY15	3192	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0512771168766098
chrY	15207344	15207441	15207401	Y	NA	NA	NA	NA	NA	NA	DDX3Y	193325	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.393783671393968
chrY	15547664	15548123	15547956	Y	TMSB4Y	NA	NA	NA	NA	NA	TMSB4Y	265324	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.112416663155043
chrY	28555183	28555400	28555298	Y	NA	NA	NA	NA	NA	NA	EIF1AY	5819572	CAGE	HepG2 ENCODE	hg19	FANTOM5	0.0714930902453297